BLASTX nr result
ID: Mentha27_contig00048201
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00048201
(386 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_734017.2| RNA-dependent RNA polymerase [Cycas necrotic st... 225 4e-57
ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus] gi|5... 225 4e-57
gb|AEN25475.1| polyprotein 1, partial [Cycas necrotic stunt virus] 224 1e-56
gb|AGH25505.1| RNA-dependent RNA polymerase, partial [Tomato bla... 74 2e-11
ref|NP_734035.1| RNA-dependent RNA polymerase [Beet ringspot virus] 74 3e-11
prf||1507292A polyprotein 74 3e-11
sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: F... 74 3e-11
ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj... 74 3e-11
gb|AGH25498.1| RNA-dependent RNA polymerase, partial [Tomato bla... 72 8e-11
gb|AGH25497.1| RNA-dependent RNA polymerase, partial [Tomato bla... 70 2e-10
gb|AGH25503.1| RNA-dependent RNA polymerase, partial [Tomato bla... 70 4e-10
gb|AGH25499.1| RNA-dependent RNA polymerase, partial [Tomato bla... 70 4e-10
gb|AGH25496.1| RNA-dependent RNA polymerase, partial [Tomato bla... 70 4e-10
ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus] gi|... 69 5e-10
gb|AGH25500.1| RNA-dependent RNA polymerase, partial [Tomato bla... 69 5e-10
ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot... 69 5e-10
ref|YP_002000610.1| RNA-dependent RNA polymerase [Grapevine chro... 69 5e-10
gb|AGH25504.1| RNA-dependent RNA polymerase, partial [Tomato bla... 69 7e-10
gb|AGH25502.1| RNA-dependent RNA polymerase, partial [Tomato bla... 69 7e-10
gb|AGH25501.1| RNA-dependent RNA polymerase, partial [Tomato bla... 69 7e-10
>ref|NP_734017.2| RNA-dependent RNA polymerase [Cycas necrotic stunt virus]
Length = 846
Score = 225 bits (574), Expect = 4e-57
Identities = 104/126 (82%), Positives = 115/126 (91%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDAAIPQASLPG FY ANAE+E LLQEHKTGT+IGL T+K NL+ RDLIMQGQ+LGKL
Sbjct: 718 YFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKL 777
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDW 20
P+MAATQAP K+YVGLCC K FCPGHATSS+S+ KAFSQCWAMRCAPNSSSRKVTFEP+W
Sbjct: 778 PVMAATQAPNKFYVGLCCQKNFCPGHATSSDSIAKAFSQCWAMRCAPNSSSRKVTFEPEW 837
Query: 19 RKNKFL 2
RKNKFL
Sbjct: 838 RKNKFL 843
>ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus]
gi|50400776|sp|Q8QVV0.1|POL1_CNSV RecName: Full=RNA1
polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=Protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
gi|20160382|dbj|BAB89369.1| polyprotien 1 [Cycas necrotic
stunt virus]
Length = 2336
Score = 225 bits (574), Expect = 4e-57
Identities = 104/126 (82%), Positives = 115/126 (91%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDAAIPQASLPG FY ANAE+E LLQEHKTGT+IGL T+K NL+ RDLIMQGQ+LGKL
Sbjct: 2208 YFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKL 2267
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDW 20
P+MAATQAP K+YVGLCC K FCPGHATSS+S+ KAFSQCWAMRCAPNSSSRKVTFEP+W
Sbjct: 2268 PVMAATQAPNKFYVGLCCQKNFCPGHATSSDSIAKAFSQCWAMRCAPNSSSRKVTFEPEW 2327
Query: 19 RKNKFL 2
RKNKFL
Sbjct: 2328 RKNKFL 2333
>gb|AEN25475.1| polyprotein 1, partial [Cycas necrotic stunt virus]
Length = 1984
Score = 224 bits (570), Expect = 1e-56
Identities = 103/126 (81%), Positives = 114/126 (90%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDAAIPQASLPG FY ANAE+E LLQEHKTGT+IGL TDK NL+ RDLIMQGQ+LGKL
Sbjct: 1856 YFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTDKANLNGARDLIMQGQKLGKL 1915
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDW 20
PIMAATQAP K+YVGLCC K FCPGHATSS+++ KAFSQCWAMRCAPNSSSRK+TFEP+W
Sbjct: 1916 PIMAATQAPNKFYVGLCCQKNFCPGHATSSDTIAKAFSQCWAMRCAPNSSSRKITFEPEW 1975
Query: 19 RKNKFL 2
RKNK L
Sbjct: 1976 RKNKVL 1981
>gb|AGH25505.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDA +PQA++ G FYF + ET L E+K G ++ K++ + Q Q K+
Sbjct: 164 YFDAPVPQANI-GTFYFGDGETYAALCEYKDGKVLQYEGWPKSI------LNQAAQDRKV 216
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
P M A Q G++ V + C K CP H+ + + E AF QCW +CA N+ S+
Sbjct: 217 PCMVARQCKGRFTVHMACDSKMCPHHSATGANYEVAFKQCWLNKCKCAGNTVSK 270
>ref|NP_734035.1| RNA-dependent RNA polymerase [Beet ringspot virus]
Length = 824
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA +P A++ G FYFAN ET L E+K G ++ N + LI+ + + K
Sbjct: 711 YFDAPLPTATI-GTFYFANGETYAALCEYKEGKVL-------NYEGFPTLILNEAAKDRK 762
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
+P M ATQA K+ V L C CP H + EKAF CW +C
Sbjct: 763 VPCMVATQAKTKFKVSLACDSTMCPHHTAVCETYEKAFRHCWLAKC 808
>prf||1507292A polyprotein
Length = 2264
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA +P A++ G FYFAN ET L E+K G ++ N + LI+ + + K
Sbjct: 2151 YFDAPLPTATI-GTFYFANGETYAALCEYKEGKVL-------NYEGFPTLILNEAAKDRK 2202
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
+P M ATQA K+ V L C CP H + EKAF CW +C
Sbjct: 2203 VPCMVATQAKTKFKVSLACDSTMCPHHTAVCETYEKAFRHCWLAKC 2248
>sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=Protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
Length = 2264
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA +P A++ G FYFAN ET L E+K G ++ N + LI+ + + K
Sbjct: 2151 YFDAPLPTATI-GTFYFANGETYAALCEYKEGKVL-------NYEGFPTLILNEAAKDRK 2202
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
+P M ATQA K+ V L C CP H + EKAF CW +C
Sbjct: 2203 VPCMVATQAKTKFKVSLACDSTMCPHHTAVCETYEKAFRHCWLAKC 2248
>ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj|BAA00234.1|
polyprotein [Beet ringspot virus]
Length = 2266
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA +P A++ G FYFAN ET L E+K G ++ N + LI+ + + K
Sbjct: 2153 YFDAPLPTATI-GTFYFANGETYAALCEYKEGKVL-------NYEGFPTLILNEAAKDRK 2204
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
+P M ATQA K+ V L C CP H + EKAF CW +C
Sbjct: 2205 VPCMVATQAKTKFKVSLACDSTMCPHHTAVCETYEKAFRHCWLAKC 2250
>gb|AGH25498.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDA IPQA++ G FYF + ET L E+K G ++ + L +T ++ Q Q K+
Sbjct: 164 YFDAPIPQANI-GTFYFGDGETYAALCEYKDGKVL----QYEGLPTT--ILNQAAQDRKV 216
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
P M A Q K+ V + C + CP H+ + + E AF QCW +CA N+ S+
Sbjct: 217 PCMVARQWKSKFTVHMACDSRMCPHHSATGANYEVAFKQCWLNKCKCAGNTVSK 270
>gb|AGH25497.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQQLGKL 200
+FDA IPQAS+ G FYF + ET L E+K G ++ + L +T ++ Q + K+
Sbjct: 164 YFDAPIPQASV-GTFYFGDGETYAALCEYKDGKVL----QYEGLPTT--ILNQAAKERKV 216
Query: 199 PIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
P + A Q K+ V + C + CP H+ + + E AF QCW +CA N+ S+
Sbjct: 217 PCIVARQRKDKFTVHMACDSRMCPHHSATGANYEVAFKQCWLNKCKCAGNTVSK 270
>gb|AGH25503.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA IP A++ G FYF + ET L E+K G ++ + LI+ Q + K
Sbjct: 164 YFDAPIPSANI-GTFYFGDGETYAALCEYKDGKVL-------QYEGLPTLILNQAAKDRK 215
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
+P M A Q GK+ V + C K CP H + + E AF QCW +CA N+ S+
Sbjct: 216 VPCMVARQRKGKFTVHMACDSKMCPHHFATGANYEVAFKQCWLNKCKCAGNTVSK 270
>gb|AGH25499.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA IP A++ G FYF + ET L E+K G ++ + LI+ Q + K
Sbjct: 164 YFDAPIPSANI-GTFYFGDGETYAALCEYKDGKVL-------QYEGLPTLILNQAAKDRK 215
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
+P M A Q GK+ V + C K CP H + + E AF QCW +CA N+ S+
Sbjct: 216 VPCMVARQRKGKFTVHMACDSKMCPHHFATGANYEVAFKQCWLNKCKCAGNTVSK 270
>gb|AGH25496.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIM-QGQQLGK 203
+FDA IP A++ G FYF + ET L E+K G ++ + LI+ Q + K
Sbjct: 164 YFDAPIPSANI-GTFYFGDGETYAALCEYKDGKVL-------QYEGLPTLILNQAAKDRK 215
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCW--AMRCAPNSSSR 44
+P M A Q GK+ V + C K CP H + + E AF QCW +CA N+ S+
Sbjct: 216 VPCMVARQRKGKFTVHMACDSKMCPHHFATGANYEVAFKQCWLNKCKCAGNTVSK 270
>ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus]
gi|130391|sp|P13025.1|POL1_GCMV RecName: Full=RNA1
polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=Protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
gi|59346|emb|CAA33405.1| unnamed protein product
[Grapevine chrome mosaic virus]
Length = 2252
Score = 69.3 bits (168), Expect = 5e-10
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQ-QLGK 203
+FDA +P A++ G+ YFAN ET L E K G ++ ++ T I+ G + GK
Sbjct: 2135 YFDAPLPAATI-GKSYFANGETYAALCEFKNGEVLDIV------GPTNVQILNGAVRQGK 2187
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPD 23
+P +AA K+ V L C+K CP H + + E+AF CW +C K T
Sbjct: 2188 VPCLAAHSVGTKFKVSLVCNKTMCPHHHHTGPTFEQAFRTCWLSKC-----KTKETQVSP 2242
Query: 22 WRKNKFL 2
W KFL
Sbjct: 2243 WFGTKFL 2249
>gb|AGH25500.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTII---GLMTDKKNLDSTRDLIMQGQQL 209
+FDA I QAS+ G FYF + ET L E+K G ++ GL T ++ Q +
Sbjct: 164 YFDAPISQASV-GTFYFGDGETYAALCEYKDGKVLQYEGLPTM---------ILNQAAKE 213
Query: 208 GKLPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
K+P M A Q K+ V + C + CP H+ + + E AF QCW RC
Sbjct: 214 RKVPCMVARQRKNKFTVQMACDSRMCPHHSATGANYEVAFKQCWVSRC 261
>ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot virus]
gi|400131550|emb|CCG47847.1| polyprotein p1 [Grapevine
Anatolian ringspot virus]
Length = 2243
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDST--RDLIMQGQQLG 206
+FDA IP A++ G+ YFAN ET L + K ++ N+D+ + + ++G
Sbjct: 2129 YFDAPIPAAAV-GKCYFANGETYAALCQFKEAEVL-------NIDAPLGTQALNEAAKMG 2180
Query: 205 KLPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
K P + A+Q GK++V + C K CP H +S + E AF CW +C
Sbjct: 2181 KTPCLFASQQRGKFHVYMVCDNKMCPHHHATSPNYEAAFRHCWLAKC 2227
>ref|YP_002000610.1| RNA-dependent RNA polymerase [Grapevine chrome mosaic virus]
Length = 826
Score = 69.3 bits (168), Expect = 5e-10
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTIIGLMTDKKNLDSTRDLIMQGQ-QLGK 203
+FDA +P A++ G+ YFAN ET L E K G ++ ++ T I+ G + GK
Sbjct: 709 YFDAPLPAATI-GKSYFANGETYAALCEFKNGEVLDIV------GPTNVQILNGAVRQGK 761
Query: 202 LPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPD 23
+P +AA K+ V L C+K CP H + + E+AF CW +C K T
Sbjct: 762 VPCLAAHSVGTKFKVSLVCNKTMCPHHHHTGPTFEQAFRTCWLSKC-----KTKETQVSP 816
Query: 22 WRKNKFL 2
W KFL
Sbjct: 817 WFGTKFL 823
>gb|AGH25504.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 68.9 bits (167), Expect = 7e-10
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTII---GLMTDKKNLDSTRDLIMQGQQL 209
+FDA IPQAS+ G FYF + ET L E+K G ++ GL T ++ Q +
Sbjct: 164 YFDAPIPQASV-GTFYFGDGETYAALCEYKDGKVLQYEGLPTA---------ILNQAAKD 213
Query: 208 GKLPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
K+P M A Q K+ V + C CP H+ + + E AF QCW +C
Sbjct: 214 RKVPCMVARQWKSKFTVRMACDSSMCPHHSATCANFELAFKQCWLSKC 261
>gb|AGH25502.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 68.9 bits (167), Expect = 7e-10
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTII---GLMTDKKNLDSTRDLIMQGQQL 209
+FDA IPQAS+ G FYF + ET L E+K G ++ GL T ++ Q +
Sbjct: 164 YFDAPIPQASV-GTFYFGDGETYAALCEYKDGKVLQYEGLPTA---------ILNQAAKD 213
Query: 208 GKLPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
K+P M A Q K+ V + C CP H+ + + E AF QCW +C
Sbjct: 214 RKVPCMVARQWKSKFTVRMACDSSMCPHHSATCANFELAFKQCWLSKC 261
>gb|AGH25501.1| RNA-dependent RNA polymerase, partial [Tomato black ring virus]
Length = 277
Score = 68.9 bits (167), Expect = 7e-10
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -2
Query: 379 WFDAAIPQASLPGQFYFANAETEFLLQEHKTGTII---GLMTDKKNLDSTRDLIMQGQQL 209
+FDA IPQAS+ G FYF + ET L E+K G ++ GL T ++ Q +
Sbjct: 164 YFDAPIPQASV-GTFYFGDGETYAALCEYKDGKVLQYEGLPTA---------ILNQAAKD 213
Query: 208 GKLPIMAATQAPGKYYVGLCCHKKFCPGHATSSNSVEKAFSQCWAMRC 65
K+P M A Q K+ V + C CP H+ + + E AF QCW +C
Sbjct: 214 RKVPCMVARQWKSKFTVRMACDSSMCPHHSATCANFELAFKQCWLSKC 261