BLASTX nr result
ID: Mentha27_contig00045774
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00045774
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61670.1| hypothetical protein VITISV_040427 [Vitis vinifera] 58 9e-10
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 54 6e-09
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 54 6e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 55 6e-09
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 53 7e-09
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 53 9e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 53 1e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 54 2e-08
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 51 6e-08
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 51 2e-07
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 50 2e-07
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 49 3e-07
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 49 3e-07
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 48 8e-07
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 47 8e-07
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 50 1e-06
ref|XP_003571785.1| PREDICTED: acylamino-acid-releasing enzyme-l... 50 1e-06
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 45 2e-06
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 48 2e-06
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 48 3e-06
>emb|CAN61670.1| hypothetical protein VITISV_040427 [Vitis vinifera]
Length = 577
Score = 57.8 bits (138), Expect(2) = 9e-10
Identities = 35/60 (58%), Positives = 40/60 (66%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNSSVTKGEDLLARG 182
LIL CLL SSY T RDTIL+S DT T+ DALFSKEKMK+LV S K + L+ G
Sbjct: 91 LILLCLLSSSYVTFRDTILYSRDTL--TLKEVFDALFSKEKMKQLVVRSEAKAKSLIIWG 148
Score = 30.8 bits (68), Expect(2) = 9e-10
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 188 QERNSGGERKGRSK*RNPNITCNYCCKPD 274
Q+RNS G+ KGRSK N + T Y K D
Sbjct: 151 QQRNSSGDAKGRSKSNNKDKTYKYSKKND 179
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 53.9 bits (128), Expect(2) = 6e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+SHDT + +DAL +KEKMK++V S S ++ E L+
Sbjct: 180 LILLCSLPSSYANFRDTILYSHDTL--ILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVV 237
Query: 177 RG 182
RG
Sbjct: 238 RG 239
Score = 32.0 bits (71), Expect(2) = 6e-09
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GRSK R +C YC + H +ECW
Sbjct: 247 KNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECW 285
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 53.9 bits (128), Expect(2) = 6e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+SHDT + +DAL +KEKMK++V S S ++ E L+
Sbjct: 180 LILLCSLPSSYANFRDTILYSHDTL--ILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVV 237
Query: 177 RG 182
RG
Sbjct: 238 RG 239
Score = 32.0 bits (71), Expect(2) = 6e-09
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GRSK R +C YC + H +ECW
Sbjct: 247 KNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECW 285
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 55.1 bits (131), Expect(2) = 6e-09
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEKMK++V S S ++ E L+
Sbjct: 145 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVV 202
Query: 177 RGSHK 191
RGS +
Sbjct: 203 RGSQQ 207
Score = 30.8 bits (68), Expect(2) = 6e-09
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 173 SSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
++ K ++++S R GRSK R +C YC + H ++CW
Sbjct: 211 TNNKSRDKSSSSYR-GRSKSRGRYKSCKYCKRDGHDISKCW 250
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 52.8 bits (125), Expect(2) = 7e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEKMK++V S S ++ E L+
Sbjct: 87 LILLCSLPSSYANFRDTILYSRDTL--TLQEVYDALHAKEKMKKMVPSEGSNSQPESLVV 144
Query: 177 RG 182
RG
Sbjct: 145 RG 146
Score = 32.7 bits (73), Expect(2) = 7e-09
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 173 SSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
+ K ++++S G R GRSK R +C YC + H ++CW
Sbjct: 153 TDNKSRDKSSSGYR-GRSKSRGRYKSCKYCKRGGHDISDCW 192
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 53.1 bits (126), Expect(2) = 9e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEKMK++V S S ++ E L+
Sbjct: 87 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHTKEKMKKMVPSEGSNSQAEGLVV 144
Query: 177 RG 182
RG
Sbjct: 145 RG 146
Score = 32.0 bits (71), Expect(2) = 9e-09
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GRSK R +C YC + H +ECW
Sbjct: 154 KNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECW 192
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEKMK++V S S ++ E L+
Sbjct: 54 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVV 111
Query: 177 RG 182
RG
Sbjct: 112 RG 113
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSGGERK--------GRSK*RNPNITCNYCCKPDHIKTECW 295
Q G + QE+N+ + + GRSK R +C YC + H +ECW
Sbjct: 105 QAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECW 159
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEKMK++V S S ++ E L+
Sbjct: 130 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVV 187
Query: 177 RGSHK 191
+GS +
Sbjct: 188 QGSQQ 192
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 173 SSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
++ K ++++S R GRSK R +C YC + H ++CW
Sbjct: 196 TNNKSRDKSSSSYR-GRSKSRGRYKSCKYCKRDGHDISKCW 235
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 51.2 bits (121), Expect(2) = 6e-08
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY RDTIL SHD T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 69 LLLLCSLPSSYANFRDTILLSHDEL--TLAEVYEALQNREKMKGMVQSDASSSKGEALQV 126
Query: 177 RG 182
RG
Sbjct: 127 RG 128
Score = 31.2 bits (69), Expect(2) = 6e-08
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
Q RG F R + N + + R K C YC K +H ECW
Sbjct: 125 QVRGRFERRTYNDSNDHDKSQSRGK-----KLCKYCKKKNHFIEECW 166
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DA +KEKMK++V S S ++ E L+
Sbjct: 145 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDASHAKEKMKKMVPSEGSNSQAEGLVV 202
Query: 177 RG 182
RG
Sbjct: 203 RG 204
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSGGERK--------GRSK*RNPNITCNYCCKPDHIKTECW 295
Q G + QE+N+ + + GRSK R +C YC + H +ECW
Sbjct: 196 QAEGLVVRGRQQEKNTKNQSRDKSLSSYHGRSKSRCRYKSCKYCKRDGHDISECW 250
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY R TIL+S DT T+ +DA +KEKMK++V S S ++ E L+
Sbjct: 145 LILLCSLPSSYANFRGTILYSRDTL--TLKEVYDAFHAKEKMKKMVTSEGSNSQAEGLVV 202
Query: 177 RG 182
RG
Sbjct: 203 RG 204
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GR+K R +C YC + H +ECW
Sbjct: 212 KNQSRDKSSSSYRGRTKSRGRYKSCKYCKRDGHDISECW 250
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL KEKMK++V S S ++ E L+
Sbjct: 352 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIV 409
Query: 177 RG 182
G
Sbjct: 410 WG 411
Score = 30.8 bits (68), Expect(2) = 3e-07
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GRSK R +C YC + H ECW
Sbjct: 419 KNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECW 457
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL KEKMK++V S S ++ E L+
Sbjct: 145 LILLCSLPSSYANFRDTILYSRDTL--TLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIV 202
Query: 177 RG 182
G
Sbjct: 203 WG 204
Score = 30.8 bits (68), Expect(2) = 3e-07
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 KPQERN-SGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
K Q R+ S +GRSK R +C YC + H ECW
Sbjct: 212 KNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECW 250
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 48.1 bits (113), Expect(2) = 8e-07
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY RDTIL S D T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 147 LLLLCSLPSSYANFRDTILLSRDEL--TLAEVYEALQNREKMKGMVQSDASSSKGEALQV 204
Query: 177 RG 182
RG
Sbjct: 205 RG 206
Score = 30.4 bits (67), Expect(2) = 8e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 209 ERKGRSK*RNPNITCNYCCKPDHIKTECW 295
+ +GRSK R C YC K +H ECW
Sbjct: 223 QSRGRSKSRGKKF-CKYCKKKNHFIEECW 250
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 47.0 bits (110), Expect(2) = 8e-07
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY RDTIL S S T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 42 LLLLCSLPSSYANFRDTILLSR--SELTLAEVYEALQNREKMKGMVQSDASSSKGEALQV 99
Query: 177 RG 182
RG
Sbjct: 100 RG 101
Score = 31.6 bits (70), Expect(2) = 8e-07
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSG--GERKGRSK*RNPNITCNYCCKPDHIKTECW 295
Q RG R + N + +GRSK R C YC K +H ECW
Sbjct: 98 QVRGRSEQRTYNDSNDRDKNQSRGRSKSRGKKF-CKYCKKKNHFIEECW 145
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 50.4 bits (119), Expect(2) = 1e-06
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
LIL C LPSSY RDTIL+S DT T+ +DAL +KEK+K++V S S ++ E L+
Sbjct: 145 LILLCSLPSSYANFRDTILYSCDTL--TLKEVYDALHAKEKIKKMVPSEGSNSQAEGLVV 202
Query: 177 RG 182
RG
Sbjct: 203 RG 204
Score = 27.7 bits (60), Expect(2) = 1e-06
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 173 SSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
++ K ++++S R GRSK R +C Y + H +ECW
Sbjct: 211 TNSKSRDKSSSSYR-GRSKSRGRYKSCKYYKRDGHDISECW 250
>ref|XP_003571785.1| PREDICTED: acylamino-acid-releasing enzyme-like [Brachypodium
distachyon]
Length = 1011
Score = 50.4 bits (119), Expect(2) = 1e-06
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFS--HDALFSKEKMKELVN---SSVTKGED 167
L+L C LPSSY RDTIL+ SRDT++ + ++AL SKEKMK +V+ SS ++ E
Sbjct: 12 LMLLCSLPSSYTNFRDTILY----SRDTLILNEVYEALHSKEKMKHMVSHVGSSSSQDEG 67
Query: 168 LLARG 182
L RG
Sbjct: 68 LSVRG 72
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 158 RRGSFSSRKPQERNSGGERKGRSK*RNPNITCNYCCKPDHIKTECW 295
R SS S +GRSK R +C YC K + +EC+
Sbjct: 73 RTNERSSNNGNRDKSPNGYRGRSKSRGKYKSCKYCKKDGYEISECY 118
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY R TIL S D T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 147 LLLLCSLPSSYANFRHTILLSRDEL--TLAEVYEALQNREKMKGMVQSYASSSKGEALQV 204
Query: 177 RG 182
RG
Sbjct: 205 RG 206
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSG--GERKGRSK*RNPNITCNYCCKPDHIKTECW 295
Q RG R + N + +GRSK R C YC K +H ECW
Sbjct: 203 QVRGRSEQRTYNDSNDHDKSQSRGRSKSRGKKF-CKYCKKKNHFIEECW 250
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 47.8 bits (112), Expect(2) = 2e-06
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY RDTIL S D T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 147 LLLLCSLPSSYENFRDTILLSRDEL--TLAEVYEALQNREKMKGMVQSDASSSKGEALQV 204
Query: 177 RG 182
+G
Sbjct: 205 KG 206
Score = 29.3 bits (64), Expect(2) = 2e-06
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSGGERK--GRSK*RNPNITCNYCCKPDHIKTECW 295
Q +G R + N + K GRSK R C YC K H ECW
Sbjct: 203 QVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKF-CKYCKKKIHFIKECW 250
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 48.1 bits (113), Expect(2) = 3e-06
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 LILQCLLPSSYNTSRDTILFSHDTSRDTILFSHDALFSKEKMKELVNS--SVTKGEDLLA 176
L+L C LPSSY RDTIL S D T+ ++AL ++EKMK +V S S +KGE L
Sbjct: 144 LLLLCSLPSSYANFRDTILLSRDEL--TLAEVYEALQNREKMKGMVQSDASSSKGEALQV 201
Query: 177 RG 182
RG
Sbjct: 202 RG 203
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 155 QRRGSFSSRKPQERNSG--GERKGRSK*RNPNITCNYCCKPDHIKTECW 295
Q RG R + N + +G SK R C YC K +H ECW
Sbjct: 200 QVRGRSEQRTYNDSNDRDKSQSRGCSKSRGKKF-CKYCKKKNHFIEECW 247