BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00036658
         (823 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...   341   2e-91
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   340   5e-91
gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis D...   338   1e-90
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  335   9e-90
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...   333   6e-89
gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]     332   1e-88
gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]             331   2e-88
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                331   2e-88
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]         330   3e-88
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         330   5e-88
gb|AAL66753.1|AF464738_4 putative copia-type pol polyprotein [Ze...   330   5e-88
gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]                329   7e-88
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                328   1e-87
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    328   1e-87
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]   327   4e-87
gb|AAK70631.1|AC091238_9 Putative copia-type pol polyprotein [Or...   326   7e-87
gb|AAP52457.2| retrotransposon protein, putative, Ty1-copia subc...   326   7e-87
gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]             325   1e-86
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   325   1e-86
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         325   1e-86

>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  341 bits (874), Expect = 2e-91
 Identities = 164/257 (63%), Positives = 202/257 (78%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP++ ++A  D  W+ AMQEELN+F+RN+VW LV RP++  +I  KWVFRNK DEN  +I
Sbjct: 1640 EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNII 1699

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+GYCQ+EGIDY+ET+APVARLEAIR+ LA+A+++ F +YQMDVKSAFLNG +
Sbjct: 1700 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYI 1759

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE    P  VYKL KA+YGLKQAPRAWY+ LS FLL + FK G +D TL
Sbjct: 1760 VEEVYVEQPPGFESFDLPNHVYKLEKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTL 1819

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            F     +D+L+VQIYVDDIIFGS +  LC+ F + M  E+EMSMMGE++FFLGLQ+KQ  
Sbjct: 1820 FIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLK 1879

Query: 771  DGIFICQSKYANELATK 821
            DGIFI Q KY  +L  K
Sbjct: 1880 DGIFISQEKYTRDLLKK 1896


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  340 bits (871), Expect = 5e-91
 Identities = 165/257 (64%), Positives = 203/257 (78%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EPKTVEEAL+D  W+ AMQEELN+F+RN+VW LV +P+ + +I  KWVFRNK +E  EV 
Sbjct: 1207 EPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVT 1266

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+GY QQEGIDY ET+APVARLEAIRL L+YA +    +YQMDVKSAFLNG++
Sbjct: 1267 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVI 1326

Query: 414  GEEVYVEQPPGFEE-AGPKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYV+QPPGFE+   P  VYKL K++YGLKQAPRAWY+ LS FL+ + F+RG VD TL
Sbjct: 1327 EEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL 1386

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            F    K DIL+VQIYVDDIIFGS +  LC  F +LM+ E+EMSMMGE+ FFLG+Q+ QS 
Sbjct: 1387 FRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSK 1446

Query: 771  DGIFICQSKYANELATK 821
            +G+++ Q+KY  EL  K
Sbjct: 1447 EGVYVHQTKYTKELLKK 1463


>gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 514

 Score =  338 bits (868), Expect = 1e-90
 Identities = 169/257 (65%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54  EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
           EPKT+  AL D DWV AMQEEL EF+RN+VW LV  P    V+  +WVFRNK D+   V 
Sbjct: 3   EPKTIHSALKDPDWVKAMQEELAEFERNQVWDLVPTPPDVTVVGSRWVFRNKTDDQGIVC 62

Query: 234 RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
           RNKARLV KGY QQEGIDYDETYAPVARLEAIR+FLAYAAH+ FKV+QMDVK AFL+G +
Sbjct: 63  RNKARLVVKGYSQQEGIDYDETYAPVARLEAIRIFLAYAAHKNFKVFQMDVKCAFLHGEI 122

Query: 414 GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             +VY++QPPGFE+   P   +KL KAVYGLKQAPRAWY TLSTFL  SGFKRGS+D+TL
Sbjct: 123 DRDVYIQQPPGFEDPQFPNHSFKLQKAVYGLKQAPRAWYSTLSTFLEESGFKRGSIDQTL 182

Query: 591 FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
           F   +   +L+VQIYVDDIIFGS  + L  +F +LMK ++EMSM+GEM  FLGLQVKQS+
Sbjct: 183 FRKIFNKHLLIVQIYVDDIIFGSTDESLSIKFADLMKSKFEMSMIGEMTTFLGLQVKQSS 242

Query: 771 DGIFICQSKYANELATK 821
           DGIFI Q  Y   L T+
Sbjct: 243 DGIFINQENYVKNLLTR 259


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  335 bits (860), Expect = 9e-90
 Identities = 166/257 (64%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 553  EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 611

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 612  RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 671

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VY+L KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 672  KEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 731

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   ++D+ + QIYVDDIIFGS +K  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 732  FTKTLENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 791

Query: 771  DGIFICQSKYANELATK 821
            +G FICQ+KY  ++ TK
Sbjct: 792  EGTFICQTKYTQDILTK 808


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score =  333 bits (853), Expect = 6e-89
 Identities = 162/257 (63%), Positives = 201/257 (78%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EPKTVEEAL+D  W+ +MQEELN+F+RN+VW LV +P  + +I  KWVFRNK++E  EV 
Sbjct: 1146 EPKTVEEALSDDGWILSMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKQNEQGEVT 1205

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+GY QQEGIDY ET+APVARLEAIRL L+YA +    +YQMDVKSA LNG++
Sbjct: 1206 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSALLNGVI 1265

Query: 414  GEEVYVEQPPGFEE-AGPKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYV+QPPGFE+   P  VYKL K++YGLKQAPRAWY+ LS FL+ + F+RG VD TL
Sbjct: 1266 EEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL 1325

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            F    K DIL+VQIYVDDIIFGS +  LC  F +LM+ E+EMSMMGE+ FFL +Q+ QS 
Sbjct: 1326 FRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLVIQINQSK 1385

Query: 771  DGIFICQSKYANELATK 821
            +G+++ Q+KY  EL  K
Sbjct: 1386 EGVYVHQTKYTKELLKK 1402


>gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]
          Length = 1694

 Score =  332 bits (851), Expect = 1e-88
 Identities = 164/257 (63%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  V+EAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 1353 EPHRVDEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 1411

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 1412 RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 1471

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VY+L KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 1472 KEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 1531

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT    +D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 1532 FTKTLDNDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 1591

Query: 771  DGIFICQSKYANELATK 821
            +G FICQ+KY  ++ TK
Sbjct: 1592 EGTFICQTKYTQDILTK 1608


>gb|AAL75488.1|AF466202_14 putative pol protein [Zea mays]
          Length = 800

 Score =  331 bits (848), Expect = 2e-88
 Identities = 165/257 (64%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 332  EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 390

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 391  RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 450

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VY+L KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 451  KEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 510

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   K+D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 511  FTKILKNDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 570

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++ TK
Sbjct: 571  EGTFISQTKYTQDILTK 587


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  331 bits (848), Expect = 2e-88
 Identities = 164/257 (63%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 1382 EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 1440

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+DETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 1441 RNKARLVAKGYSQVEGLDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 1500

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VY+L KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 1501 KEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 1560

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   ++D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 1561 FTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLR 1620

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++  K
Sbjct: 1621 EGTFISQTKYTQDILAK 1637


>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
          Length = 1510

 Score =  330 bits (847), Expect = 3e-88
 Identities = 161/257 (62%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VE+AL D DWV AMQEELN F RN+VW+LV+RP  Q VI  KW+FRNK+DE+  V+
Sbjct: 996  EPTRVEDALGDSDWVMAMQEELNNFARNQVWNLVERPK-QNVIGTKWIFRNKQDEHVVVV 1054

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLV +G+ Q EG+D+ ET+APVARLE+IR+ LAYAAH  F+++QMDVKSAFLNG +
Sbjct: 1055 RNKARLVTQGFTQVEGLDFGETFAPVARLESIRILLAYAAHHDFRLFQMDVKSAFLNGPI 1114

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             E VYVEQPPGFE+   P  VYKLHKA+YGLKQAPRAWYE L  FLL +GF+ G+ D TL
Sbjct: 1115 SELVYVEQPPGFEDPKLPNHVYKLHKALYGLKQAPRAWYECLRDFLLKNGFEIGNADTTL 1174

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT K+K D+ + QIYVDDIIFGS +   C+ F  +M   +EMSMMGE+ FFL LQVKQ+ 
Sbjct: 1175 FTKKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSMMGELTFFLWLQVKQAQ 1234

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++  K
Sbjct: 1235 EGTFISQTKYVKDILKK 1251


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  330 bits (845), Expect = 5e-88
 Identities = 164/257 (63%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 1250 EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 1308

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 1309 RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 1368

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VYKL KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 1369 KEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 1428

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   ++D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 1429 FTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 1488

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++ +K
Sbjct: 1489 EGTFISQTKYTQDILSK 1505


>gb|AAL66753.1|AF464738_4 putative copia-type pol polyprotein [Zea mays]
          Length = 1604

 Score =  330 bits (845), Expect = 5e-88
 Identities = 164/257 (63%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 1250 EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 1308

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 1309 RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 1368

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VYKL KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 1369 KEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 1428

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   ++D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 1429 FTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 1488

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++ +K
Sbjct: 1489 EGTFISQTKYTQDILSK 1505


>gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]
          Length = 1706

 Score =  329 bits (844), Expect = 7e-88
 Identities = 164/257 (63%), Positives = 196/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 1400 EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 1458

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 1459 RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 1518

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VYKL KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 1519 KEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 1578

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT    +D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QV+Q  
Sbjct: 1579 FTKTLNNDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVEQLQ 1638

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++ TK
Sbjct: 1639 EGTFISQTKYTQDILTK 1655


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  328 bits (842), Expect = 1e-87
 Identities = 162/257 (63%), Positives = 195/257 (75%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DW+TAMQEELN F RNEVWSLV RP  Q VI  KWVFRNK+DEN  V 
Sbjct: 1313 EPLKVEEALDDPDWITAMQEELNNFTRNEVWSLVQRPK-QNVIGTKWVFRNKQDENGVVT 1371

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            +NKARLVA+GY Q EG+D+ ETYAPVARLE+IR+ +AYA +  FK+YQMDVKSAFLNG L
Sbjct: 1372 KNKARLVAQGYTQVEGLDFGETYAPVARLESIRILIAYATNHDFKLYQMDVKSAFLNGPL 1431

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             E VYVEQPPGFE+   P  VY LHKA+YGLKQAPRAWY+ L  FL+ +GF  G  D TL
Sbjct: 1432 QERVYVEQPPGFEDPKKPNHVYLLHKALYGLKQAPRAWYDCLKDFLIKNGFTIGKADSTL 1491

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT K  +++ + QIYVDDIIFGS ++  C+ F ++M   +EMSMMGE+ +FLG QVKQ  
Sbjct: 1492 FTRKVDNELFVCQIYVDDIIFGSTNEKFCEEFSKVMTNRFEMSMMGELKYFLGFQVKQLK 1551

Query: 771  DGIFICQSKYANELATK 821
            +G F+CQ+KY  ++  K
Sbjct: 1552 EGTFLCQTKYTQDMLKK 1568


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  328 bits (841), Expect = 1e-87
 Identities = 163/257 (63%), Positives = 196/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN F RNEVW LV RP +Q V+  KWVFRNK+DE+  V 
Sbjct: 553  EPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVT 611

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q EG+D+ ETYAPVARLE+IR+ LAYA +  FK+YQMDVKSAFLNG +
Sbjct: 612  RNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPI 671

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE++  P  VY+L KA+YGLKQAPRAWYE L  FL+ +GFK G  D TL
Sbjct: 672  KEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTL 731

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT   ++D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+ +FLG QVKQ  
Sbjct: 732  FTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQ 791

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+KY  ++  K
Sbjct: 792  EGTFISQTKYTQDILAK 808


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score =  327 bits (837), Expect = 4e-87
 Identities = 158/254 (62%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EPK +++A+ D +W+ AMQEELN+F+R+EVW LV RP++Q VI  KWVFRNK DEN  ++
Sbjct: 623  EPKNIKDAIVDENWMIAMQEELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIV 682

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+GY Q+  IDY+ET+APVARLEAIR+ LA+A  + F +YQMDVKS FLNG +
Sbjct: 683  RNKARLVAQGYNQEXXIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSXFLNGFI 742

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVY EQPPGF+    P  V+KL KA+YGLKQAPRAWYE LS FL   GFK G +D TL
Sbjct: 743  NEEVYXEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKIDTTL 802

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            F    + D+LLVQIYVDDIIFG+ +  LC+ F + M  E+EMSMMGE+NFFLGLQ+KQ  
Sbjct: 803  FIKTKEKDMLLVQIYVDDIIFGATNBSLCEDFSKCMHSEFEMSMMGELNFFLGLQIKQLK 862

Query: 771  DGIFICQSKYANEL 812
            +G FI Q+KY  +L
Sbjct: 863  EGTFINQAKYIKDL 876


>gb|AAK70631.1|AC091238_9 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
            gi|21321748|gb|AAM47283.1|AC122146_2 Putative copia-type
            pol polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  326 bits (835), Expect = 7e-87
 Identities = 159/257 (61%), Positives = 196/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP TVE+AL   DWV AMQEELN F RN+VW+LV+RP  Q VI  KW+FRNK+DE   V+
Sbjct: 1020 EPTTVEDALVYPDWVMAMQEELNNFTRNQVWTLVERPK-QNVIGTKWIFRNKQDEYGVVV 1078

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+G+ Q EG+D+ ET+APVAR E+IR+ LAYAAH  F+++QMDVKSAFLNG +
Sbjct: 1079 RNKARLVAQGFTQVEGLDFGETFAPVARFESIRILLAYAAHHDFRLFQMDVKSAFLNGPI 1138

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             E VYVEQPPGFE+   P  VY+LHKA+YGLKQAPRAWYE L  FLL +GF+ G  D TL
Sbjct: 1139 SELVYVEQPPGFEDLKLPNHVYELHKALYGLKQAPRAWYECLRDFLLKNGFEIGKADTTL 1198

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT K+K D+ + QIYVDDIIFGS +   C+ F  +M   +EMS+MGE+ FFLGLQVKQ+ 
Sbjct: 1199 FTKKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSLMGELTFFLGLQVKQAQ 1258

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+ Y  ++  K
Sbjct: 1259 EGTFISQTNYVKDILKK 1275


>gb|AAP52457.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1305

 Score =  326 bits (835), Expect = 7e-87
 Identities = 159/257 (61%), Positives = 196/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP TVE+AL   DWV AMQEELN F RN+VW+LV+RP  Q VI  KW+FRNK+DE   V+
Sbjct: 1036 EPTTVEDALVYPDWVMAMQEELNNFTRNQVWTLVERPK-QNVIGTKWIFRNKQDEYGVVV 1094

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+G+ Q EG+D+ ET+APVAR E+IR+ LAYAAH  F+++QMDVKSAFLNG +
Sbjct: 1095 RNKARLVAQGFTQVEGLDFGETFAPVARFESIRILLAYAAHHDFRLFQMDVKSAFLNGPI 1154

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             E VYVEQPPGFE+   P  VY+LHKA+YGLKQAPRAWYE L  FLL +GF+ G  D TL
Sbjct: 1155 SELVYVEQPPGFEDLKLPNHVYELHKALYGLKQAPRAWYECLRDFLLKNGFEIGKADTTL 1214

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT K+K D+ + QIYVDDIIFGS +   C+ F  +M   +EMS+MGE+ FFLGLQVKQ+ 
Sbjct: 1215 FTKKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSLMGELTFFLGLQVKQAQ 1274

Query: 771  DGIFICQSKYANELATK 821
            +G FI Q+ Y  ++  K
Sbjct: 1275 EGTFISQTNYVKDILKK 1291


>gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]
          Length = 1657

 Score =  325 bits (834), Expect = 1e-86
 Identities = 166/254 (65%), Positives = 193/254 (75%), Gaps = 1/254 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EP  VEEAL D DWV AMQEELN FKRNEVW+LV RP  Q V+  KWVFRNK+DE+  V 
Sbjct: 1148 EPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQDEHGVVT 1206

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVAKGY Q  G+D++ET+APVARLE+IR+ LAYAAH  F++YQMDVKSAFLNG +
Sbjct: 1207 RNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKSAFLNGPI 1266

Query: 414  GEEVYVEQPPGFE-EAGPKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYVEQPPGFE E  P  V KL KA+YGLKQAPRAWYE L  FLL + FK G  D TL
Sbjct: 1267 KEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFLLANAFKVGKADPTL 1326

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT     D+ + QIYVDDIIFGS ++  C+ F  +M  ++EMSMMGE+N+FLG QVKQ  
Sbjct: 1327 FTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGFQVKQLK 1386

Query: 771  DGIFICQSKYANEL 812
            DG FI Q+KY  +L
Sbjct: 1387 DGTFISQTKYTQDL 1400


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  325 bits (833), Expect = 1e-86
 Identities = 160/257 (62%), Positives = 200/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EPK V  AL+D +WV AM EEL  F+RN+VWSLV+ P    VI  KWVF+NK  E+  ++
Sbjct: 1285 EPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIV 1344

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+G+ Q EG+D++ET+APVARLEAIR+ LA+AA + FK++QMDVKSAFLNG++
Sbjct: 1345 RNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVI 1404

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYV+QPPGFE    P  V+KL KA+YGLKQAPRAWYE L TFLL +GF+ G+VD+TL
Sbjct: 1405 EEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTL 1464

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT     D LLVQIYVDDIIFG  S  L  +F ++M  E+EMSMMGE+ FFLGLQ+KQ+ 
Sbjct: 1465 FTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTK 1524

Query: 771  DGIFICQSKYANELATK 821
            +GIF+ Q+KY+ EL  K
Sbjct: 1525 EGIFVHQTKYSKELLKK 1541


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  325 bits (833), Expect = 1e-86
 Identities = 160/257 (62%), Positives = 200/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 54   EPKTVEEALADHDWVTAMQEELNEFKRNEVWSLVDRPTHQGVIDVKWVFRNKKDENAEVI 233
            EPK V  AL+D +WV AM EEL  F+RN+VWSLV+ P    VI  KWVF+NK  E+  ++
Sbjct: 1264 EPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIV 1323

Query: 234  RNKARLVAKGYCQQEGIDYDETYAPVARLEAIRLFLAYAAHQRFKVYQMDVKSAFLNGIL 413
            RNKARLVA+G+ Q EG+D++ET+APVARLEAIR+ LA+AA + FK++QMDVKSAFLNG++
Sbjct: 1324 RNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVI 1383

Query: 414  GEEVYVEQPPGFEEAG-PKKVYKLHKAVYGLKQAPRAWYETLSTFLLHSGFKRGSVDRTL 590
             EEVYV+QPPGFE    P  V+KL KA+YGLKQAPRAWYE L TFLL +GF+ G+VD+TL
Sbjct: 1384 EEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTL 1443

Query: 591  FTFKYKDDILLVQIYVDDIIFGSRSKFLCDRFGELMKCEYEMSMMGEMNFFLGLQVKQSA 770
            FT     D LLVQIYVDDIIFG  S  L  +F ++M  E+EMSMMGE+ FFLGLQ+KQ+ 
Sbjct: 1444 FTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTK 1503

Query: 771  DGIFICQSKYANELATK 821
            +GIF+ Q+KY+ EL  K
Sbjct: 1504 EGIFVHQTKYSKELLKK 1520