BLASTX nr result

ID: Mentha27_contig00045081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00045081
         (411 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007026828.1| DNA double-strand break repair rad50 ATPase,...    62   1e-07
ref|XP_007026827.1| DNA double-strand break repair rad50 ATPase,...    62   1e-07
ref|XP_006363089.1| PREDICTED: uncharacterized serine-rich prote...    56   6e-06

>ref|XP_007026828.1| DNA double-strand break repair rad50 ATPase, putative isoform 2
           [Theobroma cacao] gi|508715433|gb|EOY07330.1| DNA
           double-strand break repair rad50 ATPase, putative
           isoform 2 [Theobroma cacao]
          Length = 515

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = -1

Query: 402 SGNVEMGTTQITSEFSSTM------KDMNFAGTDSVASMRSITKCITIVSPVKNQRRNFA 241
           SG+  +G  Q+ SEFSST+      KDMN  G DSV S++SITKC+ I+SP K +R +  
Sbjct: 448 SGDGNLGAPQVMSEFSSTVTKVFSEKDMNAQGPDSVTSVKSITKCVKILSPAKGRRSSSE 507

Query: 240 QNNLSDR 220
           Q N S +
Sbjct: 508 QQNCSSK 514


>ref|XP_007026827.1| DNA double-strand break repair rad50 ATPase, putative isoform 1
           [Theobroma cacao] gi|508715432|gb|EOY07329.1| DNA
           double-strand break repair rad50 ATPase, putative
           isoform 1 [Theobroma cacao]
          Length = 515

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = -1

Query: 402 SGNVEMGTTQITSEFSSTM------KDMNFAGTDSVASMRSITKCITIVSPVKNQRRNFA 241
           SG+  +G  Q+ SEFSST+      KDMN  G DSV S++SITKC+ I+SP K +R +  
Sbjct: 448 SGDGNLGAPQVMSEFSSTVTKVFSEKDMNAQGPDSVTSVKSITKCVKILSPAKGRRSSSE 507

Query: 240 QNNLSDR 220
           Q N S +
Sbjct: 508 QQNCSSK 514


>ref|XP_006363089.1| PREDICTED: uncharacterized serine-rich protein C215.13-like
           [Solanum tuberosum]
          Length = 512

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = -1

Query: 411 PLTSGNVEMGTTQITSEFSSTMKD------MNFAGTDSVASMRSITKCITIVSPVKNQR 253
           P  SGNV+    QITS  SST+ +      MN  G+DS+ + +S+TKCI IVSPVKN R
Sbjct: 450 PDESGNVDTDANQITSHISSTVTEVFSEQGMNLLGSDSLTTTKSVTKCIQIVSPVKNIR 508


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