BLASTX nr result

ID: Mentha27_contig00046534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00046534
         (281 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago ...    63   5e-08
ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago ...    62   1e-07
ref|XP_003615631.1| hypothetical protein MTR_5g070290 [Medicago ...    61   2e-07
ref|XP_003618141.1| Pentatricopeptide repeat-containing protein ...    59   7e-07
ref|XP_003604342.1| hypothetical protein MTR_4g009790 [Medicago ...    59   9e-07
gb|ABO80475.1| probable reverse transcriptase At2g02650 - , rela...    58   1e-06
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    57   3e-06
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    57   3e-06
ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein A...    56   6e-06

>ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago truncatula]
           gi|355515256|gb|AES96879.1| hypothetical protein
           MTR_5g042640 [Medicago truncatula]
          Length = 270

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 25/88 (28%), Positives = 51/88 (57%)
 Frame = +3

Query: 6   CGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKV 185
           C    E+  H+F  CP A++ W ++GL   ++   +   +  + +  L++N + E++ ++
Sbjct: 48  CASNHEDLMHVFFDCPFAIQVWHRTGLWGSVQHALSITASATKAIFFLLENLSVELTQRL 107

Query: 186 FAIIWSLWKERNSRVWKEKKMTAAWIVK 269
            ++IWS+WK  N RVW +   T+A +V+
Sbjct: 108 SSVIWSIWKHHNLRVWDDVTETSATVVE 135


>ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago truncatula]
           gi|355494007|gb|AES75210.1| hypothetical protein
           MTR_6g031160 [Medicago truncatula]
          Length = 183

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/80 (32%), Positives = 42/80 (52%)
 Frame = +3

Query: 3   ICGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSK 182
           IC    + +WHLF+ C  ++ CW K  +   +EE  +G E+F +   R+ +    E    
Sbjct: 28  ICQSYTKYNWHLFLVCADSITCWRKVNIWSLLEELMDGAESFGDVFTRMWQRLLVEQLMS 87

Query: 183 VFAIIWSLWKERNSRVWKEK 242
                WS+WK+RN ++WK K
Sbjct: 88  FSMTSWSIWKKRNLKLWKNK 107


>ref|XP_003615631.1| hypothetical protein MTR_5g070290 [Medicago truncatula]
           gi|355516966|gb|AES98589.1| hypothetical protein
           MTR_5g070290 [Medicago truncatula]
          Length = 307

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/82 (32%), Positives = 47/82 (57%)
 Frame = +3

Query: 21  ENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKVFAIIW 200
           E+  H+F +CP AV+ W  + L  E++       +  E +  L+++ +  +S ++ AI W
Sbjct: 42  EDLTHVFFECPFAVQVWSMASLWREVQGAVTSSPSAIEAIFALLQSLSVTLSQRLAAIFW 101

Query: 201 SLWKERNSRVWKEKKMTAAWIV 266
           SLWK RN +VW++   T A +V
Sbjct: 102 SLWKHRNIKVWEDITETCATVV 123


>ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493156|gb|AES74359.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 846

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/82 (29%), Positives = 43/82 (52%)
 Frame = +3

Query: 18  IENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKVFAII 197
           +EN WHLF +C  ++ CW+   LR  + + +    + A  L  +   +   ++  VF +I
Sbjct: 650 VENDWHLFFQCTTSILCWDFVDLRSVVVDRSLCFSSAAAVLFDVCSREEESITVHVFMLI 709

Query: 198 WSLWKERNSRVWKEKKMTAAWI 263
           W++W+ RN  VW + +  A  I
Sbjct: 710 WAIWQNRNDSVWNQHRSNAEQI 731


>ref|XP_003604342.1| hypothetical protein MTR_4g009790 [Medicago truncatula]
           gi|355505397|gb|AES86539.1| hypothetical protein
           MTR_4g009790 [Medicago truncatula]
          Length = 156

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 21/92 (22%), Positives = 46/92 (50%)
 Frame = +3

Query: 6   CGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKV 185
           C   +E+ WH F+ C +A E W  +GL   ++       + A++ + + ++++ ++  +V
Sbjct: 64  CNTTVEDDWHAFVGCTMARESWNWAGLLTVLQLRVGTVSSLADFALDISRSESQDIDGRV 123

Query: 186 FAIIWSLWKERNSRVWKEKKMTAAWIVKVGAD 281
             + W +W  RN  +W +   T+  I +   D
Sbjct: 124 VLLFWQIWAARNDVIWNDAHHTSMSIGRTSLD 155


>gb|ABO80475.1| probable reverse transcriptase At2g02650 - , related [Medicago
           truncatula]
          Length = 169

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 19/78 (24%), Positives = 43/78 (55%)
 Frame = +3

Query: 6   CGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKV 185
           C   +E+ WH F+ C VA E W  +GL +  +       + A+++  + + ++ +++ +V
Sbjct: 77  CDTVVEDDWHAFVGCTVACESWYWAGLSIVRQSRVGTVSSLADFVFDICRLESRDIAGRV 136

Query: 186 FAIIWSLWKERNSRVWKE 239
            +++W +W  RN  +W +
Sbjct: 137 ASLLWKIWAARNDTIWND 154


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +3

Query: 6   CGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKV 185
           C    E+  HLF  C   V+ W+ S L  EI++     +T +  +  L++  T E  S++
Sbjct: 212 CSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLE-QSQI 270

Query: 186 FAIIWSLWKERNSRVWKEKKMTAAWIV 266
           F  +WSLWK RN +VW+ K  + A  V
Sbjct: 271 FVTMWSLWKRRNLKVWENKNESCAMTV 297


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +3

Query: 6   CGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSKV 185
           C    E+  HLF  C   V+ W+ S L  EI++     +T +  +  L++  T E  S++
Sbjct: 305 CSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLE-QSQI 363

Query: 186 FAIIWSLWKERNSRVWKEKKMTAAWIV 266
           F  +WSLWK RN +VW+ K  + A  V
Sbjct: 364 FVTMWSLWKRRNLKVWENKNESCAMTV 390


>ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 249

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/79 (27%), Positives = 42/79 (53%)
 Frame = +3

Query: 3   ICGCEIENSWHLFIKCPVAVECWEKSGLRVEIEETTNGCETFAEWLMRLMKNQT*EVSSK 182
           +C   +EN WH  + CP  + CW+ +G    I    +  ++F + + RL+ + +    S+
Sbjct: 59  LCLNNLENEWHCLVACPSNLVCWKLAGFWNVIRVQVDSADSFDDLIFRLLASISKAKISQ 118

Query: 183 VFAIIWSLWKERNSRVWKE 239
           V  ++W LW   N +VW++
Sbjct: 119 VVMLMWVLWWRSNGKVWED 137


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