BLASTX nr result
ID: Mentha27_contig00034435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha27_contig00034435 (663 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 229 3e-60 emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 235 6e-60 gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 232 8e-60 gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 229 1e-59 gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 228 2e-59 gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja... 226 7e-59 gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subc... 226 7e-59 emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 232 9e-59 emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 232 9e-59 gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 226 1e-58 gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] 227 1e-58 gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 228 2e-58 emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 224 7e-58 gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 229 8e-58 gb|AAB82754.1| retrofit [Oryza longistaminata] 223 1e-57 gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho... 225 1e-57 gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc... 225 1e-57 gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz... 225 1e-57 gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 222 1e-57 gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 224 1e-57 >gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group] gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1431 Score = 229 bits (583), Expect(2) = 3e-60 Identities = 107/201 (53%), Positives = 143/201 (71%), Gaps = 2/201 (0%) Frame = -3 Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 P++++ KLS + G F D + YRS +GALQYLTLTRPD++F+VNK+ Q+LHAP+ HW Sbjct: 1189 PLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHW 1248 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 A KR+LRYLK T +GLK SKS+S + AFSDADWAGC D+R STGG +F NLV W Sbjct: 1249 AAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSW 1308 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 +++K VSRSS E+EY++LAN T +++W+ +L ELG+ +WCDN + +N Sbjct: 1309 SARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTAN 1368 Query: 112 PVFHARTKHIEVDVTLFGKRL 50 PVFHARTKHIEVD +R+ Sbjct: 1369 PVFHARTKHIEVDYHFVRERV 1389 Score = 30.0 bits (66), Expect(2) = 3e-60 Identities = 12/23 (52%), Positives = 19/23 (82%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA KF+ V ++++ +QV Sbjct: 1383 HFVRERVARKFLQVEYISTKDQV 1405 >emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] Length = 1002 Score = 235 bits (599), Expect(2) = 6e-60 Identities = 113/205 (55%), Positives = 149/205 (72%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482 +P PM+ KL SG +FSDP+LYRSTIGALQYLT TRPDIAF VNKLSQ+L P+ Sbjct: 754 KPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTE 813 Query: 481 DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302 HW ACKR+LRYLKG GL F+ +SS L+ ++DADWA D+RRST G+C+F +NL Sbjct: 814 LHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNL 873 Query: 301 VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122 W+S+K +V+RSS ++EYR+LA+ + ++ WL SL ELG+S+ +WCDN +L Sbjct: 874 FTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGAL 933 Query: 121 ASNPVFHARTKHIEVDVTLFGKRLL 47 A+NPVFH+RTKHIEVDV +++L Sbjct: 934 AANPVFHSRTKHIEVDVXYVREQVL 958 Score = 22.7 bits (47), Expect(2) = 6e-60 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 68 FVREKVASKFVDVGHVTSIEQ 6 +VRE+V K + V +V S+EQ Sbjct: 952 YVREQVLDKKLVVSYVPSVEQ 972 >gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] Length = 1621 Score = 232 bits (592), Expect(2) = 8e-60 Identities = 114/207 (55%), Positives = 144/207 (69%), Gaps = 2/207 (0%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++V+ KLS + G D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP Sbjct: 929 KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 988 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW+A KR+LRYLK +GL+ KS S + FSDADWAGC D+RRSTGG IF S Sbjct: 989 TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1048 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV WN++K VSRSS ESEY+++AN T +++W+ +L EL + +WCDN Sbjct: 1049 NLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1108 Query: 127 SLASNPVFHARTKHIEVDVTLFGKRLL 47 L++NPVFHARTKHIEVD +RLL Sbjct: 1109 YLSANPVFHARTKHIEVDYHFVRERLL 1135 Score = 25.0 bits (53), Expect(2) = 8e-60 Identities = 8/15 (53%), Positives = 14/15 (93%) Frame = -2 Query: 71 HFVREKVASKFVDVG 27 HFVRE++ S+F+++G Sbjct: 1128 HFVRERLLSRFINLG 1142 >gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1460 Score = 229 bits (585), Expect(2) = 1e-59 Identities = 112/206 (54%), Positives = 143/206 (69%), Gaps = 2/206 (0%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++V+ KLS + G D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP Sbjct: 1207 KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 1266 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW+A KR+LRYLK +GL+ KS S + FSDADWAGC D+RRSTGG IF S Sbjct: 1267 TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1326 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV WN++K VSRSS ESEY+++AN T +++W+ +L EL + +WCDN Sbjct: 1327 NLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1386 Query: 127 SLASNPVFHARTKHIEVDVTLFGKRL 50 L++NPVFHARTKHIEVD +R+ Sbjct: 1387 YLSANPVFHARTKHIEVDYHFVRERV 1412 Score = 26.9 bits (58), Expect(2) = 1e-59 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+V+ K +++ V++ +QV Sbjct: 1406 HFVRERVSQKLLEIDFVSTNDQV 1428 >gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|31433472|gb|AAP54977.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1031 Score = 228 bits (582), Expect(2) = 2e-59 Identities = 108/201 (53%), Positives = 144/201 (71%), Gaps = 2/201 (0%) Frame = -3 Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 P++++ KLS + G D + YRS +GALQYLTLTRPD++F+VNK+ Q+LHA + HW Sbjct: 789 PLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHW 848 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 VA KR+LRYLK T +GLK SKS+S + AFSDADWAGC D+RRSTGG +F NLV W Sbjct: 849 VAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 908 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 +++K VSRSS E+EY++LAN T +++W+ +L ELG+ V +WCDN + +N Sbjct: 909 SARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTAN 968 Query: 112 PVFHARTKHIEVDVTLFGKRL 50 PVFHARTKHIEVD +R+ Sbjct: 969 PVFHARTKHIEVDYHFVRERV 989 Score = 27.7 bits (60), Expect(2) = 2e-59 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K + V ++++ +QV Sbjct: 983 HFVRERVARKLLQVEYISTKDQV 1005 >gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group] Length = 1096 Score = 226 bits (576), Expect(2) = 7e-59 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 2/201 (0%) Frame = -3 Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 P++++ KLS Y G D + YRS +GAL YLTLTRPD++F+VNK+ Q+LHAP+ +HW Sbjct: 856 PLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTTEHW 915 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 A KR+LRYLK T +GLK KS+S + AFSDADWAGC D+RRSTGG +F NLV W Sbjct: 916 AAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 975 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 +++K VSRSS E+EY++L N T +++W+ +L ELG+ V +WCDN + +N Sbjct: 976 SARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIAN 1035 Query: 112 PVFHARTKHIEVDVTLFGKRL 50 PVF+ARTKHIEVD +R+ Sbjct: 1036 PVFYARTKHIEVDYHFVRERV 1056 Score = 28.1 bits (61), Expect(2) = 7e-59 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K + V ++++ +QV Sbjct: 1050 HFVRERVAQKLLQVEYISTNDQV 1072 >gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 658 Score = 226 bits (576), Expect(2) = 7e-59 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 2/201 (0%) Frame = -3 Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 P++++ KLS Y G D + YRS +GAL YLTLTRPD++F+VNK+ Q+LHAP+ +HW Sbjct: 77 PLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTTEHW 136 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 A KR+LRYLK T +GLK KS+S + AFSDADWAGC D+RRSTGG +F NLV W Sbjct: 137 AAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 196 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 +++K VSRSS E+EY++L N T +++W+ +L ELG+ V +WCDN + +N Sbjct: 197 SARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIAN 256 Query: 112 PVFHARTKHIEVDVTLFGKRL 50 PVF+ARTKHIEVD +R+ Sbjct: 257 PVFYARTKHIEVDYHFVRERV 277 Score = 28.1 bits (61), Expect(2) = 7e-59 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K + V ++++ +QV Sbjct: 271 HFVRERVAQKLLQVEYISTNDQV 293 >emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] Length = 1271 Score = 232 bits (591), Expect(2) = 9e-59 Identities = 110/197 (55%), Positives = 143/197 (72%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482 +P P + LS GE FSD +LYRST+GALQYLTLTRPDI+F VNK QF+ P+ Sbjct: 974 KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTT 1033 Query: 481 DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302 HW+A KR+LRYLKGT + G++ +S+S + ++DADWA C D+RRSTGG+ IF NL Sbjct: 1034 THWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNL 1093 Query: 301 VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122 V W+S K +VSRSSAESEYR+LA+ T +++W+ + EL +S +P LWCDN S L Sbjct: 1094 VSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHL 1153 Query: 121 ASNPVFHARTKHIEVDV 71 A+NPVFHARTKHIE+D+ Sbjct: 1154 AANPVFHARTKHIEMDL 1170 Score = 21.9 bits (45), Expect(2) = 9e-59 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HF+R+ V K + + ++ S EQV Sbjct: 1171 HFIRDHVLRKQLVIQYLPSAEQV 1193 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 232 bits (591), Expect = 9e-59 Identities = 110/197 (55%), Positives = 143/197 (72%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482 +P P + LS GE FSD +LYRST+GALQYLTLTRPDI+F VNK QF+ P+ Sbjct: 1116 KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTT 1175 Query: 481 DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302 HW+A KR+LRYLKGT + G++ +S+S + ++DADWA C D+RRSTGG+ IF NL Sbjct: 1176 THWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNL 1235 Query: 301 VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122 V W+S K +VSRSSAESEYR+LA+ T +++W+ + EL +S +P LWCDN S L Sbjct: 1236 VSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHL 1295 Query: 121 ASNPVFHARTKHIEVDV 71 A+NPVFHARTKHIE+D+ Sbjct: 1296 AANPVFHARTKHIEMDL 1312 >gb|ACY72569.1| unknown [Oryza sativa Japonica Group] Length = 1436 Score = 226 bits (577), Expect(2) = 1e-58 Identities = 107/206 (51%), Positives = 146/206 (70%), Gaps = 2/206 (0%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P + P++V+ KL+ Y G +D + YRS +GALQYLTLTRPDIA++VNK+ QFLHAP Sbjct: 1190 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1249 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + DHW A KR+LRYL ++GL KS+S + +SDADWAG D+R+STGG +F S Sbjct: 1250 TTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGS 1309 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV W+++K VSRSS E+EY+++ANTT +L+W+ +L ELG+ +WCDN Sbjct: 1310 NLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAK 1369 Query: 127 SLASNPVFHARTKHIEVDVTLFGKRL 50 L++NPVFHARTKHIEVD +R+ Sbjct: 1370 YLSANPVFHARTKHIEVDYHFVRERV 1395 Score = 26.9 bits (58), Expect(2) = 1e-58 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+V+ K +++ V S +QV Sbjct: 1389 HFVRERVSQKLLEIDFVPSGDQV 1411 >gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] Length = 1012 Score = 227 bits (579), Expect(2) = 1e-58 Identities = 108/205 (52%), Positives = 140/205 (68%), Gaps = 2/205 (0%) Frame = -3 Query: 658 PCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPS 485 P P+ + KLS G D + Y S +GALQYLTLTRPDI+F VNK+ QFLH+P+ Sbjct: 767 PVDTPLCSSEKLSIEDGNKLGSEDATKYCSVVGALQYLTLTRPDISFAVNKVCQFLHSPT 826 Query: 484 ADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSN 305 HW A KR+LRY+KGT +G+KFSKS S + AF+DADWAGC D+RRSTGG +F +N Sbjct: 827 TIHWSAVKRILRYIKGTTKLGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLGNN 886 Query: 304 LVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVS 125 L+ W +KK VSRSS E+EY++LAN T +++W+ L ELGV LWCDN Sbjct: 887 LISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNLGATY 946 Query: 124 LASNPVFHARTKHIEVDVTLFGKRL 50 L++NP+FHARTKHIE+D +R+ Sbjct: 947 LSANPIFHARTKHIEIDFHFVRERV 971 Score = 26.2 bits (56), Expect(2) = 1e-58 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K ++V +++ +Q+ Sbjct: 965 HFVRERVAQKLLEVRFISTGDQL 987 >gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa] gi|31430072|gb|AAP52036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1058 Score = 228 bits (582), Expect(2) = 2e-58 Identities = 108/193 (55%), Positives = 137/193 (70%), Gaps = 2/193 (1%) Frame = -3 Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 P++ KLS Y GE D + YRS +GALQYLTLTRPDI+F+VNK+ QFL P+ HW Sbjct: 810 PLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISFSVNKVCQFLQNPTTVHW 869 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 KR+LRY+KGT +GLK KSSS + A+SDADWA C D++RSTGG +F SNL+ W Sbjct: 870 ATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNLISW 929 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 N++K VSRSS E+EY++LAN T +++W+ L ELG+S P LWCDN L+ N Sbjct: 930 NARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYLSVN 989 Query: 112 PVFHARTKHIEVD 74 PVFHARTKHIE+D Sbjct: 990 PVFHARTKHIEID 1002 Score = 24.3 bits (51), Expect(2) = 2e-58 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K + + V S +QV Sbjct: 1004 HFVREQVAQKQLALQFVPSQDQV 1026 >emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] Length = 431 Score = 224 bits (572), Expect(2) = 7e-58 Identities = 110/202 (54%), Positives = 138/202 (68%) Frame = -3 Query: 652 AMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473 A PMA LS G DP+LYRS +GALQY T+TRPDIA+TVNKL QF+HAP++ H Sbjct: 79 ASPMAAGPVLSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTSTHL 138 Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293 KR+LRYLKG+ GL F SSS L A++DADWA C D+RRST G+CIFF NLV W Sbjct: 139 QVVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVSW 198 Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113 ++ K +VSRSS ESEYR LAN +L W+ SL EL + + P L+CDN S LA+N Sbjct: 199 SASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAAN 258 Query: 112 PVFHARTKHIEVDVTLFGKRLL 47 P+ H+R KH+E+D +R+L Sbjct: 259 PILHSRAKHVEIDYHFVRERVL 280 Score = 26.2 bits (56), Expect(2) = 7e-58 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+V K +DV + S +QV Sbjct: 273 HFVRERVLQKTLDVRFLPSEDQV 295 >gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1478 Score = 229 bits (583), Expect = 8e-58 Identities = 111/198 (56%), Positives = 140/198 (70%), Gaps = 2/198 (1%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++V+ KLS + G D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP Sbjct: 1200 KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 1259 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW+A KR+LRYLK +GL+ KS S + FSDADWAGC D+RRSTGG IF S Sbjct: 1260 TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1319 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV WN++K VSRSS ESEY+++AN T +++W+ +L EL + +WCDN Sbjct: 1320 NLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1379 Query: 127 SLASNPVFHARTKHIEVD 74 L++NPVFHARTKHIEVD Sbjct: 1380 YLSANPVFHARTKHIEVD 1397 >gb|AAB82754.1| retrofit [Oryza longistaminata] Length = 1445 Score = 223 bits (569), Expect(2) = 1e-57 Identities = 106/206 (51%), Positives = 145/206 (70%), Gaps = 2/206 (0%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P + P++V+ KL+ Y G +D YRS +GALQYLTLTRPDIA++VNK+ QFLHAP Sbjct: 1199 KPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1258 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW+A KR+LRYL ++GL KS+S + +SDADWAG D+R+STGG +F S Sbjct: 1259 TTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGS 1318 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV W+++K VSRSS E+EY+++ANTT +L+W+ +L ELG+ +WCDN Sbjct: 1319 NLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAK 1378 Query: 127 SLASNPVFHARTKHIEVDVTLFGKRL 50 L++NPVFHARTKHIEVD +R+ Sbjct: 1379 YLSANPVFHARTKHIEVDYHFVRERV 1404 Score = 26.9 bits (58), Expect(2) = 1e-57 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+V+ K +++ V S +QV Sbjct: 1398 HFVRERVSQKLLEIDFVPSGDQV 1420 >gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa Japonica Group] Length = 1150 Score = 225 bits (573), Expect(2) = 1e-57 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++ + KLS G D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P Sbjct: 818 KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 877 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW A KR++RYL+GT +GLK KS S + AFSDADWAGC D+RRST G +F S Sbjct: 878 TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 937 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NL+ W+ +K VSRSS E+EY++LAN T +++W+ +L ELG+ + LWCDN Sbjct: 938 NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 997 Query: 127 SLASNPVFHARTKHIEV 77 L++NP+FHARTKHIEV Sbjct: 998 YLSANPIFHARTKHIEV 1014 Score = 25.4 bits (54), Expect(2) = 1e-57 Identities = 8/22 (36%), Positives = 17/22 (77%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQ 6 HFVRE+VA K +++ +++++ Sbjct: 1017 HFVRERVAQKLLEIEGASAVDE 1038 >gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1142 Score = 225 bits (573), Expect(2) = 1e-57 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++ + KLS G D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P Sbjct: 780 KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 839 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW A KR++RYL+GT +GLK KS S + AFSDADWAGC D+RRST G +F S Sbjct: 840 TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 899 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NL+ W+ +K VSRSS E+EY++LAN T +++W+ +L ELG+ + LWCDN Sbjct: 900 NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 959 Query: 127 SLASNPVFHARTKHIEV 77 L++NP+FHARTKHIEV Sbjct: 960 YLSANPIFHARTKHIEV 976 Score = 25.4 bits (54), Expect(2) = 1e-57 Identities = 8/22 (36%), Positives = 17/22 (77%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQ 6 HFVRE+VA K +++ +++++ Sbjct: 979 HFVRERVAQKLLEIEGASAVDE 1000 >gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group] Length = 1139 Score = 225 bits (573), Expect(2) = 1e-57 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P P++ + KLS G D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P Sbjct: 786 KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 845 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW A KR++RYL+GT +GLK KS S + AFSDADWAGC D+RRST G +F S Sbjct: 846 TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 905 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NL+ W+ +K VSRSS E+EY++LAN T +++W+ +L ELG+ + LWCDN Sbjct: 906 NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 965 Query: 127 SLASNPVFHARTKHIEV 77 L++NP+FHARTKHIEV Sbjct: 966 YLSANPIFHARTKHIEV 982 Score = 25.4 bits (54), Expect(2) = 1e-57 Identities = 8/22 (36%), Positives = 17/22 (77%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQ 6 HFVRE+VA K +++ +++++ Sbjct: 985 HFVRERVAQKLLEIEGASAVDE 1006 >gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 932 Score = 222 bits (566), Expect(2) = 1e-57 Identities = 104/198 (52%), Positives = 140/198 (70%), Gaps = 2/198 (1%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P + P++ KLS G+ +D S YRS +GALQYLTLTR D++F VNK+ QFLH+P Sbjct: 688 KPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSP 747 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW A KR+LRY+KGT GL+F KS S + AFSDADWAGC+D+RRSTGG +F Sbjct: 748 TTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGP 807 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NL+ W+++K VSRSS E+EY++LAN T ++ W+ + EL ++ + LWCDN Sbjct: 808 NLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGAT 867 Query: 127 SLASNPVFHARTKHIEVD 74 L++NPVFHARTKHIE+D Sbjct: 868 YLSANPVFHARTKHIEID 885 Score = 28.1 bits (61), Expect(2) = 1e-57 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+VA K +D+ +++ +Q+ Sbjct: 887 HFVREQVAKKLLDIQFISTTDQL 909 >gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|108706314|gb|ABF94109.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1247 Score = 224 bits (572), Expect(2) = 1e-57 Identities = 111/206 (53%), Positives = 143/206 (69%), Gaps = 2/206 (0%) Frame = -3 Query: 661 QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488 +P + P++ + KLS G+ +D + YRS +GALQYLTLTRPDIAF VNK+ QFLHAP Sbjct: 1001 KPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAP 1060 Query: 487 SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308 + HW A KR+LRYLK +GLK SKS S + A+SDADWAG D+RRSTGG +F Sbjct: 1061 TTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGD 1120 Query: 307 NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128 NLV W+++K VSRSS ESEY++LAN T +++W+ +L EL V + LWCDN Sbjct: 1121 NLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAK 1180 Query: 127 SLASNPVFHARTKHIEVDVTLFGKRL 50 L++NPVFHARTKHIEVD +R+ Sbjct: 1181 YLSANPVFHARTKHIEVDYHFVRERV 1206 Score = 25.4 bits (54), Expect(2) = 1e-57 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = -2 Query: 71 HFVREKVASKFVDVGHVTSIEQV 3 HFVRE+V+ K +++ V + +QV Sbjct: 1200 HFVRERVSRKLLEIDFVPTGDQV 1222