BLASTX nr result
ID: Mentha27_contig00049012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00049012
(232 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 93 4e-17
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 89 6e-16
gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi... 88 1e-15
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 88 1e-15
emb|CAN64561.1| hypothetical protein VITISV_038232 [Vitis vinifera] 84 3e-14
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 83 4e-14
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 83 4e-14
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 83 4e-14
emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thal... 83 5e-14
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc... 82 8e-14
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 81 1e-13
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group] 81 1e-13
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 81 1e-13
emb|CAN71173.1| hypothetical protein VITISV_037664 [Vitis vinifera] 81 2e-13
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 81 2e-13
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 80 2e-13
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 80 3e-13
gb|AAB82754.1| retrofit [Oryza longistaminata] 80 3e-13
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 80 3e-13
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 80 3e-13
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 92.8 bits (229), Expect = 4e-17
Identities = 49/77 (63%), Positives = 54/77 (70%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S L QRKYITDLL +H+MLD KPV TPMS T KL L G+ DA+ YR L
Sbjct: 1153 EATRTSRGLHLMQRKYITDLLKKHNMLDTKPVSTPMSPTPKLSLLSGTALDDATEYRTVL 1212
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIA+AV
Sbjct: 1213 GSLQYLAFTRPDIAFAV 1229
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R + L QRKY+TDLL++H+MLDAKPV TP+ ++ KL L G+ DAS YR +
Sbjct: 1183 EATRTNTGLHLMQRKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVV 1242
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIA+AV
Sbjct: 1243 GSLQYLAFTRPDIAFAV 1259
>gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 387
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R + L QRKYITDLL++ HMLDAKP+ TPM++T KL L G+ DA YR +
Sbjct: 111 EATRTKKGLHLMQRKYITDLLAKTHMLDAKPISTPMATTPKLSLHSGTILDDAKEYRMII 170
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIA+ V
Sbjct: 171 GSLQYLSFTRPDIAFVV 187
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 87.8 bits (216), Expect = 1e-15
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R + L QRKYI DLL++H+M DAKPV TP+ ++ KL L G+ DAS YR +
Sbjct: 1198 EATRTKQGLHLMQRKYIKDLLAKHNMADAKPVLTPLPTSPKLTLHGGTKLNDASEYRSVV 1257
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIAYAV
Sbjct: 1258 GSLQYLAFTRPDIAYAV 1274
>emb|CAN64561.1| hypothetical protein VITISV_038232 [Vitis vinifera]
Length = 140
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/77 (54%), Positives = 53/77 (68%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S + +LTQ KY DLL+R HM D+KP TP++S KL DG+P +DA+ YR +
Sbjct: 50 EAKRTSTSLVLTQTKYTLDLLTRTHMQDSKPCPTPLASGSKLSAYDGAPLSDATEYRSIV 109
Query: 182 GSLQYLLFTRPDIAYAV 232
G+LQYL TRPDI YAV
Sbjct: 110 GALQYLTLTRPDICYAV 126
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 83.2 bits (204), Expect = 4e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S+ L Q++Y+ DLL + +ML A PV TPMS T KL L G P S YR L
Sbjct: 1175 EATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVL 1234
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYLLFTRPDIAYAV
Sbjct: 1235 GSLQYLLFTRPDIAYAV 1251
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 83.2 bits (204), Expect = 4e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S+ L Q++Y+ DLL + +ML A PV TPMS T KL L G P S YR L
Sbjct: 1175 EATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVL 1234
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYLLFTRPDIAYAV
Sbjct: 1235 GSLQYLLFTRPDIAYAV 1251
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 83.2 bits (204), Expect = 4e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S+ L Q++Y+ DLL + +ML A PV TPMS T KL L G P S YR L
Sbjct: 1175 EATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGKPLDKPSEYRAVL 1234
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYLLFTRPDIAYAV
Sbjct: 1235 GSLQYLLFTRPDIAYAV 1251
>emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thaliana]
gi|10177325|dbj|BAB10674.1| copia-like retroelement pol
polyprotein-like [Arabidopsis thaliana]
Length = 1021
Score = 82.8 bits (203), Expect = 5e-14
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +2
Query: 11 RGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKALGSL 190
R S+ L+QRKYI DLL R++M++AKPV TPM+S+ KL L G +D + YRK +GSL
Sbjct: 37 RTSKGLHLSQRKYILDLLQRYNMINAKPVGTPMASSPKLTLMSGITLSDPTEYRKLVGSL 96
Query: 191 QYLLFTRPDIAYAV 232
QYL FTR DIAYAV
Sbjct: 97 QYLAFTRLDIAYAV 110
>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 825
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSP--PTDASVYRK 175
EV + S LLTQ KY DLL R +M + KPV TP+S + KL L +GSP P DA+ YR
Sbjct: 651 EVTKVSNGILLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRS 710
Query: 176 ALGSLQYLLFTRPDIAYAV 232
+G+LQYL TRPDIAY+V
Sbjct: 711 IVGALQYLTLTRPDIAYSV 729
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S+ L Q KY+ DLLSR MLDAKPV TPM++ KL L G + YR +
Sbjct: 1258 EATRTSQGLHLMQHKYVYDLLSRMKMLDAKPVSTPMATHPKLSLYSGIALDEPGEYRTVI 1317
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIAYAV
Sbjct: 1318 GSLQYLAFTRPDIAYAV 1334
>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
Length = 950
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSP--PTDASVYRK 175
EV + S +LTQ KY DLL R +M + KPV TP+S + KL L +GSP P DA+ YR
Sbjct: 238 EVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRS 297
Query: 176 ALGSLQYLLFTRPDIAYAV 232
+G+LQYL TRPDIAY+V
Sbjct: 298 IVGALQYLTLTRPDIAYSV 316
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
E R S+ L Q++Y+ DLL + +ML A PV TPMS T KL L G+P S YR L
Sbjct: 1171 EATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGTPLDKPSEYRAVL 1230
Query: 182 GSLQYLLFTRPDIAYAV 232
GSLQYL FTRPDIAYAV
Sbjct: 1231 GSLQYLSFTRPDIAYAV 1247
>emb|CAN71173.1| hypothetical protein VITISV_037664 [Vitis vinifera]
Length = 809
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKAL 181
EV+ + LTQ KYI D+L++ M AK V TP+S++V L L DGSP D++ YR+ +
Sbjct: 546 EVIPTKDGLFLTQHKYIRDILAKTSMDGAKDVTTPLSTSVSLQLADGSPSVDSTEYRRVI 605
Query: 182 GSLQYLLFTRPDIAYAV 232
G+LQYL TRPDI++AV
Sbjct: 606 GALQYLSLTRPDISFAV 622
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSP--PTDASVYRK 175
EV + S +LTQ KY+ DLL R +M D KPV TP+S++ KL + +G P P DA+ YR
Sbjct: 972 EVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRS 1031
Query: 176 ALGSLQYLLFTRPDIAYAV 232
+G+LQYL TRPDIA+ V
Sbjct: 1032 VVGALQYLTLTRPDIAFPV 1050
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSP--PTDASVYRK 175
EV + S +LTQ KY D+L R +M + KPV TP+S + KL L +GSP P DA+ YR
Sbjct: 1173 EVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRS 1232
Query: 176 ALGSLQYLLFTRPDIAYAV 232
+G+LQYL TRPDIAY+V
Sbjct: 1233 IVGALQYLTLTRPDIAYSV 1251
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2
Query: 32 LTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKALGSLQYLLFTR 211
L+QR+YI DLL+R +M+ AKPV TPM+ + KL L G+ TD + YR +GSLQYL FTR
Sbjct: 1165 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTR 1224
Query: 212 PDIAYAV 232
PDI+YAV
Sbjct: 1225 PDISYAV 1231
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 EVLRGSETCLLTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSP--PTDASVYRK 175
EV + S +LTQ KY DLL R +M + KPV TP+S + KL L +GSP P DA YR
Sbjct: 1170 EVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRS 1229
Query: 176 ALGSLQYLLFTRPDIAYAV 232
+G+LQYL TRPDIAY+V
Sbjct: 1230 IVGALQYLTLTRPDIAYSV 1248
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2
Query: 32 LTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKALGSLQYLLFTR 211
L+QR+YI DLL+R +M+ AKPV TPM+ + KL L G+ TD + YR +GSLQYL FTR
Sbjct: 1200 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTR 1259
Query: 212 PDIAYAV 232
PDI+YAV
Sbjct: 1260 PDISYAV 1266
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2
Query: 32 LTQRKYITDLLSRHHMLDAKPVQTPMSSTVKLMLGDGSPPTDASVYRKALGSLQYLLFTR 211
L+QR+YI DLL+R +M+ AKPV TPM+ + KL L G+ TD + YR +GSLQYL FTR
Sbjct: 1181 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTR 1240
Query: 212 PDIAYAV 232
PDI+YAV
Sbjct: 1241 PDISYAV 1247