BLASTX nr result
ID: Mentha27_contig00043340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00043340
(444 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group] 95 9e-18
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 3e-17
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 3e-17
gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 3e-17
gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 3e-17
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group... 94 3e-17
gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japoni... 94 3e-17
emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group] 93 3e-17
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera] 93 3e-17
gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subc... 93 4e-17
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 92 6e-17
gb|ABA93898.1| retrotransposon protein, putative, Ty3-gypsy subc... 92 6e-17
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 92 6e-17
gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc... 92 6e-17
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 92 6e-17
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group] 92 6e-17
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 92 6e-17
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 92 6e-17
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 92 7e-17
gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-... 92 7e-17
>emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
Length = 1402
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +IQS
Sbjct: 650 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIQS 709
Query: 16 FLVLA 2
FL LA
Sbjct: 710 FLGLA 714
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 564 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTKWKAPKSVTEIRS 623
Query: 16 FLVLA 2
FL LA
Sbjct: 624 FLGLA 628
>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDP KVEAV+ WK P + +IQS
Sbjct: 411 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPTKVEAVTEWKAPKSVTEIQS 470
Query: 16 FLVLA 2
FL LA
Sbjct: 471 FLGLA 475
>gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1620
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 922 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 981
Query: 16 FLVLA 2
FL LA
Sbjct: 982 FLGLA 986
>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711716|gb|ABF99511.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1312
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 630 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 689
Query: 16 FLVLA 2
FL LA
Sbjct: 690 FLGLA 694
>gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 823
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 166 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 225
Query: 16 FLVLA 2
FL LA
Sbjct: 226 FLGLA 230
>emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
Length = 1606
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 648 VLEKLRKHKLYAKFSKCEFWLKELAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 707
Query: 16 FLVLA 2
FL LA
Sbjct: 708 FLGLA 712
>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
Length = 596
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = -3
Query: 202 SDVLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADI 23
S VL+ LR ++LYAK KKCEFWL RI FLGHVV +DG +VDP KV+AV+NW+ P+T +I
Sbjct: 38 SIVLQTLRDKQLYAKLKKCEFWLDRISFLGHVVSNDGISVDPGKVDAVANWRRPSTVTEI 97
Query: 22 QSFLVLA 2
+SFL LA
Sbjct: 98 RSFLGLA 104
>gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 522
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 52 VLEKLRKHKLYAKFSKCEFWLKEVTFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 111
Query: 16 FLVLA 2
FL LA
Sbjct: 112 FLGLA 116
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>gb|ABA93898.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 879
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHVV + G AVDPAK+EAV+ WK P +I+S
Sbjct: 588 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKIEAVTEWKAPKFVTEIRS 647
Query: 16 FLVLA 2
FL LA
Sbjct: 648 FLGLA 652
>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 1078 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 1137
Query: 16 FLVLA 2
FL LA
Sbjct: 1138 FLGLA 1142
>gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
Length = 1470
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ L+++KLYAKF KCEFWL ++ FLGHV+ DG VDPAK+EAVS W PTT +I+S
Sbjct: 386 VLQTLKEKKLYAKFSKCEFWLKQVSFLGHVISGDGIQVDPAKIEAVSKWPRPTTVTEIRS 445
Query: 16 FLVLA 2
FL LA
Sbjct: 446 FLGLA 450
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VL+ LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550206|gb|ABA93003.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G VDPAKVEAV+ WK P + +I+S
Sbjct: 715 VLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVVVDPAKVEAVTEWKAPKSVTEIRS 774
Query: 16 FLVLA 2
FL LA
Sbjct: 775 FLGLA 779
>gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550032|gb|ABA92829.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 669
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = -3
Query: 196 VLEVLRKEKLYAKFKKCEFWLSRIGFLGHVVISDGTAVDPAKVEAVSNWKVPTTAADIQS 17
VLE LRK KLYAKF KCEFWL + FLGHV+ + G AVDPAKVEA++ WK P + I+S
Sbjct: 235 VLEKLRKHKLYAKFSKCEFWLEEVAFLGHVISAGGVAVDPAKVEAITEWKAPKSVTKIRS 294
Query: 16 FLVLA 2
FL LA
Sbjct: 295 FLGLA 299