BLASTX nr result

ID: Mentha27_contig00049422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00049422
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
emb|CBI40106.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]    58   1e-06
ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citr...    57   3e-06
ref|XP_007014404.1| Pentatricopeptide repeat superfamily protein...    57   3e-06
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,...    56   6e-06

>ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform 1 [Solanum lycopersicum]
           gi|460394471|ref|XP_004242826.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like isoform 2 [Solanum lycopersicum]
          Length = 590

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAMRSM*KVSL 182
           + L PV+TSPY+LLSNLYAS+ KWD V  ARK L+  GL+KE A  SLI+   S+ K ++
Sbjct: 500 LQLQPVSTSPYVLLSNLYASDEKWDSVAEARKMLKSCGLKKE-AGHSLIEVKGSVEKFTI 558

Query: 183 QFFFSS 200
             F +S
Sbjct: 559 GNFANS 564


>ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform X1 [Solanum tuberosum]
          Length = 590

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAMRSM*KVSL 182
           + L PV+TSPY+LLSNLYAS+ KW+ V  ARK L+  GL+KE A  SLI+   S+ K ++
Sbjct: 500 LQLQPVSTSPYVLLSNLYASDEKWNSVAEARKMLKSCGLKKE-AGHSLIEVKGSVEKFTI 558

Query: 183 QFFFSS 200
             F +S
Sbjct: 559 GNFANS 564


>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAMRSM*KVSL 182
           + L PV TSPY+LLSNLYAS+  WD V  ARK L+  GL+KE    SLI+   S+ K ++
Sbjct: 500 LKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGH-SLIEVNGSVEKFTI 558

Query: 183 QFF 191
             F
Sbjct: 559 GDF 561


>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAMRSM*KVSL 182
           + L PV TSPY+LLSNLYAS+  WD V  ARK L+  GL+KE    SLI+   S+ K ++
Sbjct: 500 LKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGH-SLIEVNGSVEKFTI 558

Query: 183 QFF 191
             F
Sbjct: 559 GDF 561


>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
          Length = 730

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAMRSM*KVSL 182
           + L PV TSPY+LLSNLYAS+  WD V  ARK L+  GL+KE    SLI+   S+ K ++
Sbjct: 468 LKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGH-SLIEVNGSVEKFTI 526

Query: 183 QFF 191
             F
Sbjct: 527 GDF 529


>ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
          Length = 589

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +3

Query: 6   HLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSL 146
           HL P  TSPY+LLSNLYAS+  W  V  ARK L+D GL+KE + S +
Sbjct: 501 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 547


>ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citrus clementina]
           gi|557556495|gb|ESR66509.1| hypothetical protein
           CICLE_v10010390mg [Citrus clementina]
          Length = 611

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +3

Query: 6   HLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSL 146
           HL P  TSPY+LLSNLYAS+  W  V  ARK L+D GL+KE + S +
Sbjct: 501 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 547


>ref|XP_007014404.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508784767|gb|EOY32023.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 589

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARS 140
           + L PV+TSPY+LLSNLYAS+  WD V  ARK L+  GL+KE   S
Sbjct: 500 LKLQPVSTSPYVLLSNLYASDEMWDCVAEARKMLKGSGLKKEAGYS 545


>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 589

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/52 (57%), Positives = 35/52 (67%)
 Frame = +3

Query: 3   IHLHPVATSPYILLSNLYASNMKWDGVLRARKSLEDRGLRKEVARSSLIDAM 158
           + L PV TSPY+LLSNLYAS+  W GV  A K L+  GL+KE    SLID M
Sbjct: 500 LKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGH-SLIDVM 550


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