BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00034539
         (1228 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus...   558   e-156
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   554   e-155
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   546   e-153
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   533   e-149
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   530   e-148
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   530   e-148
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   528   e-147
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   528   e-147
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   525   e-146
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     524   e-146
gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlise...   514   e-143
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   512   e-142
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   506   e-141
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   506   e-140
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     503   e-140
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   498   e-138
ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, part...   498   e-138
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   495   e-137
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   495   e-137
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   493   e-137

>gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus guttatus]
          Length = 516

 Score =  558 bits (1437), Expect = e-156
 Identities = 283/393 (72%), Positives = 326/393 (82%), Gaps = 3/393 (0%)
 Frame = +3

Query: 6    RKGRRLNLDKRISMRVTKEKAVSLVRSQRKGRRLNLDKRISMRVTKECEFVALAQNKKHR 185
            R+ RR  +D+ +  +       +LVRSQR+G+RL+L+KR+++R+ KE   +   + + + 
Sbjct: 131  RQPRRKRIDESVETK-------NLVRSQRRGKRLSLEKRVALRMKKESVPLLSQKKEVNN 183

Query: 186  RDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETL 365
            + D+DEK DRL+R+Y+ S+D  SLDWKK KIPPVLPSSEH WLFKLMQPMKEILKVKETL
Sbjct: 184  KSDDDEKIDRLLRDYSISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQPMKEILKVKETL 243

Query: 366  KSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANG 545
             +DLGRE+ DDELA A NT+V QLRKQLEVGR ARNKLIKHNLRLVLFVMNKYFQDFANG
Sbjct: 244  TNDLGREVRDDELAEATNTDVFQLRKQLEVGRTARNKLIKHNLRLVLFVMNKYFQDFANG 303

Query: 546  PRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESV 725
            PRFQDLCQAGVKGL+TAIDRFEP+RKFRLSTYGLFWIRHAIVRSMT+SSFTKVSFGLESV
Sbjct: 304  PRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTISSFTKVSFGLESV 363

Query: 726  RVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFI 905
            RVEIQ+AK EL F+L R+PT EEIIERVGIS ER++EV R SKPI SLH RH++T EEFI
Sbjct: 364  RVEIQKAKTELLFELHRLPTDEEIIERVGISAERFNEVTRVSKPISSLHARHKITHEEFI 423

Query: 906  NAITDV---EGDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNL 1076
            N + D+   EGD R+QPA             KPKESLV+RQRYGLDGKGDRTLGEIAGNL
Sbjct: 424  NGVADIDGFEGDQRQQPALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNL 483

Query: 1077 NISREMVRKYEVKALMKLKHPARVDYLRHYIYK 1175
            NISREMVRK+EVKA MKLKHPARVDYLRH+I K
Sbjct: 484  NISREMVRKHEVKAFMKLKHPARVDYLRHHISK 516


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  554 bits (1427), Expect = e-155
 Identities = 282/374 (75%), Positives = 322/374 (86%), Gaps = 4/374 (1%)
 Frame = +3

Query: 66   AVSLVRSQR-KGRRLNLDKRISMRVTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSST 242
            A ++VRS+R K RRLNL+KRI++R  KE E  A+ Q +K  ++DEDEK DRLVR+Y++S+
Sbjct: 142  ADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDEKIDRLVRDYSASS 201

Query: 243  DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNT 422
            DLVSLDWKKMKIPPVLPS+EH WLFKLMQP+K IL VKET++++LGRE TD++LA A+N 
Sbjct: 202  DLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGREPTDEKLATAINM 261

Query: 423  EVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAID 602
            + VQLRKQLE+GRAARNKLIKHNLRLVLFVMNKYFQDF+NG RFQDLCQAG KGL+TAID
Sbjct: 262  DTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDFSNGSRFQDLCQAGAKGLITAID 321

Query: 603  RFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIP 782
            RFEP+RK RLSTYGLFWIRH+I+RSMTLSSFTKVSFGLESVRVEI++AK EL F+L+R+P
Sbjct: 322  RFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGLESVRVEIRKAKLELMFELKRLP 381

Query: 783  TVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAX 953
            T EEI+ RVGIS ERYHEVMR SKPI SLH RH VTQEEFIN ITD   VEGD R+QPA 
Sbjct: 382  TDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQEEFINGITDVDGVEGDRRKQPAL 441

Query: 954  XXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 1133
                        KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK
Sbjct: 442  LRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 501

Query: 1134 HPARVDYLRHYIYK 1175
            H ARVDYLR Y++K
Sbjct: 502  HRARVDYLRRYVFK 515


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  546 bits (1407), Expect = e-153
 Identities = 283/393 (72%), Positives = 321/393 (81%), Gaps = 7/393 (1%)
 Frame = +3

Query: 15   RRLNLDKRI---SMRVTKEKAVSLVRSQRK-GRRLNLDKRISMRVTKECEFVALAQNKKH 182
            RR    KRI        KE A ++V+++RK  +RLNLD+RI++   KE E VA ++ +K 
Sbjct: 124  RRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKL 183

Query: 183  RRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKET 362
            + D EDEK D+LVREY+ +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+VKE 
Sbjct: 184  KEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKEN 243

Query: 363  LKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFAN 542
            L++DLGRE TD E+A A N +  +LRK+LEVGRAARNKLIKHNLRLVLFVMNKYFQDFAN
Sbjct: 244  LQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFAN 303

Query: 543  GPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLES 722
            G RFQDLCQAGVKGL+TAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV FGLES
Sbjct: 304  GSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLES 363

Query: 723  VRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEF 902
            +RVEIQ+AK EL F+LQRIPT EEII RVG+SPERYHEVM+ SKP+ SLH R++ TQEE 
Sbjct: 364  IRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEEL 423

Query: 903  INAITD---VEGDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGN 1073
            IN ITD   V+GD R+QPA             KPKESLVIRQRYGLDGKGDRTLGEIAGN
Sbjct: 424  INGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGN 483

Query: 1074 LNISREMVRKYEVKALMKLKHPARVDYLRHYIY 1172
            LNISREMVRK+EVKALMKLKHP RVDY+R YI+
Sbjct: 484  LNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  533 bits (1372), Expect = e-149
 Identities = 277/393 (70%), Positives = 316/393 (80%), Gaps = 7/393 (1%)
 Frame = +3

Query: 15   RRLNLDKRI---SMRVTKEKAVSLVRSQRK-GRRLNLDKRISMRVTKECEFVALAQNKKH 182
            RR    KRI        KE   ++V+++RK  +RLNLD+RI++   KE + +A ++ +K 
Sbjct: 124  RRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKL 183

Query: 183  RRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKET 362
              D EDEK D+LVREY+ +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+VKE 
Sbjct: 184  NEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKEN 243

Query: 363  LKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFAN 542
            L++DLGRE TD E+A A N +  +LRK+LE GRAARNKLIKHNLRLVLFVMNKYFQDFAN
Sbjct: 244  LQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFAN 303

Query: 543  GPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLES 722
              RFQDLCQAGVKGL+TAIDRFEP RKFRLSTYGLFWIRHAI+R MT SSFTKV FGLES
Sbjct: 304  ASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLES 363

Query: 723  VRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEF 902
            +RVEIQ+AK EL F+LQRIPT +EII+RVG SPERYHEVM+ SKPI SLH R++ TQEE 
Sbjct: 364  IRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEEL 423

Query: 903  INAITD---VEGDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGN 1073
            IN ITD   V+GD R+QPA             KPKESLVIRQRYGLDGKGDRTLGEIAGN
Sbjct: 424  INGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGN 483

Query: 1074 LNISREMVRKYEVKALMKLKHPARVDYLRHYIY 1172
            LNISREMVRK+EVKALMKLKHP RVDY+R YI+
Sbjct: 484  LNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  530 bits (1366), Expect = e-148
 Identities = 269/370 (72%), Positives = 315/370 (85%), Gaps = 4/370 (1%)
 Frame = +3

Query: 72   SLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 248
            ++VR++ +K +RL+L+KR++++  K+ + ++    K+  R +E+EK + LVREY++STDL
Sbjct: 149  TVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTSTDL 208

Query: 249  VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 428
            VSLDWKKMKIPPVL SSEHAWLFKLMQPMK +L+VKE L+ DLGRE T+ ELA A N  V
Sbjct: 209  VSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSV 268

Query: 429  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 608
            VQ++K LEVGRAAR+KLIKHNLRLVLFVMNKYFQDFANGP+FQDLCQAGVKGL+TAIDRF
Sbjct: 269  VQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRF 328

Query: 609  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 788
            EP+R FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESVR EIQ+AK  + F L+R+PT 
Sbjct: 329  EPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTE 388

Query: 789  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXX 959
            +EIIE+VGISPERYHEVMRASKP+ SLH RH  TQEEFIN ITD   VEGD+R++PA   
Sbjct: 389  DEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLR 448

Query: 960  XXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 1139
                      KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP
Sbjct: 449  LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 508

Query: 1140 ARVDYLRHYI 1169
            ARVDYLR Y+
Sbjct: 509  ARVDYLRRYV 518


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  530 bits (1364), Expect = e-148
 Identities = 279/396 (70%), Positives = 320/396 (80%), Gaps = 9/396 (2%)
 Frame = +3

Query: 9    KGRRLNLDKRISMRVTKEKAVS-----LVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQ 170
            KGRR    +R   + + EK V+     +VR+Q  + +RL+LD RI+++  +E + V   +
Sbjct: 124  KGRR---QRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 171  NKKHRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 350
             KK   ++E EK DRLVR+Y++STDLVSLDW+KMKIPPVLPS EH WLFKLMQPMK +L+
Sbjct: 181  RKKSS-ENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239

Query: 351  VKETLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 530
             KE L+ DLGR+ T+DELA A N    Q+RK LEVG+AARNKLIKHNLRLVLF +NKYFQ
Sbjct: 240  AKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQ 299

Query: 531  DFANGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 710
            DFANGPRFQDLCQAGVKGL+TAIDRFEPRR+FRLSTY LFWIRHAI+RSMTLSSFT+VSF
Sbjct: 300  DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF 359

Query: 711  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 890
            GLESVRVEIQRAK EL F+L R PT EEII++VGISPERY EVMRASKP+ SLH RH VT
Sbjct: 360  GLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVT 419

Query: 891  QEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1061
            QEEFIN ITD++   GD RRQPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1062 IAGNLNISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            IAGNLNISREMVRK+EVKALMKLKHPARVDYLR Y+
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  528 bits (1361), Expect = e-147
 Identities = 277/391 (70%), Positives = 322/391 (82%), Gaps = 2/391 (0%)
 Frame = +3

Query: 3    QRKGRRLNLDKRISMRVTKEKAVSLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKK 179
            QRK +    D++   R ++    ++VR++ +K +RL+LDKRI+++  +E E V   + KK
Sbjct: 115  QRKRKTGEGDEKAENRTSR----TIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKK 170

Query: 180  HRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKE 359
              +DD +EK + LVR Y++ST+LVSLDW+KMKIPPVLPS+EHAWLFKLMQPMK +L VK 
Sbjct: 171  DSKDD-NEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKA 229

Query: 360  TLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFA 539
             L+ +LGR+ TD ELA A N  V ++RKQLEVGRAARNKLIKHNLRLV+FVMNKYFQDFA
Sbjct: 230  DLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFA 289

Query: 540  NGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 719
            NGPRFQDLCQAGVKGL+TAIDRFEP+R+F+LSTY LFWIRHAI+RSMTLSSFTKVSFGLE
Sbjct: 290  NGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLE 349

Query: 720  SVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEE 899
            SVR EIQ+AK EL  +LQR PT EEIIERVGIS ERYHEV+RA+KP  SLH RH VTQEE
Sbjct: 350  SVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEE 409

Query: 900  FINAITDVE-GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNL 1076
            FIN ITD++ GD+RRQPA             KPKESLVIRQRYGLDGKGDRTLGEIAGNL
Sbjct: 410  FINGITDIDGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 469

Query: 1077 NISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            NISREMVRKYEVKALMKLKHPARVDYLR Y+
Sbjct: 470  NISREMVRKYEVKALMKLKHPARVDYLRRYV 500


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  528 bits (1359), Expect = e-147
 Identities = 279/396 (70%), Positives = 326/396 (82%), Gaps = 7/396 (1%)
 Frame = +3

Query: 6    RKGRRLNLDKRISM---RVTKEKAVSLVR-SQRKGRRLNLDKRISMRVTKECEFVALAQN 173
            R+GR+    KR+++   +  KE + ++VR   +K +RL+L+KRI++   K+ + VA  Q 
Sbjct: 126  RRGRQRR--KRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQK 183

Query: 174  KKHRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKV 353
            K+  ++ EDE  D LVREY++STDLVSLDWKKMKIPPVLP SEHAWLFKLMQPMK +L+V
Sbjct: 184  KRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEV 242

Query: 354  KETLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQD 533
            K+ L+ DLGRE TD ELA A++   VQ+R+ +EVG+AARNKLIKHNLRLVLFV+NKYFQ+
Sbjct: 243  KDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQE 302

Query: 534  FANGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 713
            FANGP+FQDLCQAGVKGL+TAIDRFEP+R FRLSTYGLFWIRHAI+RSMTLSSFT+VSFG
Sbjct: 303  FANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFG 362

Query: 714  LESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQ 893
            LESVRVEIQRAK EL FKLQR+PT EEIIE+VGISPERYHEVMRASK + SLH RH  TQ
Sbjct: 363  LESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQ 422

Query: 894  EEFINAITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEI 1064
            EE+IN ITDVE   GD  RQ A             KPKESLV+RQRYGLDGKGDRTLGEI
Sbjct: 423  EEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEI 482

Query: 1065 AGNLNISREMVRKYEVKALMKLKHPARVDYLRHYIY 1172
            AGNL+ISREMVRK+EVKALMKLKHPARVDYLR YI+
Sbjct: 483  AGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  525 bits (1352), Expect = e-146
 Identities = 269/392 (68%), Positives = 319/392 (81%), Gaps = 3/392 (0%)
 Frame = +3

Query: 3    QRKGRRLNLDKRISMRVTKEKAVSLVRSQRKGRRLNLDKRISMRVTKECEFVALAQNKKH 182
            +R+ +   +D ++  R + +  V  V   +K +RL+LDKR++++  K+ +  A    K+ 
Sbjct: 130  KRRKKISEVDDKVEKRTSDDIVVRSVT--KKAKRLSLDKRVALKWNKDEKVAASVVRKRK 187

Query: 183  RRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKET 362
             +  E+E  + LVREY++STDLVSLDWKKM+IPPVL SSEH WLFKLMQPMK +L+VKE 
Sbjct: 188  DKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEI 247

Query: 363  LKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFAN 542
            L+ DLGRE    ELA A N  VVQ+++ LEVGRAARNKLIKHNLRLVLFV+NKYFQDFAN
Sbjct: 248  LQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFAN 307

Query: 543  GPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLES 722
            GP+FQDLCQAGVKGL+TAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLES
Sbjct: 308  GPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLES 367

Query: 723  VRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEF 902
            VR EIQ+AK E+  +L+R+PT +EIIE+VGISPERYHEVMRASKP+ SL+ RH VTQEEF
Sbjct: 368  VRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEF 427

Query: 903  INAITD---VEGDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGN 1073
            IN ITD   V+GD+RR+PA             KPKESLVIRQRYGLDGKGDRTLGEIAGN
Sbjct: 428  INGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGN 487

Query: 1074 LNISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            LNISREMVRK+EVKALMKLKHPARVDYLR YI
Sbjct: 488  LNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  524 bits (1349), Expect = e-146
 Identities = 267/383 (69%), Positives = 313/383 (81%), Gaps = 3/383 (0%)
 Frame = +3

Query: 30   DKRISMRVTKEKAVSLVRSQRKGRRLNLDKRISMRVTKECEFVALAQNKKHRRDDEDEKT 209
            D+R   + T    V   R ++K +RL+L KR+ ++  KE     +   K+    +E+EK 
Sbjct: 135  DERAGKKSTTSDTVVRNR-KKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEEEKI 193

Query: 210  DRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGREL 389
            ++LVREY++STDLVSLDWKKMKIPPVLPSSEH WLFKLMQP+K++ +V E L+  LGRE 
Sbjct: 194  EKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREP 253

Query: 390  TDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQ 569
            T++ELA A N  VVQ+++ LE GRAARNKLIKHNLRLVLFVMNKYFQDF NGP+FQDLCQ
Sbjct: 254  TENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQ 313

Query: 570  AGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAK 749
            AGV+GL+TAIDRFEP+R+FRLSTYGLFWIRHAI+RSMT+SSFT+VSFGLESVR EIQ+AK
Sbjct: 314  AGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAK 373

Query: 750  QELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD--- 920
             EL F+L+R+PT EEIIE+VGISPERYHEVMRASKP+ SL+ RH  TQEEFINAITD   
Sbjct: 374  IELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDG 433

Query: 921  VEGDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 1100
            V+GD RR+PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR
Sbjct: 434  VDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 493

Query: 1101 KYEVKALMKLKHPARVDYLRHYI 1169
            K+EVKALMKLKHPARVDYLR Y+
Sbjct: 494  KHEVKALMKLKHPARVDYLRRYM 516


>gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlisea aurea]
          Length = 488

 Score =  514 bits (1324), Expect = e-143
 Identities = 266/374 (71%), Positives = 304/374 (81%), Gaps = 5/374 (1%)
 Frame = +3

Query: 69   VSLVRSQRKG--RRLNLDKRISMRVTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSST 242
            V++VRS R    +RLNL++RIS+R+  E +  A    K   + D+D+K  RL+REY++S 
Sbjct: 115  VNIVRSTRNKTKKRLNLNERISLRMKVESDSSATIHRKNVPKSDDDQKISRLLREYSASA 174

Query: 243  DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNT 422
            DL SLDWKKMKIPPVLPSSEH WLFKLMQPMKE  KVKETLK  LGRE TD ELA A+N 
Sbjct: 175  DLSSLDWKKMKIPPVLPSSEHTWLFKLMQPMKETNKVKETLKVALGREPTDYELAEAMNM 234

Query: 423  EVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAID 602
            + V LRK++EVGRA+RNKLI+HNLRLVLFVMNKYFQDF+NGP+FQDLCQAGVKGL+TAID
Sbjct: 235  DPVPLRKRIEVGRASRNKLIRHNLRLVLFVMNKYFQDFSNGPKFQDLCQAGVKGLITAID 294

Query: 603  RFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIP 782
            RFEP+RK RLSTYGLFWIRHA+VRSMTLSSFTKVSFGLES+R EIQ+ K EL  KLQR P
Sbjct: 295  RFEPKRKSRLSTYGLFWIRHAVVRSMTLSSFTKVSFGLESIRAEIQKTKMELMVKLQRRP 354

Query: 783  TVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAIT---DVEGDSRRQPAX 953
            T EEI+ RVGIS ERY EVMR +KP+ SL+ RHE+T EEFI  I+   DVEGD R++ A 
Sbjct: 355  TDEEIMNRVGISEERYREVMRVTKPVSSLNARHELTNEEFIAGISDADDVEGDRRKELAL 414

Query: 954  XXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 1133
                        KPKE LVIRQRYGLDGKGDRTLGE+AGNLNISREMVRK+EVKALMKLK
Sbjct: 415  LRLAIDDVLDSLKPKEGLVIRQRYGLDGKGDRTLGEVAGNLNISREMVRKHEVKALMKLK 474

Query: 1134 HPARVDYLRHYIYK 1175
            HPARVDYLR YI+K
Sbjct: 475  HPARVDYLRRYIFK 488


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  512 bits (1319), Expect = e-142
 Identities = 270/391 (69%), Positives = 315/391 (80%), Gaps = 2/391 (0%)
 Frame = +3

Query: 3    QRKGRRLNLDKRISMRVTKEKAVSLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKK 179
            QRK +    DK    R  K     +VR++ +K +RL+L+KRIS+R+  E + V+ A  +K
Sbjct: 126  QRKRKISEGDKETEDRTGK----IIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRK 181

Query: 180  HRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKE 359
             R++ E+EK D LVREY++STDLVSLDWKKMKIPPVL SSEH WLFKLMQPMK +L+VKE
Sbjct: 182  DRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKE 240

Query: 360  TLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFA 539
             L+ +LG E TD ELA A N +V+Q+RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQDFA
Sbjct: 241  HLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFA 300

Query: 540  NGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 719
            NG +FQD CQAGVKGL+TAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLE
Sbjct: 301  NGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE 360

Query: 720  SVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEE 899
            S+R EIQ+AK EL F+L+R P  +EIIE+V ISPERYHEV RASKP+ SLH RH+ TQEE
Sbjct: 361  SIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEE 420

Query: 900  FINAITDVE-GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNL 1076
            FI  I DV+ GD RRQ A             KPKESLV+RQRYGLDGKGDRTLGEIAGNL
Sbjct: 421  FIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNL 480

Query: 1077 NISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            NISREMVRK+EVKALMKLKHP RVDYLR Y+
Sbjct: 481  NISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  506 bits (1303), Expect = e-141
 Identities = 269/396 (67%), Positives = 316/396 (79%), Gaps = 8/396 (2%)
 Frame = +3

Query: 6    RKGRRLNLDKRISMRVTKEKAVSLVRSQRKG-RRLNLDKRISMRVTKECEFVALAQNKKH 182
            + GR     KR S +        +VR+Q K  +RL+LDKRI+++  KE + VAL + +K 
Sbjct: 119  KDGRSKRGQKR-SKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKD 177

Query: 183  RRDDEDE----KTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 350
             +++ DE    + DRLVR+Y++STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK +++
Sbjct: 178  TKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVE 237

Query: 351  VKETLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 530
            V+E L+  LGRE T+ ELA A N  V+Q+R+QLEVGRAARNKLIKHNLRLVLFV+NKYF+
Sbjct: 238  VQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFE 297

Query: 531  DFANGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 710
            DFA+GP+FQDLCQAGVKGL+TAIDRFEP+RKFRLSTY LFWIRHAI+RSMTLSSFT+VSF
Sbjct: 298  DFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSF 357

Query: 711  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 890
            GL+SVRVEIQRAK EL  +L R+PT  EI  +VGIS ERY EVMRA+KP+ SLH RH  T
Sbjct: 358  GLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTT 417

Query: 891  QEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1061
             EE IN ITDVE   GD+RRQPA             KPKESLVIRQRYGLDGKG+RTLGE
Sbjct: 418  SEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 477

Query: 1062 IAGNLNISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            IAGNLNISREMVRK+EVKALMKLKHPARVDYLR Y+
Sbjct: 478  IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  506 bits (1302), Expect = e-140
 Identities = 271/395 (68%), Positives = 315/395 (79%), Gaps = 7/395 (1%)
 Frame = +3

Query: 6    RKGRRLNLDKRISMRVTKEKAVS---LVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQN 173
            ++GR+    KRI     K   VS   +VR+Q ++ +RL+LDKRI +R  ++ + V   + 
Sbjct: 122  KRGRQRR--KRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVT--KT 177

Query: 174  KKHRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKV 353
            +K    DE EK ++LVREY+ STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK  ++V
Sbjct: 178  RKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQV 237

Query: 354  KETLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQD 533
            KE L+ DLGRE TD ELA A N    Q++K LEVGRAARNKLIKHNLRLVLFV+ KYFQD
Sbjct: 238  KEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQD 297

Query: 534  FANGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 713
            FANGPRFQDLCQAGVKGL+TAIDRFEP+R+FRLSTYGLFWIRHAI+RSMT+SSFT+V FG
Sbjct: 298  FANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFG 357

Query: 714  LESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQ 893
            LESVR EIQRAK EL F+L+R+PT EEII+ V ISPERY EVM+ASKPI SLH RH VTQ
Sbjct: 358  LESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQ 417

Query: 894  EEFINAITDVEG---DSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEI 1064
            EEFIN ITDV+G   +++RQPA             KPKESLVIRQR+GLDGKGDRTLGEI
Sbjct: 418  EEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEI 477

Query: 1065 AGNLNISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            AGNLNISREMVRK+EVK LMKLKHP RVDYLR ++
Sbjct: 478  AGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHM 512


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  503 bits (1295), Expect = e-140
 Identities = 253/375 (67%), Positives = 307/375 (81%), Gaps = 4/375 (1%)
 Frame = +3

Query: 57   KEKAVSLVRSQRKGRRLNLDKRISM-RVTKECEFVALAQNKKHRRDDEDEKTDRLVREYT 233
            +EK V +  +  K +RL+LDKRI++ R  +E   V  AQ K  ++  E+EK +RLVR+Y+
Sbjct: 136  EEKKVVVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEEEKIERLVRDYS 195

Query: 234  SSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVA 413
            +S D+VSLDWKKMKIPPVLPS+EHAWLFKLMQPMK +L+VK+ L+  LGRE  + E+A  
Sbjct: 196  ASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLGREPRETEIAGE 255

Query: 414  VNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMT 593
            +N    ++++++E+GRAARNKLIKHNLRLVLFVMNKYFQDF NGP+FQDLCQAG++GL+T
Sbjct: 256  INMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGMRGLIT 315

Query: 594  AIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQ 773
            AIDRFEP+RKFRLSTYGLFWIRHAI+RSMT S+FT+V FGLESVRVEI + K EL F+L 
Sbjct: 316  AIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKTKMELLFELG 375

Query: 774  RIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVEG---DSRRQ 944
            R+PT +E++ER+ ISPERY EV+RA+KP+ SL+ +H VTQEEFIN ITDV+G   D+RRQ
Sbjct: 376  RLPTEDEVVERLKISPERYREVLRAAKPVFSLNSKHSVTQEEFINGITDVDGVGADNRRQ 435

Query: 945  PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALM 1124
            PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALM
Sbjct: 436  PAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALM 495

Query: 1125 KLKHPARVDYLRHYI 1169
            KLKH ARVDYLR YI
Sbjct: 496  KLKHQARVDYLRQYI 510


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  498 bits (1282), Expect = e-138
 Identities = 267/398 (67%), Positives = 314/398 (78%), Gaps = 10/398 (2%)
 Frame = +3

Query: 6    RKGRRLNLDKRISMRVTKEKAVSLVRSQRKG-RRLNLDKRISMRV------TKECEFVAL 164
            + GR     KR S +        +VR+Q K  +RL+LDKRI+++        KE + V  
Sbjct: 119  KDGRSKRGQKR-SKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPS 177

Query: 165  AQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEI 344
             + +K  ++++DE  DRLVR+Y++STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK +
Sbjct: 178  LRKQKETKNEDDE-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKAL 236

Query: 345  LKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 524
            ++V+E L+  LGRE T+ ELA A N  V+Q+R+QLEVGRAARNKLIKHNLRLVLFV+NKY
Sbjct: 237  VEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKY 296

Query: 525  FQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 704
            F+DFA+GP+FQDLCQAGVKGL+TAIDRFEP+RKFRLSTY LFWIRHAI+RSMTLSSFT+V
Sbjct: 297  FEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRV 356

Query: 705  SFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHE 884
            SFGL+SVRVEIQRAK EL  +L R+PT  EI  +VGIS ERY EVMRA+KP+ SLH RH 
Sbjct: 357  SFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHS 416

Query: 885  VTQEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1055
             T EE IN ITDVE   GD+RRQPA             KPKESLVIRQRYGLDGKG+RTL
Sbjct: 417  TTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTL 476

Query: 1056 GEIAGNLNISREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            GEIAGNLNISREMVRK+EVKALMKLKHPARVDYLR Y+
Sbjct: 477  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, partial [Capsella rubella]
            gi|482556108|gb|EOA20300.1| hypothetical protein
            CARUB_v10000608mg, partial [Capsella rubella]
          Length = 557

 Score =  498 bits (1281), Expect = e-138
 Identities = 252/375 (67%), Positives = 307/375 (81%), Gaps = 4/375 (1%)
 Frame = +3

Query: 57   KEKAVSLVRSQRKGRRLNLDKRISM-RVTKECEFVALAQNKKHRRDDEDEKTDRLVREYT 233
            +EK V +  + +K +RL+LDKRI++ R  +E  FVA A+ K  ++  E+EK D LVR+Y+
Sbjct: 182  EEKKVVVRNNVKKDKRLSLDKRIALKRNCQEKPFVASAEKKVTKKQQEEEKIDMLVRDYS 241

Query: 234  SSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVA 413
             S D++SLDWKKMKIPPVL S+EHAWLFKLMQPMK +L+VK+ L+  LGRE  + E+A  
Sbjct: 242  VSNDILSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLEVKDELQKSLGREPREAEIAGE 301

Query: 414  VNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMT 593
            +     +++K++E+GRAARNKLIKHNLRLVLFVMNKYFQ+F NGP+FQDLCQAG+KGL+T
Sbjct: 302  IKMTTGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFQEFTNGPKFQDLCQAGMKGLIT 361

Query: 594  AIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQ 773
            AIDRFEP+RKFRLSTYGLFWIRHAI+RSMT S+FT+V FGLESVRVEI +AK EL F+L 
Sbjct: 362  AIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKMELLFELG 421

Query: 774  RIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVEG---DSRRQ 944
            R+PT +E+I+R+ I+PERY EV+RA+KP+ SL+ +H VTQEEFIN ITDV+G   D+RRQ
Sbjct: 422  RLPTEDEVIKRLKITPERYREVLRAAKPVFSLNSKHAVTQEEFINGITDVDGVGADNRRQ 481

Query: 945  PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALM 1124
            PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALM
Sbjct: 482  PALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALM 541

Query: 1125 KLKHPARVDYLRHYI 1169
            KLKH ARVDYLR YI
Sbjct: 542  KLKHQARVDYLRQYI 556


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  495 bits (1275), Expect = e-137
 Identities = 257/389 (66%), Positives = 313/389 (80%), Gaps = 4/389 (1%)
 Frame = +3

Query: 15   RRLNLDKRISMRVTKEKAVSLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKKHRRD 191
            R L   K++S         ++VR+Q +K +RL+LDKRI+++   + E +   Q K++ ++
Sbjct: 101  RVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKN 160

Query: 192  DEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKS 371
               +  D L+R+Y++STDLVS+DWKKMKIPPVLPSSEHAWLFKLMQPMK +L+ KE LK 
Sbjct: 161  -RVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK- 218

Query: 372  DLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPR 551
            ++ +E+T  ELA A N  ++Q+RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDFA+GPR
Sbjct: 219  EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPR 278

Query: 552  FQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRV 731
            FQDLCQAGVKGL+TAIDRFEP+R+ +LSTY LFWIRH+IVRS+TLSSFT+V FGLE VRV
Sbjct: 279  FQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRV 338

Query: 732  EIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINA 911
            +IQR K +L F+LQR PT EE++ER+GIS ERYHEVM+ASKPI SLH RH  TQEE+IN 
Sbjct: 339  DIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYING 398

Query: 912  ITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI 1082
            ITDV+   GD+RRQ A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
Sbjct: 399  ITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI 458

Query: 1083 SREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            SRE+VRK+EVKALMKLKHPAR+DYLR Y+
Sbjct: 459  SREIVRKHEVKALMKLKHPARLDYLRRYV 487


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  495 bits (1275), Expect = e-137
 Identities = 257/389 (66%), Positives = 313/389 (80%), Gaps = 4/389 (1%)
 Frame = +3

Query: 15   RRLNLDKRISMRVTKEKAVSLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKKHRRD 191
            R L   K++S         ++VR+Q +K +RL+LDKRI+++   + E +   Q K++ ++
Sbjct: 125  RVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKN 184

Query: 192  DEDEKTDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKS 371
               +  D L+R+Y++STDLVS+DWKKMKIPPVLPSSEHAWLFKLMQPMK +L+ KE LK 
Sbjct: 185  -RVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK- 242

Query: 372  DLGRELTDDELAVAVNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPR 551
            ++ +E+T  ELA A N  ++Q+RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDFA+GPR
Sbjct: 243  EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPR 302

Query: 552  FQDLCQAGVKGLMTAIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRV 731
            FQDLCQAGVKGL+TAIDRFEP+R+ +LSTY LFWIRH+IVRS+TLSSFT+V FGLE VRV
Sbjct: 303  FQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRV 362

Query: 732  EIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINA 911
            +IQR K +L F+LQR PT EE++ER+GIS ERYHEVM+ASKPI SLH RH  TQEE+IN 
Sbjct: 363  DIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYING 422

Query: 912  ITDVE---GDSRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI 1082
            ITDV+   GD+RRQ A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
Sbjct: 423  ITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI 482

Query: 1083 SREMVRKYEVKALMKLKHPARVDYLRHYI 1169
            SRE+VRK+EVKALMKLKHPAR+DYLR Y+
Sbjct: 483  SREIVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
            gi|561034810|gb|ESW33340.1| hypothetical protein
            PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  493 bits (1270), Expect = e-137
 Identities = 253/370 (68%), Positives = 310/370 (83%), Gaps = 4/370 (1%)
 Frame = +3

Query: 72   SLVRSQ-RKGRRLNLDKRISMRVTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 248
            S+VR+Q +K +RL+LDKRI+++   + E +  AQ K  R  +  E  D L+REY++STDL
Sbjct: 144  SVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKK--RDVNRIENIDALIREYSASTDL 201

Query: 249  VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 428
            VS+DWKK+KIPPVLPSSEHAWLFKLM+PMKE+L+V+E L+ ++G+E++D ELA A +  V
Sbjct: 202  VSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGKEISDGELADANSISV 260

Query: 429  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 608
            +Q+RK LEVG+AARNKLIKHNLRLVLFV+NKYFQDFA+GPRFQDLCQAGVKGL+TAIDRF
Sbjct: 261  IQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRF 320

Query: 609  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 788
            E +R+ +LSTY LFWIRH+IVRS+TLSS T+V FGL+ VR +I RAK EL+F+LQR PT 
Sbjct: 321  ESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHRAKLELRFELQRSPTE 380

Query: 789  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXX 959
            +E++ER+GISPERY++V++ASKPI SLH RH VTQEEFIN ITD   V+GD+RRQ A   
Sbjct: 381  KEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDLDGVDGDNRRQLAVLR 440

Query: 960  XXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 1139
                      KPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP
Sbjct: 441  LALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 500

Query: 1140 ARVDYLRHYI 1169
            AR+DYLR Y+
Sbjct: 501  ARLDYLRRYV 510