BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00034435
         (663 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   229   3e-60
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   235   6e-60
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   232   8e-60
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   229   1e-59
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   228   2e-59
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   226   7e-59
gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subc...   226   7e-59
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   232   9e-59
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   232   9e-59
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  226   1e-58
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                227   1e-58
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   228   2e-58
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   224   7e-58
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   229   8e-58
gb|AAB82754.1| retrofit [Oryza longistaminata]                        223   1e-57
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   225   1e-57
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   225   1e-57
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz...   225   1e-57
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   222   1e-57
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   224   1e-57

>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  229 bits (583), Expect(2) = 3e-60
 Identities = 107/201 (53%), Positives = 143/201 (71%), Gaps = 2/201 (0%)
 Frame = -3

Query: 646  PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
            P++++ KLS + G  F   D + YRS +GALQYLTLTRPD++F+VNK+ Q+LHAP+  HW
Sbjct: 1189 PLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHW 1248

Query: 472  VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
             A KR+LRYLK T  +GLK SKS+S  + AFSDADWAGC D+R STGG  +F   NLV W
Sbjct: 1249 AAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSW 1308

Query: 292  NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
            +++K   VSRSS E+EY++LAN T +++W+ +L  ELG+       +WCDN     + +N
Sbjct: 1309 SARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTAN 1368

Query: 112  PVFHARTKHIEVDVTLFGKRL 50
            PVFHARTKHIEVD     +R+
Sbjct: 1369 PVFHARTKHIEVDYHFVRERV 1389



 Score = 30.0 bits (66), Expect(2) = 3e-60
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+VA KF+ V ++++ +QV
Sbjct: 1383 HFVRERVARKFLQVEYISTKDQV 1405


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  235 bits (599), Expect(2) = 6e-60
 Identities = 113/205 (55%), Positives = 149/205 (72%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482
            +P   PM+   KL   SG +FSDP+LYRSTIGALQYLT TRPDIAF VNKLSQ+L  P+ 
Sbjct: 754  KPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTE 813

Query: 481  DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302
             HW ACKR+LRYLKG    GL F+ +SS  L+ ++DADWA   D+RRST G+C+F  +NL
Sbjct: 814  LHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNL 873

Query: 301  VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122
              W+S+K  +V+RSS ++EYR+LA+ + ++ WL SL  ELG+S+     +WCDN    +L
Sbjct: 874  FTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGAL 933

Query: 121  ASNPVFHARTKHIEVDVTLFGKRLL 47
            A+NPVFH+RTKHIEVDV    +++L
Sbjct: 934  AANPVFHSRTKHIEVDVXYVREQVL 958



 Score = 22.7 bits (47), Expect(2) = 6e-60
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 68   FVREKVASKFVDVGHVTSIEQ 6
            +VRE+V  K + V +V S+EQ
Sbjct: 952  YVREQVLDKKLVVSYVPSVEQ 972


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  232 bits (592), Expect(2) = 8e-60
 Identities = 114/207 (55%), Positives = 144/207 (69%), Gaps = 2/207 (0%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++V+ KLS + G      D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP
Sbjct: 929  KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 988

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW+A KR+LRYLK    +GL+  KS S  +  FSDADWAGC D+RRSTGG  IF  S
Sbjct: 989  TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1048

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV WN++K   VSRSS ESEY+++AN T +++W+ +L  EL +       +WCDN    
Sbjct: 1049 NLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1108

Query: 127  SLASNPVFHARTKHIEVDVTLFGKRLL 47
             L++NPVFHARTKHIEVD     +RLL
Sbjct: 1109 YLSANPVFHARTKHIEVDYHFVRERLL 1135



 Score = 25.0 bits (53), Expect(2) = 8e-60
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -2

Query: 71   HFVREKVASKFVDVG 27
            HFVRE++ S+F+++G
Sbjct: 1128 HFVRERLLSRFINLG 1142


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  229 bits (585), Expect(2) = 1e-59
 Identities = 112/206 (54%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++V+ KLS + G      D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP
Sbjct: 1207 KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 1266

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW+A KR+LRYLK    +GL+  KS S  +  FSDADWAGC D+RRSTGG  IF  S
Sbjct: 1267 TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1326

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV WN++K   VSRSS ESEY+++AN T +++W+ +L  EL +       +WCDN    
Sbjct: 1327 NLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1386

Query: 127  SLASNPVFHARTKHIEVDVTLFGKRL 50
             L++NPVFHARTKHIEVD     +R+
Sbjct: 1387 YLSANPVFHARTKHIEVDYHFVRERV 1412



 Score = 26.9 bits (58), Expect(2) = 1e-59
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+V+ K +++  V++ +QV
Sbjct: 1406 HFVRERVSQKLLEIDFVSTNDQV 1428


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  228 bits (582), Expect(2) = 2e-59
 Identities = 108/201 (53%), Positives = 144/201 (71%), Gaps = 2/201 (0%)
 Frame = -3

Query: 646  PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
            P++++ KLS + G      D + YRS +GALQYLTLTRPD++F+VNK+ Q+LHA +  HW
Sbjct: 789  PLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHW 848

Query: 472  VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
            VA KR+LRYLK T  +GLK SKS+S  + AFSDADWAGC D+RRSTGG  +F   NLV W
Sbjct: 849  VAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 908

Query: 292  NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
            +++K   VSRSS E+EY++LAN T +++W+ +L  ELG+ V     +WCDN     + +N
Sbjct: 909  SARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTAN 968

Query: 112  PVFHARTKHIEVDVTLFGKRL 50
            PVFHARTKHIEVD     +R+
Sbjct: 969  PVFHARTKHIEVDYHFVRERV 989



 Score = 27.7 bits (60), Expect(2) = 2e-59
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+VA K + V ++++ +QV
Sbjct: 983  HFVRERVARKLLQVEYISTKDQV 1005


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  226 bits (576), Expect(2) = 7e-59
 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 2/201 (0%)
 Frame = -3

Query: 646  PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
            P++++ KLS Y G      D + YRS +GAL YLTLTRPD++F+VNK+ Q+LHAP+ +HW
Sbjct: 856  PLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTTEHW 915

Query: 472  VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
             A KR+LRYLK T  +GLK  KS+S  + AFSDADWAGC D+RRSTGG  +F   NLV W
Sbjct: 916  AAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 975

Query: 292  NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
            +++K   VSRSS E+EY++L N T +++W+ +L  ELG+ V     +WCDN     + +N
Sbjct: 976  SARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIAN 1035

Query: 112  PVFHARTKHIEVDVTLFGKRL 50
            PVF+ARTKHIEVD     +R+
Sbjct: 1036 PVFYARTKHIEVDYHFVRERV 1056



 Score = 28.1 bits (61), Expect(2) = 7e-59
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+VA K + V ++++ +QV
Sbjct: 1050 HFVRERVAQKLLQVEYISTNDQV 1072


>gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 658

 Score =  226 bits (576), Expect(2) = 7e-59
 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 2/201 (0%)
 Frame = -3

Query: 646 PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
           P++++ KLS Y G      D + YRS +GAL YLTLTRPD++F+VNK+ Q+LHAP+ +HW
Sbjct: 77  PLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTTEHW 136

Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
            A KR+LRYLK T  +GLK  KS+S  + AFSDADWAGC D+RRSTGG  +F   NLV W
Sbjct: 137 AAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSW 196

Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
           +++K   VSRSS E+EY++L N T +++W+ +L  ELG+ V     +WCDN     + +N
Sbjct: 197 SARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIAN 256

Query: 112 PVFHARTKHIEVDVTLFGKRL 50
           PVF+ARTKHIEVD     +R+
Sbjct: 257 PVFYARTKHIEVDYHFVRERV 277



 Score = 28.1 bits (61), Expect(2) = 7e-59
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 71  HFVREKVASKFVDVGHVTSIEQV 3
           HFVRE+VA K + V ++++ +QV
Sbjct: 271 HFVRERVAQKLLQVEYISTNDQV 293


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  232 bits (591), Expect(2) = 9e-59
 Identities = 110/197 (55%), Positives = 143/197 (72%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482
            +P   P  +   LS   GE FSD +LYRST+GALQYLTLTRPDI+F VNK  QF+  P+ 
Sbjct: 974  KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTT 1033

Query: 481  DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302
             HW+A KR+LRYLKGT + G++  +S+S  +  ++DADWA C D+RRSTGG+ IF   NL
Sbjct: 1034 THWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNL 1093

Query: 301  VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122
            V W+S K  +VSRSSAESEYR+LA+ T +++W+  +  EL +S  +P  LWCDN S   L
Sbjct: 1094 VSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHL 1153

Query: 121  ASNPVFHARTKHIEVDV 71
            A+NPVFHARTKHIE+D+
Sbjct: 1154 AANPVFHARTKHIEMDL 1170



 Score = 21.9 bits (45), Expect(2) = 9e-59
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HF+R+ V  K + + ++ S EQV
Sbjct: 1171 HFIRDHVLRKQLVIQYLPSAEQV 1193


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  232 bits (591), Expect = 9e-59
 Identities = 110/197 (55%), Positives = 143/197 (72%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSA 482
            +P   P  +   LS   GE FSD +LYRST+GALQYLTLTRPDI+F VNK  QF+  P+ 
Sbjct: 1116 KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTT 1175

Query: 481  DHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNL 302
             HW+A KR+LRYLKGT + G++  +S+S  +  ++DADWA C D+RRSTGG+ IF   NL
Sbjct: 1176 THWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNL 1235

Query: 301  VIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSL 122
            V W+S K  +VSRSSAESEYR+LA+ T +++W+  +  EL +S  +P  LWCDN S   L
Sbjct: 1236 VSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHL 1295

Query: 121  ASNPVFHARTKHIEVDV 71
            A+NPVFHARTKHIE+D+
Sbjct: 1296 AANPVFHARTKHIEMDL 1312


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  226 bits (577), Expect(2) = 1e-58
 Identities = 107/206 (51%), Positives = 146/206 (70%), Gaps = 2/206 (0%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P + P++V+ KL+ Y G     +D + YRS +GALQYLTLTRPDIA++VNK+ QFLHAP
Sbjct: 1190 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1249

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            + DHW A KR+LRYL    ++GL   KS+S  +  +SDADWAG  D+R+STGG  +F  S
Sbjct: 1250 TTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGS 1309

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV W+++K   VSRSS E+EY+++ANTT +L+W+ +L  ELG+       +WCDN    
Sbjct: 1310 NLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAK 1369

Query: 127  SLASNPVFHARTKHIEVDVTLFGKRL 50
             L++NPVFHARTKHIEVD     +R+
Sbjct: 1370 YLSANPVFHARTKHIEVDYHFVRERV 1395



 Score = 26.9 bits (58), Expect(2) = 1e-58
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+V+ K +++  V S +QV
Sbjct: 1389 HFVRERVSQKLLEIDFVPSGDQV 1411


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score =  227 bits (579), Expect(2) = 1e-58
 Identities = 108/205 (52%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
 Frame = -3

Query: 658  PCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPS 485
            P   P+  + KLS   G      D + Y S +GALQYLTLTRPDI+F VNK+ QFLH+P+
Sbjct: 767  PVDTPLCSSEKLSIEDGNKLGSEDATKYCSVVGALQYLTLTRPDISFAVNKVCQFLHSPT 826

Query: 484  ADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSN 305
              HW A KR+LRY+KGT  +G+KFSKS S  + AF+DADWAGC D+RRSTGG  +F  +N
Sbjct: 827  TIHWSAVKRILRYIKGTTKLGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLGNN 886

Query: 304  LVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVS 125
            L+ W +KK   VSRSS E+EY++LAN T +++W+  L  ELGV       LWCDN     
Sbjct: 887  LISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNLGATY 946

Query: 124  LASNPVFHARTKHIEVDVTLFGKRL 50
            L++NP+FHARTKHIE+D     +R+
Sbjct: 947  LSANPIFHARTKHIEIDFHFVRERV 971



 Score = 26.2 bits (56), Expect(2) = 1e-58
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+VA K ++V  +++ +Q+
Sbjct: 965  HFVRERVAQKLLEVRFISTGDQL 987


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  228 bits (582), Expect(2) = 2e-58
 Identities = 108/193 (55%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
 Frame = -3

Query: 646  PMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
            P++   KLS Y GE     D + YRS +GALQYLTLTRPDI+F+VNK+ QFL  P+  HW
Sbjct: 810  PLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISFSVNKVCQFLQNPTTVHW 869

Query: 472  VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
               KR+LRY+KGT  +GLK  KSSS  + A+SDADWA C D++RSTGG  +F  SNL+ W
Sbjct: 870  ATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNLISW 929

Query: 292  NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
            N++K   VSRSS E+EY++LAN T +++W+  L  ELG+S   P  LWCDN     L+ N
Sbjct: 930  NARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYLSVN 989

Query: 112  PVFHARTKHIEVD 74
            PVFHARTKHIE+D
Sbjct: 990  PVFHARTKHIEID 1002



 Score = 24.3 bits (51), Expect(2) = 2e-58
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+VA K + +  V S +QV
Sbjct: 1004 HFVREQVAQKQLALQFVPSQDQV 1026


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  224 bits (572), Expect(2) = 7e-58
 Identities = 110/202 (54%), Positives = 138/202 (68%)
 Frame = -3

Query: 652 AMPMAVNTKLSKYSGESFSDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAPSADHW 473
           A PMA    LS   G    DP+LYRS +GALQY T+TRPDIA+TVNKL QF+HAP++ H 
Sbjct: 79  ASPMAAGPVLSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTSTHL 138

Query: 472 VACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWSNLVIW 293
              KR+LRYLKG+   GL F  SSS  L A++DADWA C D+RRST G+CIFF  NLV W
Sbjct: 139 QVVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVSW 198

Query: 292 NSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVVSLASN 113
           ++ K  +VSRSS ESEYR LAN   +L W+ SL  EL + +  P  L+CDN S   LA+N
Sbjct: 199 SASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAAN 258

Query: 112 PVFHARTKHIEVDVTLFGKRLL 47
           P+ H+R KH+E+D     +R+L
Sbjct: 259 PILHSRAKHVEIDYHFVRERVL 280



 Score = 26.2 bits (56), Expect(2) = 7e-58
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 71  HFVREKVASKFVDVGHVTSIEQV 3
           HFVRE+V  K +DV  + S +QV
Sbjct: 273 HFVRERVLQKTLDVRFLPSEDQV 295


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  229 bits (583), Expect = 8e-58
 Identities = 111/198 (56%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++V+ KLS + G      D S YRS +GALQYLTLTRPDIAF+VNK+ QFLHAP
Sbjct: 1200 KPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAP 1259

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW+A KR+LRYLK    +GL+  KS S  +  FSDADWAGC D+RRSTGG  IF  S
Sbjct: 1260 TTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGS 1319

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV WN++K   VSRSS ESEY+++AN T +++W+ +L  EL +       +WCDN    
Sbjct: 1320 NLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAK 1379

Query: 127  SLASNPVFHARTKHIEVD 74
             L++NPVFHARTKHIEVD
Sbjct: 1380 YLSANPVFHARTKHIEVD 1397


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  223 bits (569), Expect(2) = 1e-57
 Identities = 106/206 (51%), Positives = 145/206 (70%), Gaps = 2/206 (0%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P + P++V+ KL+ Y G     +D   YRS +GALQYLTLTRPDIA++VNK+ QFLHAP
Sbjct: 1199 KPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1258

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW+A KR+LRYL    ++GL   KS+S  +  +SDADWAG  D+R+STGG  +F  S
Sbjct: 1259 TTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGS 1318

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV W+++K   VSRSS E+EY+++ANTT +L+W+ +L  ELG+       +WCDN    
Sbjct: 1319 NLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAK 1378

Query: 127  SLASNPVFHARTKHIEVDVTLFGKRL 50
             L++NPVFHARTKHIEVD     +R+
Sbjct: 1379 YLSANPVFHARTKHIEVDYHFVRERV 1404



 Score = 26.9 bits (58), Expect(2) = 1e-57
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+V+ K +++  V S +QV
Sbjct: 1398 HFVRERVSQKLLEIDFVPSGDQV 1420


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  225 bits (573), Expect(2) = 1e-57
 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++ + KLS   G      D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P
Sbjct: 818  KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 877

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW A KR++RYL+GT  +GLK  KS S  + AFSDADWAGC D+RRST G  +F  S
Sbjct: 878  TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 937

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NL+ W+ +K   VSRSS E+EY++LAN T +++W+ +L  ELG+   +   LWCDN    
Sbjct: 938  NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 997

Query: 127  SLASNPVFHARTKHIEV 77
             L++NP+FHARTKHIEV
Sbjct: 998  YLSANPIFHARTKHIEV 1014



 Score = 25.4 bits (54), Expect(2) = 1e-57
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQ 6
            HFVRE+VA K +++   +++++
Sbjct: 1017 HFVRERVAQKLLEIEGASAVDE 1038


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  225 bits (573), Expect(2) = 1e-57
 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++ + KLS   G      D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P
Sbjct: 780  KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 839

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW A KR++RYL+GT  +GLK  KS S  + AFSDADWAGC D+RRST G  +F  S
Sbjct: 840  TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 899

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NL+ W+ +K   VSRSS E+EY++LAN T +++W+ +L  ELG+   +   LWCDN    
Sbjct: 900  NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 959

Query: 127  SLASNPVFHARTKHIEV 77
             L++NP+FHARTKHIEV
Sbjct: 960  YLSANPIFHARTKHIEV 976



 Score = 25.4 bits (54), Expect(2) = 1e-57
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQ 6
            HFVRE+VA K +++   +++++
Sbjct: 979  HFVRERVAQKLLEIEGASAVDE 1000


>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1139

 Score =  225 bits (573), Expect(2) = 1e-57
 Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESFS--DPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P   P++ + KLS   G      D + YRS +GALQYLTLTRPDIAF++NK+ QFLH+P
Sbjct: 786  KPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSP 845

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW A KR++RYL+GT  +GLK  KS S  + AFSDADWAGC D+RRST G  +F  S
Sbjct: 846  TLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGS 905

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NL+ W+ +K   VSRSS E+EY++LAN T +++W+ +L  ELG+   +   LWCDN    
Sbjct: 906  NLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKELGIQCPSMARLWCDNLGAT 965

Query: 127  SLASNPVFHARTKHIEV 77
             L++NP+FHARTKHIEV
Sbjct: 966  YLSANPIFHARTKHIEV 982



 Score = 25.4 bits (54), Expect(2) = 1e-57
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQ 6
            HFVRE+VA K +++   +++++
Sbjct: 985  HFVRERVAQKLLEIEGASAVDE 1006


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  222 bits (566), Expect(2) = 1e-57
 Identities = 104/198 (52%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P + P++   KLS   G+    +D S YRS +GALQYLTLTR D++F VNK+ QFLH+P
Sbjct: 688  KPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSP 747

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW A KR+LRY+KGT   GL+F KS S  + AFSDADWAGC+D+RRSTGG  +F   
Sbjct: 748  TTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGP 807

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NL+ W+++K   VSRSS E+EY++LAN T ++ W+  +  EL ++  +   LWCDN    
Sbjct: 808  NLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGAT 867

Query: 127  SLASNPVFHARTKHIEVD 74
             L++NPVFHARTKHIE+D
Sbjct: 868  YLSANPVFHARTKHIEID 885



 Score = 28.1 bits (61), Expect(2) = 1e-57
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 71  HFVREKVASKFVDVGHVTSIEQV 3
           HFVRE+VA K +D+  +++ +Q+
Sbjct: 887 HFVREQVAKKLLDIQFISTTDQL 909


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  224 bits (572), Expect(2) = 1e-57
 Identities = 111/206 (53%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
 Frame = -3

Query: 661  QPCAMPMAVNTKLSKYSGESF--SDPSLYRSTIGALQYLTLTRPDIAFTVNKLSQFLHAP 488
            +P + P++ + KLS   G+    +D + YRS +GALQYLTLTRPDIAF VNK+ QFLHAP
Sbjct: 1001 KPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAP 1060

Query: 487  SADHWVACKRLLRYLKGTATVGLKFSKSSSYCLEAFSDADWAGCTDNRRSTGGHCIFFWS 308
            +  HW A KR+LRYLK    +GLK SKS S  + A+SDADWAG  D+RRSTGG  +F   
Sbjct: 1061 TTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGD 1120

Query: 307  NLVIWNSKK*DIVSRSSAESEYRSLANTTVDLLWLHSLCGELGVSVQAPHHLWCDNTSVV 128
            NLV W+++K   VSRSS ESEY++LAN T +++W+ +L  EL V   +   LWCDN    
Sbjct: 1121 NLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAK 1180

Query: 127  SLASNPVFHARTKHIEVDVTLFGKRL 50
             L++NPVFHARTKHIEVD     +R+
Sbjct: 1181 YLSANPVFHARTKHIEVDYHFVRERV 1206



 Score = 25.4 bits (54), Expect(2) = 1e-57
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 71   HFVREKVASKFVDVGHVTSIEQV 3
            HFVRE+V+ K +++  V + +QV
Sbjct: 1200 HFVRERVSRKLLEIDFVPTGDQV 1222