BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00041298
         (543 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus...   204   1e-50
ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containi...   176   4e-42
gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]     174   2e-41
ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi...   174   2e-41
ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containi...   169   4e-40
gb|EPS63937.1| hypothetical protein M569_10844, partial [Genlise...   169   5e-40
ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citr...   166   3e-39
ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phas...   163   3e-38
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   162   5e-38
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   159   4e-37
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...   155   8e-36
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   154   1e-35
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]   154   1e-35
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...   141   1e-31
ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutr...   140   2e-31
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...   140   3e-31
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...   140   3e-31
ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Caps...   138   1e-30
gb|ABR17838.1| unknown [Picea sitchensis]                             115   7e-24
ref|XP_006851006.1| hypothetical protein AMTR_s00025p00218280 [A...   114   1e-23

>gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus guttatus]
          Length = 607

 Score =  204 bits (519), Expect = 1e-50
 Identities = 105/181 (58%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTAMI+GCIE +DY++AF   R MQ  D+KPN+VTLVS+LPACA L SI  G+EIH
Sbjct: 224 NEVSWTAMITGCIEDRDYIKAFAFFRMMQCEDIKPNKVTLVSILPACAELHSISLGEEIH 283

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A RH YD +A+F SALLHMYC+ +G L IA+LIF+R + K +VMWSSMIAGYS  KD+
Sbjct: 284 GYAFRHGYDLDARFLSALLHMYCK-FGALHIAKLIFDRSLKKEIVMWSSMIAGYSHDKDS 342

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFG-YDLFIQN 538
           AR+AI+LFN MQ++GI PN+ T LA                 HGY LKSG     + +QN
Sbjct: 343 ARQAIKLFNEMQMDGIQPNSVTLLALISACNNLLSVTDGSGVHGYGLKSGLATTHVEVQN 402

Query: 539 A 541
           A
Sbjct: 403 A 403


>ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum lycopersicum]
          Length = 603

 Score =  176 bits (445), Expect = 4e-42
 Identities = 87/180 (48%), Positives = 118/180 (65%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTAMISGC+  + ++ A +  R+MQF +VKPNRVTL S+LPACA L+   +GKEI 
Sbjct: 217 NEVSWTAMISGCVAEKLHIEAVELFRSMQFENVKPNRVTLTSLLPACAELK---YGKEIQ 273

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A RH +DS+A+FSSA++HMY  C G L+  + +F+R   K VVMW+++I  Y+++K +
Sbjct: 274 GYAFRHGFDSDAKFSSAVVHMYSGCGGALQTIKNVFDRSTKKDVVMWTALITSYTRNKSS 333

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
            REAI+LFN M + GI PN+ T LA                 HGY   SG    LFI N+
Sbjct: 334 CREAIKLFNEMLLSGIQPNDVTLLALICACTNLLSVCHGRGMHGYAFTSGLSSHLFIGNS 393



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVR-AFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHG 184
           V WTA+I+     +   R A      M  S ++PN VTL++++ AC  L S+ HG+ +HG
Sbjct: 318 VMWTALITSYTRNKSSCREAIKLFNEMLLSGIQPNDVTLLALICACTNLLSVCHGRGMHG 377

Query: 185 FATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNA 364
           +A      S     ++L++MY +C G LK +   F+    +    WS++I  Y  +    
Sbjct: 378 YAFTSGLSSHLFIGNSLINMYSKC-GFLKDSAQAFQEMSIRDSASWSALINAYG-THGFG 435

Query: 365 REAIRLFNRMQIEGILPNNATFLA 436
            +A+ LFN M+  GI  ++   LA
Sbjct: 436 DKALELFNEMKESGIKTDSIALLA 459



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 3/181 (1%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYV-RAFDCIRAM-QFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           +SW +MI+ C     Y+  + +  + M       P    + SV+PAC   ++   G+ IH
Sbjct: 116 ISWNSMIN-CYYMNGYLLESLELFKEMYNVHGFVPKPELIASVVPACVQTKNFKLGRAIH 174

Query: 182 GFA-TRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKD 358
                    ++    ++AL+  Y +C     +A L+F+R   K  V W++MI+G    K 
Sbjct: 175 ALTIVDERMETSILLTTALVDFYWKCCEP-DLAFLVFQRMEVKNEVSWTAMISGCVAEKL 233

Query: 359 NAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQN 538
           +  EA+ LF  MQ E + PN  T  +                  GY  + GF  D    +
Sbjct: 234 HI-EAVELFRSMQFENVKPNRVTLTS---LLPACAELKYGKEIQGYAFRHGFDSDAKFSS 289

Query: 539 A 541
           A
Sbjct: 290 A 290


>gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]
          Length = 574

 Score =  174 bits (440), Expect = 2e-41
 Identities = 86/180 (47%), Positives = 111/180 (61%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEV+WTA+ISGC    D+ RA   +RAMQ   V PNRVT++++LP CA L  I HGKEIH
Sbjct: 210 NEVTWTAVISGCAASLDFNRALHSVRAMQVEGVSPNRVTMMAILPVCAELGYIKHGKEIH 269

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G A RH    +  FS+AL+HMYC+C G    A LIFE    + VV+WSS+I GYS     
Sbjct: 270 GHAVRHGIHLDPHFSAALVHMYCKCEGASVAAELIFESSSVRDVVLWSSIIGGYSSHHGR 329

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
             +A++LFN+MQ+EG  PN+ T LA                 HGY+L+SG   D+F+ NA
Sbjct: 330 EAKAVKLFNQMQVEGTKPNSVTLLAVISASTSLSSLDLGREVHGYSLQSGLNSDIFVGNA 389



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDY-VRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHG 184
           V W+++I G         +A      MQ    KPN VTL++V+ A  +L S+  G+E+HG
Sbjct: 314 VLWSSIIGGYSSHHGREAKAVKLFNQMQVEGTKPNSVTLLAVISASTSLSSLDLGREVHG 373

Query: 185 FATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNA 364
           ++ +   +S+    +AL+ MY +C G +  A  IF     +  V WS++I G+       
Sbjct: 374 YSLQSGLNSDIFVGNALIDMYAKC-GCIDSACQIFVEMPTRDSVSWSTLICGHG-LHGYG 431

Query: 365 REAIRLFNRMQIEGILPNNATFLA 436
             A++LF+ MQ  G+  +  T LA
Sbjct: 432 EHALQLFHEMQKGGLEADEITILA 455


>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum tuberosum]
          Length = 599

 Score =  174 bits (440), Expect = 2e-41
 Identities = 87/180 (48%), Positives = 115/180 (63%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTAMISGCI  + Y RA +  R+MQ  +VKPNRVTL S+LPACA L+   +GKEIH
Sbjct: 216 NEVSWTAMISGCIAEELYARAVELFRSMQLENVKPNRVTLTSILPACAELK---YGKEIH 272

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A RH +D + +FSSA++HMY  C   L+  + +F+R  NK VVMW+++I  Y+++K +
Sbjct: 273 GYAFRHGFDLDTKFSSAIVHMYSGCGEALQPMKNVFDRSTNKDVVMWTALITSYTRNKSS 332

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
             EAI+LFN M + GI PN+ T LA                 HGY   SG    LFI N+
Sbjct: 333 CEEAIKLFNEMLLSGIQPNDVTLLALISASTNLLSVCHGRGMHGYAFTSGLSSHLFIGNS 392



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVR-AFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHG 184
           V WTA+I+     +     A      M  S ++PN VTL++++ A   L S+ HG+ +HG
Sbjct: 317 VMWTALITSYTRNKSSCEEAIKLFNEMLLSGIQPNDVTLLALISASTNLLSVCHGRGMHG 376

Query: 185 FATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNA 364
           +A      S     ++L++MY +C G LK +  +F+    +    WS++I  Y  +    
Sbjct: 377 YAFTSGLSSHLFIGNSLINMYSKC-GFLKDSAQVFQEMSIRNSASWSALINAYG-THGFG 434

Query: 365 REAIRLFNRMQIEGILPNNATFLA 436
            +A+ LFN M+  GI  ++   LA
Sbjct: 435 NKALELFNEMKESGIKTDSIALLA 458



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYV----RAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKE 175
           +SW +MI+ C     Y+    + F  +  +Q    KP  +   SV+ AC  ++++  G+ 
Sbjct: 115 ISWNSMIN-CYYMNGYLLESLKLFKEMYNVQGFVPKPELIA--SVISACIQIKNLKLGRA 171

Query: 176 IHGFAT-RHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQS 352
           IH         ++    ++AL+  Y +C     +A L+F+R   K  V W++MI+G    
Sbjct: 172 IHALTVVDERMETSIFLTTALVDFYWKCCEP-DLAFLVFQRMEVKNEVSWTAMISGCIAE 230

Query: 353 KDNAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFI 532
           +  AR A+ LF  MQ+E + PN  T  +                 HGY  + GF  D   
Sbjct: 231 ELYAR-AVELFRSMQLENVKPNRVTLTS---ILPACAELKYGKEIHGYAFRHGFDLDTKF 286

Query: 533 QNA 541
            +A
Sbjct: 287 SSA 289


>ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 584

 Score =  169 bits (428), Expect = 4e-40
 Identities = 89/180 (49%), Positives = 113/180 (62%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N VSWTAMISGCI  Q Y  A +C R MQ   +KPNRVT++++LPACA L  I HGKEIH
Sbjct: 202 NGVSWTAMISGCIANQCYGMAMNCFREMQVQGLKPNRVTVLAILPACAELGDIGHGKEIH 261

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
            +  RH ++S+   S+AL+HMYC+    ++ A LIFE+   K VVMWSSMI  YSQ  D+
Sbjct: 262 AYTYRHGFESDPHCSAALIHMYCKRGNEMRPAELIFEKVSLKDVVMWSSMIGSYSQCGDS 321

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
            + A++LF+RM+  GI PN+ T LA                 H Y LKSG   D+FI NA
Sbjct: 322 VK-ALQLFSRMRAGGIDPNSVTLLAIISTCTSLSSLQIGCGVHSYVLKSGLNSDIFIGNA 380



 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 43/143 (30%), Positives = 76/143 (53%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MI    +  D V+A      M+   + PN VTL++++  C +L S+  G  +H +
Sbjct: 306 VMWSSMIGSYSQCGDSVKALQLFSRMRAGGIDPNSVTLLAIISTCTSLSSLQIGCGVHSY 365

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +   +S+    +AL++MY +C G L  +  IF+   +   V WS+M+  + +      
Sbjct: 366 VLKSGLNSDIFIGNALINMYAKC-GCLTDSHKIFKEMPSIDSVSWSTMVESFGR-HGRGN 423

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA++LF  MQ  GI P+  +FL+
Sbjct: 424 EALKLFLEMQDRGIEPDAVSFLS 446



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           ++W ++I+  ++  +  +A D ++ M F+        + S++  CA  R    G++IHG 
Sbjct: 101 ITWNSVINCYVQNGNLAKAIDVLKQMHFNGFTLKPELIASIVSVCARTRKYRQGRQIHGL 160

Query: 188 AT--RHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
                   +     S+ALL +Y  C   L    + +   V  G V W++MI+G   ++  
Sbjct: 161 VVVDDKINEESVFLSTALLDLYMRCNQTLTAFYVFYNMQVKNG-VSWTAMISGCIANQCY 219

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYD 523
              A+  F  MQ++G+ PN  T LA                 H YT + GF  D
Sbjct: 220 GM-AMNCFREMQVQGLKPNRVTVLAILPACAELGDIGHGKEIHAYTYRHGFESD 272


>gb|EPS63937.1| hypothetical protein M569_10844, partial [Genlisea aurea]
          Length = 512

 Score =  169 bits (427), Expect = 5e-40
 Identities = 92/182 (50%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N  SWTAMI G I++ D++RA +C++AMQ  + +PN VTL+SVLPA A       GKEIH
Sbjct: 152 NVASWTAMICGWIQYGDHIRAIECLKAMQRENTEPNVVTLISVLPAVAP------GKEIH 205

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWG--GLKIARLIFERFVNKGVVMWSSMIAGYSQSK 355
            +A R   DS+ + SSALLH+YC C G   L +ARLIF+R   K + MWSSMIAGYS+SK
Sbjct: 206 AYAIRRGCDSDPRLSSALLHVYCSCGGVRNLHVARLIFDRSA-KEITMWSSMIAGYSKSK 264

Query: 356 DNAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQ 535
             AR++I+LFNRMQ EGI PNN T L                  HG+++KSG    L +Q
Sbjct: 265 GQARKSIKLFNRMQTEGIRPNNVTMLGLISACSNLISLSDGHGVHGHSMKSGLISHLPVQ 324

Query: 536 NA 541
           NA
Sbjct: 325 NA 326



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = +2

Query: 14  WTAMISGCIEFQDYVR-AFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGFA 190
           W++MI+G  + +   R +      MQ   ++PN VT++ ++ AC+ L S+  G  +HG +
Sbjct: 253 WSSMIAGYSKSKGQARKSIKLFNRMQTEGIRPNNVTMLGLISACSNLISLSDGHGVHGHS 312

Query: 191 TRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNARE 370
            +    S     +A++ MY +C G L  +  +F    N+  + WS++I  Y      A +
Sbjct: 313 MKSGLISHLPVQNAMIDMYAKC-GSLSESEKVFHGISNRDCISWSALINAYG-LYGCAEK 370

Query: 371 AIRLFNRMQIEGILPNNATFLA 436
           A++ F  +    I P+   +LA
Sbjct: 371 ALKCFYELLGSEIEPDGVAYLA 392



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           + VSW++MI+         +A      M      P    + + L AC    +   G+ IH
Sbjct: 49  DSVSWSSMINCYSRSGLSRKAMHTFTQMYSRGFAPTPELMAACLSACRKDENSKFGRAIH 108

Query: 182 G--FATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSK 355
           G  F      D  +  +S+L+  YC+    L  A  +F+R   K V  W++MI G+ Q  
Sbjct: 109 GLVFVDERVEDCSSFLASSLVDFYCKAHD-LSTACCVFDRIPEKNVASWTAMICGWIQYG 167

Query: 356 DNAREAIRLFNRMQIEGILPNNATFLA 436
           D+ R AI     MQ E   PN  T ++
Sbjct: 168 DHIR-AIECLKAMQRENTEPNVVTLIS 193


>ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citrus clementina]
           gi|557556380|gb|ESR66394.1| hypothetical protein
           CICLE_v10007840mg [Citrus clementina]
          Length = 580

 Score =  166 bits (420), Expect = 3e-39
 Identities = 91/180 (50%), Positives = 113/180 (62%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTAMISGCI+ Q+Y    D  RAMQ   VKP RVTL  VL ACA LR + +GK IH
Sbjct: 195 NEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIH 254

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A    +D +   S+AL+HMYCEC   L  AR+IFER   K VV+WSS+I GYSQS D 
Sbjct: 255 GYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGD- 313

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
             EA++LF+RM++E I PN+ T LA                 H Y +K+G  +D+ I NA
Sbjct: 314 LSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNA 373



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 41/143 (28%), Positives = 73/143 (51%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I G  +  D   A      M+   ++PN VTL+++L +C     + HG  +H +
Sbjct: 299 VIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCY 358

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +   + +    +AL++MY +C G +  +  IF     +  V W+++I+GY        
Sbjct: 359 IMKAGLNFDVSIGNALMNMYSKC-GSITSSHQIFNEMAARDFVSWTTLISGYG-FHGYGE 416

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA++LF  MQ  G+ P+  T LA
Sbjct: 417 EALQLFLEMQESGVEPDAITVLA 439



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           +SW ++I+   +   YVR+ +  R M           L  ++  C+ +  +  G++IH  
Sbjct: 95  ISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHAL 154

Query: 188 A-TRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNA 364
                 ++     S+ALL +Y +C   L IA  +FE+ V +  V W++MI+G   S+ N 
Sbjct: 155 VIVDGSFELSVFVSTALLDLYSKCHHWL-IALRVFEQMVIRNEVSWTAMISGCIDSQ-NY 212

Query: 365 REAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYD 523
              I LF  MQ EG+ P   T                    HGY    GF +D
Sbjct: 213 DTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFD 265


>ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
           gi|561021575|gb|ESW20346.1| hypothetical protein
           PHAVU_006G201000g [Phaseolus vulgaris]
          Length = 607

 Score =  163 bits (412), Expect = 3e-38
 Identities = 87/180 (48%), Positives = 111/180 (61%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTAMISGCI  QDY  AF C RAMQ   V PNRVT +++L ACAA   + HGKEIH
Sbjct: 219 NEVSWTAMISGCIANQDYDGAFACFRAMQAEGVFPNRVTSIALLQACAAPGFLKHGKEIH 278

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A R  ++S + FSSAL++MYC C   L +A LIFE    + VV+WSS+I  YS+  D+
Sbjct: 279 GYAFRRGFESCSTFSSALINMYCHCGESLHLAELIFEGSCCRDVVLWSSVIGSYSRRGDS 338

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
            R A+ LFN+M+ E   PN+ T LA                 HG+  K GF + + + NA
Sbjct: 339 HR-ALELFNKMRSEETEPNHVTLLAVISACTNISSLKCGCGLHGHVFKCGFSFSISVGNA 397



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/143 (31%), Positives = 74/143 (51%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       D  RA +    M+  + +PN VTL++V+ AC  + S+  G  +HG 
Sbjct: 323 VLWSSVIGSYSRRGDSHRALELFNKMRSEETEPNHVTLLAVISACTNISSLKCGCGLHGH 382

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  +       +AL++MY +C G L  +R IF    N+  V WSS+I  Y       +
Sbjct: 383 VFKCGFSFSISVGNALINMYAKC-GCLDGSRKIFLEMWNRDSVTWSSLINAYG-LHGCGK 440

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           +A++LF  M+  G+ P+  T LA
Sbjct: 441 QALQLFYEMRERGVKPDAITILA 463


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  162 bits (410), Expect = 5e-38
 Identities = 84/180 (46%), Positives = 111/180 (61%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N VSWTA++SGC    DY  A DC RAMQ + V+PNRVTL+++LPA A L     GKEIH
Sbjct: 193 NVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIH 252

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A RH +D +  F S+L+H+YC    GL++A+L FER   K VVMWSS+I  Y +S D+
Sbjct: 253 GYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADS 312

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
             EA++LF  M+ +G  PN+ T LA                 HGY +K G  +D +I NA
Sbjct: 313 I-EALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNA 371



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/143 (32%), Positives = 78/143 (54%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       D + A    R M+    +PN VTL++V+ AC  L S+ +G   HG+
Sbjct: 297 VMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGY 356

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +   + +    +AL++MY +C G +  +  IF+    K  V WS++I  Y     + +
Sbjct: 357 IVKCGLNFDTYIGNALINMYSKC-GCVVASHQIFKEMHIKDSVSWSTLITAYG-LHGHGK 414

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+ LF+ MQ++G+ P+  TFLA
Sbjct: 415 EALCLFHEMQLQGVEPDAMTFLA 437


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  159 bits (402), Expect = 4e-37
 Identities = 84/180 (46%), Positives = 110/180 (61%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N VSWT MISGCI  QDY  AF C RAMQ   V PNRVT +++L ACA    + HGKEIH
Sbjct: 218 NVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIH 277

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A RH ++S   FSSAL++MYC+C   + +A LIFE    + VV+WSS+I  +S+  D+
Sbjct: 278 GYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDS 337

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
            + A++LFN+M+ E I PN  T LA                 HGY  K GF + + + NA
Sbjct: 338 FK-ALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNA 396



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/143 (31%), Positives = 76/143 (53%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       D  +A      M+  +++PN VTL++V+ AC  L S+ HG  +HG+
Sbjct: 322 VLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGY 381

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  +       +AL++MY +C G L  +R +F    N+  V WSS+I+ Y        
Sbjct: 382 IFKFGFCFSISVGNALINMYAKC-GCLNGSRKMFLEMPNRDNVTWSSLISAYG-LHGCGE 439

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           +A+++F  M   G+ P+  TFLA
Sbjct: 440 QALQIFYEMNERGVKPDAITFLA 462


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score =  155 bits (391), Expect = 8e-36
 Identities = 82/180 (45%), Positives = 108/180 (60%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTA ISGC   QDY  AF+C R MQ   VKPNRVTL+++L AC       +GKEIH
Sbjct: 235 NEVSWTAAISGCTANQDYDVAFECFREMQVEGVKPNRVTLIALLAACERPGFAKYGKEIH 294

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+  RH ++S   FSSAL+++YC+C   L  A LIFER   + VV+WSS+I  YS+  ++
Sbjct: 295 GYGFRHGFNSCHSFSSALINVYCQCGESLHFAELIFERSSLRDVVLWSSIIGSYSRRGES 354

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
            + A++LFN+M+ E   PN  T LA                 H Y LK G  + +F+ NA
Sbjct: 355 VK-ALKLFNKMRTEETEPNYVTLLAVISACTNLSSLKHGSGVHCYILKFGLDFSIFVCNA 413



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/143 (32%), Positives = 75/143 (52%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       + V+A      M+  + +PN VTL++V+ AC  L S+ HG  +H +
Sbjct: 339 VLWSSIIGSYSRRGESVKALKLFNKMRTEETEPNYVTLLAVISACTNLSSLKHGSGVHCY 398

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +   D      +AL++MY +C G L  +  IF    N+  V WSS+I+ Y        
Sbjct: 399 ILKFGLDFSIFVCNALINMYAKC-GCLDDSLKIFLETPNRDSVTWSSLISAYG-LHGCGE 456

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           +A++LF  M+  G+ P+  TFLA
Sbjct: 457 QALQLFYEMKERGVTPDAVTFLA 479


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  154 bits (389), Expect = 1e-35
 Identities = 81/180 (45%), Positives = 108/180 (60%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTA+ISGC   QDY  A  C R MQ   V PNRVTL+++L ACA    + +GKEIH
Sbjct: 237 NEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIH 296

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A R  +DS   FS AL+++YCEC   L +A  IFE    + VV+WSS+I  Y++ +  
Sbjct: 297 GYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYAR-RGE 355

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
           + +A++LFN+M+ E   PN  T LA                 HGY LK G G+ +F+ NA
Sbjct: 356 SDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNA 415



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/143 (30%), Positives = 72/143 (50%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       +  +A      M+  + +PN VTL++V+ AC  L S  HG  IHG+
Sbjct: 341 VLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGY 400

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +          +AL++MY +C G L  +R IF    ++  V W+SMI+ Y        
Sbjct: 401 ILKFGIGFSIFVCNALINMYAKC-GSLDDSRKIFLEMPSRDSVTWNSMISAYG-LHGYGE 458

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           +A++ F  M+  G+  +  TFLA
Sbjct: 459 QALQHFYEMKERGVKLDAVTFLA 481


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score =  154 bits (389), Expect = 1e-35
 Identities = 81/180 (45%), Positives = 108/180 (60%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           NEVSWTA+ISGC   QDY  A  C R MQ   V PNRVTL+++L ACA    + +GKEIH
Sbjct: 237 NEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIH 296

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+A R  +DS   FS AL+++YCEC   L +A  IFE    + VV+WSS+I  Y++ +  
Sbjct: 297 GYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYAR-RGE 355

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
           + +A++LFN+M+ E   PN  T LA                 HGY LK G G+ +F+ NA
Sbjct: 356 SDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNA 415



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/112 (32%), Positives = 58/112 (51%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I       +  +A      M+  + +PN VTL++V+ AC  L S  HG  IHG+
Sbjct: 341 VLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGY 400

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGY 343
             +          +AL++MY +C G L  +R IF    ++  V W+SMI+ Y
Sbjct: 401 ILKFGIGFSIFVCNALINMYAKC-GSLDDSRKIFLEMPSRDSVTWNSMISAY 451


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  141 bits (355), Expect = 1e-31
 Identities = 79/181 (43%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAAL-RSIMHGKEI 178
           NEVSWTAMISGC+   +Y    D  RAMQ  +++PNRVTL+SVLPAC  L   +   KEI
Sbjct: 215 NEVSWTAMISGCVANYNYEVGIDFFRAMQRENLRPNRVTLLSVLPACVELGYGLRLVKEI 274

Query: 179 HGFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKD 358
           HGF+ RH + S+ +  +A + MYC C G + ++RL+FE    + VVMWSSMI+GY+++ D
Sbjct: 275 HGFSFRHGFHSDDRLIAAFMTMYCRC-GSVSLSRLLFETSKVRDVVMWSSMISGYAENGD 333

Query: 359 NAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQN 538
              EA+ L ++M+ EG  PN+ T LA                 H   LK GF   + + N
Sbjct: 334 -CSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSN 392

Query: 539 A 541
           A
Sbjct: 393 A 393



 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 48/143 (33%), Positives = 70/143 (48%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MISG  E  D   A + +  M+    +PN VTL++V+ AC    S+     +H  
Sbjct: 319 VMWSSMISGYAENGDCSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASLKIASTVHSQ 378

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  + S    S+AL+ MY +C G L  AR +F     K +V WSSMI  Y     +  
Sbjct: 379 ILKCGFMSHILLSNALIDMYAKC-GSLPAAREVFYELNEKDLVSWSSMINAYG-LHGHGS 436

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+ +F  M   G   +   FLA
Sbjct: 437 EALEIFKGMIKAGHEVDGMAFLA 459


>ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutrema salsugineum]
           gi|557113804|gb|ESQ54087.1| hypothetical protein
           EUTSA_v10024712mg [Eutrema salsugineum]
          Length = 602

 Score =  140 bits (353), Expect = 2e-31
 Identities = 77/181 (42%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRS-IMHGKEI 178
           NEVSWTAMISGC+   +Y  +     AMQ  +V+PNRVTL+S+LPAC  L S +   KEI
Sbjct: 218 NEVSWTAMISGCVMNHNYEMSIGLFLAMQRENVRPNRVTLLSILPACVELGSGLRMVKEI 277

Query: 179 HGFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKD 358
           HGF+ RH + S+ + ++AL+ MYC C G + ++RL+F+    + VVMWSSMI GY+ + D
Sbjct: 278 HGFSFRHGFHSDGRLTAALMTMYCRC-GYVSLSRLLFKESKVRDVVMWSSMIGGYADTGD 336

Query: 359 NAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQN 538
              EA+ L ++M+ EG  PN+ T L+                 H + LK GF  ++ + N
Sbjct: 337 -CSEAMNLLSQMRKEGTEPNSVTLLSIVSACTHSASFRFASRIHSHILKCGFMSNILLGN 395

Query: 539 A 541
           A
Sbjct: 396 A 396



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 45/143 (31%), Positives = 66/143 (46%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MI G  +  D   A + +  M+    +PN VTL+S++ AC    S      IH  
Sbjct: 322 VMWSSMIGGYADTGDCSEAMNLLSQMRKEGTEPNSVTLLSIVSACTHSASFRFASRIHSH 381

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  + S     +AL+ MY +C G L  AR +F     K +V WS+MI  Y     +  
Sbjct: 382 ILKCGFMSNILLGNALIDMYAKC-GSLLAARKVFYELNEKDLVSWSTMINAYG-LHGHGS 439

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+  F  M   G   +   FLA
Sbjct: 440 EALETFQGMIKSGEKVDAMAFLA 462


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score =  140 bits (352), Expect = 3e-31
 Identities = 79/183 (43%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALR---SIMHGK 172
           NEVSWTAMISGC+  Q+Y    D  RAMQ  +++PNRVTL+SVLPAC  L    S++  K
Sbjct: 226 NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--K 283

Query: 173 EIHGFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQS 352
           EIHGF+ RH   ++ + ++A + MYC C G + ++R++FE    + VVMWSSMI+GY+++
Sbjct: 284 EIHGFSFRHGCHADERLTAAFMTMYCRC-GNVSLSRVLFETSKVRDVVMWSSMISGYAET 342

Query: 353 KDNAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFI 532
            D   E + L N+M+ EGI  N+ T LA                 H   LK GF   + +
Sbjct: 343 GD-CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 401

Query: 533 QNA 541
            NA
Sbjct: 402 GNA 404



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/143 (30%), Positives = 68/143 (47%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MISG  E  D     + +  M+   ++ N VTL++++ AC     +     +H  
Sbjct: 330 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 389

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  + S     +AL+ MY +C G L  AR +F     K +V WSSMI  Y     +  
Sbjct: 390 ILKCGFMSHILLGNALIDMYAKC-GSLSAAREVFYELTEKDLVSWSSMINAYG-LHGHGS 447

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+ +F  M   G   ++  FLA
Sbjct: 448 EALEIFKGMIKGGHEVDDMAFLA 470


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score =  140 bits (352), Expect = 3e-31
 Identities = 79/183 (43%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALR---SIMHGK 172
           NEVSWTAMISGC+  Q+Y    D  RAMQ  +++PNRVTL+SVLPAC  L    S++  K
Sbjct: 215 NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--K 272

Query: 173 EIHGFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQS 352
           EIHGF+ RH   ++ + ++A + MYC C G + ++R++FE    + VVMWSSMI+GY+++
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRC-GNVSLSRVLFETSKVRDVVMWSSMISGYAET 331

Query: 353 KDNAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFI 532
            D   E + L N+M+ EGI  N+ T LA                 H   LK GF   + +
Sbjct: 332 GD-CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390

Query: 533 QNA 541
            NA
Sbjct: 391 GNA 393



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/143 (30%), Positives = 68/143 (47%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MISG  E  D     + +  M+   ++ N VTL++++ AC     +     +H  
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  + S     +AL+ MY +C G L  AR +F     K +V WSSMI  Y     +  
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKC-GSLSAAREVFYELTEKDLVSWSSMINAYG-LHGHGS 436

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+ +F  M   G   ++  FLA
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLA 459


>ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Capsella rubella]
           gi|482552081|gb|EOA16274.1| hypothetical protein
           CARUB_v10004419mg [Capsella rubella]
          Length = 598

 Score =  138 bits (347), Expect = 1e-30
 Identities = 78/181 (43%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRS-IMHGKEI 178
           NEVSWTAMISGC+   +Y    +  RAMQ   + PNRVT++SVLPAC  L S +   KEI
Sbjct: 215 NEVSWTAMISGCVANHNYEMGIEMFRAMQREKLIPNRVTVLSVLPACVELGSGLRLLKEI 274

Query: 179 HGFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKD 358
           HGF+ R+ + SE + +++L+ MYC C G + ++RL+F     + VVMWSSMI+GY+++ D
Sbjct: 275 HGFSFRYGFHSEDRLTASLMTMYCRC-GNVSLSRLLFSTSKVRDVVMWSSMISGYAETGD 333

Query: 359 NAREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQN 538
            + EA+ L ++M+ EG  PN+ T LA                 H   LKSGF   + + N
Sbjct: 334 FS-EAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASLTFASTIHSQILKSGFMSHILVGN 392

Query: 539 A 541
           A
Sbjct: 393 A 393



 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W++MISG  E  D+  A + +  M+    +PN VTL++V+ AC    S+     IH  
Sbjct: 319 VMWSSMISGYAETGDFSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASLTFASTIHSQ 378

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
             +  + S     +A++ MY +C G L+ AR ++     K +V WSSMI  Y     +  
Sbjct: 379 ILKSGFMSHILVGNAIIDMYAKC-GSLRAAREVYYELNEKDLVSWSSMINAYG-LHGHGS 436

Query: 368 EAIRLFNRM-----QIEGI 409
           EA+ +F  M     Q++G+
Sbjct: 437 EALEIFQGMIKGGHQVDGM 455


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  115 bits (288), Expect = 7e-24
 Identities = 63/168 (37%), Positives = 94/168 (55%)
 Frame = +2

Query: 11  SWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGFA 190
           SW A+I G      +  A      MQ   +KPN +T+VSVLPACA L ++  G++IHG+A
Sbjct: 289 SWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYA 348

Query: 191 TRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNARE 370
            R  ++S     +AL++MY +C G +  A  +FER   K VV W+++I+GYSQ   +  E
Sbjct: 349 IRSGFESNDVVGNALVNMYAKC-GNVNSAYKLFERMPKKNVVAWNAIISGYSQ-HGHPHE 406

Query: 371 AIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGF 514
           A+ LF  MQ +GI P++   ++                 HGYT++SGF
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454



 Score =  114 bits (285), Expect = 2e-23
 Identities = 63/178 (35%), Positives = 96/178 (53%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           VSW A+I+G  +      A      MQ + +KPN  TLVSV+P CA L ++  GK+IH +
Sbjct: 187 VSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCY 246

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
           A R   +S+    + L++MY +C G +  A  +FER   + V  W+++I GYS +  +  
Sbjct: 247 AIRSGIESDVLVVNGLVNMYAKC-GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH-H 304

Query: 368 EAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
           EA+  FNRMQ+ GI PN+ T ++                 HGY ++SGF  +  + NA
Sbjct: 305 EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA 362



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/179 (29%), Positives = 93/179 (51%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N V W   I G ++   + +A      MQ + + P+++  +SV+ AC +   +  G+++H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
                  ++S+    +AL  MY +C G L+ AR +F+R   + VV W+++IAGYSQ+   
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKC-GSLENARQVFDRMPKRDVVSWNAIIAGYSQN-GQ 201

Query: 362 AREAIRLFNRMQIEGILPNNATFLAXXXXXXXXXXXXXXXXXHGYTLKSGFGYDLFIQN 538
             EA+ LF+ MQ+ GI PN++T ++                 H Y ++SG   D+ + N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 49/145 (33%), Positives = 78/145 (53%)
 Frame = +2

Query: 2   NEVSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIH 181
           N V+W A+ISG  +      A      MQ   +KP+   +VSVLPACA   ++  GK+IH
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIH 446

Query: 182 GFATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDN 361
           G+  R  ++S     + L+ +Y +C G +  A+ +FER   + VV W++MI  Y     +
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKC-GNVNTAQKLFERMPEQDVVSWTTMILAYG-IHGH 504

Query: 362 AREAIRLFNRMQIEGILPNNATFLA 436
             +A+ LF++MQ  G   ++  F A
Sbjct: 505 GEDALALFSKMQETGTKLDHIAFTA 529


>ref|XP_006851006.1| hypothetical protein AMTR_s00025p00218280 [Amborella trichopoda]
           gi|548854677|gb|ERN12587.1| hypothetical protein
           AMTR_s00025p00218280 [Amborella trichopoda]
          Length = 529

 Score =  114 bits (286), Expect = 1e-23
 Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
 Frame = +2

Query: 98  VKPNRVTLVSVLPACAALRSIMHGKEIHGFATRHCYDSEAQFSSALLHMYCECWGGLKIA 277
           +KPNRVTL++ LPACA LR++  GKEIHGFA RHCY S+ + + AL+ MY  C+G + +A
Sbjct: 213 MKPNRVTLITALPACAELRAVKQGKEIHGFAIRHCYASDPRVTGALIDMY-SCFGAVDLA 271

Query: 278 RLIFERF-VNKGVVMWSSMIAGYSQSKDNAREAIRLFNRMQIEGILPNNATFLAXXXXXX 454
            L+F+     + VV+WSS+I G S +   + +A+ LF++M++ G  PN+ T L       
Sbjct: 272 DLVFKGVEQERDVVLWSSIIYGCS-NNGRSLDALDLFSQMRMSGTRPNSVTLLGVLSACT 330

Query: 455 XXXXXXXXXXXHGYTLKSGFGYDLFIQNA 541
                      HGY+ K+G    +F++N+
Sbjct: 331 SLSAMQLGQAVHGYSEKTGLVSAVFVRNS 359



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 46/143 (32%), Positives = 78/143 (54%)
 Frame = +2

Query: 8   VSWTAMISGCIEFQDYVRAFDCIRAMQFSDVKPNRVTLVSVLPACAALRSIMHGKEIHGF 187
           V W+++I GC      + A D    M+ S  +PN VTL+ VL AC +L ++  G+ +HG+
Sbjct: 285 VLWSSIIYGCSNNGRSLDALDLFSQMRMSGTRPNSVTLLGVLSACTSLSAMQLGQAVHGY 344

Query: 188 ATRHCYDSEAQFSSALLHMYCECWGGLKIARLIFERFVNKGVVMWSSMIAGYSQSKDNAR 367
           + +    S     ++L+  Y +C G ++ AR +F+  + +    WSSMI GY  +    +
Sbjct: 345 SEKTGLVSAVFVRNSLISFYSKC-GSIEAARGVFDGILERDCRSWSSMITGYGLN-GQGK 402

Query: 368 EAIRLFNRMQIEGILPNNATFLA 436
           EA+++FN M   G  P+   FL+
Sbjct: 403 EALQVFNEMLNLGFKPDLIVFLS 425



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/112 (30%), Positives = 64/112 (57%)
 Frame = +2

Query: 92  SDVKPNRVTLVSVLPACAALRSIMHGKEIHGFATRHCYDSEAQFSSALLHMYCECWGGLK 271
           S V  N   L S+L AC+AL+++  G++IH    +  ++ +    ++LL MY +C   ++
Sbjct: 63  SSVIGNDFILPSILKACSALQALQLGRQIHCQVIKMGHEFDTITQNSLLTMYAKC-SDVE 121

Query: 272 IARLIFERFVNKGVVMWSSMIAGYSQSKDNAREAIRLFNRMQIEGILPNNAT 427
            A L+F       +V W++MI+ ++++  N  +A++LF  M+   + PN AT
Sbjct: 122 AASLMFNAMSKGDIVSWNAMISCHTRN-GNCTKALQLFKLMEGSDMEPNRAT 172