BLASTX nr result

ID: Mentha27_contig00047352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00047352
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis]              73   5e-11
gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis]      73   5e-11
ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis...    68   1e-09
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ...    67   2e-09
ref|XP_004309313.1| PREDICTED: 50S ribosomal protein L2, chlorop...    66   4e-09
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    66   4e-09
ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    64   2e-08
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]    62   6e-08
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...    62   6e-08

>gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis]
          Length = 200

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = -1

Query: 103 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 27  SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 60


>gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis]
          Length = 97

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = -1

Query: 103 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 27  SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 60


>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
           gi|536462748|gb|AGU37113.1| ribosomal protein L2
           (chloroplast) [Berberis bealei]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = -1

Query: 103 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           S TS KPYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 137 SYTSGKPYALEEACTVWEGVLIDQKEESTSTDMP 170


>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
           gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
           putative [Ricinus communis]
          Length = 111

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -1

Query: 103 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           SST RKPYALEEACTVWE +LIDQKEESTSTDMP
Sbjct: 7   SSTPRKPYALEEACTVWEEILIDQKEESTSTDMP 40


>ref|XP_004309313.1| PREDICTED: 50S ribosomal protein L2, chloroplastic-like, partial
          [Fragaria vesca subsp. vesca]
          Length = 170

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 91 RKPYALEEACTVWEGVLIDQKEESTSTDMP 2
          RKPYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 1  RKPYALEEACTVWEGVLIDQKEESTSTDMP 30


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 91  RKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           RKPYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 170 RKPYALEEACTVWEGVLIDQKEESTSTDMP 199


>ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 414

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = -1

Query: 91  RKPYALEEACTVWEGVLIDQKEESTSTDMP 2
           RKPYALEEACTVWEGVLID KEESTSTDMP
Sbjct: 185 RKPYALEEACTVWEGVLIDXKEESTSTDMP 214


>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
          Length = 122

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 85 PYALEEACTVWEGVLIDQKEESTSTDMP 2
          PYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 1  PYALEEACTVWEGVLIDQKEESTSTDMP 28


>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 85  PYALEEACTVWEGVLIDQKEESTSTDMP 2
           PYALEEACTVWEGVLIDQKEESTSTDMP
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMP 262


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