BLASTX nr result
ID: Mentha27_contig00049600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00049600
(245 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 57 2e-11
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 74 3e-11
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e... 56 7e-11
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 57 2e-10
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 55 2e-10
emb|CAN78017.1| hypothetical protein VITISV_002922 [Vitis vinifera] 58 4e-10
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 55 5e-10
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 55 1e-09
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 68 1e-09
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 56 1e-09
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 51 2e-09
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 67 2e-09
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 55 3e-09
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 55 3e-09
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 52 3e-09
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 67 3e-09
dbj|BAB83583.1| reverse trasnscriptase [Silene noctiflora] 55 4e-09
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 66 6e-09
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 51 9e-09
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 51 9e-09
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+LEE +YM QPEG+ + VCKL RSI+
Sbjct: 548 EIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIY 592
Score = 37.7 bits (86), Expect(2) = 2e-11
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F D + E CVYKK
Sbjct: 592 YGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKK 626
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIWT*ASILVLEHTFF-E 67
EIW MDVKI F NGSL+E IYM QPEG+I +HL+CKL RSI+ +T F +
Sbjct: 1198 EIWQMDVKIAFLNGSLDECIYMKQPEGFITNGQEHLLCKLNRSIYGLKQTSRSWNTCFDQ 1257
Query: 66 VIQSYGFSQCDQRKLCV*K 10
I+++GF QC CV K
Sbjct: 1258 TIKTFGFDQCHDES-CVYK 1275
>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 566
Score = 55.8 bits (133), Expect(2) = 7e-11
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK+ F NG+L E +YM QPE ++ K+ VCKL +SI+
Sbjct: 362 EIWQMDVKMAFLNGNLSEDVYMTQPESFVDLKEARKVCKLNKSIY 406
Score = 36.6 bits (83), Expect(2) = 7e-11
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F D + E CVYKK
Sbjct: 406 YGLKQASRSWNIRFDEVVKGFDFIKNEEEPCVYKK 440
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 56.6 bits (135), Expect(2) = 2e-10
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVKI F NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 784 EIWQMDVKIAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 828
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + V + CVYKK
Sbjct: 828 YGLKQASRSWNIRFDEIVKALGFVKNEEDPCVYKK 862
>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
Length = 746
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 510 EIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 554
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKKCN 3
YGLKQAS SWN F V E CVYKK N
Sbjct: 554 YGLKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKIN 590
>emb|CAN78017.1| hypothetical protein VITISV_002922 [Vitis vinifera]
Length = 109
Score = 58.2 bits (139), Expect(2) = 4e-10
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -3
Query: 231 MDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
MDVK F NG LEE +YM QPEG+I + H+VCKLK+SI+
Sbjct: 1 MDVKTTFLNGDLEEEVYMKQPEGFITNGNDHIVCKLKKSIY 41
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS W F S D + + + C+Y K
Sbjct: 41 YGLKQASRQWYLKFHDVISSFDFIENVMDQCIYHK 75
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 54.7 bits (130), Expect(2) = 5e-10
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 686 EIWQMDVKTTFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 730
Score = 34.7 bits (78), Expect(2) = 5e-10
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + V E CVYKK
Sbjct: 730 YGLKQASRSWNIRFDEVVKALRFVKNEEEPCVYKK 764
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 55.5 bits (132), Expect(2) = 1e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG L E +YM QPEG++ + VCKL++SI+
Sbjct: 897 EIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKSIY 941
Score = 32.7 bits (73), Expect(2) = 1e-09
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F V E CVY K
Sbjct: 941 YGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMK 975
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIWT*ASILVLEHTFF-E 67
EIW MDVK F NGSL+E IYM Q EG+I +HL+CKL RSI+ +T F +
Sbjct: 216 EIWQMDVKTAFLNGSLDECIYMKQXEGFIXNGQEHLLCKLNRSIYGLKQASRSWNTCFDQ 275
Query: 66 VIQSYGFSQCDQRKLCV*K 10
I+++GF QC CV K
Sbjct: 276 TIKTFGFDQCHDES-CVYK 293
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L E +YM QPEG++ + VCKL++SI+
Sbjct: 481 EIWQMDVKTAFLNGNLHEDVYMTQPEGFVDPNNASKVCKLQKSIY 525
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + E CVY K
Sbjct: 525 YGLKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMK 559
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L+E +YM Q +G++ + +CKL +SI+
Sbjct: 610 EIWQMDVKTAFLNGNLDEDVYMTQSKGFVDPQSAKKICKLHKSIY 654
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKKCN 3
YGLKQAS SWN F + V E CVYKK N
Sbjct: 654 YGLKQASQSWNIRFDEVVKALVFVKNKEEPCVYKKIN 690
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIWT*ASILVLEHTFF-E 67
EIW MDVK F NGSL+E IYM Q EG+I +HL+CKL RSI+ +T F +
Sbjct: 894 EIWQMDVKTAFLNGSLDECIYMKQLEGFITNGQEHLLCKLNRSIYGLKQASRSWNTCFDQ 953
Query: 66 VIQSYGFSQC 37
I+++GF QC
Sbjct: 954 TIKTFGFDQC 963
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 824 EIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 868
Score = 32.3 bits (72), Expect(2) = 3e-09
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + V CVYKK
Sbjct: 868 YGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKK 902
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK F NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 766 EIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 810
Score = 32.3 bits (72), Expect(2) = 3e-09
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + V CVYKK
Sbjct: 810 YGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKK 844
>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 52.4 bits (124), Expect(2) = 3e-09
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW MDVK NG+L+E +YM QP+G++ + +CKL++SI+
Sbjct: 607 EIWQMDVKTALLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIY 651
Score = 34.3 bits (77), Expect(2) = 3e-09
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLK+AS SWN F + + V E CVYKK
Sbjct: 651 YGLKKASRSWNIRFDKVVKALGFVKNEEEPCVYKK 685
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIWT*ASILVLEHTFFE- 67
EIW MDVK F NG+LEESIYM QPEG+IA+ + VCKL++SI+ + F+
Sbjct: 911 EIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDT 970
Query: 66 VIQSYGFSQ 40
I+SYGF Q
Sbjct: 971 AIKSYGFEQ 979
>dbj|BAB83583.1| reverse trasnscriptase [Silene noctiflora]
Length = 92
Score = 55.1 bits (131), Expect(2) = 4e-09
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -3
Query: 231 MDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
MDVK F NG LEE +YM QPEG++ K+ + VCKLKRSI+
Sbjct: 2 MDVKTAFLNGFLEEEVYMTQPEGFVDPKNPNKVCKLKRSIY 42
Score = 31.6 bits (70), Expect(2) = 4e-09
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + E C+Y K
Sbjct: 42 YGLKQASRSWNNRFDHFIKQNGFSRSVEEPCLYMK 76
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIWT*ASILVLEHTFF-E 67
EIW MDVK F NG LEE+IYM QPEG++ + + VCKL+RSI+ + F E
Sbjct: 251 EIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNE 310
Query: 66 VIQSYGFSQ 40
I+SYGF Q
Sbjct: 311 AIKSYGFEQ 319
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 51.2 bits (121), Expect(2) = 9e-09
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW M+VK F NG+ +E +YM QP+G++ + ++CKL++SI+
Sbjct: 831 EIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIY 875
Score = 33.9 bits (76), Expect(2) = 9e-09
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + + E CVYKK
Sbjct: 875 YGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKK 909
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 51.2 bits (121), Expect(2) = 9e-09
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = -3
Query: 243 EIWLMDVKIIFSNGSLEESIYMHQPEGYIAEKDKHLVCKLKRSIW 109
EIW M+VK F NG+ +E +YM QP+G++ + ++CKL++SI+
Sbjct: 821 EIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIY 865
Score = 33.9 bits (76), Expect(2) = 9e-09
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 113 YGLKQASWSWNTHFLR*SSHMDLVNVIRESCVYKK 9
YGLKQAS SWN F + + E CVYKK
Sbjct: 865 YGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKK 899