BLASTX nr result

ID: Mentha27_contig00040852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00040852
         (272 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22462.1| hypothetical protein MIMGU_mgv1a018530mg [Mimulus...    61   2e-07
gb|ACB59206.1| transducin family protein [Brassica oleracea]           60   4e-07
ref|XP_006363568.1| PREDICTED: vegetative incompatibility protei...    59   7e-07
gb|EPS73150.1| hypothetical protein M569_01609 [Genlisea aurea]        57   3e-06
ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis tha...    56   6e-06

>gb|EYU22462.1| hypothetical protein MIMGU_mgv1a018530mg [Mimulus guttatus]
          Length = 415

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/58 (51%), Positives = 42/58 (72%)
 Frame = +1

Query: 1   PFSSSHGGAAVAQSCSAVKAIVVLGEKLVTAHSDHRIRVWRSESSGGKIKLVATLPTA 174
           P SS+H    V +  +AVK+I VLGEKL+TAH DHRIR+++  ++  K +L+ TLPTA
Sbjct: 96  PSSSTHSYNTVTEGHNAVKSIAVLGEKLITAHQDHRIRIYKIHNN-QKYRLITTLPTA 152


>gb|ACB59206.1| transducin family protein [Brassica oleracea]
          Length = 410

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = +1

Query: 1   PFSSSHGGAAVAQSCSAVKAIVVLGEKLVTAHSDHRIRVWRSESSGGKIKLVATLPT 171
           PFSS+  G  V+     VK++V+L +KL++AH DH+IRVW++     K K VATLPT
Sbjct: 99  PFSST--GNIVSAGSGGVKSLVILEDKLISAHQDHKIRVWKTNDDSNKYKCVATLPT 153


>ref|XP_006363568.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Solanum
           tuberosum]
          Length = 431

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +1

Query: 22  GAAVAQSCSAVKAIVVLGEKLVTAHSDHRIRVWR--SESSGGKIKLVATLPT 171
           G  V QS SA+K+IV++G+KL +AH DHRIRVW+  +E+     K +ATLPT
Sbjct: 128 GKTVCQSGSAIKSIVIMGDKLFSAHQDHRIRVWKIDNETPNRNYKCIATLPT 179


>gb|EPS73150.1| hypothetical protein M569_01609 [Genlisea aurea]
          Length = 361

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +1

Query: 31  VAQSCSAVKAIVVLGEKLVTAHSDHRIRVWRSESSGGKIKLVATLPTAG 177
           V + CS VK+I+V   ++ TAH DH+IRVWR      + KLVATLPT G
Sbjct: 59  VVEGCSGVKSILVFAGRIFTAHQDHKIRVWRIGKRFRRYKLVATLPTVG 107


>ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis thaliana]
           gi|2829890|gb|AAC00598.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192360|gb|AEE30481.1| WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 415

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
 Frame = +1

Query: 4   FSSSHGGAAVAQSCSAVKAIVVLGEKLVTAHSDHRIRVWR----SESSGGKIKLVATLPT 171
           +S+      VA     VK++V+LG+KL++AH DH+IRVW+    S   G K K VATLPT
Sbjct: 104 YSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPT 163


Top