BLASTX nr result

ID: Mentha27_contig00042486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00042486
         (452 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDK13061.1| putative predicted protein [Malus domestica]           57   2e-06
ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like isofo...    57   3e-06
ref|XP_006487710.1| PREDICTED: RNA-binding protein 42-like [Citr...    55   8e-06
ref|XP_006442672.1| hypothetical protein CICLE_v10021882mg [Citr...    55   8e-06
ref|XP_007205778.1| hypothetical protein PRUPE_ppa010477mg [Prun...    55   8e-06
gb|EXB93170.1| RNA-binding protein 42 [Morus notabilis]                55   1e-05

>emb|CDK13061.1| putative predicted protein [Malus domestica]
          Length = 389

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +1

Query: 358 LYIKVVRDKRTGKTKGYGFISFANPSDLVGA 450
           ++ KVVRDKRTGKTKG+GF+SFANPSDL GA
Sbjct: 239 IHSKVVRDKRTGKTKGFGFVSFANPSDLAGA 269


>ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like isoform X1 [Glycine max]
           gi|571483337|ref|XP_006589208.1| PREDICTED: RNA-binding
           protein 42-like isoform X2 [Glycine max]
          Length = 248

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 367 KVVRDKRTGKTKGYGFISFANPSDLVGA 450
           +VVRDKRTGKTKGYGF+SFANPSDL GA
Sbjct: 170 RVVRDKRTGKTKGYGFVSFANPSDLAGA 197


>ref|XP_006487710.1| PREDICTED: RNA-binding protein 42-like [Citrus sinensis]
          Length = 274

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 367 KVVRDKRTGKTKGYGFISFANPSDLVGA 450
           KVVRDKRTGKTKGYGFISFANPSD+  A
Sbjct: 196 KVVRDKRTGKTKGYGFISFANPSDIAAA 223


>ref|XP_006442672.1| hypothetical protein CICLE_v10021882mg [Citrus clementina]
           gi|557544934|gb|ESR55912.1| hypothetical protein
           CICLE_v10021882mg [Citrus clementina]
          Length = 247

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 367 KVVRDKRTGKTKGYGFISFANPSDLVGA 450
           KVVRDKRTGKTKGYGFISFANPSD+  A
Sbjct: 169 KVVRDKRTGKTKGYGFISFANPSDIAAA 196


>ref|XP_007205778.1| hypothetical protein PRUPE_ppa010477mg [Prunus persica]
           gi|462401420|gb|EMJ06977.1| hypothetical protein
           PRUPE_ppa010477mg [Prunus persica]
          Length = 248

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = +1

Query: 367 KVVRDKRTGKTKGYGFISFANPSDLVGA 450
           +VVRDKRTGKTKG+GF+SFANPSDL GA
Sbjct: 170 RVVRDKRTGKTKGFGFVSFANPSDLAGA 197


>gb|EXB93170.1| RNA-binding protein 42 [Morus notabilis]
          Length = 95

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +1

Query: 358 LYIKVVRDKRTGKTKGYGFISFANPSDLVGA 450
           L + VVRDKRTGKTKGYGF+SFANPSDL  A
Sbjct: 14  LNVLVVRDKRTGKTKGYGFVSFANPSDLAAA 44


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