BLASTX nr result
ID: Mentha27_contig00049088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00049088
(237 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU25083.1| hypothetical protein MIMGU_mgv1a000622mg [Mimulus... 76 4e-12
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 75 1e-11
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 73 5e-11
emb|CBI31781.3| unnamed protein product [Vitis vinifera] 73 5e-11
ref|XP_007218906.1| hypothetical protein PRUPE_ppa000560mg [Prun... 72 6e-11
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 71 2e-10
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 66 6e-09
ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citr... 65 1e-08
ref|XP_007038669.1| DNA mismatch repair protein MSH3 isoform 2, ... 65 1e-08
ref|XP_007038668.1| DNA mismatch repair protein MSH3 isoform 1 [... 65 1e-08
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 64 2e-08
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 62 8e-08
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 61 1e-07
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 61 1e-07
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-... 60 3e-07
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-... 60 3e-07
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr... 57 4e-06
ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [A... 55 8e-06
>gb|EYU25083.1| hypothetical protein MIMGU_mgv1a000622mg [Mimulus guttatus]
Length = 1042
Score = 76.3 bits (186), Expect = 4e-12
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTAT SEFIAV+QA+LVAGRQL +L ++E+ + +GR+VRSVLLRK
Sbjct: 501 FHRTATASEFIAVIQAILVAGRQLCKLDVELEDDKKNPQGRTVRSVLLRKSISTASSSSV 560
Query: 182 XXXXXRLVSKLNKEAAER 235
L+SKLNKEAA++
Sbjct: 561 IKSAASLLSKLNKEAADK 578
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 75.1 bits (183), Expect = 1e-11
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTAT SEFIAV+QA+L+AG+QL RL + E N ++ ++VRSVLL+K+
Sbjct: 538 FHRTATASEFIAVIQAILIAGKQLRRLQIEEEQNNKRVQAKTVRSVLLKKLILTVSSSSV 597
Query: 182 XXXXXRLVSKLNKEAAE 232
+L+S LNKEAAE
Sbjct: 598 VGHAAKLLSTLNKEAAE 614
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKG--RSVRSVLLRKVXXXXXXX 175
FHRTAT SEFI+V QA+L AG+QL RLH +E ++ D KG RSVRSVLLRK+
Sbjct: 547 FHRTATASEFISVTQAILFAGKQLQRLH--IEEKDVDEKGQSRSVRSVLLRKLILTASSS 604
Query: 176 XXXXXXXRLVSKLNKEAAER 235
+L+S LNKEAA++
Sbjct: 605 GIIGNAAKLLSTLNKEAADK 624
>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
Length = 903
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKG--RSVRSVLLRKVXXXXXXX 175
FHRTAT SEFI+V QA+L AG+QL RLH +E ++ D KG RSVRSVLLRK+
Sbjct: 407 FHRTATASEFISVTQAILFAGKQLQRLH--IEEKDVDEKGQSRSVRSVLLRKLILTASSS 464
Query: 176 XXXXXXXRLVSKLNKEAAER 235
+L+S LNKEAA++
Sbjct: 465 GIIGNAAKLLSTLNKEAADK 484
>ref|XP_007218906.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
gi|462415368|gb|EMJ20105.1| hypothetical protein
PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHD---DVENRNNDLKGRSVRSVLLRKVXXXXXX 172
FHRTATPSEFIAV+QA+L AG+QL +L + E +L+G++VRS LLRK+
Sbjct: 529 FHRTATPSEFIAVIQAILYAGKQLQQLQQLQIEEEGSKENLRGKTVRSDLLRKLICTASS 588
Query: 173 XXXXXXXXRLVSKLNKEAAER 235
RL+S LNKEAA++
Sbjct: 589 STVIGNAARLLSTLNKEAADK 609
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTATPSEFIAV+QA+L AG+QL +L D E L G++V S LLRK+
Sbjct: 540 FHRTATPSEFIAVIQAILHAGKQLQQLQIDEEGSGKTLGGKAVCSELLRKLILTASSSSI 599
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S LNKEAA++
Sbjct: 600 IGNAAKLLSTLNKEAADQ 617
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNND----LKGRSVRSVLLRKVXXXXX 169
FHRT TP+EFIAV+QA+L AG+QL +LH++ E + + + VRS LLRK+
Sbjct: 525 FHRTTTPTEFIAVIQAILYAGKQLQQLHNEEEEEEEEGDGKFRAKIVRSELLRKLILTAS 584
Query: 170 XXXXXXXXXRLVSKLNKEAAER 235
+L+S LN EAA++
Sbjct: 585 SPTVIRNAAKLLSSLNNEAADQ 606
>ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citrus clementina]
gi|557523774|gb|ESR35141.1| hypothetical protein
CICLE_v10004302mg [Citrus clementina]
Length = 853
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/78 (44%), Positives = 51/78 (65%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTATPSEFIAV+QA+L AG+QL +LH D E R + +++ S LL+++
Sbjct: 527 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK-VTSKTLHSALLKRLILTASSPAV 585
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S +NKEAA++
Sbjct: 586 IGKAAKLLSTVNKEAADQ 603
>ref|XP_007038669.1| DNA mismatch repair protein MSH3 isoform 2, partial [Theobroma
cacao] gi|508775914|gb|EOY23170.1| DNA mismatch repair
protein MSH3 isoform 2, partial [Theobroma cacao]
Length = 861
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNN---DLKGRSVRSVLLRKVXXXXXX 172
FHRTATP+EFIAV++A+L AG+QL RLH D E+ +N ++ V+S LL+++
Sbjct: 551 FHRTATPAEFIAVIKAILSAGKQLQRLHIDEEHEDNCSKKVRVGIVQSALLKRLILTASS 610
Query: 173 XXXXXXXXRLVSKLNKEAAER 235
+L+S LNKEAA++
Sbjct: 611 SNVLGNAAKLLSFLNKEAADK 631
>ref|XP_007038668.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
gi|508775913|gb|EOY23169.1| DNA mismatch repair protein
MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNN---DLKGRSVRSVLLRKVXXXXXX 172
FHRTATP+EFIAV++A+L AG+QL RLH D E+ +N ++ V+S LL+++
Sbjct: 551 FHRTATPAEFIAVIKAILSAGKQLQRLHIDEEHEDNCSKKVRVGIVQSALLKRLILTASS 610
Query: 173 XXXXXXXXRLVSKLNKEAAER 235
+L+S LNKEAA++
Sbjct: 611 SNVLGNAAKLLSFLNKEAADK 631
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHR AT +EFIAV+QA+L+A +QL RL E+R+ +L+ ++ SVLLRK+
Sbjct: 549 FHRKATAAEFIAVIQAILIAAKQLQRLF-ITEDRSTNLQRETLHSVLLRKLISIASSSTV 607
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S LNKEAA+R
Sbjct: 608 INGAAKLLSALNKEAADR 625
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTATPSEFIAV+QA+L AG+QL +L D E R + +++ S LL+++
Sbjct: 527 FHRTATPSEFIAVMQAILYAGKQLQQLQIDGEYREK-VTSKTLHSALLKRLILTASSPAV 585
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S +NKEAA++
Sbjct: 586 IGKAAKLLSTVNKEAADQ 603
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
tuberosum]
Length = 1117
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHR AT +EFIAV+QA+L+A +QL +L +E+++ +L ++ SVLLRK+
Sbjct: 549 FHRKATAAEFIAVIQAILIAAKQLQQL-CIIEDKSTNLPRETLHSVLLRKLISIASSSTV 607
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S LNKEAA+R
Sbjct: 608 INGAAKLLSALNKEAADR 625
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTA +EFIAV++A+L+AG+Q+ RL ++ ++ +VRS LLRK+
Sbjct: 540 FHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVV 599
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S LNKEAA R
Sbjct: 600 VDNAGKLLSALNKEAAVR 617
>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTA PSEFIAV+QA+L AG+QL + H D E+ N + + S LLRK+
Sbjct: 565 FHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSES-IIGSKLLRKLILSASSSGL 623
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S ++KEAA++
Sbjct: 624 INIAAKLLSTISKEAADQ 641
>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTA PSEFIAV+QA+L AG+QL + H D E+ N + + S LLRK+
Sbjct: 548 FHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSES-IIGSKLLRKLILSASSSGL 606
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S ++KEAA++
Sbjct: 607 INIAAKLLSTISKEAADQ 624
>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
gi|557114467|gb|ESQ54750.1| hypothetical protein
EUTSA_v10024274mg [Eutrema salsugineum]
Length = 1088
Score = 56.6 bits (135), Expect = 4e-06
Identities = 32/78 (41%), Positives = 45/78 (57%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTA +EFIAV++A+L+AG+QL RL + ++ +VRS LLRK+
Sbjct: 532 FHRTAKAAEFIAVIEAILLAGKQLQRLGIKQDCELKSMQSATVRSSLLRKLISVVSSPAV 591
Query: 182 XXXXXRLVSKLNKEAAER 235
+L+S LNKE R
Sbjct: 592 VDNAAKLLSGLNKEGVVR 609
>ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [Amborella trichopoda]
gi|548832331|gb|ERM95127.1| hypothetical protein
AMTR_s00009p00259730 [Amborella trichopoda]
Length = 1092
Score = 55.5 bits (132), Expect = 8e-06
Identities = 35/77 (45%), Positives = 46/77 (59%)
Frame = +2
Query: 2 FHRTATPSEFIAVVQALLVAGRQLHRLHDDVENRNNDLKGRSVRSVLLRKVXXXXXXXXX 181
FHRTATP EFIAV+ ALL A +QL RL D+ +N+ S RS LLR++
Sbjct: 548 FHRTATPKEFIAVIHALLCASKQLQRL--DLGEESNE-GPTSPRSDLLRRLILTASSLKV 604
Query: 182 XXXXXRLVSKLNKEAAE 232
+L+S LNK+AA+
Sbjct: 605 TSHAAKLLSALNKDAAD 621