BLASTX nr result
ID: Mentha27_contig00033095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00033095
(1105 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V sub... 175 3e-41
ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II su... 169 2e-39
ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7,... 166 2e-38
ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain,... 162 2e-37
ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Popu... 158 3e-36
ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prun... 157 6e-36
emb|CBI26363.3| unnamed protein product [Vitis vinifera] 147 8e-33
gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus not... 144 5e-32
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su... 144 5e-32
ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II su... 140 7e-31
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep... 139 2e-30
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su... 136 2e-29
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su... 135 2e-29
ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, part... 132 3e-28
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai... 132 3e-28
ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Caps... 132 3e-28
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su... 130 8e-28
ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prun... 130 1e-27
ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutr... 130 1e-27
ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V sub... 129 2e-27
>ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 186
Score = 175 bits (443), Expect = 3e-41
Identities = 92/176 (52%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Frame = -2
Query: 1002 VVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 826
VV+ + + K+ E+ S VI R QL+ ++A E GY L VTK+ S+G G SS++I
Sbjct: 11 VVVPMEDIKKSGELPGSIVIRRLFSQLTFLRATEDCGYFLKVTKVKSVGSGKLLDSSKYI 70
Query: 825 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 646
+FPV F RTF P GEVL GIV +V HGVFLK GPMN +YLS +KMPNY YV GENP
Sbjct: 71 MFPVTFHSRTFLPKTGEVLVGIVIEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVSGENPF 130
Query: 645 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGLDGVDL 478
F+ +D S+IE V V ++V A+RW + ++F VLA+ID D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIDGDSLGPVSLNGFDGLEL 186
>ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Solanum
lycopersicum]
Length = 186
Score = 169 bits (427), Expect = 2e-39
Identities = 88/176 (50%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Frame = -2
Query: 1002 VVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSSSEHI 826
VV+ + + K+ E+ + +I R QL+ ++A E GY L VTK+ S+G+G SS++I
Sbjct: 11 VVVPMEDIKKSGELPGNIIIRRLFSQLTFLRATEDCGYFLKVTKVKSVGNGKLLDSSKYI 70
Query: 825 LFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGENPI 646
+FPV F TF P GEVL GIV +V HGVFLK GPMN +YLS +KMPNY YV GENP
Sbjct: 71 MFPVTFHSLTFLPKIGEVLVGIVVEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVPGENPF 130
Query: 645 FVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGLDGVDL 478
F+ +D S+IE V V ++V A+RW + ++F VLA+I+ D LGPV+LNG DG++L
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIEGDCLGPVSLNGFDGLEL 186
>ref|XP_007034969.1| DNA-directed RNA polymerase II subunit RPB7, putative isoform 1
[Theobroma cacao] gi|590658861|ref|XP_007034970.1|
DNA-directed RNA polymerase II subunit RPB7, putative
isoform 1 [Theobroma cacao]
gi|590658864|ref|XP_007034971.1| DNA-directed RNA
polymerase II subunit RPB7, putative isoform 1 [Theobroma
cacao] gi|508713998|gb|EOY05895.1| DNA-directed RNA
polymerase II subunit RPB7, putative isoform 1 [Theobroma
cacao] gi|508713999|gb|EOY05896.1| DNA-directed RNA
polymerase II subunit RPB7, putative isoform 1 [Theobroma
cacao] gi|508714000|gb|EOY05897.1| DNA-directed RNA
polymerase II subunit RPB7, putative isoform 1 [Theobroma
cacao]
Length = 190
Score = 166 bits (419), Expect = 2e-38
Identities = 91/189 (48%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Frame = -2
Query: 1041 ITDMLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLIS 865
I DM EV L V + +DK V ++ L+ L +A E +GY LSVT L S
Sbjct: 3 IQDMFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKS 62
Query: 864 IGHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQK 685
IG GD S +++F V F CRTF P GEVL G+VH + H GVFL+ GP+ + YLSA K
Sbjct: 63 IGKGDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWK 122
Query: 684 MPNYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
MPNY YV G P+F+ DDLSKIE VVV ++VLAVRW ++F +LA++++D LGP++
Sbjct: 123 MPNYHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPIS 181
Query: 504 LNGLDGVDL 478
L D VDL
Sbjct: 182 LPWSDEVDL 190
>ref|XP_007034972.1| RNA polymerase Rpb7-like, N-terminal domain, putative isoform 4
[Theobroma cacao] gi|590658871|ref|XP_007034973.1| RNA
polymerase Rpb7-like, N-terminal domain, putative isoform
4 [Theobroma cacao] gi|508714001|gb|EOY05898.1| RNA
polymerase Rpb7-like, N-terminal domain, putative isoform
4 [Theobroma cacao] gi|508714002|gb|EOY05899.1| RNA
polymerase Rpb7-like, N-terminal domain, putative isoform
4 [Theobroma cacao]
Length = 185
Score = 162 bits (410), Expect = 2e-37
Identities = 89/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGH 856
M EV L V + +DK V ++ L+ L +A E +GY LSVT L SIG
Sbjct: 1 MFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKSIGK 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
GD S +++F V F CRTF P GEVL G+VH + H GVFL+ GP+ + YLSA KMPN
Sbjct: 61 GDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWKMPN 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNG 496
Y YV G P+F+ DDLSKIE VVV ++VLAVRW ++F +LA++++D LGP++L
Sbjct: 121 YHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPISLPW 179
Query: 495 LDGVDL 478
D VDL
Sbjct: 180 SDEVDL 185
>ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Populus trichocarpa]
gi|222863693|gb|EEF00824.1| hypothetical protein
POPTR_0010s08780g [Populus trichocarpa]
Length = 189
Score = 158 bits (400), Expect = 3e-36
Identities = 82/189 (43%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M EV + V I +D+N V ++ LK L ++KA ++GY L+VT L SIG
Sbjct: 1 MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G+ + S +LF V+F CRTF P+ GE+L G+VH+ HGV L+ GP+ ++LSA+KMPN
Sbjct: 61 GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---KEFRVLATIDSDGLGPVA 505
Y Y ENP+F+ D+L++IE V+V + VL VRW + W ++F +LA++ D LGP++
Sbjct: 121 YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180
Query: 504 LNGLDGVDL 478
L G D +DL
Sbjct: 181 LCGSDELDL 189
>ref|XP_007223531.1| hypothetical protein PRUPE_ppa012042mg [Prunus persica]
gi|462420467|gb|EMJ24730.1| hypothetical protein
PRUPE_ppa012042mg [Prunus persica]
Length = 186
Score = 157 bits (398), Expect = 6e-36
Identities = 89/188 (47%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGH 856
M EV L +V + +D++K V + F++ R L+ L + KA E GY L+VT + IG
Sbjct: 1 MFYEVELLREVAVLAENLDRDKLVSSRFIVTRLLEGLLSEKADEDLGYFLAVTGIKRIGK 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G+ +S + FPV F CR F P GE+L G+V V GVFL+ GP+ V+LSA+KMPN
Sbjct: 61 GEVVHNSGDVFFPVVFNCRMFLPRKGEILEGVVDHVHRLGVFLRCGPVKYVFLSARKMPN 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW--RQDKWKEFRVLATIDSDGLGPVAL 502
Y YV+GE P+F+ DDL++IE VVV + V VRW R+D KEF +LAT+ D LGPV
Sbjct: 121 YRYVVGEKPVFLHDDLARIEKDVVVRFEVFGVRWMRREDITKEFMMLATLQGDLLGPV-- 178
Query: 501 NGLDGVDL 478
G DG+DL
Sbjct: 179 TGPDGLDL 186
>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 147 bits (371), Expect = 8e-33
Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Frame = -2
Query: 1038 TDMLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISI 862
T+M +V L V+I +D +L +I R L SN KA E GY L+VT L +I
Sbjct: 64 TEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENI 123
Query: 861 GHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKM 682
G G + S +LFPV F C TF GE+L G+VHKV HGV L+ GP+ +YLS QKM
Sbjct: 124 GEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKM 183
Query: 681 PNYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
P+Y YV GENP+F+ + LSKIE VVV ++V+ +W + + +EF+ L +++ D LGP++
Sbjct: 184 PDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 241
>gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 202
Score = 144 bits (364), Expect = 5e-32
Identities = 87/203 (42%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLA--SFVIERFLKQLSNIKAC-EYGYLLSVTKLISI 862
M EV L V + + + V SF++ R L+ L KA ++GY L+VT L I
Sbjct: 1 MFSEVELIRDVTVDAENIKSDGLVSRPQSFIMTRLLEDLVREKASKDHGYFLAVTSLKKI 60
Query: 861 GHGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKM 682
G S + FPV F CRTF P GE+L GIVH + HGVFL+ GP+ YLSA+KM
Sbjct: 61 GKMKAVEESGDVFFPVVFNCRTFLPYEGEILQGIVHCIYRHGVFLRCGPIKYAYLSARKM 120
Query: 681 PNYFYVLGE-----------NPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW----KEFR 547
P Y YV G+ P+FV ++ +KIE GVVV +MVL VRW ++ W EF
Sbjct: 121 PGYQYVYGQKMACQKCGHDRKPLFVSNEFAKIENGVVVCFMVLGVRWFEN-WGNVKNEFG 179
Query: 546 VLATIDSDGLGPVALNGLDGVDL 478
VLAT++ D LGP++L+G +DL
Sbjct: 180 VLATLEGDSLGPISLSGSGELDL 202
>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147822056|emb|CAN61549.1| hypothetical
protein VITISV_043525 [Vitis vinifera]
Length = 177
Score = 144 bits (364), Expect = 5e-32
Identities = 79/177 (44%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+I +D +L +I R L SN KA E GY L+VT L +IG
Sbjct: 1 MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + S +LFPV F C TF GE+L G+VHKV HGV L+ GP+ +YLS QKMP+
Sbjct: 61 GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y YV GENP+F+ + LSKIE VVV ++V+ +W + + +EF+ L +++ D LGP++
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 176
>ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb7-like [Fragaria
vesca subsp. vesca]
Length = 188
Score = 140 bits (354), Expect = 7e-31
Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 5/180 (2%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIE-RFLKQLSNIKAC-EYGYLLSVTKLISIG 859
M EV L VV+ ++DK+ + VI + LK L KA ++GY L VT L +G
Sbjct: 1 MYSEVELVRGVVVLAEKLDKDSPFSSKSVITTQLLKDLLKEKASKDHGYFLKVTALKKVG 60
Query: 858 HGDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMP 679
G S +LF V F CRTF P+ GE+L G+V+KV + GVF++ GP+N YLSA+KMP
Sbjct: 61 TGQILDHSRKMLFHVAFSCRTFIPLQGEILEGVVYKVHNLGVFIRCGPLNYAYLSARKMP 120
Query: 678 NYFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRW---RQDKWKEFRVLATIDSDGLGPV 508
NY YV G P F++ DL+KIE VVV + VL RW ++ EF VL ++ D LGPV
Sbjct: 121 NYHYVAGTKPFFLKGDLAKIEKKVVVRFRVLHARWTAKSREIRNEFVVLGSMVGDSLGPV 180
>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223538083|gb|EEF39694.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 139 bits (351), Expect = 2e-30
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+IS +D +L +I R L+ ++ KA + GY L+VT L SIG
Sbjct: 1 MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + +LFPV F TF GE+L G+VHKV HGVF++ GP+ +YLS KMP+
Sbjct: 61 GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y YV GENP+F+ D SKIE VVV ++V+ +W + + +EF+ L +++ D LGPV+
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176
>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus] gi|449432630|ref|XP_004134102.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus] gi|449504102|ref|XP_004162253.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus] gi|449504105|ref|XP_004162254.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus]
Length = 190
Score = 136 bits (342), Expect = 2e-29
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 5/190 (2%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M EV L V I+V + ++ ++I L+ L KA ++GY LSVT L SIG
Sbjct: 1 MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G K+ S+ + FP+ F CRTF P GE+L G+V + G+ LK GP+ V+LSA+KMP
Sbjct: 61 GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKW---KEFRVLATID-SDGLGPV 508
Y YV GENP+F + + I VVV + VL VRW + + KEF +LA+++ ++ LGP+
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
Query: 507 ALNGLDGVDL 478
+L+ D DL
Sbjct: 181 SLSDSDEFDL 190
>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus] gi|449522228|ref|XP_004168129.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
sativus]
Length = 175
Score = 135 bits (341), Expect = 2e-29
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+I +D +L +I R L + + KA + GY L+VT L +IG
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + + +LFPV F TF GE+L G+VHKV HGVFL+ GP+ +YLS KMP+
Sbjct: 61 GKVRQTGD-VLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y YV GENP+F+ D LSKIE VVV ++V+ +W + + +EF+ L +++ D LGPV+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 175
>ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, partial [Capsella rubella]
gi|482551416|gb|EOA15609.1| hypothetical protein
CARUB_v10005692mg, partial [Capsella rubella]
Length = 221
Score = 132 bits (332), Expect = 3e-28
Identities = 74/172 (43%), Positives = 107/172 (62%), Gaps = 19/172 (11%)
Frame = -2
Query: 948 VIERFLKQLSNIKAC-EYGYLLSVTKLISIGHGDNK-----------SSSEHILFPVDFC 805
++ R L+ L++ KAC ++G+ L +T + SIG NK ++ + FPV F
Sbjct: 46 ILTRLLQVLTHEKACRKHGFYLGITSVKSIGKNKNKIININNNNEDNHQAQILTFPVSFT 105
Query: 804 CRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLGEN----PIFVR 637
CRTF P G+VL G+V V +GVF+ SGP+ YLS KMP+Y YV E+ P F +
Sbjct: 106 CRTFLPARGDVLQGVVKMVLSNGVFISSGPLRYAYLSPLKMPDYHYVQSESDDEKPYFQK 165
Query: 636 DDLSKIEIGVVVSYMVLAVRWRQDKWK---EFRVLATIDSDGLGPVALNGLD 490
DDLSKI +GVVV ++VLAVR+++ K ++ VLAT++ D LGP++L G D
Sbjct: 166 DDLSKIAVGVVVQFVVLAVRFKERPHKIRNDYYVLATLEGDTLGPISLAGSD 217
>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
[Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
polymerase Rpb7 N-terminal domain-containing family
protein [Populus trichocarpa]
Length = 176
Score = 132 bits (332), Expect = 3e-28
Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+I +D +L ++ R L + A + GY L+V+ L SIG
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + +LFPV F TF GE+L GIVHKV HGV L+ GP+ +YLS KMP+
Sbjct: 61 GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y YV GENP+F+ D SKIE VVV ++VL +W + + +EF+ L +++ D LGPV+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAE-REFQALVSLEGDYLGPVS 176
>ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Capsella rubella]
gi|482553333|gb|EOA17526.1| hypothetical protein
CARUB_v10005859mg [Capsella rubella]
Length = 178
Score = 132 bits (331), Expect = 3e-28
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+I MD +L ++ L ++ KA E GY ++VT L IG
Sbjct: 1 MFLKVKLPWNVMIPAENMDAKGLMLKRAILVELLNAFASKKATKELGYYVAVTTLDKIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + +LFPV F TF GE++ G+VHKV HGVF++ GP+ VYLS KMP+
Sbjct: 61 GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYMKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y Y+ GENPIF+ D +S+I++ V +VL +W + + +EF+ LA+++ D LGP++
Sbjct: 121 YKYIPGENPIFMNDKMSRIQVEATVRVVVLGTKWMEAE-REFQALASLEGDYLGPIS 176
>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Solanum
lycopersicum]
Length = 180
Score = 130 bits (328), Expect = 8e-28
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Frame = -2
Query: 1014 LTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKACE-YGYLLSVTKLISIGHGDNKSS 838
L+ V+I +D +L ++ R L ++ KA + GY ++VT L IG G +
Sbjct: 7 LSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKSLGYFMAVTTLERIGEGKVREH 66
Query: 837 SEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPNYFYVLG 658
+ +LFPV+F C TF GE+L G+V K+ HGVFL+ GP + VYLS QKM +Y YV G
Sbjct: 67 TGDVLFPVEFSCITFKIFRGEILDGVVEKILKHGVFLRCGPTDKVYLSHQKMADYKYVPG 126
Query: 657 ENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVALNGL 493
ENPIF+ + +S+IE VV ++V+ R+ + + KEF+ + +++ D LGP++ N +
Sbjct: 127 ENPIFMNEKMSRIEKDTVVRFIVVGARYVEAE-KEFQAVVSLEGDYLGPISQNAV 180
>ref|XP_007225942.1| hypothetical protein PRUPE_ppa012282mg [Prunus persica]
gi|462422878|gb|EMJ27141.1| hypothetical protein
PRUPE_ppa012282mg [Prunus persica]
Length = 176
Score = 130 bits (327), Expect = 1e-27
Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L VVI +D +L ++ + L + ++ KA + GYLL++T L SIG
Sbjct: 1 MFLKVQLPWNVVIPAESLDIKGLMLQKSIVVQLLDEFASRKATKDLGYLLALTTLESIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + +LFPV F TF GE+ G+VHKV HGVFL GP+ +YLS KMP+
Sbjct: 61 GRVREHTGDVLFPVVFSGVTFKLFRGEIAEGVVHKVLKHGVFLSCGPVENIYLSKLKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y YV GENP+F+ +SKIE G V ++V+ +W + + +EF+ L + +D LGPV+
Sbjct: 121 YDYVPGENPVFMNSKMSKIEKGFTVRFIVIGTKWLESE-REFQALVGLHADYLGPVS 176
>ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutrema salsugineum]
gi|557115836|gb|ESQ56119.1| hypothetical protein
EUTSA_v10026369mg [Eutrema salsugineum]
Length = 178
Score = 130 bits (326), Expect = 1e-27
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L V+I MD +L ++ + L+ + KA E GY L+VT L IG
Sbjct: 1 MFLKVELPWNVMIPAENMDAKGLMLKRAILVQLLEAFALKKATVELGYYLTVTTLDKIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + + I+FPV F TF GE+L G+VHKV HGVFL+ GP+ VYLS+ KM +
Sbjct: 61 GKIREQTGEIMFPVVFSGVTFKIFKGEILQGVVHKVLKHGVFLRCGPVENVYLSSAKMLD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVA 505
Y +V GENPIF+ + +S+I++ V ++VLA +W + KEF+ LA++ D LGP++
Sbjct: 121 YKFVPGENPIFMNEKMSRIQVETTVRFVVLATKWMEVD-KEFQALASLQGDYLGPIS 176
>ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Citrus
sinensis]
Length = 182
Score = 129 bits (325), Expect = 2e-27
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Frame = -2
Query: 1032 MLREVVLTHKVVISVHRMDKNKEVLASFVIERFLKQLSNIKAC-EYGYLLSVTKLISIGH 856
M +V L VV+ +D +L ++ R L + KA + GY L+VT L +IG
Sbjct: 1 MFLKVKLPWNVVVPAENLDAKGPMLQRSIVVRLLDDFARRKATKDLGYFLAVTTLENIGE 60
Query: 855 GDNKSSSEHILFPVDFCCRTFTPVYGEVLTGIVHKVSHHGVFLKSGPMNMVYLSAQKMPN 676
G + ++ +LFPV F TF GEVL G VHKV HGVFLK GP+ +YL+ KMP+
Sbjct: 61 GRVRENTGEVLFPVVFSGITFKIFRGEVLDGTVHKVLKHGVFLKCGPVENIYLTCSKMPD 120
Query: 675 YFYVLGENPIFVRDDLSKIEIGVVVSYMVLAVRWRQDKWKEFRVLATIDSDGLGPVAL-N 499
Y YV ENP+F+ + KIE VVV +V+ +W + + +EF+ L +++ D LGPV+ N
Sbjct: 121 YRYVQAENPVFLSEKNPKIEKDVVVRVIVIGTKWLEAE-REFQALVSLEGDFLGPVSCEN 179
Query: 498 GLD 490
LD
Sbjct: 180 PLD 182