BLASTX nr result

ID: Mentha27_contig00036680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00036680
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21912.1| hypothetical protein MIMGU_mgv1a000755mg [Mimulus...    62   1e-07
gb|EXC20795.1| PHD finger protein 3 [Morus notabilis]                  58   2e-06
ref|XP_007013745.1| SPOC domain / Transcription elongation facto...    57   3e-06
ref|XP_007013744.1| SPOC domain / Transcription elongation facto...    57   3e-06
ref|XP_007203213.1| hypothetical protein PRUPE_ppa000459mg [Prun...    56   5e-06
ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arab...    56   6e-06

>gb|EYU21912.1| hypothetical protein MIMGU_mgv1a000755mg [Mimulus guttatus]
          Length = 993

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 46/121 (38%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
 Frame = -3

Query: 311  SHHKHSSKKQPFSPSNRLQDXXXXXXXXXSKAARASAPVFNNTSCLKXXXXXXXXXXXXP 132
            SHHKH+SKKQPF+   R+QD         +   R+S  V +     K            P
Sbjct: 785  SHHKHTSKKQPFATPKRVQD---SPSFNSNTTNRSSPHVLS-----KSQPQTEEDDDIPP 836

Query: 131  GFGP---TAPKDEDDLPEFNFTSVTSQ---------------KTTPPSVDHVRELIKKYG 6
            GFGP    A +++DDLPEFNF+   +                K T   VD VRELIKKYG
Sbjct: 837  GFGPAAAAAAREDDDLPEFNFSGNMNTAAMPIISPHNLHQGVKMTQRPVDQVRELIKKYG 896

Query: 5    Q 3
            Q
Sbjct: 897  Q 897


>gb|EXC20795.1| PHD finger protein 3 [Morus notabilis]
          Length = 1103

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/124 (36%), Positives = 54/124 (43%), Gaps = 21/124 (16%)
 Frame = -3

Query: 311  SHHKHSSKKQPFSPSNRLQDXXXXXXXXXSKAARASAPVFNNTSCLKXXXXXXXXXXXXP 132
            SHHKH+ KKQ F+   + +          S A R  AP  +  S               P
Sbjct: 840  SHHKHALKKQHFTSRRQQESPLNSNFAPKSAAPRGLAPANSRPS------HDDDEDDIPP 893

Query: 131  GFGPTAPKDEDDLPEFNFTS--------VTSQKTTPPS-------------VDHVRELIK 15
            GFGP   +DEDDLPEFNF+          +SQK T  S             V+ VRELI 
Sbjct: 894  GFGPPVARDEDDLPEFNFSGGSNPPVSHFSSQKHTRGSGVASFCAPQTSRPVEQVRELIH 953

Query: 14   KYGQ 3
            KYGQ
Sbjct: 954  KYGQ 957


>ref|XP_007013745.1| SPOC domain / Transcription elongation factor S-II protein, putative
            isoform 2 [Theobroma cacao] gi|508784108|gb|EOY31364.1|
            SPOC domain / Transcription elongation factor S-II
            protein, putative isoform 2 [Theobroma cacao]
          Length = 1054

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 45/129 (34%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
 Frame = -3

Query: 311  SHHKHSSKKQPFSPSNRLQDXXXXXXXXXSKA---ARASAPVFNNTSCLKXXXXXXXXXX 141
            SHHKH+SKKQ F+ S R QD               + +  PV++  S             
Sbjct: 814  SHHKHTSKKQHFT-SRRHQDKDANMNSNFPSKPTFSHSGPPVYSKPSL-----DDNEDDD 867

Query: 140  XXPGFGPTAPKDEDDLPEFNF------------TSVTSQK-----------TTPPSVDHV 30
              PGFGP   +DEDDLPEFNF            T   SQ+           T+   VD +
Sbjct: 868  VPPGFGPATSRDEDDLPEFNFSGGSNPSGPQYPTGYQSQRVGIASAHLHSQTSSRPVDQM 927

Query: 29   RELIKKYGQ 3
            REL++KYGQ
Sbjct: 928  RELVQKYGQ 936


>ref|XP_007013744.1| SPOC domain / Transcription elongation factor S-II protein, putative
            isoform 1 [Theobroma cacao] gi|508784107|gb|EOY31363.1|
            SPOC domain / Transcription elongation factor S-II
            protein, putative isoform 1 [Theobroma cacao]
          Length = 1061

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 45/129 (34%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
 Frame = -3

Query: 311  SHHKHSSKKQPFSPSNRLQDXXXXXXXXXSKA---ARASAPVFNNTSCLKXXXXXXXXXX 141
            SHHKH+SKKQ F+ S R QD               + +  PV++  S             
Sbjct: 821  SHHKHTSKKQHFT-SRRHQDKDANMNSNFPSKPTFSHSGPPVYSKPSL-----DDNEDDD 874

Query: 140  XXPGFGPTAPKDEDDLPEFNF------------TSVTSQK-----------TTPPSVDHV 30
              PGFGP   +DEDDLPEFNF            T   SQ+           T+   VD +
Sbjct: 875  VPPGFGPATSRDEDDLPEFNFSGGSNPSGPQYPTGYQSQRVGIASAHLHSQTSSRPVDQM 934

Query: 29   RELIKKYGQ 3
            REL++KYGQ
Sbjct: 935  RELVQKYGQ 943


>ref|XP_007203213.1| hypothetical protein PRUPE_ppa000459mg [Prunus persica]
            gi|462398744|gb|EMJ04412.1| hypothetical protein
            PRUPE_ppa000459mg [Prunus persica]
          Length = 1161

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 46/131 (35%), Positives = 54/131 (41%), Gaps = 28/131 (21%)
 Frame = -3

Query: 311  SHHKHSSKKQPFSPS----NRLQDXXXXXXXXXSKAARASAPVFNNTSCLKXXXXXXXXX 144
            SHHKH SKKQ +S S    +R  D           A   +    N  S            
Sbjct: 886  SHHKHISKKQHYSSSTTTSSRRHDTNLNTNYTSKPAQARTVTPTNTRSA------HDDDD 939

Query: 143  XXXPGFGPTAPKDEDDLPEFNFT-----SVTSQKTTPPS-------------------VD 36
               PGFGP AP+DEDDLPEFNF+     S+       PS                   VD
Sbjct: 940  DVPPGFGPGAPRDEDDLPEFNFSGGANPSLPQYSAQRPSRGPGVAAPVYPKSHTPSRPVD 999

Query: 35   HVRELIKKYGQ 3
             +RELI+KYGQ
Sbjct: 1000 QMRELIQKYGQ 1010


>ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
            lyrata] gi|297318006|gb|EFH48428.1| hypothetical protein
            ARALYDRAFT_489410 [Arabidopsis lyrata subsp. lyrata]
          Length = 1027

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 7/49 (14%)
 Frame = -3

Query: 131  GFGPTAPKDEDDLPEFNFTS----VTSQKTTPP---SVDHVRELIKKYG 6
            GFGP A KD+DDLPEFNF+S    VTS    PP   S+D VRELI KYG
Sbjct: 890  GFGPVAAKDDDDLPEFNFSSSSGPVTSFPQPPPQSRSMDQVRELILKYG 938


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