BLASTX nr result

ID: Mentha27_contig00047852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00047852
         (306 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...    54   8e-12
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    49   1e-11
ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitun...    61   1e-07
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac...    59   7e-07
emb|CAA25830.1| hypothetical protein [Pisum sativum]                   57   2e-06
pir||T06501 hypothetical protein 59 - garden pea chloroplast           57   2e-06
gb|AFK48586.1| unknown [Medicago truncatula]                           57   2e-06
ref|NP_817169.1| ORF64a [Pinus koraiensis] gi|29469690|gb|AAO740...    57   3e-06
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ...    57   3e-06
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ...    57   3e-06

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
           gi|355518112|gb|AES99735.1| hypothetical protein
           MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score = 53.9 bits (128), Expect(2) = 8e-12
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 220 YPTPRGIRIPAASLKERCPKPLDDG 294
           YPTPRG RIP ASLKERCPKPLDDG
Sbjct: 39  YPTPRGSRIPVASLKERCPKPLDDG 63



 Score = 41.6 bits (96), Expect(2) = 8e-12
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 56  YWAELDLNQRRHIANEFT 109
           +WAELDLNQRRHIANEFT
Sbjct: 21  FWAELDLNQRRHIANEFT 38


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 49.3 bits (116), Expect(2) = 1e-11
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -2

Query: 305 SSRPPSSSGLGHLSFKEAAGIRIPLG 228
           +S PPSSSGLGHLSFKEA GIR+PLG
Sbjct: 45  ASMPPSSSGLGHLSFKEATGIRLPLG 70



 Score = 45.8 bits (107), Expect(2) = 1e-11
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 127 RLMGTDCKFVGNMSTLVQIQL 65
           RLMGTDCKFVGNMSTLVQIQL
Sbjct: 71  RLMGTDCKFVGNMSTLVQIQL 91


>ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitungensis]
           gi|452848985|ref|YP_007474664.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941505|dbj|BAF64929.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863140|gb|AEX99213.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 62

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -2

Query: 299 RPPSSSGLGHLSFKEAAGIRIPLGVGY--YERKLIMDYQ*ISL*NKKKMKMDSSWVDARA 126
           RP SSSG GHLSFKEAAGIR+PLGV +  + R   + +Q +S+          SWVDAR 
Sbjct: 5   RPLSSSGPGHLSFKEAAGIRLPLGVLWESFSRNTYLVFQTLSI--------HCSWVDARV 56

Query: 125 VNGDGL 108
           VN DGL
Sbjct: 57  VNEDGL 62


>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
           gi|7636100|emb|CAB88720.1| hypothetical protein
           [Spinacia oleracea]
          Length = 83

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 136 MPERLMGTDCKFVGNMSTLVQIQLGPI 56
           MPERLMGTDCKFVGNMSTLVQIQLGPI
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPI 27


>emb|CAA25830.1| hypothetical protein [Pisum sativum]
          Length = 62

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +2

Query: 32  ISW*IDAVYWAELDLNQRRHIANEFTVRPH 121
           ISW I   +WAELDLNQRRHIANEFTVRPH
Sbjct: 33  ISWWIQKYFWAELDLNQRRHIANEFTVRPH 62


>pir||T06501 hypothetical protein 59 - garden pea chloroplast
          Length = 62

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +2

Query: 32  ISW*IDAVYWAELDLNQRRHIANEFTVRPH 121
           ISW I   +WAELDLNQRRHIANEFTVRPH
Sbjct: 33  ISWWIQKYFWAELDLNQRRHIANEFTVRPH 62


>gb|AFK48586.1| unknown [Medicago truncatula]
          Length = 29

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 136 MPERLMGTDCKFVGNMSTLVQIQLGP 59
           MPERLMGTDCKFVGNMSTLVQIQLGP
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGP 26


>ref|NP_817169.1| ORF64a [Pinus koraiensis] gi|29469690|gb|AAO74018.1| ORF64a [Pinus
           koraiensis]
          Length = 64

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 154 WILPGSMPERLMGTDCKFVGNMSTLVQIQLGPINRIN 44
           +I+PGSMPE LM TDCK VGNM TLVQIQL P N IN
Sbjct: 16  FIVPGSMPEWLMRTDCKSVGNMPTLVQIQLDPTNIIN 52


>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
           gi|355507095|gb|AES88237.1| hypothetical protein
           MTR_4g051190 [Medicago truncatula]
          Length = 96

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = +1

Query: 220 YPTPRGIRIPAASLKERCPKPLDDGGRL 303
           YPTPRG RIP ASLKERCPKPLDDGG L
Sbjct: 59  YPTPRGSRIPVASLKERCPKPLDDGGIL 86


>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
           gi|355506697|gb|AES87839.1| hypothetical protein
           MTR_4g035260 [Medicago truncatula]
          Length = 142

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = +1

Query: 220 YPTPRGIRIPAASLKERCPKPLDDGGRL 303
           YPTPRG RIP ASLKERCPKPLDDGG L
Sbjct: 105 YPTPRGSRIPVASLKERCPKPLDDGGIL 132


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