BLASTX nr result

ID: Mentha27_contig00026579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00026579
         (264 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22694.1| hypothetical protein MIMGU_mgv1a011474mg [Mimulus...    67   3e-09
ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...    61   1e-07
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]    61   1e-07
ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Popu...    58   2e-06
ref|XP_002510776.1| RNA-binding region-containing protein, putat...    57   2e-06
ref|XP_007019702.1| RNA-binding family protein isoform 2, partia...    56   5e-06
ref|XP_007019701.1| RNA-binding family protein isoform 1 [Theobr...    56   5e-06
ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isofo...    55   8e-06
ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isofo...    55   8e-06
ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citr...    55   8e-06
ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citr...    55   8e-06

>gb|EYU22694.1| hypothetical protein MIMGU_mgv1a011474mg [Mimulus guttatus]
          Length = 280

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/66 (54%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHH--LYQGYSSINSTAVYPPHYGTPVSLA 245
           YYPYLN ++                  VQYPHH  L+Q YS INST +YP HYG PVSLA
Sbjct: 198 YYPYLNLNEAGSGGATPYSASQGGYG-VQYPHHHGLFQ-YSPINSTGIYPTHYGNPVSLA 255

Query: 246 PPTPLQ 263
           PPTPLQ
Sbjct: 256 PPTPLQ 261


>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
           gi|297734754|emb|CBI16988.3| unnamed protein product
           [Vitis vinifera]
          Length = 264

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/64 (48%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           +YPYL F +                  VQYPHHL Q YS+INST  YP HYG P+SLAP 
Sbjct: 193 FYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQ-YSAINSTGGYPQHYGAPMSLAPT 251

Query: 252 TPLQ 263
             LQ
Sbjct: 252 PALQ 255


>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
          Length = 269

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/64 (48%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           +YPYL F +                  VQYPHHL Q YS+INST  YP HYG P+SLAP 
Sbjct: 193 FYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQ-YSAINSTGGYPQHYGAPMSLAPT 251

Query: 252 TPLQ 263
             LQ
Sbjct: 252 PALQ 255


>ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Populus trichocarpa]
           gi|222858241|gb|EEE95788.1| hypothetical protein
           POPTR_0013s09120g [Populus trichocarpa]
          Length = 266

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAV-YPPHYGTPVSLAP 248
           +YPYL F +                  VQYPHHL+Q YSSINST   YP HYG P+SLAP
Sbjct: 194 FYPYLQFGEGSTGGATSYSNTSGQSYGVQYPHHLFQ-YSSINSTTGGYPQHYGAPMSLAP 252

Query: 249 PTPL 260
              L
Sbjct: 253 TAAL 256


>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223551477|gb|EEF52963.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 259

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 36/64 (56%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           +YPYL F +                  VQYPHHL+Q YS++NST  YP H+G P+SLAP 
Sbjct: 191 FYPYLQFGE---GSGGATSYSSSQNYNVQYPHHLFQ-YSAVNSTGGYPQHFGAPLSLAPT 246

Query: 252 TPLQ 263
             LQ
Sbjct: 247 ASLQ 250


>ref|XP_007019702.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
           gi|508725030|gb|EOY16927.1| RNA-binding family protein
           isoform 2, partial [Theobroma cacao]
          Length = 261

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           +YPYL F +                  VQYPHH +Q YS++NST  YP HYG P+SLAP 
Sbjct: 194 FYPYLQFGE---GTGGATGYTSGQGYGVQYPHHPFQ-YSAVNSTGSYPQHYGAPMSLAPT 249

Query: 252 TPLQ 263
             LQ
Sbjct: 250 PALQ 253


>ref|XP_007019701.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508725029|gb|EOY16926.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 344

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           +YPYL F +                  VQYPHH +Q YS++NST  YP HYG P+SLAP 
Sbjct: 194 FYPYLQFGE---GTGGATGYTSGQGYGVQYPHHPFQ-YSAVNSTGSYPQHYGAPMSLAPT 249

Query: 252 TPLQ 263
             LQ
Sbjct: 250 PALQ 253


>ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isoform X4 [Citrus sinensis]
          Length = 279

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           YYPYL F +                  VQYPHHL+  YS+IN+ A YP HYG P+S+AP 
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFP-YSTINAAAGYPQHYGPPMSIAPT 266

Query: 252 TPLQ 263
             LQ
Sbjct: 267 PALQ 270


>ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Citrus sinensis]
           gi|568849099|ref|XP_006478307.1| PREDICTED: RNA-binding
           protein 24-like isoform X2 [Citrus sinensis]
          Length = 286

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           YYPYL F +                  VQYPHHL+  YS+IN+ A YP HYG P+S+AP 
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFP-YSTINAAAGYPQHYGPPMSIAPT 266

Query: 252 TPLQ 263
             LQ
Sbjct: 267 PALQ 270


>ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
           gi|568849105|ref|XP_006478310.1| PREDICTED: RNA-binding
           protein 24-like isoform X5 [Citrus sinensis]
           gi|557544074|gb|ESR55052.1| hypothetical protein
           CICLE_v10021520mg [Citrus clementina]
          Length = 278

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           YYPYL F +                  VQYPHHL+  YS+IN+ A YP HYG P+S+AP 
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFP-YSTINAAAGYPQHYGPPMSIAPT 265

Query: 252 TPLQ 263
             LQ
Sbjct: 266 PALQ 269


>ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
           gi|568849101|ref|XP_006478308.1| PREDICTED: RNA-binding
           protein 24-like isoform X3 [Citrus sinensis]
           gi|557544073|gb|ESR55051.1| hypothetical protein
           CICLE_v10021520mg [Citrus clementina]
          Length = 285

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +3

Query: 72  YYPYLNFSDQXXXXXXXXXXXXXXXXXVQYPHHLYQGYSSINSTAVYPPHYGTPVSLAPP 251
           YYPYL F +                  VQYPHHL+  YS+IN+ A YP HYG P+S+AP 
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFP-YSTINAAAGYPQHYGPPMSIAPT 265

Query: 252 TPLQ 263
             LQ
Sbjct: 266 PALQ 269


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