BLASTX nr result
ID: Mentha27_contig00038775
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00038775
(573 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida] 153 3e-35
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida] 153 4e-35
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 142 5e-32
ref|XP_007207787.1| hypothetical protein PRUPE_ppa025792mg, part... 142 6e-32
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor... 137 2e-30
ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, ... 136 4e-30
ref|XP_004503287.1| PREDICTED: pentatricopeptide repeat-containi... 136 4e-30
ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Popu... 135 8e-30
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat... 134 1e-29
ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Popu... 134 1e-29
ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily pr... 134 1e-29
ref|XP_002871729.1| pentatricopeptide repeat-containing protein ... 134 1e-29
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor... 134 2e-29
ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|NP_197167.1| pentatricopeptide repeat-containing protein [Ar... 134 2e-29
ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat... 133 3e-29
ref|XP_006400202.1| hypothetical protein EUTSA_v10015756mg, part... 133 4e-29
ref|XP_006584901.1| PREDICTED: putative pentatricopeptide repeat... 132 5e-29
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 132 5e-29
>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 153 bits (387), Expect = 3e-35
Identities = 78/187 (41%), Positives = 113/187 (60%)
Frame = -3
Query: 565 DFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEV 386
+F +++C DDA LFR+M+ P PSV +++KLL V ++ Y LF ++ I V
Sbjct: 46 EFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPV 105
Query: 385 NLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLF 206
+ LSI +N CC + +LGFS+L FK G N IF TLL+GL K +A LF
Sbjct: 106 HEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLF 165
Query: 205 RKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
+K++ +C+PN+ M TVM+GLCK G ++ A DLL++M++ PN YS VID C
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCK 225
Query: 25 NGMVDDA 5
+GM+D A
Sbjct: 226 DGMLDGA 232
Score = 82.0 bits (201), Expect = 1e-13
Identities = 50/179 (27%), Positives = 90/179 (50%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + R MI P V YN ++ + A +FD M ++ IE N+ S +I
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N +++++ + + + G +P++ LL GL +G+T A++ F ++L+
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ T++ G KNG A +++ + N++ Y+AVIDGLC NG +D A
Sbjct: 420 I-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477
Score = 75.9 bits (185), Expect = 7e-12
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF++++ + +P+ Y +++ K + AF L M + N C SI
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C ++ S+L + + P++ ++TL+ L + + +LF +++ L +
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN +V+ GLCK G+ +A ++++ M + G +P+V Y+ +IDG G VD A
Sbjct: 280 -YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Score = 59.3 bits (142), Expect = 7e-07
Identities = 44/178 (24%), Positives = 81/178 (45%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A+++ RE+ +PS+ N LL +L K A FD+M G +L +
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ VE S L + + N+ I+ ++ GL GK +A + F K+ + L
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDD 8
P+ ++SG C+ G A+D+L+ M+ G + + Y+ ++ G + V +
Sbjct: 490 -HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 153 bits (386), Expect = 4e-35
Identities = 75/187 (40%), Positives = 113/187 (60%)
Frame = -3
Query: 565 DFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEV 386
+F +++C DDA LFR+M+ P PSV +++KLL V ++ Y LF ++ I V
Sbjct: 46 EFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPV 105
Query: 385 NLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLF 206
+ LSI +N CC + +LGFS+L FK G N F TL++GL K +A LF
Sbjct: 106 HEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLF 165
Query: 205 RKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
+K++ +C+PN+ M TVM+GLCK G ++ A DLL++M++ PN + Y+ VID C
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCK 225
Query: 25 NGMVDDA 5
+GM+D A
Sbjct: 226 DGMLDGA 232
Score = 80.1 bits (196), Expect = 4e-13
Identities = 49/179 (27%), Positives = 90/179 (50%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + R MI P V YN ++ + A +FD M ++ IE ++ S +I
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N +++++ + + + G +P++ LL GL +G+T A++ F ++L+
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ T++ G KNG A +++ + N++ Y+AVIDGLC NG +D A
Sbjct: 420 I-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477
Score = 73.6 bits (179), Expect = 4e-11
Identities = 46/179 (25%), Positives = 87/179 (48%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D A +F MI S +P + +YN L++ + ++ A + ++ +G++ ++ + ++
Sbjct: 335 DRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ + + + + G+ P+L TLL G G EA S F K L +
Sbjct: 395 LHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRR 453
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
N + V+ GLCKNG+ A + + G +P+V Y+A+I G C G++D+A
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Score = 71.2 bits (173), Expect = 2e-10
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF++++ + +P+ Y +++ K + AF L M + N + +I
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C ++ S+L + + P++ ++TL+ L + + +LF +++ L +
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN +V+ GLCK G+ +A ++++ M + G +P+V Y+ +IDG G VD A
Sbjct: 280 -YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Score = 59.3 bits (142), Expect = 7e-07
Identities = 44/178 (24%), Positives = 81/178 (45%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A+++ RE+ +PS+ N LL +L K A FD+M G +L +
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ VE S L + + N+ I+ ++ GL GK +A + F K+ + L
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDD 8
P+ ++SG C+ G A+D+L+ M+ G + + Y+ ++ G + V +
Sbjct: 490 -HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 142 bits (359), Expect = 5e-32
Identities = 70/187 (37%), Positives = 110/187 (58%)
Frame = -3
Query: 565 DFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEV 386
+F +++C DDA LFR+M+ P PS +++KLL V ++ Y +F ++ I V
Sbjct: 46 EFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPV 105
Query: 385 NLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLF 206
+ +LS +N CC + +LGFS+L FK G N F TL++GL K +A LF
Sbjct: 106 DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLF 165
Query: 205 RKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
+K++ +C+P++ M TVM GLCK G ++ A DLL++M++ P+ Y+ VID C
Sbjct: 166 KKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCK 225
Query: 25 NGMVDDA 5
+GM+D A
Sbjct: 226 DGMLDGA 232
Score = 77.4 bits (189), Expect = 2e-12
Identities = 50/177 (28%), Positives = 85/177 (48%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A R+F MI +P + +Y L++ V+ ++ A LF ++ G++ ++ + S+ +
Sbjct: 337 ARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLR 396
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
+ E + G+ PNL TLL G G EA S F K L +
Sbjct: 397 GLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRRED 455
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
N + V++GLCKNG+ A + + G +P+V Y+A+I G C G++D+A
Sbjct: 456 TNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Score = 73.6 bits (179), Expect = 4e-11
Identities = 50/175 (28%), Positives = 86/175 (49%)
Frame = -3
Query: 526 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 347
LF EMI L+ P V +N ++ K + + A + M +G+E N + ++ M+ C
Sbjct: 270 LFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYC 329
Query: 346 HRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 167
R Q+ I S+ G EP++ + L+ G V K +A LFR+I L +P+
Sbjct: 330 LRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGL-KPSI 388
Query: 166 SMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
++ GL + G++ A+ MQ G PN+ + ++ G NG+V++AM
Sbjct: 389 VTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAM 443
Score = 63.9 bits (154), Expect = 3e-08
Identities = 45/178 (25%), Positives = 83/178 (46%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D A++LFRE+ +PS+ + LL ++ + A FD+M+ G NL +
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ VE S L + + N+ I+ ++ GL GK +A + F K+ + L
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGL 489
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDD 8
P+ ++SG C+ G A+D+L+ M+ G P+ + Y+ ++ G + V +
Sbjct: 490 -HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSE 546
>ref|XP_007207787.1| hypothetical protein PRUPE_ppa025792mg, partial [Prunus persica]
gi|462403429|gb|EMJ08986.1| hypothetical protein
PRUPE_ppa025792mg, partial [Prunus persica]
Length = 568
Score = 142 bits (358), Expect = 6e-32
Identities = 70/188 (37%), Positives = 113/188 (60%)
Frame = -3
Query: 565 DFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEV 386
D + +R + A +F EM+ + P PSV +N++L VKL+ Y V +++M GI
Sbjct: 45 DPTRVRNLEHAFNVFDEMLHMRPLPSVGRFNQILGQVVKLKHYSVVISFYNQMGLFGIGS 104
Query: 385 NLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLF 206
N+C+L+I +NC CH Q+ FS+LG LFK G+EPN+ F TL+ G + + +EA +F
Sbjct: 105 NVCTLTIVINCFCHLNQMGFSFSVLGQLFKSGFEPNVYTFNTLINGSLTENRVAEAAEIF 164
Query: 205 RKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
K++ C+P+ T++ G C+ G + A LL+ M++ NPN+ AY+ +ID LC
Sbjct: 165 NKMMKAGNCKPDVVTFGTLIKGFCRMGNNSAAIQLLRRMEEGACNPNLVAYNTIIDSLCK 224
Query: 25 NGMVDDAM 2
+ +V DA+
Sbjct: 225 DTLVVDAL 232
Score = 70.5 bits (171), Expect = 3e-10
Identities = 42/167 (25%), Positives = 78/167 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA +LF +M P V Y LL K ++ +A LF M + +++++ +I +
Sbjct: 390 DAHKLFSQMQGCGHLPDVQTYAVLLDGLCKTQQLPMAMKLFRVMEGKKLDIDIVIYNILI 449
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
C ++E I L G++PN+ + ++ G VG SEAE L + + C
Sbjct: 450 EGLCIAGKIESALDIFYGLSSKGHQPNVRTYNIMISGFCNVGLISEAEKLVGE-MEENGC 508
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVID 38
P+D T++ G+ + ++ A +Q M + GF+ + ++D
Sbjct: 509 SPDDCTYNTIIRGIINSNETSRAMVFIQQMVERGFSADASTMELIVD 555
Score = 68.9 bits (167), Expect = 9e-10
Identities = 48/180 (26%), Positives = 85/180 (47%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DDA+ LFREM P Y L+ KL + A LF +M+ G ++ + ++
Sbjct: 354 DDAMMLFREMSRKGMVPHTITYTTLMDGFCKLGRIRDAHKLFSQMQGCGHLPDVQTYAVL 413
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C +Q+ + + + + ++ I+ L++GL + GK A +F L+ K
Sbjct: 414 LDGLCKTQQLPMAMKLFRVMEGKKLDIDIVIYNILIEGLCIAGKIESALDIFYG-LSSKG 472
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
QPN ++SG C G A L+ M++ G +P+ Y+ +I G+ N+ AM
Sbjct: 473 HQPNVRTYNIMISGFCNVGLISEAEKLVGEMEENGCSPDDCTYNTIIRGIINSNETSRAM 532
Score = 67.4 bits (163), Expect = 3e-09
Identities = 47/179 (26%), Positives = 81/179 (45%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A RL EM++ + P V +N + A + + M R IE N + + M
Sbjct: 250 EATRLLNEMVSRNIFPDVQTFNVFVDTLCMEGMVGEAQTVVEMMIERDIEPNAVTYNSLM 309
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C R +++ + + N+ ++ L+ G +A LFR+ ++ K
Sbjct: 310 DGYCLRGEMDKAKKVFELMLCKDSMTNVRSYSILINGYCKCKNIDDAMMLFRE-MSRKGM 368
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ T+M G CK G+ R+A L MQ G P+V+ Y+ ++DGLC + AM
Sbjct: 369 VPHTITYTTLMDGFCKLGRIRDAHKLFSQMQGCGHLPDVQTYAVLLDGLCKTQQLPMAM 427
>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 137 bits (345), Expect = 2e-30
Identities = 68/185 (36%), Positives = 110/185 (59%)
Frame = -3
Query: 556 SIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLC 377
+++C DDAV LFR+M+ P PSV ++KL + ++ Y LF +M+ GI +N
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLSMKHYSAVVSLFREMQKLGIPINDF 111
Query: 376 SLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKI 197
LSI +N C +V+ FS+L K G ++ F TL++G+ + K +A +LF+K+
Sbjct: 112 ILSIVINSYCSMHRVDCAFSVLAIYLKKGIPFDVVTFTTLIRGIFVESKVKDAVNLFKKL 171
Query: 196 LTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGM 17
+ K+C+PN+ M TVMSGL K G + LL++M++ P++ Y+ VID LC +
Sbjct: 172 VREKICEPNEVMYATVMSGLSKRGHTEKTVSLLRLMEQGNTKPDIFNYNIVIDSLCKDRN 231
Query: 16 VDDAM 2
+DDA+
Sbjct: 232 LDDAI 236
Score = 79.7 bits (195), Expect = 5e-13
Identities = 48/179 (26%), Positives = 92/179 (51%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + R M S +P + YN ++ + A +FD M + IE + S +I
Sbjct: 303 EDAEEVMRHMNEKSVEPDILTYNVIMDGYCLRGQMDRARRIFDFMIDKCIEPGIISYNIL 362
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N C +++++ + + + G +P++ F T+L+GL VG+ +A+ F ++L++
Sbjct: 363 INGYCKKKKLDEAMQLFREISRRGSKPDIVTFNTILQGLFEVGRIGDAKKFFAEMLSIGH 422
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ T++ G K G LL +++ N +++ Y+ VI+GLC NG +D A
Sbjct: 423 V-PDLYTHCTLLKGYFKYGLVEEGVSLLNELERKRENADIEFYNVVINGLCKNGKLDKA 480
Score = 74.7 bits (182), Expect = 2e-11
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF++++ +P+ Y ++S K + L M + ++ + +I
Sbjct: 163 DAVNLFKKLVREKICEPNEVMYATVMSGLSKRGHTEKTVSLLRLMEQGNTKPDIFNYNIV 222
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C R ++ S+L + K G P++ F +L+ GL G+ + +LF ++L L +
Sbjct: 223 IDSLCKDRNLDDAISLLNEMNKKGICPDIFTFNSLIDGLCKFGQWEKVRTLFSEMLNLNI 282
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ V+ GLCK G+ +A ++++ M + P++ Y+ ++DG C G +D A
Sbjct: 283 -YPDVYTFSMVIDGLCKEGKVEDAEEVMRHMNEKSVEPDILTYNVIMDGYCLRGQMDRA 340
Score = 55.5 bits (132), Expect = 1e-05
Identities = 39/175 (22%), Positives = 82/175 (46%)
Frame = -3
Query: 526 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 347
LF EM+ L+ P V ++ ++ K + + A + M + +E ++ + ++ M+ C
Sbjct: 273 LFSEMLNLNIYPDVYTFSMVIDGLCKEGKVEDAEEVMRHMNEKSVEPDILTYNVIMDGYC 332
Query: 346 HRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 167
R Q++ I + EP + + L+ G K EA LFR+I + + +P+
Sbjct: 333 LRGQMDRARRIFDFMIDKCIEPGIISYNILINGYCKKKKLDEAMQLFREI-SRRGSKPDI 391
Query: 166 SMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
T++ GL + G+ +A+ M G P++ + ++ G G+V++ +
Sbjct: 392 VTFNTILQGLFEVGRIGDAKKFFAEMLSIGHVPDLYTHCTLLKGYFKYGLVEEGV 446
>ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 701
Score = 137 bits (345), Expect = 2e-30
Identities = 72/180 (40%), Positives = 102/180 (56%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D A+ +F +M+ P PSV +N++L+ VKL+ Y LF +MR R I N+ +L+I
Sbjct: 166 DSALNMFHQMLHSRPLPSVVLFNQILTRLVKLKHYSAVIPLFRQMRLRRIVPNVYTLNIL 225
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
MNC CH + G SI FK G EP + F TL+ G VL + EA +F K+L
Sbjct: 226 MNCYCHLNAMGFGLSIFAQFFKWGLEPIVITFNTLIHGFVLNNQGDEATRVFTKMLEEGD 285
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
C+PN T++ G CK G R A LL+ M++ G PN+ +YS VID LC +D+A+
Sbjct: 286 CEPNVVTFSTLIKGFCKTGDCRAAIQLLRKMEEIGCKPNIVSYSTVIDSLCKEASIDEAL 345
Score = 80.9 bits (198), Expect = 2e-13
Identities = 51/164 (31%), Positives = 78/164 (47%)
Frame = -3
Query: 496 QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHRRQVELGFS 317
+P Y+ L+ E A +FD M +G VN+ S SI +N C ++V+
Sbjct: 427 EPDTVTYSSLMDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKANE 486
Query: 316 ILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL 137
I + ++ P+ + TL+ G G+ EAE LF ++ PN ++ GL
Sbjct: 487 IFKEMRRMELVPDTITYTTLIDGFCKAGRIQEAEKLFSEMQGCGRL-PNVQTYAVLLDGL 545
Query: 136 CKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
CKN Q A +LL+ M+ N+ YS VIDGLC G ++ A
Sbjct: 546 CKNQQLSTAIELLKEMEADKLEVNIVVYSVVIDGLCKAGKMESA 589
Score = 76.3 bits (186), Expect = 5e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
++A RL +M++ S P+V ++ L+ K A + + M R IE + + S
Sbjct: 377 EEATRLLDQMLSKSVSPNVLTFSVLVDTLCKAGMVVKAKNVVEMMMQRHIEPDTVTYSSL 436
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
M+ C R +++ + + G N+ + L+ G V + +A +F+++ ++L
Sbjct: 437 MDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKANEIFKEMRRMEL 496
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ T++ G CK G+ + A L MQ G PNV+ Y+ ++DGLC N + A+
Sbjct: 497 V-PDTITYTTLIDGFCKAGRIQEAEKLFSEMQGCGRLPNVQTYAVLLDGLCKNQQLSTAI 555
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/99 (34%), Positives = 54/99 (54%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
+ ++F E++ + P P V +++LLS +LE Y + LF +M GI + +L I N
Sbjct: 51 SAKVFHELLHMRPLPPVACFSQLLSQLARLEHYDLVIPLFKQMGLIGIPPDASTLDILAN 110
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVL 239
C CH + EL F +L FKLG +P+ F L+ +L
Sbjct: 111 CYCHLNRAELSFPVLALFFKLGLQPHFTTFTALIHAFLL 149
Score = 63.5 bits (153), Expect = 4e-08
Identities = 42/177 (23%), Positives = 81/177 (45%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A++L R+M + +P++ +Y+ ++ K A L +M RGI N+ + + ++
Sbjct: 309 AIQLLRKMEEIGCKPNIVSYSTVIDSLCKEASIDEALKLLSEMSSRGITPNVVTYTSLID 368
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C E +L + PN+ F+ L+ L G +A+++ ++ + +
Sbjct: 369 GLCKLGHWEEATRLLDQMLSKSVSPNVLTFSVLVDTLCKAGMVVKAKNVVEMMMQRHI-E 427
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ ++M G C G+ +AR + M G NV + S +I+G C VD A
Sbjct: 428 PDTVTYSSLMDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKA 484
Score = 60.8 bits (146), Expect = 2e-07
Identities = 47/179 (26%), Positives = 83/179 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A +LF EM P+V Y LL K ++ A L +M +EVN+ S+ +
Sbjct: 518 EAEKLFSEMQGCGRLPNVQTYAVLLDGLCKNQQLSTAIELLKEMEADKLEVNIVVYSVVI 577
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C ++E + L G + ++ + +++GL G +EAE L R+ + K C
Sbjct: 578 DGLCKAGKMESARDLFCGLSSKGIQHDVITYNIMIQGLCHHGFLAEAEKLLRE-MGRKGC 636
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ T++ GL N + A +L+ M GF+ + +I GL + +V A+
Sbjct: 637 FPDGFTYNTIIRGLLNNNLTSWAVELIHEMVDWGFSADASTLE-LIAGLLSKDIVHPAL 694
>ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
cacao] gi|508717852|gb|EOY09749.1| ATP binding,nucleic
acid binding,helicases, putative [Theobroma cacao]
Length = 626
Score = 136 bits (342), Expect = 4e-30
Identities = 69/179 (38%), Positives = 113/179 (63%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A+ LF MI P+PS+ +++LL V++++Y A L +M GI+ N+ +L+I +
Sbjct: 83 EALTLFNRMIHSHPRPSIIEFSRLLGAVVRIKDYVTAVSLIRQMELLGIQHNVYTLTILI 142
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
NC CH + V+ GFS+LG +FKLG +PN+ F+TL+ GL +V K + A LF ++ +
Sbjct: 143 NCFCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMVR-EGY 201
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
QPN T+++GLCK G + A LL++M++ G PN+ Y+ +ID LC + V +A+
Sbjct: 202 QPNLISYSTIVNGLCKIGDTSGAIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEAL 260
Score = 77.0 bits (188), Expect = 3e-12
Identities = 50/179 (27%), Positives = 86/179 (48%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+ L +EM+A + P+V N LL K A + KM G+ ++ + + M
Sbjct: 293 EVTSLLKEMVANNVMPNVVTCNILLDALCKEGLVSEAHDVVKKMSQEGVGSDIVTYNTLM 352
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ CC R ++ I L G PN+ + L G + EA +LF +I + K
Sbjct: 353 DSCCLRSEIYEARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEAMNLFHEI-SDKGF 411
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ +++G+C+ G+ A++L + M G P+ YSA++DGLC +G V +A+
Sbjct: 412 IPDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSALLDGLCKHGHVHEAL 470
Score = 75.9 bits (185), Expect = 7e-12
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = -3
Query: 487 VPAYNKLL-SCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHRRQVELGFSIL 311
+ YN L+ SC ++ E Y+ A +FD + RG N+ S + + C ++V+ ++
Sbjct: 345 IVTYNTLMDSCCLRSEIYE-ARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEAMNLF 403
Query: 310 GSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGLCK 131
+ G+ P++ + L+ G+ +G+ S A+ LF++ ++ P+ ++ GLCK
Sbjct: 404 HEISDKGFIPDVVTYTILINGMCEIGRLSAAQELFKE-MSANGQIPDQMTYSALLDGLCK 462
Query: 130 NGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLC 29
+G A + Q M +G P++ YS ++DGLC
Sbjct: 463 HGHVHEALEFFQAMHNSGLEPSIFHYSILLDGLC 496
Score = 67.8 bits (164), Expect = 2e-09
Identities = 47/186 (25%), Positives = 81/186 (43%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
F ++C D L +M L QP+V ++ L++ + + A LF+ M G + N
Sbjct: 145 FCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMVREGYQPN 204
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
L S S +N C +L + + G PN+ + T++ L +EA L
Sbjct: 205 LISYSTIVNGLCKIGDTSGAIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEALKLLS 264
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+ + K N +++ +C GQ + LL+ M PNV + ++D LC
Sbjct: 265 E-MRGKGIPSNIVTYSSLIHAMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLDALCKE 323
Query: 22 GMVDDA 5
G+V +A
Sbjct: 324 GLVSEA 329
Score = 66.2 bits (160), Expect = 6e-09
Identities = 47/178 (26%), Positives = 79/178 (44%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A+RL R M P++ Y ++ K E A L +MR +GI N+ + S ++
Sbjct: 224 AIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEALKLLSEMRGKGIPSNIVTYSSLIH 283
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C+ Q + S+L + PN+ LL L G SEA + +K ++ +
Sbjct: 284 AMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLDALCKEGLVSEAHDVVKK-MSQEGVG 342
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+ T+M C + AR + ++ G PN+ +Y+A+ G C VD+AM
Sbjct: 343 SDIVTYNTLMDSCCLRSEIYEARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEAM 400
Score = 64.7 bits (156), Expect = 2e-08
Identities = 44/168 (26%), Positives = 73/168 (43%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A LF+EM A P Y+ LL K A F M + G+E ++ SI ++
Sbjct: 434 AQELFKEMSANGQIPDQMTYSALLDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLD 493
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C R+ +L + +F PN+ ++ ++K L G +EA+ LFRK + C
Sbjct: 494 GLCQVREFKLARQLFRQIFAKALHPNIYVYTIMIKALFEEGLPNEAQELFRK-MEEGGCL 552
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGL 32
N T++ G +N + +L M GF+ + ++D L
Sbjct: 553 ANSCSYNTMVQGFLQNNDMSSVMQILHEMVDKGFSLDAPMAVMLVDFL 600
Score = 60.5 bits (145), Expect = 3e-07
Identities = 44/180 (24%), Positives = 78/180 (43%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A+ LF E+ P V Y L++ ++ A LF +M G + + S
Sbjct: 397 DEAMNLFHEISDKGFIPDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSAL 456
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C V ++ G EP++ ++ LL GL V + A LFR+I K
Sbjct: 457 LDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLDGLCQVREFKLARQLFRQIFA-KA 515
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
PN + ++ L + G A++L + M++ G N +Y+ ++ G N + M
Sbjct: 516 LHPNIYVYTIMIKALFEEGLPNEAQELFRKMEEGGCLANSCSYNTMVQGFLQNNDMSSVM 575
>ref|XP_004503287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cicer arietinum]
Length = 565
Score = 136 bits (342), Expect = 4e-30
Identities = 69/187 (36%), Positives = 111/187 (59%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
F R DDAV F M+ P+P ++K+L V++ Y A LF++++ RGI +
Sbjct: 43 FCGFRNVDDAVSCFNRMVRSFPRPPTCEFDKVLGAIVRMGHYPTAISLFNQLQLRGISPS 102
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ + SI +NC CH+ + FS+LG++ K GY+PN+ F TL+ G + G +A + ++
Sbjct: 103 IATFSILINCYCHQSHMNFAFSLLGTILKTGYQPNMVTFNTLINGFCINGLIFKALNFYQ 162
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+L+ ++ +++GLCKNGQ+R A L+Q M + PN+ YSAVIDGLC +
Sbjct: 163 DLLSQGYLF-DEFTYGILINGLCKNGQTRAALHLIQEMGERSVLPNLVMYSAVIDGLCKD 221
Query: 22 GMVDDAM 2
G+V DA+
Sbjct: 222 GLVSDAL 228
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/180 (25%), Positives = 87/180 (48%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
++A LF M++ +P V Y+ L++ K E A LF ++ + + N+ + +
Sbjct: 330 NEAKELFNRMVSRGLEPDVLNYSVLINGYCKAEMLDEAMVLFKEICQQNLVPNIATYNSL 389
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N C+ ++ +L + G P++ + LL L EA SL+R+I+ +
Sbjct: 390 INGLCNSERISHVQELLDEMRDSGQPPDVVTYNILLDALCKTRPFDEAISLYRQIV--QG 447
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ ++ LCK + + A D LQ + PNV+ Y+ +I+ LC +G D+A+
Sbjct: 448 IWPDFYTNNVIVDNLCKGEKLKIAEDALQHLLMHCCPPNVQTYTIMINALCKDGSFDEAI 507
Score = 63.5 bits (153), Expect = 4e-08
Identities = 42/158 (26%), Positives = 74/158 (46%)
Frame = -3
Query: 478 YNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHRRQVELGFSILGSLF 299
Y L++ K + + A +L +M R + NL S ++ C V + L
Sbjct: 176 YGILINGLCKNGQTRAALHLIQEMGERSVLPNLVMYSAVIDGLCKDGLVSDALGLCSKLG 235
Query: 298 KLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGLCKNGQS 119
G ++ + +L+ G VG+ EA L K++ K+ P+D ++ LCK G+
Sbjct: 236 DRGISLDVVTYNSLIHGCCSVGRWQEATQLLTKMVREKV-DPDDYTFNILIDALCKEGRI 294
Query: 118 RNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
A+ +L +M K G P+V Y+A++ G C V++A
Sbjct: 295 LEAQGVLVMMMKRGEKPDVVTYNAIMVGYCLRKNVNEA 332
Score = 63.2 bits (152), Expect = 5e-08
Identities = 43/179 (24%), Positives = 83/179 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A +L +M+ P +N L+ K A + M RG + ++ + + M
Sbjct: 261 EATQLLTKMVREKVDPDDYTFNILIDALCKEGRILEAQGVLVMMMKRGEKPDVVTYNAIM 320
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
C R+ V + + G EP++ ++ L+ G EA LF++I L
Sbjct: 321 VGYCLRKNVNEAKELFNRMVSRGLEPDVLNYSVLINGYCKAEMLDEAMVLFKEICQQNLV 380
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
PN + ++++GLC + + + ++LL M+ +G P+V Y+ ++D LC D+A+
Sbjct: 381 -PNIATYNSLINGLCNSERISHVQELLDEMRDSGQPPDVVTYNILLDALCKTRPFDEAI 438
Score = 59.7 bits (143), Expect = 5e-07
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A+ L +EM S P++ Y+ ++ K A L K+ RGI +++ + + ++
Sbjct: 192 ALHLIQEMGERSVLPNLVMYSAVIDGLCKDGLVSDALGLCSKLGDRGISLDVVTYNSLIH 251
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
CC + + +L + + +P+ F L+ L G+ EA+ + ++ +K +
Sbjct: 252 GCCSVGRWQEATQLLTKMVREKVDPDDYTFNILIDALCKEGRILEAQGVL--VMMMKRGE 309
Query: 175 PNDSMIL-TVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
D + +M G C A++L M G P+V YS +I+G C M+D+AM
Sbjct: 310 KPDVVTYNAIMVGYCLRKNVNEAKELFNRMVSRGLEPDVLNYSVLINGYCKAEMLDEAM 368
Score = 55.5 bits (132), Expect = 1e-05
Identities = 42/179 (23%), Positives = 75/179 (41%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A+ LF+E+ + P++ YN L++ E L D+MR G ++ + +I
Sbjct: 365 DEAMVLFKEICQQNLVPNIATYNSLINGLCNSERISHVQELLDEMRDSGQPPDVVTYNIL 424
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C R + S+ + + G P+ ++ L K AE + +L +
Sbjct: 425 LDALCKTRPFDEAISLYRQIVQ-GIWPDFYTNNVIVDNLCKGEKLKIAEDALQHLL-MHC 482
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
C PN +++ LCK+G A LL M P+ + +I L D A
Sbjct: 483 CPPNVQTYTIMINALCKDGSFDEAIALLVKMDDNDCPPDAVTFETIIGALLEKNESDKA 541
>ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Populus trichocarpa]
gi|550337278|gb|EEE93224.2| hypothetical protein
POPTR_0006s28610g [Populus trichocarpa]
Length = 596
Score = 135 bits (340), Expect = 8e-30
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 1/187 (0%)
Frame = -3
Query: 559 SSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEY-KVAFYLFDKMRHRGIEVN 383
SS R DDA+ F M+ P P + + KLLS VK+ +Y V L +M G+ N
Sbjct: 44 SSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPN 103
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ +LSI MNC C ++V+LGFS+L + KLG +P + F TL+ GL VG+ ++A LF
Sbjct: 104 IYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFD 163
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
++ K CQP+ T+++GLCK G++ A LL+ M++ G PN+ YS +ID LC +
Sbjct: 164 DMVA-KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 222
Query: 22 GMVDDAM 2
+V++A+
Sbjct: 223 RLVNEAL 229
Score = 86.3 bits (212), Expect = 5e-15
Identities = 51/179 (28%), Positives = 95/179 (53%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A +LF MI +P++ +YN L++ K + A LF++M H+G+ N S + +
Sbjct: 332 EARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 391
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C ++ + ++ G P+L ++ LL G G +A LFR + + L
Sbjct: 392 HGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL- 450
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+PN M ++ +CK+G ++AR L + G P+V+ Y+ +I+GLC G++D+A+
Sbjct: 451 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 509
Score = 79.0 bits (193), Expect = 8e-13
Identities = 47/167 (28%), Positives = 81/167 (48%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
AV LF +M+A QP V YN +++ K+ E A L KM G + N+ + S ++
Sbjct: 158 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 217
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C R V I + G P++ + +L++GL + EA +L ++ +L +
Sbjct: 218 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI-M 276
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG 35
P+ ++ CK G+ A +L+ M + G PNV YS+++ G
Sbjct: 277 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 323
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/187 (22%), Positives = 88/187 (47%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
F ++ D + ++I L QP++ + L++ K+ E+ A LFD M +G + +
Sbjct: 114 FCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPD 173
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ + + +N C + +L + + G +PN+ ++TL+ L +EA +F
Sbjct: 174 VYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF- 232
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+ K P+ +++ GLCK + + A LL M P++ ++ ++D C
Sbjct: 233 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 292
Query: 22 GMVDDAM 2
G V +A+
Sbjct: 293 GKVSEAL 299
Score = 70.9 bits (172), Expect = 2e-10
Identities = 47/170 (27%), Positives = 85/170 (50%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A++LF EMI P+ +YN L+ +L + + A LF M G +L + SI
Sbjct: 366 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 425
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C + + F + ++ +PNL ++ L+ + G +A LF ++ L
Sbjct: 426 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 485
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGL 32
QP+ + T+++GLCK G A + + M+ G P+ +Y+ +I GL
Sbjct: 486 -QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 534
>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 655
Score = 134 bits (338), Expect = 1e-29
Identities = 64/189 (33%), Positives = 110/189 (58%)
Frame = -3
Query: 568 IDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIE 389
++F ++C DDAV LF +M+ + P PSV ++KL + ++ Y LF +M+ GI+
Sbjct: 108 LNFEKLKCLDDAVNLFNQMVRMKPLPSVVDFSKLFKNMISMKHYSAVLSLFREMQKLGIQ 167
Query: 388 VNLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESL 209
++ L+ +N C + + GF +L K G ++ F TL++GL K +A L
Sbjct: 168 IDGVILTSVINSYCMMHRADCGFLVLPIYLKNGVSFDVVTFTTLIRGLFAENKVKDAVEL 227
Query: 208 FRKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLC 29
F+K++ K+C+P++ M TVM+GL K G ++ LL++M++ P + Y+ VID LC
Sbjct: 228 FKKLVREKICEPDEVMYATVMNGLSKRGHTQKTLSLLRLMEQGNTKPKIINYNIVIDSLC 287
Query: 28 NNGMVDDAM 2
+G +DDA+
Sbjct: 288 KDGNLDDAI 296
Score = 82.4 bits (202), Expect = 8e-14
Identities = 48/179 (26%), Positives = 94/179 (52%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + ++M+ P+V YN ++ + A +FD + +GIE + S +I
Sbjct: 363 EDAEEVMKQMVEKDVDPNVITYNVIMDGYCLRGQPDRARRIFDILIDKGIEPTIFSYTIL 422
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N C ++++ + + + G +PN+ + T+L+GL VG+ A+ LF ++++
Sbjct: 423 INGYCKKKKIAKAMQLFCEISQKGLKPNIVTYNTILQGLFEVGRIGVAKQLFVEMVSTGP 482
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN S T++ G K G A L +++ N ++ +Y+ +I+GLC NG +D+A
Sbjct: 483 V-PNLSTHNTLLDGYFKYGLVEEAMSLFNKLERKKKNIDIGSYNIIINGLCKNGKLDEA 540
Score = 66.2 bits (160), Expect = 6e-09
Identities = 48/175 (27%), Positives = 86/175 (49%)
Frame = -3
Query: 526 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 347
LF EM+ L+ V +N L+ K + + A + +M + ++ N+ + ++ M+ C
Sbjct: 333 LFYEMVNLNIYLDVRTFNILIDGLCKDGKVEDAEEVMKQMVEKDVDPNVITYNVIMDGYC 392
Query: 346 HRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 167
R Q + I L G EP + + L+ G K ++A LF +I + K +PN
Sbjct: 393 LRGQPDRARRIFDILIDKGIEPTIFSYTILINGYCKKKKIAKAMQLFCEI-SQKGLKPNI 451
Query: 166 SMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
T++ GL + G+ A+ L M TG PN+ ++ ++DG G+V++AM
Sbjct: 452 VTYNTILQGLFEVGRIGVAKQLFVEMVSTGPVPNLSTHNTLLDGYFKYGLVEEAM 506
Score = 65.5 bits (158), Expect = 1e-08
Identities = 42/176 (23%), Positives = 80/176 (45%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DDA+ L EM P V YN ++ K ++ LF +M + I +++ + +I
Sbjct: 293 DDAINLLNEMKQKDICPDVVTYNSIIDSLCKFGKWGKVKTLFYEMVNLNIYLDVRTFNIL 352
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C +VE ++ + + +PN+ + ++ G L G+ A +F IL K
Sbjct: 353 IDGLCKDGKVEDAEEVMKQMVEKDVDPNVITYNVIMDGYCLRGQPDRARRIF-DILIDKG 411
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMV 14
+P +++G CK + A L + + G PN+ Y+ ++ GL G +
Sbjct: 412 IEPTIFSYTILINGYCKKKKIAKAMQLFCEISQKGLKPNIVTYNTILQGLFEVGRI 467
Score = 63.9 bits (154), Expect = 3e-08
Identities = 42/178 (23%), Positives = 82/178 (46%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A +LF EM++ P P++ +N LL K + A LF+K+ + +++ S +I +N
Sbjct: 470 AKQLFVEMVSTGPVPNLSTHNTLLDGYFKYGLVEEAMSLFNKLERKKKNIDIGSYNIIIN 529
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C +++ F+I L +G N+ + T++ G L G EA+ + RK + C
Sbjct: 530 GLCKNGKLDEAFAIFQKLSSMGLILNVRTYNTMITGFCLQGLLDEAKDMLRK-MEGDNCL 588
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
PN+ ++ G + + + M TGF+ + ++ + N + D +
Sbjct: 589 PNNVTYNVIVQGYLRCRKINEMVTFMNEMTGTGFSFDATTAKLLVKEISENPSILDML 646
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/179 (20%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF++++ +P Y +++ K + L M + + + +I
Sbjct: 223 DAVELFKKLVREKICEPDEVMYATVMNGLSKRGHTQKTLSLLRLMEQGNTKPKIINYNIV 282
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C ++ ++L + + P++ + +++ L GK + ++LF +++ L +
Sbjct: 283 IDSLCKDGNLDDAINLLNEMKQKDICPDVVTYNSIIDSLCKFGKWGKVKTLFYEMVNLNI 342
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
+ + + GLCK+G+ +A ++++ M + +PNV Y+ ++DG C G D A
Sbjct: 343 YLDVRTFNILI-DGLCKDGKVEDAEEVMKQMVEKDVDPNVITYNVIMDGYCLRGQPDRA 400
>ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Populus trichocarpa]
gi|550337275|gb|ERP59920.1| hypothetical protein
POPTR_0006s28580g [Populus trichocarpa]
Length = 567
Score = 134 bits (338), Expect = 1e-29
Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
Frame = -3
Query: 559 SSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEY-KVAFYLFDKMRHRGIEVN 383
SS R DDA+ F MI P P + + KLLS VK+ +Y V L +M G+ N
Sbjct: 44 SSFRNIDDALASFNHMIHRKPLPCIIQFTKLLSAIVKMGQYYDVVISLSKQMGLAGLSSN 103
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+L I MNC C ++V+LGFS+L + KLG +P + F TL+ GL VG+ ++A LF
Sbjct: 104 TYTLHILMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFNTLINGLCKVGEFAQAVELFD 163
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
++ + CQPN T+++GLCK G++ A L + M++ G P+V YS +ID LC +
Sbjct: 164 DMVA-RGCQPNVYTYTTIINGLCKTGEAAEAAGLFKKMEEAGCQPDVVTYSTLIDSLCKD 222
Query: 22 GMVDDAM 2
+V++A+
Sbjct: 223 RLVNEAL 229
Score = 89.0 bits (219), Expect = 8e-16
Identities = 56/187 (29%), Positives = 96/187 (51%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
+SS +A +LF MI +P V +YN L++ K + A LF++M H+G+ N
Sbjct: 324 YSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGYCKAKRIDEAKQLFNEMIHQGLTPN 383
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ + ++ C +V + ++ G PNL ++ LL G G +A LFR
Sbjct: 384 KVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLPNLRTYSILLDGFCKQGYLGKAFRLFR 443
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+ + L +PN M ++ +CK+G ++AR L + G PNV+ Y+ +I GLC
Sbjct: 444 AMQSTHL-KPNPVMYTILVHAMCKSGNLKDARKLFSELFVQGLQPNVQIYTTIIFGLCKE 502
Query: 22 GMVDDAM 2
G++D+A+
Sbjct: 503 GLLDEAL 509
Score = 73.2 bits (178), Expect = 5e-11
Identities = 47/177 (26%), Positives = 85/177 (48%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
AV LF +M+A QP+V Y +++ K E A LF KM G + ++ + S ++
Sbjct: 158 AVELFDDMVARGCQPNVYTYTTIINGLCKTGEAAEAAGLFKKMEEAGCQPDVVTYSTLID 217
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C R V I + G P++ + +L++GL + EA +L ++ +L +
Sbjct: 218 SLCKDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI-M 276
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ ++ CK G+ A +L+ M + G PNV Y++++ G + V +A
Sbjct: 277 PDIVTFNVLVDTFCKEGKVLEALGVLKTMTEMGVEPNVVTYNSLMYGYSSCTQVVEA 333
Score = 70.9 bits (172), Expect = 2e-10
Identities = 48/169 (28%), Positives = 79/169 (46%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A +LF EMI P+ YN L+ +L + A LF MR G NL + SI
Sbjct: 366 DEAKQLFNEMIHQGLTPNKVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLPNLRTYSIL 425
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C + + F + ++ +PN ++ L+ + G +A LF ++ L
Sbjct: 426 LDGFCKQGYLGKAFRLFRAMQSTHLKPNPVMYTILVHAMCKSGNLKDARKLFSELFVQGL 485
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG 35
QPN + T++ GLCK G A + + M++ G P+ Y +I G
Sbjct: 486 -QPNVQIYTTIIFGLCKEGLLDEALEAFRNMEEDGCPPDEICYRVIIRG 533
Score = 70.1 bits (170), Expect = 4e-10
Identities = 46/179 (25%), Positives = 79/179 (44%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
F ++ D + ++I L QP++ +N L++ K+ E+ A LFD M RG
Sbjct: 114 FCQLQRVDLGFSVLAKVIKLGLQPTIVTFNTLINGLCKVGEFAQAVELFDDMVARGC--- 170
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+PN+ + T++ GL G+ +EA LF+
Sbjct: 171 --------------------------------QPNVYTYTTIINGLCKTGEAAEAAGLFK 198
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
K+ CQP+ T++ LCK+ A D+ M+ G +P++ Y+++I GLCN
Sbjct: 199 KMEEAG-CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCN 256
>ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508717935|gb|EOY09832.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 747
Score = 134 bits (338), Expect = 1e-29
Identities = 68/179 (37%), Positives = 111/179 (62%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA+ LF + SP+P + +NKLL V ++ Y + L +M GI + +L+I +
Sbjct: 73 DALTLFNLLAHASPRPCIVEFNKLLGAIVGMKHYAIVVSLCKQMELLGIIHDAYTLNILI 132
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
NC CH R+V+ GFS+LG + KLGY+P+L F+TL+KG + K ++A LF + + L
Sbjct: 133 NCFCHLRRVDFGFSVLGKMLKLGYKPHLVTFSTLVKGFCMEHKVAQAARLFNE-MVLTGY 191
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
QP+ + +++G CK G + A +L+ M++ GF P++ A+SAVID LC N ++ +A+
Sbjct: 192 QPDLYIYTIIVNGFCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVIDSLCKNKLITEAL 250
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/180 (30%), Positives = 96/180 (53%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DDA+RLF EM + +P+V YN L+ K + A +F+ M GI+ N+ + S
Sbjct: 282 DDAMRLFNEMDCKNLKPNVVTYNILVDALCKEGKVSEALGIFEIMTRSGIQPNVVTYSEL 341
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N R +++ + S+ G EPN+ + ++ G + EA LF + +T K
Sbjct: 342 INGYRLRNEMDEARKVFDSMLTCGCEPNVFSYNIMINGYCKTNRIDEALKLFHE-MTQKG 400
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ + T+MSG+ + G+ +A++L + M G PN YS ++DG+C +G +D+A+
Sbjct: 401 PTPDIATYTTLMSGMFQVGRLLDAQELFEDMCSCGQVPNSMTYSVLLDGVCKHGRIDEAL 460
Score = 75.5 bits (184), Expect = 9e-12
Identities = 42/177 (23%), Positives = 86/177 (48%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A RLF EM+ QP + Y +++ K+ + A + KM RG + ++ + S ++
Sbjct: 179 AARLFNEMVLTGYQPDLYIYTIIVNGFCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVID 238
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C + + + + G + ++ +++L++ + G+ +A LF + + K +
Sbjct: 239 SLCKNKLITEALDLASEMKGKGIQADVVTYSSLIRAMCSSGRWDDAMRLFNE-MDCKNLK 297
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN ++ LCK G+ A + ++M ++G PNV YS +I+G +D+A
Sbjct: 298 PNVVTYNILVDALCKEGKVSEALGIFEIMTRSGIQPNVVTYSELINGYRLRNEMDEA 354
Score = 73.6 bits (179), Expect = 4e-11
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A+ +F M QP+V Y++L++ E A +FD M G E N+ S +I +
Sbjct: 318 EALGIFEIMTRSGIQPNVVTYSELINGYRLRNEMDEARKVFDSMLTCGCEPNVFSYNIMI 377
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
N C +++ + + + G P++ + TL+ G+ VG+ +A+ LF + +
Sbjct: 378 NGYCKTNRIDEALKLFHEMTQKGPTPDIATYTTLMSGMFQVGRLLDAQELFEDMCSCGQV 437
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQK---------------------------- 83
PN ++ G+CK+G+ A L Q MQ
Sbjct: 438 -PNSMTYSVLLDGVCKHGRIDEALRLFQAMQNSGTEPYIVHYNILIDGMIEAGRHKVAWE 496
Query: 82 -------TGFNPNVKAYSAVIDGLCNNGMVDDA 5
TG P + Y+ +I GLCN G + A
Sbjct: 497 LFSNIFVTGLKPTLPTYNIMIKGLCNKGFPEKA 529
Score = 70.9 bits (172), Expect = 2e-10
Identities = 47/187 (25%), Positives = 86/187 (45%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
F I AVR+ R+M QP + A++ ++ K + A L +M+ +GI+ +
Sbjct: 205 FCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVIDSLCKNKLITEALDLASEMKGKGIQAD 264
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ + S + C + + + + +PN+ + L+ L GK SEA +F
Sbjct: 265 VVTYSSLIRAMCSSGRWDDAMRLFNEMDCKNLKPNVVTYNILVDALCKEGKVSEALGIF- 323
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+I+T QPN +++G + AR + M G PNV +Y+ +I+G C
Sbjct: 324 EIMTRSGIQPNVVTYSELINGYRLRNEMDEARKVFDSMLTCGCEPNVFSYNIMINGYCKT 383
Query: 22 GMVDDAM 2
+D+A+
Sbjct: 384 NRIDEAL 390
Score = 66.6 bits (161), Expect = 4e-09
Identities = 44/173 (25%), Positives = 77/173 (44%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA LF +M + P+ Y+ LL K A LF M++ G E + +I +
Sbjct: 423 DAQELFEDMCSCGQVPNSMTYSVLLDGVCKHGRIDEALRLFQAMQNSGTEPYIVHYNILI 482
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ + ++ + + ++F G +P LP + ++KGL G +A LFRK + + C
Sbjct: 483 DGMIEAGRHKVAWELFSNIFVTGLKPTLPTYNIMIKGLCNKGFPEKAYDLFRK-MEVDDC 541
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNG 20
PN + G ++ A +L M GF+ + + ++D L NG
Sbjct: 542 LPNSISYNITIRGFLQSNDMLRAMQILHEMASKGFSTDASTANMLVDLLSVNG 594
Score = 65.1 bits (157), Expect = 1e-08
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A++LF EM P P + Y L+S ++ A LF+ M G N + S+
Sbjct: 387 DEALKLFHEMTQKGPTPDIATYTTLMSGMFQVGRLLDAQELFEDMCSCGQVPNSMTYSVL 446
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C +++ + ++ G EP + + L+ G++ G+ A LF I L
Sbjct: 447 LDGVCKHGRIDEALRLFQAMQNSGTEPYIVHYNILIDGMIEAGRHKVAWELFSNIFVTGL 506
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG-LCNNGMV 14
+P ++ GLC G A DL + M+ PN +Y+ I G L +N M+
Sbjct: 507 -KPTLPTYNIMIKGLCNKGFPEKAYDLFRKMEVDDCLPNSISYNITIRGFLQSNDML 562
>ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317566|gb|EFH47988.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 504
Score = 134 bits (338), Expect = 1e-29
Identities = 68/179 (37%), Positives = 109/179 (60%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DD++ LF M+ P PS+ +++LLS K+++Y V YL+++M+ GI NLC+ +I
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+NC C Q+ L S LG + KLG+EP++ F +LL G + +A +F +++ +
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
+PN + T++ GLCK+ Q NA DLL M+ G P+ Y+++I GLCN+G DDA
Sbjct: 183 -EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Score = 79.3 bits (194), Expect = 6e-13
Identities = 50/178 (28%), Positives = 86/178 (48%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A L+ EMI S P + Y+ L+ A +F M +G ++ + SI +
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
N C ++VE G + + + G N + L++G GK + AE +F+ ++ +
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV- 392
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN ++ GLC NG+ A +L MQK+G + ++ Y+ +I G+C G V DA
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 65.9 bits (159), Expect = 7e-09
Identities = 41/180 (22%), Positives = 83/180 (46%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DDA R+ M P V +N L+ VK A L+++M R ++ ++ + S+
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ C +++ + G + G P++ ++ L+ G K LF ++ +
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+ N ++ G C+ G+ A ++ + M G PN+ Y+ ++ GLC+NG ++ A+
Sbjct: 358 VR-NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/179 (24%), Positives = 84/179 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA+ +F M+ + +P+V YN ++ K ++ A L ++M GI + + + +
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C+ + + ++ + K P++ F L+ V G+ SEAE L+ +++ L
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL- 287
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ ++ GLC + A + M G P+V YS +I+G C + V+ M
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Score = 61.2 bits (147), Expect = 2e-07
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A ++F M++ P V Y+ L++ K ++ + LF +M RG+ N + ++
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ C ++ + I + G PN+ + LL GL GK +A + + +
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427
Query: 181 CQPNDSMILT---VMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVD 11
D+ I+T ++ G+CK G+ +A DL + G P++ Y+A++ GL G+
Sbjct: 428 ----DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483
Query: 10 DA 5
+A
Sbjct: 484 EA 485
>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 134 bits (337), Expect = 2e-29
Identities = 68/185 (36%), Positives = 110/185 (59%)
Frame = -3
Query: 556 SIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLC 377
+++C DDAV LFR+M+ P PSV ++KL + +E Y LF +M+ GI +N
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLNMEHYSAVVSLFREMQKLGIPINDF 111
Query: 376 SLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKI 197
L+I +N C +V+ GFS+L K G ++ F TL++G+ K +A +LF+++
Sbjct: 112 ILNIVINSYCLMHRVDCGFSVLPIYLKNGIPFDVVTFTTLIRGIFAENKVKDAVNLFKRL 171
Query: 196 LTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGM 17
+ K+C+PN+ M TVM+GL K G S+ LL++M++ PN+ Y+ VID LC +
Sbjct: 172 VREKICEPNEVMYATVMNGLSKWGHSQKTLSLLRLMEQGNTKPNIFNYNIVIDSLCKDRN 231
Query: 16 VDDAM 2
+D A+
Sbjct: 232 LDAAI 236
Score = 82.0 bits (201), Expect = 1e-13
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF+ ++ +P+ Y +++ K + L M + N+ + +I
Sbjct: 163 DAVNLFKRLVREKICEPNEVMYATVMNGLSKWGHSQKTLSLLRLMEQGNTKPNIFNYNIV 222
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C R ++ S+L + K G P++ F +L+ GL G+ + +LF ++L L +
Sbjct: 223 IDSLCKDRNLDAAISLLNEMNKKGILPDIFTFNSLIDGLCKFGQWEKVRTLFSEMLNLNI 282
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ V+ GLCK G+ +A ++++ M G PNV Y+A+IDG C G VD A
Sbjct: 283 -YPDVYTFNMVIDGLCKEGKVEDAEEVMRHMTGKGVEPNVITYNAIIDGYCLCGQVDRA 340
Score = 82.0 bits (201), Expect = 1e-13
Identities = 50/179 (27%), Positives = 89/179 (49%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + R M +P+V YN ++ + A +FD M + IE N+ S S
Sbjct: 303 EDAEEVMRHMTGKGVEPNVITYNAIIDGYCLCGQVDRARIVFDIMIDKCIEPNIISYSTL 362
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+N C ++++ + + + G +PN+ I+ T+L+GL VG+ A F ++L+
Sbjct: 363 INGYCKKKKLAEAMQLFHEISQKGSKPNIIIYTTILQGLFEVGRIGNARKFFAEMLSTGH 422
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
P+ T++ G K G A L +++ N +++ Y+ VI+GLC NG +D A
Sbjct: 423 V-PDLYTHCTLLKGYFKYGLVEEALSLFNELERKTENADIEFYNVVINGLCKNGKLDKA 480
Score = 70.1 bits (170), Expect = 4e-10
Identities = 47/175 (26%), Positives = 87/175 (49%)
Frame = -3
Query: 526 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 347
LF EM+ L+ P V +N ++ K + + A + M +G+E N+ + + ++ C
Sbjct: 273 LFSEMLNLNIYPDVYTFNMVIDGLCKEGKVEDAEEVMRHMTGKGVEPNVITYNAIIDGYC 332
Query: 346 HRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 167
QV+ + + EPN+ ++TL+ G K +EA LF +I + K +PN
Sbjct: 333 LCGQVDRARIVFDIMIDKCIEPNIISYSTLINGYCKKKKLAEAMQLFHEI-SQKGSKPNI 391
Query: 166 SMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+ T++ GL + G+ NAR M TG P++ + ++ G G+V++A+
Sbjct: 392 IIYTTILQGLFEVGRIGNARKFFAEMLSTGHVPDLYTHCTLLKGYFKYGLVEEAL 446
>ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Fragaria vesca subsp. vesca]
Length = 677
Score = 134 bits (336), Expect = 2e-29
Identities = 69/180 (38%), Positives = 99/180 (55%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D A+ +F EM+ P PSV K+L VKL+ Y LF +M I + C+LS+
Sbjct: 124 DFALTVFHEMLRSRPLPSVIPLTKILGQLVKLKHYSAVIPLFKQMLLCRIAPDACTLSVI 183
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+NC CH ++ G S+ GS FKLG +P + F TL+ G VL + EA +F +L
Sbjct: 184 INCYCHLSRMGFGLSVFGSFFKLGLQPTVITFNTLIHGFVLNNQVGEASRIFTNMLEGGH 243
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
C+PN T++ G CKNG A LL+ M++ G PN+ YS VID LC ++D+ +
Sbjct: 244 CKPNVVTFTTLIKGFCKNGNKSAAVQLLRNMEERGCEPNIVCYSTVIDSLCKETLIDEGL 303
Score = 84.7 bits (208), Expect = 2e-14
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+ ++LF EMI P V Y+ ++ +L +++ A L D+M + + N+ + S+
Sbjct: 300 DEGLKLFSEMITRGIVPDVVTYSSMIHGVCRLGQWREATRLLDQMLSKRVSPNVFTFSVL 359
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR------- 203
++ C V S++ + + G +P+ I+++L+ G + G+ +A +F
Sbjct: 360 VDALCKEGLVLKAKSVVQMMIQRGIQPDAFIYSSLMNGYCMQGEMDKARQIFDLLISKRS 419
Query: 202 --------------------------KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDL 101
KI+ L PN +++ G CK G+ + A++L
Sbjct: 420 VDVHCCSILIDGYCKAQEVDQAKKIVKIMRLMELVPNTITYTSLIDGFCKAGRIQEAQNL 479
Query: 100 LQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
MQ G PN + Y+ ++DGLCNN + AM
Sbjct: 480 FTEMQGCGQLPNAQTYTVMLDGLCNNQQLSMAM 512
Score = 70.5 bits (171), Expect = 3e-10
Identities = 43/178 (24%), Positives = 82/178 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A LF EM P+ Y +L ++ +A L +M +E+ + ++ +
Sbjct: 475 EAQNLFTEMQGCGQLPNAQTYTVMLDGLCNNQQLSMAMELLKEMEANKLELTITVYNVVI 534
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
C +E + L +P++ + ++ GL L G EAE L +++ +++L
Sbjct: 535 EGLCKAGNIESARDLFSHLSTKELQPDVRTYNIMIHGLCLHGLLIEAEELLKEMRSMELV 594
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN T++ G CK G+ + A+ L MQ G P+ Y +I GL ++ ++ +A
Sbjct: 595 -PNTITYTTLIDGFCKAGRIQEAQKLFSEMQSCGQLPDAITYRIMIHGLSHHDLIIEA 651
Score = 69.3 bits (168), Expect = 7e-10
Identities = 44/179 (24%), Positives = 83/179 (46%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D A ++ + M + P+ Y L+ K + A LF +M+ G N + ++
Sbjct: 439 DQAKKIVKIMRLMELVPNTITYTSLIDGFCKAGRIQEAQNLFTEMQGCGQLPNAQTYTVM 498
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C+ +Q+ + +L + E + ++ +++GL G A LF + T +L
Sbjct: 499 LDGLCNNQQLSMAMELLKEMEANKLELTITVYNVVIEGLCKAGNIESARDLFSHLSTKEL 558
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
QP+ ++ GLC +G A +LL+ M+ PN Y+ +IDG C G + +A
Sbjct: 559 -QPDVRTYNIMIHGLCLHGLLIEAEELLKEMRSMELVPNTITYTTLIDGFCKAGRIQEA 616
Score = 64.3 bits (155), Expect = 2e-08
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+ + +F EM+ + P P V +++LL+ +LE Y V LF +M GI + +L+I
Sbjct: 5 EQTLNMFNEMLHMRPLPPVACFSQLLAQIARLERYDVVIPLFKQMGVMGIAPDASTLNIV 64
Query: 361 MNCCCHRRQVE-LGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLK 185
NC CH +Q LG + KLG + + F +L+ +L T ++ K+ L
Sbjct: 65 TNCYCHMKQAPGLGLPVFPHFLKLGLQLDPTTFTSLINAFLLQTTTPPKKTSNPKLYYL- 123
Query: 184 LCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVI 41
LTV + + SR ++ + + G +K YSAVI
Sbjct: 124 ------DFALTVFHEMLR---SRPLPSVIPLTKILGQLVKLKHYSAVI 162
>ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product
[Arabidopsis thaliana] gi|110737318|dbj|BAF00605.1|
hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 134 bits (336), Expect = 2e-29
Identities = 68/179 (37%), Positives = 110/179 (61%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DD++ LF M+ P PS+ +++LLS K+++Y V YL+++M+ GI NLC+ +I
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+NC C Q+ L S LG + KLG+EP++ F +LL G + +A +F +++ +
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
+PN + T++ GLCK+ Q NA DLL M+K G P+V Y+++I GLC++G DA
Sbjct: 183 -KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Score = 80.1 bits (196), Expect = 4e-13
Identities = 50/178 (28%), Positives = 85/178 (47%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A + EMI S P + Y+ L+ A +F M +G ++ + SI +
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
N C ++VE G + + + G N + L++G GK + AE +FR+++ +
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV- 392
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN ++ GLC NG+ A +L MQK G + ++ Y+ +I G+C G V DA
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 64.3 bits (155), Expect = 2e-08
Identities = 42/179 (23%), Positives = 84/179 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA+ +F +M+ + +P+V YN ++ K ++ A L ++M GI ++ + + +
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C + ++ + K P++ F L+ V G+ SEAE + +++ L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL- 287
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ ++ GLC + A ++ M G P+V YS +I+G C + V+ M
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Score = 62.8 bits (151), Expect = 6e-08
Identities = 39/179 (21%), Positives = 82/179 (45%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA R+ M P V +N L+ VK A +++M R ++ ++ + S+ +
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
C +++ + G + G P++ ++ L+ G K LF ++ +
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+ N ++ G C+ G+ A ++ + M G +PN+ Y+ ++ GLC+NG ++ A+
Sbjct: 359 R-NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Score = 60.1 bits (144), Expect = 4e-07
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A +F M++ P V Y+ L++ K ++ + LF +M RG+ N + +I
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ C ++ + I + G PN+ + LL GL GK +A ++ L
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA------LVILAD 421
Query: 181 CQPN--DSMILT---VMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGM 17
Q N D+ I+T ++ G+CK G+ +A D+ + G P++ Y+ ++ GL G+
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 16 VDDA 5
+A
Sbjct: 482 RREA 485
>ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 659
Score = 133 bits (335), Expect = 3e-29
Identities = 71/187 (37%), Positives = 109/187 (58%)
Frame = -3
Query: 565 DFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEV 386
+F + +DAV +F +++ P PSV + KLL + ++EY V F++MR GI
Sbjct: 110 EFRDVNSLNDAVCVFHQLVRKEPVPSVVEFAKLLRVMINMKEYSVVVSFFEEMRKLGIPF 169
Query: 385 NLCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLF 206
+ L+I +N C E GFS+LG FK G + N+ F+TL++GL K +A LF
Sbjct: 170 DDYILTIVINSFCLLGCSENGFSVLGVFFKSGVQFNVVTFSTLMRGLFEQNKIQDAMWLF 229
Query: 205 RKILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCN 26
RK++ K+C+ ++ M TVM+GLCK G ++ A LL++M++ PN YS V+D LC
Sbjct: 230 RKLVKEKICKMDEVMFGTVMNGLCKQGHTQTALSLLRIMEQGDAKPNTVVYSIVVDALCK 289
Query: 25 NGMVDDA 5
+ MV A
Sbjct: 290 DQMVGAA 296
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/178 (26%), Positives = 83/178 (46%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A+ L R M +P+ Y+ ++ K + AF LF++M+ +GI N+ + S ++
Sbjct: 261 ALSLLRIMEQGDAKPNTVVYSIVVDALCKDQMVGAAFNLFNEMKRKGITPNVLTYSSLVD 320
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C Q E +L + L PN+ F+ L+ G +A + KI+ K
Sbjct: 321 GFCKFDQWEKVRLLLDEMMYLNIFPNVHTFSMLVDAFCKKGMVEDAVEVL-KIMVQKGEH 379
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ T+M G C + AR +L M G P++ +Y+ +++G C +D+AM
Sbjct: 380 PDVVTFNTIMEGYCLRDEIDVARRVLDSMIDVGVKPDIFSYNILVNGYCKQKKLDEAM 437
Score = 67.0 bits (162), Expect = 3e-09
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DAV + + M+ P V +N ++ +E VA + D M G++ ++ S +I
Sbjct: 364 EDAVEVLKIMVQKGEHPDVVTFNTIMEGYCLRDEIDVARRVLDSMIDVGVKPDIFSYNIL 423
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILT--- 191
+N C +++++ + + + G +P++ ++T+L+GL VG+ +E+ F ++
Sbjct: 424 VNGYCKQKKLDEAMHLYCEISQKGLKPDIVTYSTILQGLFEVGRVECSENFFTEMQNAGH 483
Query: 190 ---LKLC-------------------------QPNDSMIL---TVMSGLCKNGQSRNARD 104
+ C Q D+ IL T G K + AR
Sbjct: 484 SPDIYTCGIMLHGYLKNGHVEKAMSLFHRWEKQKEDTYILIYNTGNDGFFKIQKLDRARS 543
Query: 103 LLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
+ + G +P+V Y+ ++GLC G+VD+A
Sbjct: 544 IFDKLYSVGLHPDVIRYNVTVNGLCIEGLVDEA 576
Score = 63.9 bits (154), Expect = 3e-08
Identities = 41/175 (23%), Positives = 83/175 (47%)
Frame = -3
Query: 535 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 356
A LF EM P+V Y+ L+ K ++++ L D+M + I N+ + S+ ++
Sbjct: 296 AFNLFNEMKRKGITPNVLTYSSLVDGFCKFDQWEKVRLLLDEMMYLNIFPNVHTFSMLVD 355
Query: 355 CCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 176
C + VE +L + + G P++ F T+++G L + A + ++ + + +
Sbjct: 356 AFCKKGMVEDAVEVLKIMVQKGEHPDVVTFNTIMEGYCLRDEIDVARRVLDSMIDVGV-K 414
Query: 175 PNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVD 11
P+ +++G CK + A L + + G P++ YS ++ GL G V+
Sbjct: 415 PDIFSYNILVNGYCKQKKLDEAMHLYCEISQKGLKPDIVTYSTILQGLFEVGRVE 469
>ref|XP_006400202.1| hypothetical protein EUTSA_v10015756mg, partial [Eutrema
salsugineum] gi|557101292|gb|ESQ41655.1| hypothetical
protein EUTSA_v10015756mg, partial [Eutrema salsugineum]
Length = 503
Score = 133 bits (334), Expect = 4e-29
Identities = 66/179 (36%), Positives = 109/179 (60%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DD++ LF M+ P PS+ +++LLS K+++Y V YL+++M+ GI NL + +I
Sbjct: 63 DDSLELFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLYTCNIL 122
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+NC C + L S LG + KLG++P++ F +LL G + +A S+F +++ +
Sbjct: 123 LNCFCRCSRFSLALSFLGKMMKLGHKPSIVTFGSLLNGYCRRDRIYDALSMFDRMVEMGY 182
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
+PN + T++ GLCKN Q NA DLL M++ G P+V Y++++ GLCN+G DA
Sbjct: 183 -EPNVVIYNTIIDGLCKNNQVNNALDLLSQMEQDGIRPDVVTYNSLVSGLCNSGRWSDA 240
Score = 81.6 bits (200), Expect = 1e-13
Identities = 49/175 (28%), Positives = 87/175 (49%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A L+ EMI S P + Y L++ A ++FD M + ++ + SI +
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYTLLINGLCMYSRLDEAEHMFDFMVSKRCFPDVVTYSILI 333
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
N C R+VE G + + + G N + L++G GK + AE +F++++ +
Sbjct: 334 NGYCKSRKVEHGMKLFCEMPQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFKRMVVCGVL 393
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMV 14
PN ++ GLC NG+ A +L+ MQK+G + ++ Y+ +I G+C G V
Sbjct: 394 -PNIITYNVLLHGLCDNGKIEKALVILEDMQKSGMDADIVTYNIIIRGMCKAGEV 447
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/179 (21%), Positives = 82/179 (45%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA R+ R M P V +N L+ VK A L+++M R ++ ++ + ++ +
Sbjct: 239 DATRMVRYMSKREINPDVFTFNALIDACVKEGNLLEAEELYEEMIRRSLDPDIVTYTLLI 298
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
N C +++ + + P++ ++ L+ G K LF ++ +
Sbjct: 299 NGLCMYSRLDEAEHMFDFMVSKRCFPDVVTYSILINGYCKSRKVEHGMKLFCEMPQRGVV 358
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+ N ++ G C+ G+ A ++ + M G PN+ Y+ ++ GLC+NG ++ A+
Sbjct: 359 R-NTVTYTILIQGYCRAGKLNVAEEIFKRMVVCGVLPNIITYNVLLHGLCDNGKIEKAL 416
Score = 60.5 bits (145), Expect = 3e-07
Identities = 41/179 (22%), Positives = 80/179 (44%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA+ +F M+ + +P+V YN ++ K + A L +M GI ++ + + +
Sbjct: 169 DALSMFDRMVEMGYEPNVVIYNTIIDGLCKNNQVNNALDLLSQMEQDGIRPDVVTYNSLV 228
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C+ + ++ + K P++ F L+ V G EAE L+ +++ L
Sbjct: 229 SGLCNSGRWSDATRMVRYMSKREINPDVFTFNALIDACVKEGNLLEAEELYEEMIRRSL- 287
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ +++GLC + A + M P+V YS +I+G C + V+ M
Sbjct: 288 DPDIVTYTLLINGLCMYSRLDEAEHMFDFMVSKRCFPDVVTYSILINGYCKSRKVEHGM 346
Score = 56.6 bits (135), Expect = 4e-06
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
D+A +F M++ P V Y+ L++ K + + LF +M RG+ N + +I
Sbjct: 308 DEAEHMFDFMVSKRCFPDVVTYSILINGYCKSRKVEHGMKLFCEMPQRGVVRNTVTYTIL 367
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+ C ++ + I + G PN+ + LL GL GK +A + + +
Sbjct: 368 IQGYCRAGKLNVAEEIFKRMVVCGVLPNIITYNVLLHGLCDNGKIEKALVILEDMQKSGM 427
Query: 181 CQPNDSMILT---VMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVD 11
D+ I+T ++ G+CK G+ A DL + G P++ Y+ ++ GL G+
Sbjct: 428 ----DADIVTYNIIIRGMCKAGEVAYAWDLYCSLNLKGLVPDIWTYTTMMLGLYKKGLRR 483
Query: 10 DA 5
+A
Sbjct: 484 EA 485
>ref|XP_006584901.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Glycine max]
Length = 555
Score = 132 bits (333), Expect = 5e-29
Identities = 66/180 (36%), Positives = 109/180 (60%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DD + F M+ P P + ++KLL V++ Y A LF ++ +GI ++ +L+I
Sbjct: 37 DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
+NC CH+ + FS+LG++ K+G++PN+ F TL+ G + G S+A + FR L K
Sbjct: 97 INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMA-FRLDLMAKG 155
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
++ ++++GLCKNGQ+R+A LLQ M++ PN+ YS VIDGLC + ++ DA+
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Score = 65.9 bits (159), Expect = 7e-09
Identities = 47/179 (26%), Positives = 85/179 (47%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
DA++L ++M +P++ Y+ ++ K A LF + RGI V++ + + +
Sbjct: 178 DALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI 237
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ CC Q +L + + P+ F L+ L G+ EA+ +F ++ +
Sbjct: 238 HGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFA-VMMKRGE 296
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
+P+ +M G C + AR+L M K G P+V Y+ +I+G C MVD+AM
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAM 355
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/177 (24%), Positives = 82/177 (46%)
Frame = -3
Query: 550 RCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSL 371
R DA+RLF + + V AYN L+ + +++ A L M I + +
Sbjct: 209 RLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTF 268
Query: 370 SIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILT 191
+I ++ C ++ + + K G +P++ + L++G L SEA LF +++
Sbjct: 269 NILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVK 328
Query: 190 LKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNG 20
L +P+ +++G CK A L + ++ PN+ Y+++IDGLC G
Sbjct: 329 RGL-EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384
Score = 63.5 bits (153), Expect = 4e-08
Identities = 44/179 (24%), Positives = 84/179 (46%)
Frame = -3
Query: 538 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 359
+A LF M+ +P V YN L++ K++ A LF ++R + + NL + + +
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLI 377
Query: 358 NCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 179
+ C ++ ++ + G P++ + L +A SLFR+I+ +
Sbjct: 378 DGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV--QGI 435
Query: 178 QPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 2
P+ M ++ CK + + A + LQ + G PNV+ Y+ +I+ LC + D+AM
Sbjct: 436 WPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494
Score = 55.5 bits (132), Expect = 1e-05
Identities = 42/186 (22%), Positives = 78/186 (41%)
Frame = -3
Query: 562 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 383
+ I D+A+ LF+E+ + P++ YN L+ KL L D+M RG +
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404
Query: 382 LCSLSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 203
+ + +I ++ C + E S+ + + G P+ ++ +++ K AE +
Sbjct: 405 IVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQ 463
Query: 202 KILTLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 23
+L + C PN +++ LCK+ A LL M P+ + +I L
Sbjct: 464 HLL-IHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQER 522
Query: 22 GMVDDA 5
D A
Sbjct: 523 NETDKA 528
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 132 bits (333), Expect = 5e-29
Identities = 69/184 (37%), Positives = 105/184 (57%)
Frame = -3
Query: 553 IRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCS 374
+ C DDAV LF M+ + P PSV ++KL + ++ Y LF +MR GI ++
Sbjct: 40 VSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSI 99
Query: 373 LSIAMNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKIL 194
L+I N C R +++ FS+L K G N+ F TLL GL K ++A LF+K++
Sbjct: 100 LNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159
Query: 193 TLKLCQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMV 14
K+C+PN+ M TVM+GL K G + LL++M++ P+V+ YS VID LC + +
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219
Query: 13 DDAM 2
D A+
Sbjct: 220 DAAI 223
Score = 84.3 bits (207), Expect = 2e-14
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Frame = -3
Query: 541 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
+DA + R MI +P + Y+ ++ + A +F+ +R +GI+ N+ S SI
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKIL---- 194
+N C ++ + + G + + G +P+ ++T+L GL+ VG+ +A+ +F ++L
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409
Query: 193 TLKLC------------------------------QPNDSMILTVMSGLCKNGQSRNARD 104
T +C N S V++GLCKN + R A
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469
Query: 103 LLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDD 8
+ + + G P+V+ Y+ +I G C G+ D+
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDE 501
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/179 (24%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 538 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 362
DAV LF++++ +P+ Y +++ K + L M + ++ + SI
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIV 209
Query: 361 MNCCCHRRQVELGFSILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 182
++ C ++ ++L + + PN+ + +L+ GL +G+ + ++L +++ L +
Sbjct: 210 IDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNI 269
Query: 181 CQPNDSMILTVMSGLCKNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 5
PN ++ GLCK G+ +A ++++ M + G P++ YSA++DG C G VD A
Sbjct: 270 -NPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327