BLASTX nr result

ID: Mentha27_contig00031865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00031865
         (645 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCW03242.1| heavy metal ATPase [Nicotiana tabacum] gi|545190...    64   5e-08
emb|CCQ77797.1| heavy metal ATPase [Nicotiana tabacum] gi|545190...    61   3e-07
gb|AFD32367.1| HMA2 transporter [Sedum alfredii]                       61   3e-07
ref|XP_004242843.1| PREDICTED: cadmium/zinc-transporting ATPase ...    57   5e-06

>emb|CCW03242.1| heavy metal ATPase [Nicotiana tabacum] gi|545190801|emb|CCW03243.1|
            heavy metal ATPase, partial [Nicotiana tabacum]
          Length = 1444

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 51/179 (28%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
 Frame = +3

Query: 48   ESQNQHCH----VDSCGTKKCSSSKNEHHLPQKEEDSAEDHEHKHGCSTTGCENQETRPC 215
            + ++ H H     DSC T  C  S   H +        ++  H   C +T         C
Sbjct: 1270 DKEHNHSHPEKAYDSCATDDCCFSVQVHGIDDVSRSEIQETAH---CDSTKQSTVIPSSC 1326

Query: 216  QKSDKLCLESHCVNHXXXXXXXXE----ERYHCKGRRGHGVSSVSCEDSTECNAV----- 368
            +   K  + +HC +H        E     R  CK +  H V S   + + EC        
Sbjct: 1327 EHEPKDQV-NHCGSHSKSIPTDEELAKLVRRCCKYKPCHDVRSGCRKHAAECGPTVRSTI 1385

Query: 369  ------------CTGSK------KVH-RGCCDSFRRECCIRSGHFEANLRGGLSEIVID 488
                        C+G K      K H  GCCDSFR+ECC ++ H  A+  GGLSEIVI+
Sbjct: 1386 NILRDNHHHHLDCSGRKVCSLLEKRHIGGCCDSFRKECCAKNNHLGASFGGGLSEIVIE 1444


>emb|CCQ77797.1| heavy metal ATPase [Nicotiana tabacum] gi|545190783|emb|CCQ77798.1|
            heavy metal ATPase [Nicotiana tabacum]
          Length = 1403

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 51/179 (28%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
 Frame = +3

Query: 48   ESQNQHCH----VDSCGTKKCSSSKNEHHLPQKEEDSAEDHEHKHGCSTTGCENQETRPC 215
            + ++ H H     DSC T  C  S   H +    +   ++  H   C +T      +  C
Sbjct: 1229 DKEHDHSHPEKAYDSCATDDCCFSVQVHGIDDVSKSEIQETAH---CDSTKQSMVISSSC 1285

Query: 216  QKSDKLCLESHCVNHXXXXXXXXE----ERYHCKGRRGHGVSSVSCEDSTECNAV----- 368
            +   K  + +HC  H        E     R  CK +  H V S   + + EC        
Sbjct: 1286 KHEPKDQV-NHCGLHSKTTPTDEELAKLVRRCCKYKPCHDVRSGCRKHAAECGPTVRSTI 1344

Query: 369  ------------CTGSK------KVH-RGCCDSFRRECCIRSGHFEANLRGGLSEIVID 488
                        C+G K      K H  GCCDSFR+ECC +  H  A+  GGLSEIVI+
Sbjct: 1345 NILRDNHHHYLDCSGRKVCSLLEKRHIGGCCDSFRKECCAKKKHLGASFGGGLSEIVIE 1403


>gb|AFD32367.1| HMA2 transporter [Sedum alfredii]
          Length = 983

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/158 (30%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
 Frame = +3

Query: 18   EDIVEVDHDLESQNQHCHVDSCGTKKCSSSKNEHHLPQKEEDSAEDHEHKHGCSTTGCEN 197
            E I+ V+      + H H     T KC  +K  H       D    HE  H  +TT C  
Sbjct: 859  ESIIVVEEIQPKIHSHNHK----TSKCCEAKKPHC----STDDKNPHEQTHTNNTTNC-- 908

Query: 198  QETRPCQKSDKLCLESHCV-NHXXXXXXXXEERYHCKGRRGHGVSSVSCEDSTECNAVCT 374
                 C+K  +     HC  NH         E  H +    HG  SV+            
Sbjct: 909  -----CKKKSQELAPPHCQPNHTHNHGHKPSEMDHTR----HGCKSVA------------ 947

Query: 375  GSKKVHRGCCDSFRRECCIRSGHFEANLRGGLSEIVID 488
            G K+   GCC S+R+ECC  + H   N + GLSEIVI+
Sbjct: 948  GVKREMGGCCKSYRKECCAHNKH--GNFKKGLSEIVIE 983


>ref|XP_004242843.1| PREDICTED: cadmium/zinc-transporting ATPase HMA2-like [Solanum
            lycopersicum]
          Length = 1302

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 36/183 (19%)
 Frame = +3

Query: 48   ESQNQHCH----VDSCGTKKCSSSKNEHHLPQKEEDS-AEDHEHKHGCSTTGCENQETRP 212
            + ++ H H     DSC T++C  S  +H +   E  S   DH     C +   +     P
Sbjct: 1127 DKEHDHSHPEKAFDSCATQECCFSVQDHSIDISENGSQGTDH-----CDSI--KQSMVIP 1179

Query: 213  CQ-KSDKLCLESHCVNHXXXXXXXXE----ERYHCKGRRGHGVSSVSCEDSTECNA---- 365
            C  K       SHC  H        E     R  C  R  H V S     +TEC      
Sbjct: 1180 CSCKHTPQEKVSHCGFHSTTIPTDEELAKLVRRCCDYRPCHNVRSGCRNHATECGPTTRS 1239

Query: 366  --------------------VCTGSKKVH-RGCCDSFRRECCIRS-GHFEANLRGGLSEI 479
                                VC+  +K H  GCC+SFR+ECC ++  HF ++  GGLSEI
Sbjct: 1240 TINILRDNHHHHHLDCSGRKVCSPIEKRHIGGCCESFRKECCPKNINHFASSFGGGLSEI 1299

Query: 480  VID 488
            V++
Sbjct: 1300 VLE 1302


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