BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00046995
         (235 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   106   3e-21
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...    79   5e-13
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...    79   9e-13
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...    79   9e-13
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    78   1e-12
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]    77   3e-12
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...    73   5e-11
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...    73   5e-11
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...    73   5e-11
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...    72   8e-11
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...    71   2e-10
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...    69   5e-10
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...    69   9e-10
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...    68   1e-09
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...    68   1e-09
ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Caps...    67   3e-09
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi...    67   3e-09
emb|CBI34757.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutr...    65   1e-08
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...    64   2e-08

>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/78 (66%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VLERYK+    SEK++ ++K+YEKQS+NDSASS+SGL+NIK+L+L KRTD++FRMVVVGD
Sbjct: 236 VLERYKIC---SEKVSAIEKIYEKQSSNDSASSSSGLRNIKELILAKRTDNAFRMVVVGD 292

Query: 181 PRVKVHEIGLPFPVAQNV 234
           PR+KV EIGLP  +A++V
Sbjct: 293 PRLKVDEIGLPIQIAESV 310


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQ-SANDSASSASGLKNIKDLLLGKRTDHSFRMVVVG 177
           VL+  K SKI  +K  N       Q   NDS+SS+SGL+ IKD++LGKR D+SFRMVVVG
Sbjct: 276 VLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRWIKDVVLGKRNDNSFRMVVVG 335

Query: 178 DPRVKVHEIGLPFPVAQNV 234
           DP +K  EIG+P P+A+ +
Sbjct: 336 DPNIKFSEIGIPCPIAERL 354


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = +1

Query: 73  QSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQNV 234
           +S NDSASS+S LKNIK+L+L KRTD+ FRMVVVGDPR++V EIGLP  VA+N+
Sbjct: 270 RSLNDSASSSSALKNIKELVLAKRTDNCFRMVVVGDPRIRVDEIGLPSHVAENM 323


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1438

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 40/78 (51%), Positives = 53/78 (67%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VL+  K+SKI  EK        E+Q   DS S  SGL+ IKD++LGKR+DH FRMVVVGD
Sbjct: 260 VLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHCFRMVVVGD 319

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +K+ EIG+P  +A+ +
Sbjct: 320 PNIKLSEIGIPRHIAEKM 337


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VL+  K SK+RSEK T+           DSAS  SGLK IK++LLGKRT+HSFRM+VVGD
Sbjct: 314 VLDCLKTSKLRSEKSTS----------KDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGD 363

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P++++ EIG+P  +A+ +
Sbjct: 364 PKLRLSEIGIPCHIAEEL 381


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 56/72 (77%)
 Frame = +1

Query: 19  LSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVH 198
           L  +++ K +NL+   EK ++ DSAS  SGLK IK++LLGKRT+HSFRM+VVGDP++++ 
Sbjct: 282 LDCLKTSKASNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLS 339

Query: 199 EIGLPFPVAQNV 234
           EIG+P  +A+ +
Sbjct: 340 EIGIPCHIAEEL 351


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Solanum tuberosum]
          Length = 1233

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/78 (47%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VL+R K+SKIR+++             ND  + A+GLK +K+L+L KRT+H+FRMVVVGD
Sbjct: 54  VLDRIKVSKIRADRSV----------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGD 103

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +++ EIG+P  VA+N+
Sbjct: 104 PNIELGEIGIPCHVAENL 121


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Solanum tuberosum]
          Length = 1446

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/78 (47%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VL+R K+SKIR+++             ND  + A+GLK +K+L+L KRT+H+FRMVVVGD
Sbjct: 267 VLDRIKVSKIRADRSV----------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGD 316

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +++ EIG+P  VA+N+
Sbjct: 317 PNIELGEIGIPCHVAENL 334


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
           lycopersicum]
          Length = 1446

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/78 (47%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           VL+R K+SKIR+++             ND  + A+GLK +K+L+L KRT+H+FRMVVVGD
Sbjct: 267 VLDRIKVSKIRADRSV----------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGD 316

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +++ EIG+P  VA+N+
Sbjct: 317 PNIELGEIGIPCHVAENL 334


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/73 (41%), Positives = 54/73 (73%)
 Frame = +1

Query: 16  KLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKV 195
           +L  + SEKL++ + ++ +Q  N+  S+ SG + +K+++LGKR+DH  RMVVVGDP +++
Sbjct: 237 RLKYLHSEKLSSKEVLFAQQKTNEGPSNTSGSRWVKEVVLGKRSDHCLRMVVVGDPNIRL 296

Query: 196 HEIGLPFPVAQNV 234
           +EIG+P  +A+ +
Sbjct: 297 NEIGIPARIAERM 309


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQK--VYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVV 174
           VLE  K+SK+  EK +N +   V  ++   DSAS+ SGL+ +KD++LGKR DH FRMV+ 
Sbjct: 283 VLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRNDHCFRMVLT 342

Query: 175 GDPRVKVHEIGLPFPVAQNV 234
           G+P +K+ EI +P  VA+ +
Sbjct: 343 GNPNLKLSEISIPCHVAERL 362


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/57 (54%), Positives = 46/57 (80%)
 Frame = +1

Query: 64  YEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQNV 234
           Y ++   D+A+S+SGL+ IKD++LGKR+DH FRMVVVGDP +++ EIG+P  VA+ +
Sbjct: 304 YYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERL 360


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
           gi|557542783|gb|ESR53761.1| hypothetical protein
           CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 16  KLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKV 195
           K+SK+  +K +       +Q  N   S++SGL+ IKD++LGKR D  FRMVV GDP +K+
Sbjct: 279 KISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKL 338

Query: 196 HEIGLPFPVAQNV 234
            EIG+P  VA+ +
Sbjct: 339 KEIGIPCQVAERL 351


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X3 [Citrus sinensis]
           gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1-like isoform X4 [Citrus
           sinensis]
          Length = 1443

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 16  KLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKV 195
           K+SK+  +K +       +Q  N   S++SGL+ IKD++LGKR D  FRMVV GDP +K+
Sbjct: 279 KISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKL 338

Query: 196 HEIGLPFPVAQNV 234
            EIG+P  VA+ +
Sbjct: 339 KEIGIPCHVAERL 351


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Citrus sinensis]
          Length = 1481

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 16  KLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKV 195
           K+SK+  +K +       +Q  N   S++SGL+ IKD++LGKR D  FRMVV GDP +K+
Sbjct: 317 KISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKL 376

Query: 196 HEIGLPFPVAQNV 234
            EIG+P  VA+ +
Sbjct: 377 KEIGIPCHVAERL 389


>ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Capsella rubella]
           gi|482569356|gb|EOA33544.1| hypothetical protein
           CARUB_v10019657mg [Capsella rubella]
          Length = 1459

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           V+E  + S++ SE +++ Q                GL+ +KD+LLGKR+DH+FR +VVGD
Sbjct: 273 VVECMQYSRLFSETVSSSQDSANPYQKKPDTPKLCGLRFMKDVLLGKRSDHTFRAIVVGD 332

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +K+HEIG+P  +A+ +
Sbjct: 333 PALKLHEIGIPQTIAERI 350


>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata]
           gi|297332282|gb|EFH62700.1| NRPD1a [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1456

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           V+E  + S++ SE +++ Q                GL+ +KD+LLGKR+DH+FR VVVGD
Sbjct: 270 VIECMQYSRLFSENVSSSQDSANPYQKKSDTPKLCGLRFMKDVLLGKRSDHTFRTVVVGD 329

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +K+HEIG+P  +A+ +
Sbjct: 330 PSLKLHEIGIPERIAKRL 347


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = +1

Query: 88  SASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQNV 234
           SAS  SGLK IK++LLGKRT+HSFRM+VVGDP++++ EIG+P  +A+ +
Sbjct: 276 SASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEEL 324


>ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
           gi|557088296|gb|ESQ29076.1| hypothetical protein
           EUTSA_v10023214mg [Eutrema salsugineum]
          Length = 1465

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGD 180
           V+E  + S++ SE +++ Q+               GL+ +KD+LLGKR+DH+FR VVVGD
Sbjct: 271 VIECMQYSRLFSENVSSSQESANPYQKKSDTPKLCGLRFMKDVLLGKRSDHTFRTVVVGD 330

Query: 181 PRVKVHEIGLPFPVAQNV 234
           P +K++EIG+P  +A+ +
Sbjct: 331 PSLKLNEIGIPRRIAERL 348


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
           [Cicer arietinum]
          Length = 1474

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   VLERYKLSKIRSEKL-TNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVG 177
           VL+  + SKI  +K  +N+    + +   ++A ++SGL+ +KD++LGKR D SFR VVVG
Sbjct: 277 VLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVG 336

Query: 178 DPRVKVHEIGLPFPVAQNV 234
           DP +++ EIGLP  +A+ +
Sbjct: 337 DPDLELSEIGLPCQIAEGL 355