BLASTX nr result
ID: Mentha27_contig00043702
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00043702
(576 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea] 276 3e-72
ref|XP_002510888.1| pentatricopeptide repeat-containing protein,... 274 1e-71
ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citr... 263 2e-68
ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containi... 256 2e-66
ref|XP_007038498.1| Tetratricopeptide repeat-like superfamily pr... 255 5e-66
gb|EYU19500.1| hypothetical protein MIMGU_mgv1a019249mg, partial... 253 3e-65
ref|XP_007152720.1| hypothetical protein PHAVU_004G153700g [Phas... 252 4e-65
ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containi... 252 6e-65
ref|XP_007038499.1| Tetratricopeptide repeat-like superfamily pr... 249 5e-64
ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containi... 248 8e-64
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t... 248 1e-63
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi... 246 4e-63
gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis] 244 1e-62
ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containi... 237 2e-60
ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Caps... 185 8e-45
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar... 183 3e-44
ref|XP_007050939.1| Pentatricopeptide repeat (PPR) superfamily p... 180 2e-43
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ... 180 2e-43
gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum] 179 6e-43
ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutr... 178 8e-43
>gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea]
Length = 498
Score = 276 bits (706), Expect = 3e-72
Identities = 137/195 (70%), Positives = 165/195 (84%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEMS+RD VSWNS+I G LR+G DSAL LF +M +RKNIITWNSVITGLVQ GRAKEA
Sbjct: 171 FDEMSNRDVVSWNSIIAGYLRSGNLDSALGLFRRMNQRKNIITWNSVITGLVQCGRAKEA 230
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L FHEMQ S +E NAV+PDK+TVASAISACA ID GKW+HSYL+R G+E D+V+GT
Sbjct: 231 LGFFHEMQVSENENNAVKPDKVTVASAISACASLGAIDQGKWMHSYLKRRGMECDLVMGT 290
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG+V+KAF+VF+GM+ KDVL+WTAMIS AL+G G++AF++FE+ME G+KP
Sbjct: 291 ALVDMYGKCGFVEKAFQVFDGMKNKDVLSWTAMISAFALHGNGSKAFELFEQMEMAGVKP 350
Query: 530 NAVTFVGLLSASAHS 574
NAVT+V LSA +HS
Sbjct: 351 NAVTYVSALSACSHS 365
>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 274 bits (700), Expect = 1e-71
Identities = 138/198 (69%), Positives = 158/198 (79%), Gaps = 7/198 (3%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEMS+RD VSWNSMI+G LR+G D +L LF +MK +N+ITWNS+ITG VQGGR KEA
Sbjct: 166 FDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGGRPKEA 225
Query: 182 LDIFHEMQNSGDE---KNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMV 340
L+ FHEMQ D+ N VRPDKIT+AS +SACA IDHGKWVHSYL RSG+E DMV
Sbjct: 226 LEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMV 285
Query: 341 IGTALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVG 520
IGTALVDMYGKCG +++A+EVF M KD LAWTAMISV ALNG+G EAF +F EMEA G
Sbjct: 286 IGTALVDMYGKCGCLQRAYEVFREMSEKDTLAWTAMISVFALNGFGKEAFDMFNEMEAGG 345
Query: 521 MKPNAVTFVGLLSASAHS 574
+KPN VTFVGLLSA AHS
Sbjct: 346 VKPNLVTFVGLLSACAHS 363
>ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citrus clementina]
gi|568874334|ref|XP_006490271.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557523655|gb|ESR35022.1| hypothetical protein
CICLE_v10004643mg [Citrus clementina]
Length = 569
Score = 263 bits (672), Expect = 2e-68
Identities = 134/195 (68%), Positives = 158/195 (81%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEMS+RD VSWN+MI+G LR+G D AL+LF +MKKR NI +WNS+ITG VQGGRA+EA
Sbjct: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR-NIFSWNSIITGFVQGGRAREA 253
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L++F EMQ+S E+ V+PDKIT+AS +SACA IDHGKWVH YL RSG++ D+VIGT
Sbjct: 254 LELFQEMQSSSVEE-MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG V++A+ VF M KD LAWTAMISV ALNGYG EAF F EMEA G++P
Sbjct: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA AHS
Sbjct: 373 NHVTFVGLLSACAHS 387
>ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Fragaria vesca subsp. vesca]
Length = 511
Score = 256 bits (655), Expect = 2e-66
Identities = 130/195 (66%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDE++ RD VSWNSMI G LR+G D A+E+F +MKKR ++ +WNS+ITG VQGGRA+EA
Sbjct: 174 FDEITERDVVSWNSMIKGYLRSGDLDEAIEVFREMKKR-SVFSWNSIITGCVQGGRAREA 232
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
LD FHEMQ VRPDKIT+AS ++ACA +D+G WVH YL RSG+ESD+VIGT
Sbjct: 233 LDFFHEMQ----VVEGVRPDKITIASVLAACAHLGEVDNGTWVHGYLRRSGVESDVVIGT 288
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG V+KA+EVF M KD LAWTAMISV AL+G+GNEAF +FE+MEA G++P
Sbjct: 289 ALVDMYGKCGCVEKAYEVFMEMPKKDTLAWTAMISVFALHGFGNEAFDLFEKMEAAGVEP 348
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA AHS
Sbjct: 349 NHVTFVGLLSACAHS 363
Score = 57.8 bits (138), Expect = 2e-06
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 36/167 (21%)
Frame = +2
Query: 179 ALDIFHEMQNSGDEKNAVRPDKITVASAISACA--ID--HGKWVHSYLERSGIESDMVIG 346
+L+++ +M G +RPD +T + CA ID +G+ VH + + G D+ +
Sbjct: 100 SLELYKQMVGDG-----IRPDCLTFPFLVKECAARIDGGNGRSVHGQVVKYGFRKDLFVQ 154
Query: 347 TALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMI----------------------SVL 460
+L++MY G + A +VF+ + +DV++W +MI SV
Sbjct: 155 NSLMNMYSVFGSLICARKVFDEITERDVVSWNSMIKGYLRSGDLDEAIEVFREMKKRSVF 214
Query: 461 ALN---------GYGNEAFKVFEEMEAV-GMKPNAVTFVGLLSASAH 571
+ N G EA F EM+ V G++P+ +T +L+A AH
Sbjct: 215 SWNSIITGCVQGGRAREALDFFHEMQVVEGVRPDKITIASVLAACAH 261
>ref|XP_007038498.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508775743|gb|EOY22999.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 467
Score = 255 bits (652), Expect = 5e-66
Identities = 129/195 (66%), Positives = 152/195 (77%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEM +RD VSWNSMI+G LR G D AL+LF ++KR NIITWNS+ITG VQGG KEA
Sbjct: 95 FDEMLNRDVVSWNSMIIGHLRAGNLDMALKLFRSIEKR-NIITWNSMITGFVQGGLGKEA 153
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQN ++ V+PDKIT+AS +SACA IDHGKW+HSYL RSG+E D+V+GT
Sbjct: 154 LQLFHEMQNLSNDN--VKPDKITMASVLSACAYLGAIDHGKWIHSYLRRSGVECDLVVGT 211
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
AL+DMYGKCG V++A+EVF M +D LAWTAMIS AL+GY EAF F EMEAVG+KP
Sbjct: 212 ALIDMYGKCGSVERAYEVFKEMPRRDTLAWTAMISAFALHGYSKEAFDTFVEMEAVGVKP 271
Query: 530 NAVTFVGLLSASAHS 574
N VTFV LLSA HS
Sbjct: 272 NHVTFVSLLSACVHS 286
>gb|EYU19500.1| hypothetical protein MIMGU_mgv1a019249mg, partial [Mimulus
guttatus]
Length = 474
Score = 253 bits (646), Expect = 3e-65
Identities = 130/179 (72%), Positives = 148/179 (82%), Gaps = 5/179 (2%)
Frame = +2
Query: 53 GSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEALDIFHEMQNSGDEK-NA 229
G LR G D+AL LF + RKNIITWNSVITGLVQGGRAK+ALDIFHEMQ+ GDEK +
Sbjct: 115 GCLRGGELDTALGLFRALNARKNIITWNSVITGLVQGGRAKDALDIFHEMQSLGDEKGDT 174
Query: 230 VRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGTALVDMYGKCGYVKKAF 397
V PD++T+ASA+SACA +D GKWVHSYLERSG+E DMVIGTALVDMYGKCG + A
Sbjct: 175 VGPDQVTLASALSACASLGAVDQGKWVHSYLERSGLECDMVIGTALVDMYGKCGCIGTAL 234
Query: 398 EVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKPNAVTFVGLLSASAHS 574
EVF GM KDVLAWTAMISVLAL+GYG++AF+VF EME ++PNAVTFVGLLSA AHS
Sbjct: 235 EVFYGMPVKDVLAWTAMISVLALHGYGDKAFEVFTEMEEAKVRPNAVTFVGLLSACAHS 293
Score = 58.9 bits (141), Expect = 9e-07
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Frame = +2
Query: 77 DSALELFMQMKK---RKNIITWNSVITG---LVQGGRAKEALDIFHEMQNSGDEKNAVRP 238
D + EL+ + K ++ +N++I ++ ++E+L ++ EM SG + P
Sbjct: 2 DESQELYFTIFKFITHPSVFVYNAMIRANATKIKDPNSRESLFLYKEMLRSG-----LVP 56
Query: 239 DKITVASAISACAIDH----GKWVHSYLERSGIESDMVIGTALVDMYGKCGYVKKAFE-- 400
D IT+ + C+ G+ +H++ G E D+ + AL+ +Y +CG ++ A +
Sbjct: 57 DCITLPFVLKECSNRFDGLMGRAIHAHAVGFGYEVDVYVQNALICLYSECGVLEDAMKGC 116
Query: 401 -----------VFNGMRF-KDVLAWTAMISVLALNGYGNEAFKVFEEMEAVG------MK 526
+F + K+++ W ++I+ L G +A +F EM+++G +
Sbjct: 117 LRGGELDTALGLFRALNARKNIITWNSVITGLVQGGRAKDALDIFHEMQSLGDEKGDTVG 176
Query: 527 PNAVTFVGLLSASA 568
P+ VT LSA A
Sbjct: 177 PDQVTLASALSACA 190
>ref|XP_007152720.1| hypothetical protein PHAVU_004G153700g [Phaseolus vulgaris]
gi|561026029|gb|ESW24714.1| hypothetical protein
PHAVU_004G153700g [Phaseolus vulgaris]
Length = 542
Score = 252 bits (644), Expect = 4e-65
Identities = 129/195 (66%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDE+ D V+WNSM++G LRNG D A++LF +MK+R NIITWNS+ITGL QGGRAKE+
Sbjct: 186 FDELLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMKER-NIITWNSIITGLAQGGRAKES 244
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISAC----AIDHGKWVHSYLERSGIESDMVIGT 349
L++FHEMQ GD+ V+PDKIT+AS +SAC AIDHGKWVH YL+R+GIE D+VIGT
Sbjct: 245 LELFHEMQLLGDDM--VKPDKITIASVLSACSQLGAIDHGKWVHGYLKRNGIECDVVIGT 302
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALV+M+GKCG VKKAFE+F M KD AWT MISV AL+G G +AF F EME G+KP
Sbjct: 303 ALVNMFGKCGDVKKAFEIFKEMPEKDTSAWTVMISVFALHGLGWKAFDCFLEMERAGVKP 362
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA AHS
Sbjct: 363 NHVTFVGLLSACAHS 377
>ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 551
Score = 252 bits (643), Expect = 6e-65
Identities = 127/195 (65%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEMS+RD VSWNS+I+G LRN + ALELF +MK R NI+TWNS+ITG VQGGR KEA
Sbjct: 186 FDEMSNRDVVSWNSIIIGCLRNSELNMALELFRRMKYR-NIVTWNSIITGFVQGGRPKEA 244
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L+ F EMQ SGD+ V PDK+T+AS +SACA +DHG+WVH YL RSG+E DMVI T
Sbjct: 245 LEFFFEMQVSGDDM--VSPDKMTIASVLSACASLGAVDHGRWVHDYLNRSGMECDMVIAT 302
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG V KA +VF M+ KDVLAWTAM+S A+NG G EA ++F +ME G++P
Sbjct: 303 ALVDMYGKCGSVSKALDVFRSMKNKDVLAWTAMLSAFAINGNGREALELFLDMETAGVRP 362
Query: 530 NAVTFVGLLSASAHS 574
NAVTF LLSA AHS
Sbjct: 363 NAVTFTALLSACAHS 377
>ref|XP_007038499.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao] gi|590672049|ref|XP_007038500.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao] gi|508775744|gb|EOY23000.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao] gi|508775745|gb|EOY23001.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 370
Score = 249 bits (635), Expect = 5e-64
Identities = 126/192 (65%), Positives = 149/192 (77%), Gaps = 4/192 (2%)
Frame = +2
Query: 11 MSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEALDI 190
M +RD VSWNSMI+G LR G D AL+LF ++KR NIITWNS+ITG VQGG KEAL +
Sbjct: 1 MLNRDVVSWNSMIIGHLRAGNLDMALKLFRSIEKR-NIITWNSMITGFVQGGLGKEALQL 59
Query: 191 FHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGTALV 358
FHEMQN ++ V+PDKIT+AS +SACA IDHGKW+HSYL RSG+E D+V+GTAL+
Sbjct: 60 FHEMQNLSNDN--VKPDKITMASVLSACAYLGAIDHGKWIHSYLRRSGVECDLVVGTALI 117
Query: 359 DMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKPNAV 538
DMYGKCG V++A+EVF M +D LAWTAMIS AL+GY EAF F EMEAVG+KPN V
Sbjct: 118 DMYGKCGSVERAYEVFKEMPRRDTLAWTAMISAFALHGYSKEAFDTFVEMEAVGVKPNHV 177
Query: 539 TFVGLLSASAHS 574
TFV LLSA HS
Sbjct: 178 TFVSLLSACVHS 189
>ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 539
Score = 248 bits (633), Expect = 8e-64
Identities = 124/195 (63%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEMS+RD VSWN+M++G LRN D ALELF ++KKR NI+TWNS+ITG VQGGR KEA
Sbjct: 174 FDEMSNRDVVSWNAMVIGCLRNSELDMALELFRRVKKR-NIVTWNSIITGFVQGGRPKEA 232
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L+ F+EMQ SGD+ V PDK+T+AS +SACA +D G+WVH YL SG+E DMVI T
Sbjct: 233 LEFFYEMQVSGDDM--VSPDKLTIASVLSACASLGAVDQGRWVHDYLNTSGMECDMVIAT 290
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG V KA +VF M+ KDVLAWTAM+S A+NG G EAF++F +ME ++P
Sbjct: 291 ALVDMYGKCGSVSKALDVFRSMKNKDVLAWTAMLSAFAINGNGREAFELFLDMETARVRP 350
Query: 530 NAVTFVGLLSASAHS 574
N VTF LLSA AHS
Sbjct: 351 NDVTFTALLSACAHS 365
Score = 59.3 bits (142), Expect = 7e-07
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +2
Query: 80 SALELFMQMKKRKNIITWNSVI---TGLVQGGRAKEALDIFHEMQNSGDEKNAVRPDKIT 250
S + ++ +K + +NS+I + + + L ++ +M G + PD IT
Sbjct: 64 SYADTVFRLVPQKTLFIYNSMIRAHASRIHDPSSSQPLILYRQMLFDG-----ITPDCIT 118
Query: 251 VASAISACA--IDH--GKWVHSYLERSGIESDMVIGTALVDMYGKCGYVKKAFEVFNGMR 418
+ C +D G VH+++ + G SD+ + +L+ +Y +CG V+ A +VF+ M
Sbjct: 119 FPFVLKHCVSRVDGLVGSSVHAHVVKFGFHSDVFVQNSLITLYSQCGSVENARKVFDEMS 178
Query: 419 FKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKPNAVTFVGLLS 559
+DV++W AM+ N + A ++F ++ K N VT+ +++
Sbjct: 179 NRDVVSWNAMVIGCLRNSELDMALELFRRVK----KRNIVTWNSIIT 221
>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 541
Score = 248 bits (632), Expect = 1e-63
Identities = 130/196 (66%), Positives = 153/196 (78%), Gaps = 5/196 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEM RD VSWNSM+VG LRNG + AL LF +M R NIITWNS+ITGLVQ G AKE+
Sbjct: 187 FDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGR-NIITWNSIITGLVQAGHAKES 245
Query: 182 LDIFHEMQN-SGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIG 346
L+IFHEMQ SGD+ V+PDKIT+AS +SACA IDHGKWVH+YL ++ IE D+VIG
Sbjct: 246 LEIFHEMQFLSGDD--VVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIG 303
Query: 347 TALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMK 526
TALV+MYGKCG V++A E+FN M KD AWTAMISV AL+G+G +AF F EME G+K
Sbjct: 304 TALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVK 363
Query: 527 PNAVTFVGLLSASAHS 574
PN VTFVGLLSA +HS
Sbjct: 364 PNHVTFVGLLSACSHS 379
>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 246 bits (627), Expect = 4e-63
Identities = 127/195 (65%), Positives = 149/195 (76%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEM D V+WNSM++G LRNG D A++LF +M R NIITWNS+ITGL QGG AKE+
Sbjct: 184 FDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGR-NIITWNSIITGLAQGGSAKES 242
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L++FHEMQ D+ V+PDKIT+AS +SACA IDHGKWVH YL R+GIE D+VIGT
Sbjct: 243 LELFHEMQILSDDM--VKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGT 300
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALV+MYGKCG V+KAFE+F M KD AWT MISV AL+G G +AF F EME G+KP
Sbjct: 301 ALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKP 360
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA AHS
Sbjct: 361 NHVTFVGLLSACAHS 375
>gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis]
Length = 540
Score = 244 bits (623), Expect = 1e-62
Identities = 126/195 (64%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEM++RD VSWNSMI+G LRNG D AL LF +M+ KNI+TWNS+ITG VQGGR K+A
Sbjct: 181 FDEMANRDVVSWNSMIIGYLRNGDLDDALNLFRKMRN-KNIVTWNSIITGFVQGGRPKDA 239
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L+ FHEMQ + + RPDKIT+AS +SACA I+HGKWVH YL RSG+ D+V GT
Sbjct: 240 LEFFHEMQAASSDV-MFRPDKITIASVLSACAQLGAINHGKWVHDYLRRSGLVCDVVTGT 298
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALVDMYGKCG V++A VF M KD LA+TAMISVLAL+G+ EAF V+ EME GMKP
Sbjct: 299 ALVDMYGKCGSVERASNVFKEMPEKDTLAYTAMISVLALHGFSKEAFDVYGEMEMNGMKP 358
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA +H+
Sbjct: 359 NHVTFVGLLSACSHA 373
>ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 541
Score = 237 bits (604), Expect = 2e-60
Identities = 125/195 (64%), Positives = 149/195 (76%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDEM RD V+WN MIVG LR G + AL LF +M +R NIITWNS+ITGLVQ G AKE+
Sbjct: 185 FDEMFVRDVVTWNIMIVGCLRIGEIELALNLFRKMNRR-NIITWNSIITGLVQAGYAKES 243
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L+IFHEMQ D V+PDKIT+AS +SACA IDHG+W+H+YL ++ IE D+VIGT
Sbjct: 244 LEIFHEMQFLSDY--FVKPDKITIASVLSACAQLGSIDHGRWMHAYLRKNSIECDVVIGT 301
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
ALV+MYGKCG V++AFE+FN M KDV AWT MISV AL+G G +AF F +ME G+KP
Sbjct: 302 ALVNMYGKCGNVQQAFEIFNDMPEKDVSAWTTMISVFALHGLGWKAFDCFLDMERAGVKP 361
Query: 530 NAVTFVGLLSASAHS 574
N VTFVGLLSA AHS
Sbjct: 362 NHVTFVGLLSACAHS 376
>ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Capsella rubella]
gi|482550350|gb|EOA14544.1| hypothetical protein
CARUB_v10027776mg [Capsella rubella]
Length = 621
Score = 185 bits (469), Expect = 8e-45
Identities = 92/195 (47%), Positives = 130/195 (66%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FD MS D VSWNS+I G ++ G D AL LF +M + KN I+W ++I+G V+ G EA
Sbjct: 174 FDRMSKPDAVSWNSVIKGYVKAGKMDIALTLFQKMAE-KNAISWTTMISGYVEAGMNNEA 232
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQNS V PD +++A+A+SACA ++ GKW+HSYL + I D V+G
Sbjct: 233 LQLFHEMQNSD-----VEPDNVSLANALSACAQLGALEQGKWIHSYLNKERIRIDSVLGC 287
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
L+DMY KCG +++A VFN ++ K V AWTA+IS A +G+G EA F EM+ +G+KP
Sbjct: 288 VLIDMYAKCGEMEEALGVFNNIKIKSVQAWTALISGYAYHGHGREAISKFMEMQKMGVKP 347
Query: 530 NAVTFVGLLSASAHS 574
N +TF +L+A ++
Sbjct: 348 NVITFTAVLTACGYT 362
>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 183 bits (464), Expect = 3e-44
Identities = 91/195 (46%), Positives = 132/195 (67%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FD + D+VSWNS+I G ++ G D AL LF +M + KN I+W ++I+G VQ KEA
Sbjct: 173 FDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE-KNAISWTTMISGYVQADMNKEA 231
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQNS V PD +++A+A+SACA ++ GKW+HSYL ++ I D V+G
Sbjct: 232 LQLFHEMQNSD-----VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
L+DMY KCG +++A EVF ++ K V AWTA+IS A +G+G EA F EM+ +G+KP
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 530 NAVTFVGLLSASAHS 574
N +TF +L+A +++
Sbjct: 347 NVITFTAVLTACSYT 361
>ref|XP_007050939.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|590718992|ref|XP_007050940.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508703200|gb|EOX95096.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508703201|gb|EOX95097.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 525
Score = 180 bits (457), Expect = 2e-43
Identities = 92/195 (47%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FDE++ D SWNS+I ++ G+ D A LF +M +R N+ +W+S+I G V+ G+ KEA
Sbjct: 119 FDEITQPDVASWNSIIHAYVKVGLIDLARGLFDKMPER-NVRSWSSLINGFVRCGKYKEA 177
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISAC----AIDHGKWVHSYLERSGIESDMVIGT 349
L +F EMQ N VRP++ T+++ +SAC A++HGKW H+Y+++ GI+ D+V+GT
Sbjct: 178 LALFREMQMLA--VNDVRPNEFTMSAVLSACGRLGALEHGKWAHAYIDKCGIKIDVVLGT 235
Query: 350 ALVDMYGKCGYVKKAFEVFNGM-RFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMK 526
+L+DMYGKCG ++KA +VF+ + KDV+AW+AMIS LA++G+G+E K+F EM ++
Sbjct: 236 SLIDMYGKCGSIEKARDVFSNLGPDKDVMAWSAMISGLAMHGHGDECLKLFSEMIKRQVR 295
Query: 527 PNAVTFVGLLSASAH 571
PNAVTF+G+L A H
Sbjct: 296 PNAVTFLGVLCACVH 310
Score = 65.5 bits (158), Expect = 1e-08
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Frame = +2
Query: 23 DEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEALDIFHEM 202
D V S+I + G + A ++F + K+++ W+++I+GL G E L +F EM
Sbjct: 230 DVVLGTSLIDMYGKCGSIEKARDVFSNLGPDKDVMAWSAMISGLAMHGHGDECLKLFSEM 289
Query: 203 QNSGDEKNAVRPDKITVASAISACAIDHGKWVHS---YLERSGIESDMVIGT----ALVD 361
K VRP+ +T + AC HG V+ Y R E ++ A+VD
Sbjct: 290 I-----KRQVRPNAVTFLGVLCACV--HGGLVNDGKEYFRRMSKEFGIIPSIQHFGAMVD 342
Query: 362 MYGKCGYVKKAFEVFNGMRFK-DVLAWTAMIS 454
+YG+ G + +A+ V M + DVL W +++S
Sbjct: 343 LYGRAGLIDEAWNVVKSMPMEPDVLVWGSLLS 374
>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312591|gb|EFH43015.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 649
Score = 180 bits (457), Expect = 2e-43
Identities = 92/195 (47%), Positives = 130/195 (66%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FD + D VSWNS+I G + G D AL LF +M + KN I+W ++I+G VQ G KEA
Sbjct: 202 FDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVE-KNAISWTTMISGYVQAGMHKEA 260
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQNS V PD +++A+A+SACA ++ GKW+HSYL ++ I D V+G
Sbjct: 261 LQLFHEMQNSD-----VEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGC 315
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
L+DMY KCG + +A EVF ++ K V AWTA+IS A +G+G EA F EM+ +G+KP
Sbjct: 316 VLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 375
Query: 530 NAVTFVGLLSASAHS 574
N +TF +L+A +++
Sbjct: 376 NVITFTTVLTACSYT 390
>gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 179 bits (453), Expect = 6e-43
Identities = 89/195 (45%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FD + D VSWNS+I G ++ G D AL LF +M ++ N I+W ++I+G VQ G KEA
Sbjct: 168 FDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEA 227
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISAC----AIDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQNS V PD +++ASA+SAC A++ GKW+HSY ++ D V+
Sbjct: 228 LQLFHEMQNSN-----VPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCC 282
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
L+DMY KCG +++A VF M+ K V WTA+IS A +G G EA F EM+ +G+KP
Sbjct: 283 VLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKP 342
Query: 530 NAVTFVGLLSASAHS 574
NA+TF +L+A +++
Sbjct: 343 NAITFTAVLTACSYT 357
>ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutrema salsugineum]
gi|557090486|gb|ESQ31133.1| hypothetical protein
EUTSA_v10005524mg [Eutrema salsugineum]
Length = 616
Score = 178 bits (452), Expect = 8e-43
Identities = 88/195 (45%), Positives = 128/195 (65%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 FDEMSSRDEVSWNSMIVGSLRNGMTDSALELFMQMKKRKNIITWNSVITGLVQGGRAKEA 181
FD + D VSWNS+I G ++G D AL LF +M ++KN I+W ++I+G VQ G KEA
Sbjct: 168 FDRIKEPDVVSWNSLIKGYAKSGNMDIALTLFRRMPEKKNAISWTTMISGYVQAGMNKEA 227
Query: 182 LDIFHEMQNSGDEKNAVRPDKITVASAISACA----IDHGKWVHSYLERSGIESDMVIGT 349
L +FHEMQNS V PD +++A+A+SACA + GKW+HSY+ + I D V+
Sbjct: 228 LQLFHEMQNSD-----VEPDNVSLANALSACAQLGALQQGKWIHSYVNQRRIIIDSVLAC 282
Query: 350 ALVDMYGKCGYVKKAFEVFNGMRFKDVLAWTAMISVLALNGYGNEAFKVFEEMEAVGMKP 529
L+DMY KCG +++A VF + K V WTA+IS A +G+G EA F +M+ +G+KP
Sbjct: 283 VLIDMYAKCGEMEEALAVFKNVNRKPVQVWTALISGYAYHGHGREAISKFLDMQRMGIKP 342
Query: 530 NAVTFVGLLSASAHS 574
NA+TF +L+A +++
Sbjct: 343 NAITFTAVLTACSYT 357