BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00046414
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39384.1| hypothetical protein MIMGU_mgv1a025276mg [Mimulus...   186   2e-45
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
emb|CBI38358.3| unnamed protein product [Vitis vinifera]              157   1e-36
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   157   1e-36
ref|XP_007203686.1| hypothetical protein PRUPE_ppa026192mg [Prun...   154   9e-36
ref|XP_007156866.1| hypothetical protein PHAVU_002G024100g [Phas...   149   5e-34
gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]     148   9e-34
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ...   147   1e-33
ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...   142   6e-32
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...   142   6e-32
ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containi...   122   7e-26
ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containi...   121   1e-25
gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegi...   120   2e-25
ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea ma...   119   4e-25
ref|XP_004171057.1| PREDICTED: pentatricopeptide repeat-containi...   118   7e-25
ref|XP_004148060.1| PREDICTED: pentatricopeptide repeat-containi...   118   7e-25
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein...   115   5e-24
dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]    115   6e-24

>gb|EYU39384.1| hypothetical protein MIMGU_mgv1a025276mg [Mimulus guttatus]
          Length = 560

 Score =  186 bits (473), Expect = 2e-45
 Identities = 88/122 (72%), Positives = 100/122 (81%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MAEA+F RM  KNVVSW SM+ AYAKHGL+E A+  FD+MP +NVVSWNSMISCY QNGY
Sbjct: 189 MAEAVFSRMVGKNVVSWTSMVTAYAKHGLVELAKTTFDQMPIKNVVSWNSMISCYHQNGY 248

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
           YKESLELFYRM  SC+ PDETTLTS LS+CSQLGDLV GKKLH+Y   N + PS TL N+
Sbjct: 249 YKESLELFYRMLDSCIIPDETTLTSVLSACSQLGDLVTGKKLHEYIRGNIVLPSVTLSNS 308

Query: 363 LI 368
           L+
Sbjct: 309 LV 310



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/121 (31%), Positives = 63/121 (52%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           ++A+    T+ +V      I  Y   G IE A +IFD +  + +V+WNSMI  Y + G +
Sbjct: 58  SQALKSGFTESHVCVQNGFIAFYVGCGKIECARKIFDSIEFKTLVTWNSMIGGYAKTGRW 117

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           + +  LF  M    + PD  T  + +S CS++  L  G+ +H Y   NG+   + + NAL
Sbjct: 118 ENAFVLFDEMRERELEPDGHTFVNLISVCSRISGLKLGRLVHWYIEINGVFADSFVQNAL 177

Query: 366 I 368
           +
Sbjct: 178 L 178



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSS---- 224
           S+++ YAK G  E A  IF  +P +N VSWN++I+    +G+   ++ELF  M  S    
Sbjct: 308 SLVDMYAKCGSAETALDIFRNIPEKNTVSWNTIINALALHGFGYRAIELFQEMEGSNRRI 367

Query: 225 CVSPDETTLTSALSSCSQLGDLVQGKKLHD 314
            + PD  T T+ LS+C   G +  G+ L D
Sbjct: 368 IIKPDALTFTALLSACCHCGLVETGRYLFD 397


>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/121 (62%), Positives = 96/121 (79%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+AIF R  +KNVVSW SMI+AYA+HG IE A +IFD+MP +NVVSWNSMISCYL+ G Y
Sbjct: 243 AQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQY 302

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           +E+L+LF +M +S V PDE TL S L++CSQLGDLV GKK+H+Y L+N      TL+N+L
Sbjct: 303 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSL 362

Query: 366 I 368
           I
Sbjct: 363 I 363



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 38/104 (36%), Positives = 56/104 (53%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++I  Y   GLI  A ++FD++  + +VSWNSMI  Y   G +KE+  LF +M    + P
Sbjct: 128 ALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEP 187

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D  T  + LS CSQ  DL  G+ +H      G+     + NAL+
Sbjct: 188 DGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALV 231



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +3

Query: 42  VVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCS 221
           V  + S+I+ YAK G +  A  IF EMP +N+VSWN +I     +G   E+++LF  M +
Sbjct: 356 VTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQA 415

Query: 222 SCVSPDETTLTSALSSCSQLG 284
               PDE TLT  LS+CS  G
Sbjct: 416 DGTLPDEITLTGLLSACSHSG 436


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/121 (62%), Positives = 96/121 (79%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+AIF R  +KNVVSW SMI+AYA+HG IE A +IFD+MP +NVVSWNSMISCYL+ G Y
Sbjct: 176 AQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQY 235

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           +E+L+LF +M +S V PDE TL S L++CSQLGDLV GKK+H+Y L+N      TL+N+L
Sbjct: 236 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSL 295

Query: 366 I 368
           I
Sbjct: 296 I 296



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +3

Query: 42  VVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCS 221
           V  + S+I+ YAK G +  A  IF EMP +N+VSWN +I     +G   E+++LF  M +
Sbjct: 289 VTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQA 348

Query: 222 SCVSPDETTLTSALSSCSQLG 284
               PDE TLT  LS+CS  G
Sbjct: 349 DGTLPDEITLTGLLSACSHSG 369


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/121 (62%), Positives = 96/121 (79%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+AIF R  +KNVVSW SMI+AYA+HG IE A +IFD+MP +NVVSWNSMISCYL+ G Y
Sbjct: 315 AQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQY 374

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           +E+L+LF +M +S V PDE TL S L++CSQLGDLV GKK+H+Y L+N      TL+N+L
Sbjct: 375 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSL 434

Query: 366 I 368
           I
Sbjct: 435 I 435



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +3

Query: 42  VVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCS 221
           V  + S+I+ YAK G +  A  IF EMP +N+VSWN +I     +G   E+++LF  M +
Sbjct: 428 VTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQA 487

Query: 222 SCVSPDETTLTSALSSCSQLG 284
               PDE TLT  LS+CS  G
Sbjct: 488 DGTLPDEITLTGLLSACSHSG 508


>ref|XP_007203686.1| hypothetical protein PRUPE_ppa026192mg [Prunus persica]
           gi|462399217|gb|EMJ04885.1| hypothetical protein
           PRUPE_ppa026192mg [Prunus persica]
          Length = 559

 Score =  154 bits (390), Expect = 9e-36
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           +A+ IF RMT KNVVSW SM++AYAKHGLIE A+  FD+MP +NVVSWNSMIS Y++ G 
Sbjct: 188 LAQTIFYRMTHKNVVSWTSMVSAYAKHGLIEFAQEFFDQMPLKNVVSWNSMISYYVREGQ 247

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
            + +L+LF RM +S   PDE TL   LS+CSQ+GDLV GKK H Y  N+ +TPS TL+N+
Sbjct: 248 CRAALDLFQRMLNSGALPDEATLVFILSACSQIGDLVIGKKTHSYICNSNVTPSVTLFNS 307

Query: 363 LI 368
           LI
Sbjct: 308 LI 309



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/104 (42%), Positives = 58/104 (55%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++IN Y   G I  A  +FD+M  R++VSWNSMI  Y + G  K +  LF  M    V P
Sbjct: 74  ALINVYGVCGSIRSARNVFDDMSERSLVSWNSMIGGYARMGSCKGAFLLFRGMRDFGVGP 133

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D+ TL + LS CSQ  DL  G+ +H Y   +GI     L NAL+
Sbjct: 134 DKFTLVNLLSVCSQSCDLELGRYVHLYIEVSGIEVDQILRNALL 177



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/88 (37%), Positives = 52/88 (59%)
 Frame = +3

Query: 39  NVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMC 218
           +V  + S+I+ YAK G +  A  +F ++P +NVVSWN +I     +G   E++ +F +M 
Sbjct: 301 SVTLFNSLIDMYAKCGAVGIAMDLFTQIPEKNVVSWNVIIGALALHGCGFEAIRIFKQMQ 360

Query: 219 SSCVSPDETTLTSALSSCSQLGDLVQGK 302
           +  + PDE T T  LS+CS  G L  G+
Sbjct: 361 AGGIWPDEITFTGLLSACSHSGLLDMGR 388


>ref|XP_007156866.1| hypothetical protein PHAVU_002G024100g [Phaseolus vulgaris]
           gi|561030281|gb|ESW28860.1| hypothetical protein
           PHAVU_002G024100g [Phaseolus vulgaris]
          Length = 667

 Score =  149 bits (375), Expect = 5e-34
 Identities = 69/121 (57%), Positives = 90/121 (74%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+ +F RM DKNVVSW  M+NAYA HGLI+ A ++F++MP +NVVSWNS+I C++Q G Y
Sbjct: 292 AKRVFDRMLDKNVVSWTCMVNAYANHGLIDNAVQMFNQMPVKNVVSWNSIIWCHVQEGLY 351

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
            E+++LFYRMC S V PD+ TL + LS CS +GDL  GK+ H+Y   N IT S TL N+L
Sbjct: 352 TEAMQLFYRMCISGVIPDDGTLVNILSCCSHMGDLALGKQAHNYICGNNITVSVTLCNSL 411

Query: 366 I 368
           I
Sbjct: 412 I 412



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = +3

Query: 39  NVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMC 218
           +V    S+I+ YAK G ++ A  IF  MP +NVVSWN +I     +G+ +E++E F RM 
Sbjct: 404 SVTLCNSLIDMYAKCGALDTAMDIFFGMPEKNVVSWNVIIGALALHGFGEEAIENFRRMQ 463

Query: 219 SSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNN-GITPSATLWNALI 368
           +S + PDE T T  LS+CS  G +  G+   D   +  GI+P+   +  ++
Sbjct: 464 ASGLCPDEITFTGLLSACSHSGLVDMGRYYFDTMSSTFGISPNVAHYACMV 514



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/121 (34%), Positives = 63/121 (52%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+AI   M  K  V   S++  Y    LI  A ++FD++  R +VSWNSMI+ Y + G+ 
Sbjct: 161 AQAIKLGMGYKACVQ-NSILAVYVACRLIPSARQVFDDISDRTLVSWNSMIAGYSKIGHC 219

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
             ++ L   M    V PD  T  S LS  S+ G+L  G+ +H Y +   +   + + NAL
Sbjct: 220 HGAVMLLEEMQHQGVQPDVFTFVSLLSVSSKNGNLDLGRFVHLYIITTDVQIDSIVTNAL 279

Query: 366 I 368
           I
Sbjct: 280 I 280


>gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]
          Length = 610

 Score =  148 bits (373), Expect = 9e-34
 Identities = 69/121 (57%), Positives = 92/121 (76%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+ IF RM+DKNVVSW S++ AYAK+GL+E A+  FD+MP +NVVSWN+MISCY++ G +
Sbjct: 243 AQTIFDRMSDKNVVSWTSVVTAYAKNGLVESAKEFFDQMPVKNVVSWNAMISCYVREGQF 302

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           KE+L+LF  M  S V PDE TL   LS+CSQ+GDLV G+++H Y  N+ I  + TL N+L
Sbjct: 303 KEALDLFQEMRISNVFPDEATLVCVLSACSQIGDLVVGREIHKYLCNSNIALTITLSNSL 362

Query: 366 I 368
           I
Sbjct: 363 I 363



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/104 (38%), Positives = 59/104 (56%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           +++N Y   GLI+ A ++FDE+  R +VSWN+MI  Y + G+  E+  LF  M    + P
Sbjct: 128 ALMNVYVVSGLIKCARQVFDEIYERTLVSWNTMIGGYSRVGFCGEAFWLFQEMRELGMRP 187

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D+ T    LS CSQ  DL  G+ +H Y   +GI     + NAL+
Sbjct: 188 DKFTFVHLLSVCSQSCDLDFGRFVHLYVEISGIEIDQIVRNALL 231


>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513197|gb|AES94820.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  147 bits (371), Expect = 1e-33
 Identities = 69/121 (57%), Positives = 91/121 (75%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+++F +M DK+VVSW  MINAYA HGLI+ A   F++MP +NVVSWNS+I C++Q G Y
Sbjct: 289 AKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLY 348

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
            E+++LFYRMC S V  ++TTL + LSSCS +GDL  GK+ H Y  +N IT SATL NA+
Sbjct: 349 AEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAI 408

Query: 366 I 368
           I
Sbjct: 409 I 409



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++I+ YAK G ++ A  +F  MP +N VSWN +I     +GY KE++E+F +M +S V P
Sbjct: 407 AIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCP 466

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYF-LNNGITPSATLWNALI 368
           DE T T  LS+CS  G +  G+   +   L  GI+P    +  ++
Sbjct: 467 DEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMV 511



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/104 (34%), Positives = 60/104 (57%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           +++N Y   GLI  A R+FD++  R +VSWNSMI+ Y + G  +E++ +F  M    + P
Sbjct: 174 AILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEP 233

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D  TL   LS  ++ G+   G+ +H + +  GI   + + NAL+
Sbjct: 234 DVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALM 277


>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  142 bits (359), Expect = 4e-32
 Identities = 67/121 (55%), Positives = 90/121 (74%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           AE +F +M  KNVVSW SM+ AYAKHG I+ A + FD+MP +NVVSWNS+ISCY++ G  
Sbjct: 285 AEMVFNQMGCKNVVSWTSMVRAYAKHGCIDVAGKFFDQMPLKNVVSWNSLISCYVREGQC 344

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           +E+L+LF +M  S V+PDE TL   LS+CSQ+GDLV GK+ HD+   + I  + TL+N+L
Sbjct: 345 REALDLFQKMLDSGVAPDEATLVFILSACSQVGDLVIGKEAHDHISKSNIALTVTLYNSL 404

Query: 366 I 368
           I
Sbjct: 405 I 405



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/103 (43%), Positives = 61/103 (59%)
 Frame = +3

Query: 60  MINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSPD 239
           +IN Y+  GL+  A  +FDEM  R++VSWNSMI  Y   G +KE+  LF  M    V PD
Sbjct: 171 LINVYSVCGLVHCARNVFDEMSERSLVSWNSMIGGYSGVGCWKEAFGLFREMRGFGVEPD 230

Query: 240 ETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           + TL + LS CSQ  DL  G+ LH + + +G+     L NAL+
Sbjct: 231 KYTLVNLLSVCSQSCDLDLGRYLHHFVVVSGMVVDHILRNALL 273



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/87 (39%), Positives = 51/87 (58%)
 Frame = +3

Query: 42  VVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCS 221
           V  + S+I+ YAK G +  A  IF ++P +N+VSWN +IS    +GY  E++ +F +M  
Sbjct: 398 VTLYNSLIDMYAKCGAVRTAMDIFTQIPEKNLVSWNIIISALALHGYGSEAIRIFEQMQE 457

Query: 222 SCVSPDETTLTSALSSCSQLGDLVQGK 302
             + PDE T    LS+CS  G L  G+
Sbjct: 458 GGIWPDEITFIGLLSACSHSGLLDLGR 484


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/121 (57%), Positives = 87/121 (71%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A+ +F +M DK+VVSW SM+NAYA  GL+E A +IF+ MP +NVVSWNS+I C +Q G Y
Sbjct: 292 AKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQY 351

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
            E++ELF+RMC S V PD+ TL S LS CS  GDL  GK+ H Y  +N IT S TL N+L
Sbjct: 352 TEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSL 411

Query: 366 I 368
           I
Sbjct: 412 I 412



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 57/96 (59%)
 Frame = +3

Query: 39  NVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMC 218
           +V    S+I+ YAK G ++ A  IF  MP +NVVSWN +I     +G+ +E++E+F  M 
Sbjct: 404 SVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQ 463

Query: 219 SSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLN 326
           +S + PDE T T  LS+CS  G +  G+   D  ++
Sbjct: 464 ASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMIS 499



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/104 (36%), Positives = 60/104 (57%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           +++ AY    LI  A ++FD++  R +VSWNSMI+ Y + G+  E++ LF  M    V  
Sbjct: 177 AILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEA 236

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D  TL S LS+ S+  +L  G+ +H Y +  G+   + + NALI
Sbjct: 237 DVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALI 280


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/122 (56%), Positives = 89/122 (72%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           +AE +F++M +KNVVSW SMI AYAK GL+E A + FD+MP +NVVSWNSMIS Y+Q G 
Sbjct: 242 LAERVFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMPEKNVVSWNSMISSYVQGGQ 301

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
            +E+L+LF+ M S  V P+E TL S LS+C Q+GDLV GKK+H+Y        S TL N+
Sbjct: 302 CREALDLFHEMHSFRVVPNEATLLSVLSACGQIGDLVMGKKIHNYICGTSSMYSVTLCNS 361

Query: 363 LI 368
           LI
Sbjct: 362 LI 363



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
 Frame = +3

Query: 39  NVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMC 218
           +V    S+I+ YAK G +  A  +F+EMP +N+VSWN +I     +GY  E++ELF +M 
Sbjct: 355 SVTLCNSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGALALHGYGVEAVELFRKMQ 414

Query: 219 SSCVSPDETTLTSALSSCSQLGDLVQG-------KKLHDYFLNNG 332
           ++ V PDE T    LS+CS  G +  G         ++ +F N+G
Sbjct: 415 AAGVWPDEITFMGLLSACSHSGLVDSGLYYFDKMSSIYVWFQNHG 459



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/103 (38%), Positives = 55/103 (53%)
 Frame = +3

Query: 60  MINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSPD 239
           +INAY   G I  A ++FD+M  R++VSWNSMI  Y + G+ KE   LF  M       D
Sbjct: 129 LINAYIACGFIRYARKMFDDMSERSLVSWNSMIGGYSKLGWCKEVFLLFKEMREIGTEAD 188

Query: 240 ETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           + TL + L  CS+  D+  G+ +H Y    G+       NALI
Sbjct: 189 DFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKIDLVARNALI 231


>ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Setaria italica]
          Length = 643

 Score =  122 bits (305), Expect = 7e-26
 Identities = 61/122 (50%), Positives = 80/122 (65%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MA   F  M  KNVVSW SM+ A AKHG  + A   FD+MP RN+VSWN+MISCY+Q G 
Sbjct: 271 MARRCFEMMPLKNVVSWTSMLCAQAKHGSADAARDWFDQMPERNIVSWNAMISCYVQCGQ 330

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
             E+L+L+  M S  ++PDE TL + LS+C Q+GDL  GK +H Y  +N   P  +L N+
Sbjct: 331 CHEALDLYNHMQSQGLAPDEVTLVAILSACGQIGDLTVGKIIHLYIRDNISNPDISLVNS 390

Query: 363 LI 368
           L+
Sbjct: 391 LV 392



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           +++++YA  G +  + R  DEM  RNVVSWNSMI  Y Q G  +E  +LF  M    V  
Sbjct: 157 ALLHSYASAGSLADSRRFLDEMVERNVVSWNSMIGGYAQAGDTREVRKLFGEMRREGVLE 216

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D+ TL S L +CSQ G+L  G+ +H + L +G      L NAL+
Sbjct: 217 DKFTLVSLLLACSQEGNLEFGRLVHCHMLVSGSRVDLILGNALV 260



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/82 (42%), Positives = 48/82 (58%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           S+++ YAK G ++ A  +F EM  RNVVSWN +I     +G   +S+ LF  M S   SP
Sbjct: 390 SLVDMYAKCGQVDTAISLFSEMCHRNVVSWNVIIGGLAMHGRALDSIMLFRSMVSDSFSP 449

Query: 237 DETTLTSALSSCSQLGDLVQGK 302
           DE T  + LS+CS  G L  G+
Sbjct: 450 DEITFVALLSACSHGGLLEAGQ 471


>ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 657

 Score =  121 bits (303), Expect = 1e-25
 Identities = 60/122 (49%), Positives = 79/122 (64%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MA   F  M  KNVV+W SM+ A AKHG ++     F++MP RN+VSWN+MISCY+Q G 
Sbjct: 268 MAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGR 327

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
             E+L+L+ RM S  ++PDE TL   LS+C Q GDL  GK +H Y  +N   P  TL N+
Sbjct: 328 LHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNS 387

Query: 363 LI 368
           L+
Sbjct: 388 LL 389



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 39/104 (37%), Positives = 56/104 (53%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++++ +A  G +  + R F EM  RNVVSWN+MI  Y Q G   E+  LF  M    +  
Sbjct: 154 ALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLA 213

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D  TL S L +CS  G+L  G+ +H + L +G      L NAL+
Sbjct: 214 DVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALL 257



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/90 (37%), Positives = 50/90 (55%)
 Frame = +3

Query: 33  DKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYR 212
           D  V    S+++ YA+ G ++ A  +F EMP +NV+SWN +I     +G  +E++  F  
Sbjct: 379 DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRT 438

Query: 213 MCSSCVSPDETTLTSALSSCSQLGDLVQGK 302
           M S   SPDE T    LS+CS  G L  G+
Sbjct: 439 MVSDAFSPDEITFVGLLSACSHGGLLEAGE 468


>gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 634

 Score =  120 bits (301), Expect = 2e-25
 Identities = 59/122 (48%), Positives = 80/122 (65%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MA   F  M  KNVVSW SM+ A AKHG ++ A   F++MP RN+VSWN+MISCY+Q G 
Sbjct: 262 MAHRCFDMMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIVSWNAMISCYVQGGR 321

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
           ++E+L ++ RM S  ++PDE TL   LS+  Q GDL  G+ +H Y  +N   P  TL N+
Sbjct: 322 FRETLGIYNRMKSLGLTPDEATLAGVLSAHGQNGDLASGRMIHCYIKDNFSDPGVTLLNS 381

Query: 363 LI 368
           L+
Sbjct: 382 LL 383



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/91 (35%), Positives = 50/91 (54%)
 Frame = +3

Query: 30  TDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFY 209
           +D  V    S+++ YA+ G ++ +  +F EMP +N +SWN +I     +G  +E++  F 
Sbjct: 372 SDPGVTLLNSLLDMYARCGQVDTSISLFTEMPNKNTISWNVLIGALAMHGRAQEAVMFFR 431

Query: 210 RMCSSCVSPDETTLTSALSSCSQLGDLVQGK 302
            M S   SPDE T    LS+CS  G L  G+
Sbjct: 432 AMISDAFSPDEITFVGLLSACSHGGLLEDGQ 462



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = +3

Query: 36  KNVVSWKSMINAYAKHGLIEPAERIFDEM-PARNVVSWNSMISCYLQNGYYKESLELFYR 212
           + V    +++++YA  G +  + R F EM P RNVVSWN+MI    Q G   E   LF  
Sbjct: 140 RQVFVGNALLHSYASVGSLRDSRRFFAEMAPDRNVVSWNTMIGGCAQAGETSEVCALFGE 199

Query: 213 MCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           M    V  D  T  S L  CS  G+L  G+ +H + L +G      L NAL+
Sbjct: 200 MRRQGVLADVFTFVSLLLVCSSEGNLEVGRLVHCHMLASGSRVDLILGNALV 251


>ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
           gi|194706828|gb|ACF87498.1| unknown [Zea mays]
          Length = 570

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/122 (48%), Positives = 78/122 (63%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MA   F  M  K+VVSW SM+ A  KHG ++ A   FD MP RN VSWN+MISCY+Q G 
Sbjct: 199 MARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQ 258

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
           Y E+L+L+ +M S   +PDE TL   LS+C ++GDL  GK +H Y  +N   P  +L N+
Sbjct: 259 YHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINS 318

Query: 363 LI 368
           L+
Sbjct: 319 LL 320



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/104 (41%), Positives = 58/104 (55%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           +++++YA  G +  + R FDEM  RNVVSWNSMI  Y Q G  +E+  LF  M       
Sbjct: 85  ALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLG 144

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           DE TL S L +CSQ G+L  G+ +H   L +G      L  AL+
Sbjct: 145 DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALV 188



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/82 (40%), Positives = 47/82 (57%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           S+++ YAK G ++ A R+F EM  RNVVSWN +I     +G   +++  F  M  +  SP
Sbjct: 318 SLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRN-TSP 376

Query: 237 DETTLTSALSSCSQLGDLVQGK 302
           D  T  + LSSCS  G L  G+
Sbjct: 377 DGITFVALLSSCSHGGLLETGQ 398


>ref|XP_004171057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 415

 Score =  118 bits (296), Expect = 7e-25
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = +3

Query: 69  AYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSPDETT 248
           AY+KHGLI  A  IFD++P +NV+SWNSMI CY+Q+G  KE+L LF +MC + + PDETT
Sbjct: 234 AYSKHGLIRHAREIFDQIPEKNVISWNSMILCYVQDGQCKEALLLFQQMCETTIIPDETT 293

Query: 249 LTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           L S LS+CSQ+GDL  G+K H     + I  + TL N+L+
Sbjct: 294 LVSVLSACSQIGDLAMGEKTHGCICRHSIVITVTLLNSLV 333



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 45/104 (43%), Positives = 59/104 (56%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++INAYA  G ++ A ++FDEM  R +VSWNSMI  Y +NG  K +  LF  M  +   P
Sbjct: 128 ALINAYAVFGFVQCAYQVFDEMSNRTLVSWNSMIGGYFRNGLCKGAFLLFREMRETGFQP 187

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D+ TL   LS CS+   L  GK +H Y    GI     L NAL+
Sbjct: 188 DKFTLVHLLSICSKSCRLDIGKSVHHYVEITGIEFDLILRNALL 231


>ref|XP_004148060.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 471

 Score =  118 bits (296), Expect = 7e-25
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = +3

Query: 69  AYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSPDETT 248
           AY+KHGLI  A  IFD++P +NV+SWNSMI CY+Q+G  KE+L LF +MC + + PDETT
Sbjct: 290 AYSKHGLIRHAREIFDQIPEKNVISWNSMILCYVQDGQCKEALLLFQQMCETTIIPDETT 349

Query: 249 LTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           L S LS+CSQ+GDL  G+K H     + I  + TL N+L+
Sbjct: 350 LVSVLSACSQIGDLAMGEKTHGCICRHSIVITVTLLNSLV 389



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 45/104 (43%), Positives = 59/104 (56%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++INAYA  G ++ A ++FDEM  R +VSWNSMI  Y +NG  K +  LF  M  +   P
Sbjct: 184 ALINAYAVFGFVQCAYQVFDEMSNRTLVSWNSMIGGYFRNGLCKGAFLLFREMRETGFQP 243

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           D+ TL   LS CS+   L  GK +H Y    GI     L NAL+
Sbjct: 244 DKFTLVHLLSICSKSCRLDIGKSVHHYVEITGIEFDLILRNALL 287


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  117 bits (293), Expect = 2e-24
 Identities = 59/122 (48%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A ++F RM  ++V+SW +MI+ YAK G I+ A  +FDEMP ++VV++N++++ Y QNGYY
Sbjct: 275 AHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYY 334

Query: 186 KESLELFYRM-CSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
            E+LE+F+ M   S +SPDETTL  ALS+ SQLG + +   +H+YFL NGI+ +  +  A
Sbjct: 335 TEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVA 394

Query: 363 LI 368
           LI
Sbjct: 395 LI 396


>ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 578

 Score =  115 bits (289), Expect = 5e-24
 Identities = 55/121 (45%), Positives = 79/121 (65%)
 Frame = +3

Query: 6   AEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYY 185
           A  +F  M +KN   W SMI+ Y K G ++ A  IFD +P RN+V+WNS+IS Y QNG+ 
Sbjct: 221 ARELFEMMPEKNFYVWSSMISGYCKRGDVKEARNIFDRIPVRNLVNWNSLISGYAQNGFC 280

Query: 186 KESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNAL 365
           +++LE+F +M S    PDE T+TS LS+C+QLG+L  GK++H      GI  +  + NAL
Sbjct: 281 EKALEMFRKMQSEGFEPDEVTITSILSACAQLGELDVGKEIHYLIKEKGIVVNQFVLNAL 340

Query: 366 I 368
           +
Sbjct: 341 L 341



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/86 (36%), Positives = 53/86 (61%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           S++N Y+K G +  + ++FDEMP RNVV+WN+MI  YL+NG  K +L+LF  +    V  
Sbjct: 111 SLLNMYSKCGNLIDSRKVFDEMPERNVVTWNAMIGGYLKNGDTKSALDLFENI---LVGR 167

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHD 314
           +  T    ++  ++ GD ++ ++  D
Sbjct: 168 NSVTWIEMINGFAKNGDTLKARRFFD 193



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = +3

Query: 57  SMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFYRMCSSCVSP 236
           ++++ YAK G +  A  IF+ M  R    WNSMIS +  +G   E+LE F RM  S   P
Sbjct: 339 ALLDMYAKCGDLAHARLIFEGMSRRTSACWNSMISGFALHGQSSEALEYFRRMEQSNEMP 398

Query: 237 DETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           DE T  S LS+C+  G +  G  +       G+ PS   +  L+
Sbjct: 399 DEITFLSLLSACAHGGFVDAGLDIFSKMEKYGLVPSVKHYGCLV 442



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
 Frame = +3

Query: 27  MTDKNVVSWKSMINAYAKHGLIEPAERIFDEMP--ARNVVSWNSMISCYLQNGYYKESLE 200
           +  +N V+W  MIN +AK+G    A R FD++P   RNVV+W  M+  Y  NG  + + E
Sbjct: 164 LVGRNSVTWIEMINGFAKNGDTLKARRFFDKVPLELRNVVTWTVMVDGYTANGELEAARE 223

Query: 201 LFYRMCSSCVSPDET--TLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           LF  M      P++     +S +S   + GD+ + + + D      +      WN+LI
Sbjct: 224 LFEMM------PEKNFYVWSSMISGYCKRGDVKEARNIFDRIPVRNLVN----WNSLI 271


>dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 634

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/122 (47%), Positives = 78/122 (63%)
 Frame = +3

Query: 3   MAEAIFRRMTDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGY 182
           MA   F  M  KNVVSW SM+ A AKHG ++ A   F++MP RN++SWN+MISCY+Q G 
Sbjct: 262 MAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGR 321

Query: 183 YKESLELFYRMCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNA 362
           + E+L L+ RM S  ++PDE TL   LS   Q GDL  G+ +H Y  ++   P  T+ N+
Sbjct: 322 FPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNS 381

Query: 363 LI 368
           LI
Sbjct: 382 LI 383



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/91 (36%), Positives = 50/91 (54%)
 Frame = +3

Query: 30  TDKNVVSWKSMINAYAKHGLIEPAERIFDEMPARNVVSWNSMISCYLQNGYYKESLELFY 209
           +D  V    S+I+ YA+ G ++ +  +F EMP +N +SWN +I     +G  +E++  F 
Sbjct: 372 SDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFR 431

Query: 210 RMCSSCVSPDETTLTSALSSCSQLGDLVQGK 302
            M S   SPDE T    LS+CS  G L  G+
Sbjct: 432 AMVSDAFSPDEITFVGLLSACSHGGLLEDGQ 462



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = +3

Query: 36  KNVVSWKSMINAYAKHGLIEPAERIFDEM-PARNVVSWNSMISCYLQNGYYKESLELFYR 212
           + V    +++++ A  G +  + R+F EM P RNVVSWN+MI    Q G   E+  LF  
Sbjct: 140 RQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFRE 199

Query: 213 MCSSCVSPDETTLTSALSSCSQLGDLVQGKKLHDYFLNNGITPSATLWNALI 368
           M    V  D  T  S L  CS+ G+L  G+ +H + L +G      L NAL+
Sbjct: 200 MRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALV 251