BLASTX nr result

ID: Mentha27_contig00049550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00049550
         (290 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26377.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]    59   5e-07
ref|XP_003629614.1| Pentatricopeptide repeat-containing protein ...    58   2e-06
gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus...    56   4e-06

>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = -1

Query: 287 ELFSQMVNKGCLPDSTMYNVFVRGLVKRNKLHDAIRVLGEMNIRGFTLDTSSSSMVL 117
           +L  QM  KGCLPDS  +NV ++ L+K N++H+AI++L EM  R F+ D + +SM+L
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538


>emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = -1

Query: 287  ELFSQMVNKGCLPDSTMYNVFVRGLVKRNKLHDAIRVLGEMNIRGFTLDTSSSSMVL 117
            +L  QM  KGCLPDS  +NV ++ L+K N++H+AI++L EM  R F+ D + +SM+L
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477


>ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523636|gb|AET04090.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 592

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = -1

Query: 287 ELFSQMVNKGCLPDSTMYNVFVRGLVKRNKLHDAIRVLGEMNIRGFTLDTSSSSMVLQHL 108
           +L S M   GC+PDS  YNVFV+GLV   ++  +I+ L  M  +GF++D +++ M++ +L
Sbjct: 517 DLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576

Query: 107 S 105
           S
Sbjct: 577 S 577


>gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus guttatus]
          Length = 383

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 41/65 (63%)
 Frame = -1

Query: 287 ELFSQMVNKGCLPDSTMYNVFVRGLVKRNKLHDAIRVLGEMNIRGFTLDTSSSSMVLQHL 108
           +L  +M   GC P+S  YN  V+GL+K+ +++ AI  L EM+ RGF+ D ++SSM++  L
Sbjct: 304 DLIVKMERSGCAPNSVTYNYIVQGLLKKKEVYKAIPFLEEMHERGFSADAATSSMLISRL 363

Query: 107 SNVKK 93
               K
Sbjct: 364 QGSNK 368


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