BLASTX nr result
ID: Mentha27_contig00045424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00045424
(221 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 92 6e-17
gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 92 6e-17
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 91 2e-16
pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 87 2e-15
pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 87 2e-15
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 74 2e-11
ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 67 2e-09
gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 65 1e-08
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 64 3e-08
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 64 3e-08
gb|EYU27343.1| hypothetical protein MIMGU_mgv1a027131mg, partial... 63 4e-08
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 60 2e-07
ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prun... 59 7e-07
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 58 1e-06
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic... 58 2e-06
ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 57 3e-06
gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa] 57 3e-06
gb|AFK47692.1| unknown [Medicago truncatula] 56 4e-06
gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 55 8e-06
ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theo... 55 8e-06
>gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 92.4 bits (228), Expect = 6e-17
Identities = 45/60 (75%), Positives = 45/60 (75%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTF ELVGGDR
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
>gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 92.4 bits (228), Expect = 6e-17
Identities = 45/60 (75%), Positives = 45/60 (75%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTF ELVGGDR
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit
[Mentha x piperita]
Length = 313
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/60 (73%), Positives = 45/60 (75%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
QSQPYWAAIEADI+RYLKKSITIRPPETVFGPMHHLTF ELVGGDR
Sbjct: 47 QSQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDR 106
>pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands gi|310942868|pdb|3OAC|B Chain B,
Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands
Length = 264
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +1
Query: 46 QPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
QPYWAAIEADI+RYLKKSITIRPPETVFGPMHHLTF ELVGGDR
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDR 59
>pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (i)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With Magnesium
And Gpp
Length = 274
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +1
Query: 46 QPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
QPYWAAIEADI+RYLKKSITIRPPETVFGPMHHLTF ELVGGDR
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDR 59
>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
Q+ YWAAIEADID YLKKSI IR PETVF PMHHLTF ELVGG+R
Sbjct: 46 QNHSYWAAIEADIDTYLKKSIAIRSPETVFEPMHHLTFAAPRTAASAICVAACELVGGER 105
>ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Solanum lycopersicum]
Length = 269
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
Q+Q YWA+IE+DI+ +LKK+I+IR PE+VF PMH+LTF ELVGGDR
Sbjct: 3 QNQSYWASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDR 62
>gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia]
Length = 295
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
Q+ YW++I+ADI+ YLKK+I IR PETVF PMHHLTF EL GG+R
Sbjct: 28 QNASYWSSIDADINTYLKKAIPIRSPETVFEPMHHLTFAAPTTTASALCVAACELFGGNR 87
>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
Chain A, Crystal Structure Of Geranyl Diphosphate
Synthase Small Subunit From Antirrhinum Majus
Length = 273
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
++Q Y A IE+DI+ YLKK+I IR PE+VF PMHHLTF ELVGGDR
Sbjct: 5 RTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDR 64
>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
++Q Y A IE+DI+ YLKK+I IR PE+VF PMHHLTF ELVGGDR
Sbjct: 37 RTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDR 96
>gb|EYU27343.1| hypothetical protein MIMGU_mgv1a027131mg, partial [Mimulus
guttatus]
Length = 274
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/56 (53%), Positives = 34/56 (60%)
Frame = +1
Query: 52 YWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
YWA+IEADID YLKK+I + P +V GPMHHL F ELVGGDR
Sbjct: 6 YWASIEADIDTYLKKAIPVNSPASVVGPMHHLIFAAPRTGAAALCVAACELVGGDR 61
>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cicer arietinum]
Length = 302
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 43 SQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
+ PYWA+++ADI+ +LK+SITI+ P VF PMHHL F ELVGG R
Sbjct: 47 THPYWASLQADIEAHLKQSITIKEPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQR 105
>ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
gi|462410393|gb|EMJ15727.1| hypothetical protein
PRUPE_ppa015010mg [Prunus persica]
Length = 296
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 40 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
Q PYWA++ A+I+ +LK+ I +RPP +VF PMHHL F ELVGG R
Sbjct: 36 QDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSAPPSPGPALCVAACELVGGHR 95
>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1
Query: 52 YWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
YW I ADI+ +LK++I +RPP VF PMHHLTF ELVGG R
Sbjct: 48 YWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACELVGGSR 103
>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
synthase [Medicago truncatula]
Length = 297
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +1
Query: 49 PYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
PYWA++ ADI+ +LK++ITI+ P VF PMHHL F ELVGG R
Sbjct: 45 PYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQR 101
>ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa]
gi|550321901|gb|EEF06199.2| hypothetical protein
POPTR_0015s04050g [Populus trichocarpa]
Length = 312
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +1
Query: 43 SQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
++ YW ++ +ID +LK++I IRPP +VF PMHHLTF ELVGG+R
Sbjct: 49 NKSYWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNR 107
>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
Length = 301
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +1
Query: 49 PYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
PYWA++ AD++ +LK++ITI+ P VF PMHHL F ELVGG R
Sbjct: 45 PYWASLHADVEAHLKQTITIKEPLLVFEPMHHLIFTAPKTTVPALCLAACELVGGQR 101
>gb|AFK47692.1| unknown [Medicago truncatula]
Length = 297
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +1
Query: 49 PYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
PYWA++ ADI+ +LK++ITI+ P VF PMHHL F E VGG R
Sbjct: 45 PYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCEFVGGQR 101
>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
Length = 299
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/54 (51%), Positives = 32/54 (59%)
Frame = +1
Query: 55 WAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGD 216
WA IE+DI +LKKSI IR PE VF PMH+LTF E+VGGD
Sbjct: 44 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGD 97
>ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theobroma cacao]
gi|508720424|gb|EOY12321.1| Geranyl-diphosphate
synthase, putative [Theobroma cacao]
Length = 300
Score = 55.5 bits (132), Expect = 8e-06
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1
Query: 43 SQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFXXXXXXXXXXXXXXXELVGGDR 219
+Q YWA+I ADI+ +LK++I +R P +V PMHHLTF ELVGG R
Sbjct: 35 NQSYWASINADIEAHLKQAIPVREPLSVSQPMHHLTFACPKNTAPALCVAACELVGGHR 93