BLASTX nr result

ID: Mentha27_contig00046653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00046653
         (301 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39785.1| hypothetical protein MIMGU_mgv1a021992mg, partial...    59   7e-07
ref|XP_006362187.1| PREDICTED: F-box/kelch-repeat protein At3g23...    59   7e-07
ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06...    55   8e-06
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...    55   8e-06

>gb|EYU39785.1| hypothetical protein MIMGU_mgv1a021992mg, partial [Mimulus
           guttatus]
          Length = 365

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
 Frame = +3

Query: 21  FLLSNPATRVVVQLPD-PGLVVDKVKL----GFGWDEHSDAYKVFLGVPDHENDEGGRVA 185
           FLL NP+TR   +L D      D++KL    GFG+DE SD YKVF G  +     GG +A
Sbjct: 124 FLLWNPSTRKYKKLADVDDDDDDRMKLIIIYGFGFDESSDDYKVFCGFSN--RGRGGTIA 181

Query: 186 RIYSSGTNSWRAVDHGSASLIG--KFGVFARGRIYW 287
           +IYS  T+SW+ ++      +G    G F  G+++W
Sbjct: 182 KIYSLRTDSWKRIEFLEEDNLGLDATGKFVSGKLHW 217


>ref|XP_006362187.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X3
           [Solanum tuberosum] gi|565393030|ref|XP_006362188.1|
           PREDICTED: F-box/kelch-repeat protein At3g23880-like
           isoform X4 [Solanum tuberosum]
           gi|565393032|ref|XP_006362189.1| PREDICTED:
           F-box/kelch-repeat protein At3g23880-like isoform X5
           [Solanum tuberosum]
          Length = 382

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = +3

Query: 18  CFLLSNPATRVVVQLPDPGLVVDKVKLGFGWDEHSDAYKVFLGVPDHENDEGGRV-ARIY 194
           CF++ NP+ R   +LP    +V     GF +DE +D YK+    P +      RV  +IY
Sbjct: 151 CFIIWNPSIRKYKKLPYEEHIVPYFTFGFAYDEFADDYKIVGIFPIYSYASLCRVEVKIY 210

Query: 195 SSGTNSWRAV-DHGSASLIGKFGVFARGRIYWLTK 296
           S  ++SW+ V D+    L+G F  F  G+++WL K
Sbjct: 211 SLKSDSWKRVKDYKGVELLGDFAKFVNGKLHWLDK 245


>ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 387

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
 Frame = +3

Query: 6   GHKGCFLLSNPATRVVVQLPDPGLVVDKV----KLGFGWDEHSDAYKVFLGVPDHENDEG 173
           G     +L NP TR    LP P LV+         GFG+D  +D YKV  G+    ND  
Sbjct: 178 GDSKAIMLWNPCTRDYKVLPKPPLVIHSTFSNYVYGFGYDPANDDYKVIWGLTCDSNDAK 237

Query: 174 GRVARIYSSGTNSWRAV-DHGSASLIGKFGVFARGRIYWL 290
             +  I+S  T SWR + D     +I   G+F  G ++WL
Sbjct: 238 EIMIHIFSLKTGSWRTIKDTDYVRVITCEGLFLNGALHWL 277


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
 Frame = +3

Query: 21   FLLSNPATRVVVQLPDPGLVVDKVKL-GFGWDEHSDAYKVFLG-----VPDHENDEGGRV 182
            F + NP T+    LPDPG   D V   GFG+D  +D YKV  G     V +   +    +
Sbjct: 736  FFVLNPGTKECRALPDPGSYPDGVAYYGFGYDASADDYKVLKGHTRVVVKEAGYEHHESI 795

Query: 183  ARIYSSGTNSWRAVDHGSASLI--GKFGVFARGRIYW 287
             +++S  TNSWR +   S S +     G+F  G ++W
Sbjct: 796  VKVFSLRTNSWRTIQDSSPSYLPYPLPGIFVHGALHW 832


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