BLASTX nr result

ID: Mentha27_contig00047524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00047524
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006574683.1| PREDICTED: zinc finger CCCH domain-containin...    62   8e-08
ref|XP_006574681.1| PREDICTED: zinc finger CCCH domain-containin...    62   8e-08
ref|XP_006573559.1| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07
ref|XP_003519872.2| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06
ref|XP_002310301.1| hypothetical protein POPTR_0007s13990g [Popu...    57   4e-06

>ref|XP_006574683.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           isoform X3 [Glycine max]
          Length = 522

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +2

Query: 14  EMNPKLQKPCIYFSSPRGCKNGHNCLFQHNVPEQWKMAQV 133
           E+  K+QKPCIYF SPRGC+NG NC +QH+V +QW    V
Sbjct: 468 EVKHKIQKPCIYFKSPRGCRNGSNCPYQHDVSDQWGAGNV 507


>ref|XP_006574681.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           isoform X1 [Glycine max]
           gi|571438809|ref|XP_006574682.1| PREDICTED: zinc finger
           CCCH domain-containing protein 6-like isoform X2
           [Glycine max]
          Length = 569

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +2

Query: 14  EMNPKLQKPCIYFSSPRGCKNGHNCLFQHNVPEQWKMAQV 133
           E+  K+QKPCIYF SPRGC+NG NC +QH+V +QW    V
Sbjct: 515 EVKHKIQKPCIYFKSPRGCRNGSNCPYQHDVSDQWGAGNV 554


>ref|XP_006573559.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
           [Glycine max]
          Length = 389

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
 Frame = +2

Query: 14  EMNPKLQKPCIYFSSPRGCKNGHNCLFQHNVPEQWK-----MAQVNKKMK 148
           E+  K +KPCIYF +PRGC+NG +C FQH++P QW+     MAQ  K++K
Sbjct: 335 EVKFKSKKPCIYFGTPRGCRNGSDCPFQHDMPNQWEAGNVLMAQNAKRLK 384


>ref|XP_003519872.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 555

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +2

Query: 14  EMNPKLQKPCIYFSSPRGCKNGHNCLFQHNVPEQ 115
           E+ PK+ KPCIYF SPRGC+NG NC +QH+V  Q
Sbjct: 501 EVKPKILKPCIYFKSPRGCRNGSNCSYQHDVSAQ 534


>ref|XP_002310301.1| hypothetical protein POPTR_0007s13990g [Populus trichocarpa]
           gi|222853204|gb|EEE90751.1| hypothetical protein
           POPTR_0007s13990g [Populus trichocarpa]
          Length = 557

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
 Frame = +2

Query: 14  EMNPKLQKPCIYFSSPRGCKNGHNCLFQHNVPEQWKMA------QVNKKMKWN 154
           E+ PK QKPC+YF +P+GC+NG +C FQH++  Q++        QV K+MK++
Sbjct: 497 ELKPKFQKPCMYFRTPKGCRNGSDCHFQHDMSFQFQTGSGDSKLQVAKRMKFS 549


Top