BLASTX nr result
ID: Mentha27_contig00041479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00041479
(485 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 209 3e-52
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 194 1e-47
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 173 2e-41
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus... 170 2e-40
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 167 1e-39
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 167 1e-39
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 167 1e-39
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 167 2e-39
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 166 4e-39
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 166 4e-39
ref|XP_002298071.2| hypothetical protein POPTR_0001s08650g [Popu... 161 1e-37
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 149 3e-34
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 149 4e-34
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 149 5e-34
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 149 5e-34
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 148 7e-34
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 148 7e-34
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 145 6e-33
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 144 1e-32
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 144 1e-32
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 209 bits (532), Expect = 3e-52
Identities = 106/160 (66%), Positives = 130/160 (81%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLFQCLLRHC ++ L +L+ QE+LCEWL+RRGL+VSLSDL LS D +S KNLLDDI+CG
Sbjct: 265 NLFQCLLRHCPEKTLDILHAAQEVLCEWLSRRGLSVSLSDLCLSSDPQSRKNLLDDIACG 324
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
L+EAE++SD SLLMVG NQ FL++ SEE + M KE + +A+QT AEL QASL A+K+
Sbjct: 325 LEEAEKMSDISLLMVGHNQRFLIENSEEDEDMLK-SKEHLYVAQQTSAELCQASLFASKS 383
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRDMQ L Y YAG+ N+ +AM+KAGSKGNLQKL QHSMC
Sbjct: 384 VFRDMQNLIYHYAGDTNSLLAMLKAGSKGNLQKLFQHSMC 423
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 194 bits (493), Expect = 1e-47
Identities = 97/160 (60%), Positives = 124/160 (77%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NL+ CL+RHCGDRALG LN QE+LCEWL+R+GL+VSLSDLY+S D S KNLL+++ G
Sbjct: 551 NLYLCLVRHCGDRALGFLNTAQEVLCEWLSRQGLSVSLSDLYISSDRHSRKNLLEEVYYG 610
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEA R+S+ S LMV ++DFLV E ME KE +I+ AELFQAS++A+++
Sbjct: 611 LQEAGRLSEVSSLMVDQHRDFLV---EHMGNMEDSIKEHTAISSHARAELFQASVSASRS 667
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L Y+YA N N+FI+M+K+GSKGNLQK VQHSMC
Sbjct: 668 VFRDLQNLVYRYASNENSFISMLKSGSKGNLQKFVQHSMC 707
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 173 bits (439), Expect = 2e-41
Identities = 86/160 (53%), Positives = 110/160 (68%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLFQ L+ HC + L L D Q +LCEWL+ RGL+VSLSDLYLS DS SH+N++DDI CG
Sbjct: 598 NLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCG 657
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAE + LMV +++ L+ E++ ++ ER+ +Q A L QAS+ A K
Sbjct: 658 LQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKK 717
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L YKY+G N+ + M KAGSKGNL KLVQHSMC
Sbjct: 718 VFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMC 757
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
Length = 1379
Score = 170 bits (430), Expect = 2e-40
Identities = 87/143 (60%), Positives = 109/143 (76%)
Frame = +2
Query: 56 LNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCGLQEAERVSDASLLMVGC 235
L C E+LCEW+ RRGL+VSL+DLYLS D S KNLLD+I GLQEA+ +SD S LMV
Sbjct: 538 LYQCLEVLCEWIARRGLSVSLADLYLSSDQHSRKNLLDEIFYGLQEAKMLSDISSLMVDW 597
Query: 236 NQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKTVFRDMQTLAYKYAGNHN 415
NQDFLV+C EE ME+ E++ I +QT AE+FQAS++ +K+V RD+Q LAYKY +N
Sbjct: 598 NQDFLVECPEEVG-MENLLTEQMLIGQQTKAEIFQASVSVSKSVVRDIQNLAYKYPSKNN 656
Query: 416 AFIAMMKAGSKGNLQKLVQHSMC 484
+FIAM+KAGSKGNL KL Q S+C
Sbjct: 657 SFIAMLKAGSKGNLAKLFQQSLC 679
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 167 bits (424), Expect = 1e-39
Identities = 89/160 (55%), Positives = 111/160 (69%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLF L++H G L +L Q +LCEWL+ RGL+VSLSDLY+S DS S +N++D++ G
Sbjct: 360 NLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSG 419
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAER+S LLM+ N+DFL EES F E +SI +Q A L QAS +A K
Sbjct: 420 LQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKK 479
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L Y YA N N+ +AM+KAGSKGNL KLVQHSMC
Sbjct: 480 VFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMC 519
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 167 bits (424), Expect = 1e-39
Identities = 89/160 (55%), Positives = 111/160 (69%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLF L++H G L +L Q +LCEWL+ RGL+VSLSDLY+S DS S +N++D++ G
Sbjct: 573 NLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSG 632
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAER+S LLM+ N+DFL EES F E +SI +Q A L QAS +A K
Sbjct: 633 LQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKK 692
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L Y YA N N+ +AM+KAGSKGNL KLVQHSMC
Sbjct: 693 VFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMC 732
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 167 bits (423), Expect = 1e-39
Identities = 87/161 (54%), Positives = 107/161 (66%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++H + L L QE+LCEWL+ RGL+VSLSDLYLS DS S KN++D+I C
Sbjct: 600 GNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQKNMMDEIFC 659
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GLQE E+ + LMV N DFLV EE D E++ +Q A L QAS+ + K
Sbjct: 660 GLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSAALSQASVDSFK 719
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L YKYA N+ + M KAGSKGNL KLVQHS+C
Sbjct: 720 QVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLC 760
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 167 bits (422), Expect = 2e-39
Identities = 84/161 (52%), Positives = 109/161 (67%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++ C D+ L L QE+LCEWL+ RGL+VSLSDLYL PDS+S +N++D++
Sbjct: 591 GNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLF 650
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GLQ+A+ + MV +DFL E+ Y +F E + +Q A L QAS+ A K
Sbjct: 651 GLQDAKGTCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHEKQRSAALSQASVDAFK 710
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+QTL YKYA NA +AM K+GSKGNL K+VQHSMC
Sbjct: 711 HVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMC 751
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 166 bits (419), Expect = 4e-39
Identities = 88/160 (55%), Positives = 111/160 (69%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLF L++H G L +L Q +LCEWL+ RGL+VSLSDLY+S DS S +N++D++ G
Sbjct: 573 NLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSG 632
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAER+S LLM+ N+DFL EES F E +SI +Q A L QAS +A K
Sbjct: 633 LQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKK 692
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L Y YA N N+ +AM+KAGSKGNL KLVQH+MC
Sbjct: 693 VFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMC 732
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 166 bits (419), Expect = 4e-39
Identities = 88/160 (55%), Positives = 111/160 (69%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
NLF L++H G L +L Q +LCEWL+ RGL+VSLSDLY+S DS S +N++D++ G
Sbjct: 265 NLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSG 324
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAER+S LLM+ N+DFL EES F E +SI +Q A L QAS +A K
Sbjct: 325 LQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKK 384
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFRD+Q L Y YA N N+ +AM+KAGSKGNL KLVQH+MC
Sbjct: 385 VFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMC 424
>ref|XP_002298071.2| hypothetical protein POPTR_0001s08650g [Populus trichocarpa]
gi|550346847|gb|EEE82876.2| hypothetical protein
POPTR_0001s08650g [Populus trichocarpa]
Length = 1109
Score = 161 bits (407), Expect = 1e-37
Identities = 88/178 (49%), Positives = 111/178 (62%), Gaps = 17/178 (9%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++HC + L L Q +LCEWL+ RGL+VSLSDLYL PDS S KN++D+I
Sbjct: 377 GNLFQSLVKHCHGQVLDFLYAAQRVLCEWLSMRGLSVSLSDLYLCPDSNSRKNMMDEIWY 436
Query: 182 GLQEAERVSDASLLMVGCNQDFLV-----------------DCSEESDYMEHFQKERISI 310
GLQ+A+ + LMV +DFL CSEE + F ER+
Sbjct: 437 GLQDADYACNLKHLMVDSCRDFLTGNNEEDQCNVERLRFLSGCSEEDYCVMAFDGERLCY 496
Query: 311 ARQTVAELFQASLTAAKTVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
+Q A L Q+S+ A + VFRD+Q+L YKYA N+F+AM KAGSKGNL KLVQHSMC
Sbjct: 497 EKQRSAALSQSSVDAFRLVFRDIQSLVYKYASQDNSFLAMFKAGSKGNLLKLVQHSMC 554
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 149 bits (377), Expect = 3e-34
Identities = 82/162 (50%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L HC + L + Q +LCEWL+ RGL+VSLSDLYL+ D+ S KNL+++I
Sbjct: 577 GNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRKNLMEEIFY 636
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSE-ESDYMEHFQKERISIARQTVAELFQASLTAA 358
GLQEAE LM+ QDFL+ E +S F E +Q A L Q ++ A
Sbjct: 637 GLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTFGSEHFCYQKQKTAALSQVTVDAI 696
Query: 359 KTVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
K FRD+Q LAYKYAG N+ +AM KAGSKGN+ KLVQH MC
Sbjct: 697 KEGFRDVQNLAYKYAGVDNSLLAMFKAGSKGNMLKLVQHCMC 738
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 149 bits (376), Expect = 4e-34
Identities = 79/160 (49%), Positives = 107/160 (66%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
N+FQ L+ H + L L Q++LCEWL+ G +VSLSDLYLS DS + KN++++I G
Sbjct: 499 NVFQSLVEHYQGKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEIFYG 558
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQ+AE+ + L++ C DFL +ES+ +R++ RQ A L QAS+ A +
Sbjct: 559 LQDAEQACNFKQLLLDCYCDFLSGSIQESENAITVDADRLNYERQISAALSQASVDAFRQ 618
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFR++Q+LA KYA NAF+AM KAGSKGNL KLVQHSMC
Sbjct: 619 VFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMC 658
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 149 bits (375), Expect = 5e-34
Identities = 80/160 (50%), Positives = 108/160 (67%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
N+FQ L+ H + L +L+ Q+ LCEWL+ G +VSLSDLYLS DS + KN++++IS G
Sbjct: 594 NVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYG 653
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAE+ D + L+V DFL +E + + + ++ RQ A L QAS+ A +
Sbjct: 654 LQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQ 713
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFR++Q+LA KYA NAF+AM KAGSKGNL KLVQHSMC
Sbjct: 714 VFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMC 753
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 149 bits (375), Expect = 5e-34
Identities = 80/160 (50%), Positives = 108/160 (67%)
Frame = +2
Query: 5 NLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISCG 184
N+FQ L+ H + L +L+ Q+ LCEWL+ G +VSLSDLYLS DS + KN++++IS G
Sbjct: 594 NVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYG 653
Query: 185 LQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAKT 364
LQEAE+ D + L+V DFL +E + + + ++ RQ A L QAS+ A +
Sbjct: 654 LQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQ 713
Query: 365 VFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VFR++Q+LA KYA NAF+AM KAGSKGNL KLVQHSMC
Sbjct: 714 VFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMC 753
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 148 bits (374), Expect = 7e-34
Identities = 82/161 (50%), Positives = 107/161 (66%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++ D+ L L QE+LCEWL+ RG+TVSLSDLYL+ S S K L+D+I
Sbjct: 586 GNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 645
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GL+EA+ + LMV + +FL+ +E+S+ Q E +S +Q A L QAS+ A K
Sbjct: 646 GLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALSQASVDAFK 704
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VF D+Q LAYKY N+ +AM KAGSKGNL KLVQHS+C
Sbjct: 705 HVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLC 745
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 148 bits (374), Expect = 7e-34
Identities = 82/161 (50%), Positives = 107/161 (66%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++ D+ L L QE+LCEWL+ RG+TVSLSDLYL+ S S K L+D+I
Sbjct: 624 GNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 683
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GL+EA+ + LMV + +FL+ +E+S+ Q E +S +Q A L QAS+ A K
Sbjct: 684 GLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALSQASVDAFK 742
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VF D+Q LAYKY N+ +AM KAGSKGNL KLVQHS+C
Sbjct: 743 HVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLC 783
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 145 bits (366), Expect = 6e-33
Identities = 80/161 (49%), Positives = 106/161 (65%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLFQ L++ D+ L L QE+LCEWL+ RG+TVSLSDLYL+ S S K L+D+I
Sbjct: 586 GNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFY 645
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GL+EA+ + LMV + +FL+ +++S+ Q E +S +Q A L QAS+ A K
Sbjct: 646 GLREAQDTCNFQQLMVDSHMNFLMS-AKDSESTRSLQGEHLSYEKQRSAALSQASVDAFK 704
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
VF D+Q LAYKY N+ + M KAGSKGNL KLVQHS+C
Sbjct: 705 HVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLC 745
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 144 bits (364), Expect = 1e-32
Identities = 76/161 (47%), Positives = 103/161 (63%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLF L++ C +AL L QE+LCEWL+ RGL+VSLSD+YLS DS S KN++D++ C
Sbjct: 619 GNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFC 678
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GL AE+ L+V +Q+FL+ E + + + RQ A L Q+S+ A K
Sbjct: 679 GLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQSSVCAFK 738
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
FRD+Q L Y+YA N+ +AM+KAGSKGNL KLVQ +C
Sbjct: 739 QKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLC 779
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 144 bits (364), Expect = 1e-32
Identities = 76/161 (47%), Positives = 103/161 (63%)
Frame = +2
Query: 2 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHKNLLDDISC 181
GNLF L++ C +AL L QE+LCEWL+ RGL+VSLSD+YLS DS S KN++D++ C
Sbjct: 589 GNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFC 648
Query: 182 GLQEAERVSDASLLMVGCNQDFLVDCSEESDYMEHFQKERISIARQTVAELFQASLTAAK 361
GL AE+ L+V +Q+FL+ E + + + RQ A L Q+S+ A K
Sbjct: 649 GLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQSSVCAFK 708
Query: 362 TVFRDMQTLAYKYAGNHNAFIAMMKAGSKGNLQKLVQHSMC 484
FRD+Q L Y+YA N+ +AM+KAGSKGNL KLVQ +C
Sbjct: 709 QKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLC 749