BLASTX nr result

ID: Mentha27_contig00045790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00045790
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588297.1| Cytochrome c biogenesis FN [Medicago truncat...    46   7e-10
ref|XP_006842416.1| hypothetical protein AMTR_s04495p00001190, p...    61   1e-07
ref|XP_003596847.1| hypothetical protein MTR_2g086750 [Medicago ...    60   3e-07
ref|YP_006666116.1| CcmFN (mitochondrion) [Malus domestica] gi|4...    58   1e-06

>ref|XP_003588297.1| Cytochrome c biogenesis FN [Medicago truncatula]
           gi|355477345|gb|AES58548.1| Cytochrome c biogenesis FN
           [Medicago truncatula]
          Length = 856

 Score = 46.2 bits (108), Expect(2) = 7e-10
 Identities = 26/45 (57%), Positives = 28/45 (62%)
 Frame = -3

Query: 276 WASFDASTPNKLRVEIVELSLEK*VSWSLFGHKDNRSS*VRGGPA 142
           WAS DA TPNKL V IV+L        SLFGHKDN S  +R G A
Sbjct: 259 WASLDAPTPNKLLVGIVKL--------SLFGHKDNSSYLIRSGAA 295



 Score = 42.7 bits (99), Expect(2) = 7e-10
 Identities = 27/54 (50%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 160 GQGRAGHRFESCHLSCGSSCGYRMMGITKQKF*NEHEMSI-YEFFHYSLFLGLF 2
           GQGRAGHRFES                      +EHEM I YEFFH SLF GLF
Sbjct: 328 GQGRAGHRFES----------------------SEHEMYIIYEFFHLSLFPGLF 359


>ref|XP_006842416.1| hypothetical protein AMTR_s04495p00001190, partial [Amborella
           trichopoda] gi|548844500|gb|ERN04091.1| hypothetical
           protein AMTR_s04495p00001190, partial [Amborella
           trichopoda]
          Length = 204

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -2

Query: 160 GQGRAGHRFESCHLSCGSSCGYRMMGITKQKF*NEHEMSIYEFFHYSLFLGLF 2
           GQG AGHRF+S HL CGSSCGY+MM +++     EHEMSI E  +  LF GLF
Sbjct: 110 GQGWAGHRFKSYHLYCGSSCGYQMM-LSQLILKYEHEMSINELSYSLLFSGLF 161


>ref|XP_003596847.1| hypothetical protein MTR_2g086750 [Medicago truncatula]
           gi|355485895|gb|AES67098.1| hypothetical protein
           MTR_2g086750 [Medicago truncatula]
          Length = 202

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 85  PSSGNHRMIHKKGGRIRTYGRPAPDL 162
           PSSGNHRMIHKKGGRIRTYGRPAPDL
Sbjct: 25  PSSGNHRMIHKKGGRIRTYGRPAPDL 50


>ref|YP_006666116.1| CcmFN (mitochondrion) [Malus domestica]
          gi|401661921|emb|CBX33376.1| ccmFN (mitochondrion)
          [Malus domestica]
          Length = 587

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = -2

Query: 91 MMGITKQKF*NEHEMSIYEFFHYSLFLGLF 2
          MMGITKQKF NEHEMSIYE FHYSLF GLF
Sbjct: 1  MMGITKQKFLNEHEMSIYELFHYSLFPGLF 30


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