BLASTX nr result
ID: Mentha27_contig00029922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00029922
(705 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec... 52 3e-07
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] 52 3e-07
emb|CBI29772.3| unnamed protein product [Vitis vinifera] 52 3e-07
ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation spec... 52 5e-07
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr... 52 5e-07
gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus... 51 5e-07
ref|XP_007221460.1| hypothetical protein PRUPE_ppa020907mg, part... 52 2e-06
ref|XP_006357977.1| PREDICTED: cleavage and polyadenylation spec... 52 3e-06
gb|EPS69934.1| hypothetical protein M569_04826, partial [Genlise... 50 3e-06
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec... 52 6e-06
emb|CBI29794.3| unnamed protein product [Vitis vinifera] 52 6e-06
emb|CBI29789.3| unnamed protein product [Vitis vinifera] 52 6e-06
ref|XP_006878663.1| hypothetical protein AMTR_s00011p00266610 [A... 48 8e-06
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec... 54 8e-06
ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation spec... 52 8e-06
>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 694
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 29 LGAGNEVGRSCVYMSYKGKTILFDC 53
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS + EGD+LIITP
Sbjct: 10 LKRPDSSLTREGDQLIITP 28
>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
Length = 687
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 22 LGAGNEVGRSCVYMSYKGKTILFDC 46
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS + EGD+LIITP
Sbjct: 3 LKRPDSSLTREGDQLIITP 21
>emb|CBI29772.3| unnamed protein product [Vitis vinifera]
Length = 680
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 29 LGAGNEVGRSCVYMSYKGKTILFDC 53
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS + EGD+LIITP
Sbjct: 10 LKRPDSSLTREGDQLIITP 28
>ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 29 LGAGNEVGRSCVYMSYKGKTILFDC 53
Score = 28.1 bits (61), Expect(2) = 5e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR ++ S EGD+LIITP
Sbjct: 10 LKRRDAPVSREGDQLIITP 28
>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533874|gb|ESR44992.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 694
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 29 LGAGNEVGRSCVYMSYKGKTILFDC 53
Score = 28.1 bits (61), Expect(2) = 5e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR ++ S EGD+LIITP
Sbjct: 10 LKRRDAPVSREGDQLIITP 28
>gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus guttatus]
Length = 694
Score = 51.2 bits (121), Expect(2) = 5e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCV+MS+KGKT+MFDC
Sbjct: 29 LGAGNEVGRSCVHMSYKGKTVMFDC 53
Score = 29.3 bits (64), Expect(2) = 5e-07
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 583 SSTSTEGDELIITP 624
SSTS+EGDELIITP
Sbjct: 15 SSTSSEGDELIITP 28
>ref|XP_007221460.1| hypothetical protein PRUPE_ppa020907mg, partial [Prunus persica]
gi|462418194|gb|EMJ22659.1| hypothetical protein
PRUPE_ppa020907mg, partial [Prunus persica]
Length = 600
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKT++FDC
Sbjct: 29 LGAGNEVGRSCVYMSYKGKTVLFDC 53
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +S S E D+LIITP
Sbjct: 10 LKRREASASREDDKLIITP 28
>ref|XP_006357977.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Solanum tuberosum]
Length = 695
Score = 52.0 bits (123), Expect(2) = 3e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCV+M+FKGKTIMFDC
Sbjct: 30 LGAGNEVGRSCVFMTFKGKTIMFDC 54
Score = 25.8 bits (55), Expect(2) = 3e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR N + +GD+L+ITP
Sbjct: 11 LKRPNPGVNRDGDKLVITP 29
>gb|EPS69934.1| hypothetical protein M569_04826, partial [Genlisea aurea]
Length = 691
Score = 50.1 bits (118), Expect(2) = 3e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCV M+FKGKT+MFDC
Sbjct: 29 LGAGNEVGRSCVIMTFKGKTVMFDC 53
Score = 27.7 bits (60), Expect(2) = 3e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 574 RNNSSTSTEGDELIITP 624
+ S T+TEGDEL+ITP
Sbjct: 12 KRTSYTTTEGDELVITP 28
>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 693
Score = 52.4 bits (124), Expect(2) = 6e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 28 LGAGNEVGRSCVYMSYKGKTILFDC 52
Score = 24.3 bits (51), Expect(2) = 6e-06
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS T GD+LIITP
Sbjct: 10 LKRPDSSL-TRGDQLIITP 27
>emb|CBI29794.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 52.4 bits (124), Expect(2) = 6e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 28 LGAGNEVGRSCVYMSYKGKTILFDC 52
Score = 24.3 bits (51), Expect(2) = 6e-06
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS T GD+LIITP
Sbjct: 10 LKRPDSSL-TRGDQLIITP 27
>emb|CBI29789.3| unnamed protein product [Vitis vinifera]
Length = 314
Score = 52.4 bits (124), Expect(2) = 6e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 28 LGAGNEVGRSCVYMSYKGKTILFDC 52
Score = 24.3 bits (51), Expect(2) = 6e-06
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR +SS T GD+LIITP
Sbjct: 10 LKRPDSSL-TRGDQLIITP 27
>ref|XP_006878663.1| hypothetical protein AMTR_s00011p00266610 [Amborella trichopoda]
gi|548832006|gb|ERM94808.1| hypothetical protein
AMTR_s00011p00266610 [Amborella trichopoda]
Length = 705
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCV+MS+K KT++FDC
Sbjct: 29 LGAGNEVGRSCVFMSYKNKTVLFDC 53
Score = 28.1 bits (61), Expect(2) = 8e-06
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
+K+ SS S EGD+LIITP
Sbjct: 10 MKKRESSGSREGDQLIITP 28
>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 53.5 bits (127), Expect(2) = 8e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +2
Query: 611 SLLRLSAGNEVGRSCVYMSFKGKTIMFDC 697
+++ L AGNEVGRSCVYMS+KGKTI+FDC
Sbjct: 25 TIIPLGAGNEVGRSCVYMSYKGKTILFDC 53
Score = 22.7 bits (47), Expect(2) = 8e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 568 LKRNNSSTSTEGDELIITP 624
LKR + S EGD+L I P
Sbjct: 10 LKRRDVPVSREGDQLTIIP 28
>ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I isoform X1 [Glycine max]
gi|571493830|ref|XP_006592669.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-I isoform
X2 [Glycine max]
Length = 689
Score = 52.0 bits (123), Expect(2) = 8e-06
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 623 LSAGNEVGRSCVYMSFKGKTIMFDC 697
L AGNEVGRSCVYMS+KGKT++FDC
Sbjct: 26 LGAGNEVGRSCVYMSYKGKTVLFDC 50
Score = 24.3 bits (51), Expect(2) = 8e-06
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 571 KRNNSSTSTEGDELIITP 624
+R N+ +S E D+LI+TP
Sbjct: 8 RRENARSSREEDQLIVTP 25