BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00026498
         (2082 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   892   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   769   0.0  
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   728   0.0  
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   717   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   716   0.0  
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   705   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   705   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   702   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              699   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   699   0.0  
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   688   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   685   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   685   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   667   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   654   0.0  
ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr...   653   0.0  
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   649   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   643   0.0  
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps...   643   0.0  
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   641   0.0  

>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  892 bits (2306), Expect = 0.0
 Identities = 470/723 (65%), Positives = 542/723 (74%), Gaps = 31/723 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GLTEPGTLFKNLMAILRDVVIC+DGTVRNMCSNSI+QFEYGVNTANIASEFCAGDPVGVL
Sbjct: 773  GLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVL 832

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW+MMKEILLCGV FKND  DR V+LYL+ CDCGRKHC
Sbjct: 833  AATAMSNPAYKAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHC 892

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNI 1541
            QE+AAL VKN LK++SLK+ A+EFLIEYRSQ VHE+++ + GL VGHIHLNK+QL+QSNI
Sbjct: 893  QESAALVVKNQLKKVSLKDTAMEFLIEYRSQSVHESHETSHGL-VGHIHLNKTQLVQSNI 951

Query: 1540 ILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQGA 1361
             + DVLEKC++TI L  KKKKVGNLFK+++LS S+CCSFCQSSKSK T+VPCIQFFWQGA
Sbjct: 952  SMDDVLEKCRETIILQHKKKKVGNLFKKVELSVSDCCSFCQSSKSKLTDVPCIQFFWQGA 1011

Query: 1360 SDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELAV 1181
             D LLERAS  LADTVCPVLLQT+IKGDPR+STAN++W+SPDT TWIRSP KSP GELA+
Sbjct: 1012 PDNLLERASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPTWIRSPSKSPIGELAL 1071

Query: 1180 DITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQRL 1001
            DI LEKEAV KSGDAWRVVMDSCLPV HLID+QRSIPY IKQ++ LLGISCAFEQAVQRL
Sbjct: 1072 DIVLEKEAVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQELLGISCAFEQAVQRL 1131

Query: 1000 STSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPRK 821
            STSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFN+GGIK+LS+ L VQVPFMNATLFTPRK
Sbjct: 1132 STSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLGVQVPFMNATLFTPRK 1191

Query: 820  CFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLRM 641
            CFE+AAEKC VDNLSSIV SCAWGKHVSVGTGSPFEI+W T+   +  D+EIDVY+FL M
Sbjct: 1192 CFEKAAEKCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYDFLHM 1251

Query: 640  VNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDII-------GDSNG 482
            VNSS LEDAGTSCLGA+I         D +LSPVR+ G+EKPTFE  +       G S  
Sbjct: 1252 VNSSKLEDAGTSCLGADIEDLGQEDYMDLDLSPVREPGSEKPTFECEVEFGLNGDGFSKE 1311

Query: 481  ISKEDDGGWSSLGTKA---EGWNSN---SAWGKKVDYDEPSDASGWESKKADESTPSTAW 320
              KE +  WSS G K    + W      + WGKKVD +        +  K DE   S++W
Sbjct: 1312 GGKESEDSWSSWGKKVDTEDDWTKKAELTTWGKKVDREADDWILKGQKSKTDEEN-SSSW 1370

Query: 319  GSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTWETKVADESTHSK------AWGSSNK 158
            G    ES++  W    ++S   +  Q   S  N W TK   +ST  +      AWG   K
Sbjct: 1371 G-KKVESDAGGWGRKPEQSTGGSTGQT-RSIDNDW-TKAGQQSTFDEDAQTGSAWG-KKK 1426

Query: 157  ESESNNWHSFQKISNDSTPAQSWGSKNDT----WETKVADES--------TPSKAWGSSN 14
            ES++  W       N  + A  WG K ++    W  KV  ++        + +  WG   
Sbjct: 1427 ESDAGGWG-----KNVESDAGGWGKKVESDAGGWGKKVESDAGGWGKQVDSDAGGWGKKP 1481

Query: 13   KES 5
            ++S
Sbjct: 1482 EQS 1484


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  769 bits (1985), Expect = 0.0
 Identities = 387/624 (62%), Positives = 472/624 (75%), Gaps = 6/624 (0%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSI+QFEY  N+ +I +EFCAGDPVGVL
Sbjct: 773  GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGVL 832

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AAT+MSNPAYKAVLD       +W MMK+ILLC   FKND +DR V+LYL  C+CGRKHC
Sbjct: 833  AATSMSNPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKHC 892

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNI 1541
            QET AL V+NHLK+++LK+ A++FLIEY  QL     +G  GL VGHIHL++ +L++SN+
Sbjct: 893  QETGALVVQNHLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPGL-VGHIHLSEMELIRSNV 951

Query: 1540 ILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQGA 1361
                + E C +TINL +KKKKVGNLFK+I LSYS+ C+FC SSKSK T VPC+QF W GA
Sbjct: 952  NKDRIFEGCLETINLYEKKKKVGNLFKKIKLSYSDHCTFCASSKSKRTEVPCVQFLWNGA 1011

Query: 1360 SDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELAV 1181
             D + ++ S +L+DTVCP LLQTVIKGDPRVSTA ++W+SP TATWIRSP K+  GE+A+
Sbjct: 1012 IDDI-DKVSHLLSDTVCPALLQTVIKGDPRVSTAEIVWVSPGTATWIRSPSKNLNGEMAI 1070

Query: 1180 DITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQRL 1001
            ++  EKEA   SGDAWRV MDSC+PV HLID++RSIPYAIKQ++ LLGISCAFEQAVQRL
Sbjct: 1071 EVVFEKEAARHSGDAWRVAMDSCVPVMHLIDTKRSIPYAIKQVQELLGISCAFEQAVQRL 1130

Query: 1000 STSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPRK 821
            STSVTMVTKGVLKDH+LLLGN+MTCAGTLIGFN+GGIK+LS+SLD+ VPFM ATLFTPRK
Sbjct: 1131 STSVTMVTKGVLKDHILLLGNNMTCAGTLIGFNSGGIKALSQSLDLHVPFMTATLFTPRK 1190

Query: 820  CFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLRM 641
            CFERAAEKC+VD L+S+VGSCAWGKHVSVGTGSPFEI+W T+  ++  D+E+DVY FL +
Sbjct: 1191 CFERAAEKCHVDKLTSVVGSCAWGKHVSVGTGSPFEILWDTRKTDLNPDKELDVYGFLHL 1250

Query: 640  VNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDI----IGDSNGISK 473
            VN S   D GTSC+G EI         DFELSP R+ G EKPTF+D     +  + G++ 
Sbjct: 1251 VNGSVPLDMGTSCIGTEI-EDLDQELMDFELSPEREPGLEKPTFDDEHEFGMNSNEGVT- 1308

Query: 472  EDDGGWSSLGTKAEGWNSNSAWGKKVDYDEPSDASGWESKKADE--STPSTAWGSSNKES 299
            E  G WSS G         + W  KV      +++GW S    E  +    +WG + ++ 
Sbjct: 1309 EVKGSWSSWGNVVA--PDTNDWSNKV------ESTGWGSAVNSELKNKNEDSWGQNEEKP 1360

Query: 298  ESNDWNPIKKKSNDSTPSQDWGSK 227
            +   W   K+KS+D+     WG K
Sbjct: 1361 DDTVWGQ-KEKSDDTV----WGQK 1379


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  728 bits (1878), Expect = 0.0
 Identities = 397/697 (56%), Positives = 482/697 (69%), Gaps = 33/697 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNT-ANIASEFCAGDPVGV 1904
            GLTEPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+QFEYG +  +N+ SEFCAGDPVGV
Sbjct: 775  GLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGV 834

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW+MMKEILLCGV FKND +DR V+LYLN C C R +
Sbjct: 835  LAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGY 894

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRS-QLVHENYDGNSGLLVGHIHLNKSQLMQS 1547
            C+E AA  VKNHL ++ LK+AA EFLIEY   Q  +EN +  +GL +GHI LN+ QL   
Sbjct: 895  CREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGL-IGHIRLNQGQLENL 953

Query: 1546 NIILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQ 1367
             I + +V E+CQ+ I+  QKKKK+GNLFKRI LS SE CSFC +S SK  N PC++F W 
Sbjct: 954  GISVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 1013

Query: 1366 GASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGEL 1187
             ASD  LER S ILAD +CP+LL TVIKGDPRVS+AN+ WISPDT +WIRSP KS +GEL
Sbjct: 1014 DASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGEL 1073

Query: 1186 AVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQ 1007
            A+DI LEKEAV + GDAWR++MDSCLPV HLID+ RSIPYAIKQ++ L+GISCAFEQAV+
Sbjct: 1074 ALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVK 1133

Query: 1006 RLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTP 827
            RLSTSVTMVTKGVLKDHL+LL NSMTCAG L+GFN GGIK+LS+SL+VQ+PF  ATLFTP
Sbjct: 1134 RLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTP 1193

Query: 826  RKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFL 647
            RKCFERAAEKC+VD+LSSIV SC+WGKHV+VGTGS FE++  T++V   + +  DVY+FL
Sbjct: 1194 RKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFL 1253

Query: 646  RMV-NSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDII--------- 497
             +V N+S  E  GTSCLGAEI            LSP RDSG+E PTFED           
Sbjct: 1254 HLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFDYNENLD 1313

Query: 496  -GDSNGI--------SKEDDGGWSSLGTKAEG-------WNSNSAWGKKVDYDEPSDASG 365
             G  +G         S +  G W   G    G        +S SAWGKKV  DEP + + 
Sbjct: 1314 EGKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKV--DEPEN-NR 1370

Query: 364  WESKKADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTWETKVADESTH 185
             +S   ++S   ++WG    E +   W+  K+ +++S+    WG   N            
Sbjct: 1371 QQSGSGEQSGSWSSWG-KKVEKDGGSWDEPKQLNSESS----WGKAPN------GGGLGS 1419

Query: 184  SKAWGSSNKESESNNWHSF-----QKISNDSTPAQSW 89
            + A G+   +   N+W S      QK +N     + W
Sbjct: 1420 ATAEGNKRLDQSVNDWSSSVSRDGQKXTNTXXLYKKW 1456


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  717 bits (1850), Expect = 0.0
 Identities = 388/768 (50%), Positives = 493/768 (64%), Gaps = 76/768 (9%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GL EPGTLFKNLMA+LRDVVICYDGTVRN+ SNS++QFEYGV      + F AGDPVGVL
Sbjct: 575  GLAEPGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGGMQSQNLFPAGDPVGVL 634

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SWDMMKEIL C   F+ND  DR V+LYLN C CGRK+C
Sbjct: 635  AATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRANFRNDINDRRVILYLNDCCCGRKYC 694

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEY-RSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            QE A+  VKNHLK++SL++AAIE  IEY R +L  E+ + ++GL VGHIHLN   L  S 
Sbjct: 695  QENASCLVKNHLKKVSLRDAAIELAIEYKRPKLEPESCEIDAGL-VGHIHLNSGLLKASG 753

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I + D+L+KC++ +NL +KKKK G  FKRI LS S+CC F   S SKWT++PC++FFWQ 
Sbjct: 754  IGMHDILQKCEEQVNLLRKKKKYGYHFKRILLSVSDCCFF-NHSDSKWTDMPCLKFFWQD 812

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
             +D  LER   I+AD +CPVLL T+IKGDPR+ST N+IWI+P T TW++SPC S KGELA
Sbjct: 813  MTDTDLERTKHIMADMICPVLLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSSTKGELA 872

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            V++ LEKEAV  +GDAWR+V+D CLPVFHLID++RSIPYAIKQI+ L GISCAF+QAVQR
Sbjct: 873  VEVALEKEAVRLTGDAWRIVLDCCLPVFHLIDTRRSIPYAIKQIQDLFGISCAFDQAVQR 932

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LSTSVTMVTKGVLK+HLLLL +SMTCAG L+GFNT GIK+L ++L+VQVPF  ATL+TPR
Sbjct: 933  LSTSVTMVTKGVLKEHLLLLASSMTCAGNLVGFNTSGIKALCRALNVQVPFTEATLYTPR 992

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFERA+EKC+VD L+SIVGSC+WGK VS+GTG+ F+++W TK +  M D+  DVYNFL 
Sbjct: 993  KCFERASEKCHVDTLASIVGSCSWGKRVSIGTGAKFDLLWETKEIE-MADKPTDVYNFLH 1051

Query: 643  MVNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDI--IGDSNGISKE 470
            +V+S+  E+  +  LG +I         +  LSP +++   K  FE+   IG  + I+  
Sbjct: 1052 LVSSANEEEVDSGGLGEDIESFEKDVYMEPALSPEQEN---KAVFEETLEIGVDSDITGA 1108

Query: 469  DDGGWSSLGTKAEGWNSN-------------SAWGKKVDYDEPSDAS---GW-------- 362
            D+  W +  +   GWN+N             S+WG K D   P D+S   GW        
Sbjct: 1109 DESSWDAFPSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANPEDSSKTGGWSSGGSKQK 1168

Query: 361  ----ESKKADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGS---KQNTWE--- 212
                +S K+     S +WG SN+   S  W    K +ND +   D GS   +   W    
Sbjct: 1169 PQPEDSSKSGGWDASKSWGGSNQGDPSPVWGQPVKATNDISIENDHGSGSAEGGGWANSG 1228

Query: 211  -----TKVADEST-----------------HSKAWGSSNKESESNNW---HSFQKISNDS 107
                 +K  + ST                  S AWG+  K  ++N W    S + +++ S
Sbjct: 1229 MKKDLSKQENSSTAGGWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGS 1288

Query: 106  TP---AQSWGSKNDT-----------WETKVADESTPSKAWGSSNKES 5
                    WG K D            W    +    PS AWG   +E+
Sbjct: 1289 VEDGGCSGWGPKKDLLQPEDSAGENGWGASKSKSKEPSSAWGKPAQET 1336



 Score = 62.4 bits (150), Expect = 8e-07
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
 Frame = -3

Query: 493  DSNGISKEDDGGWSSLGTKAEGWNSNSAWGKKVDYDEPSDASG---WESKKADESTPSTA 323
            D+NG  K D     + G+  +G    S WG K D  +P D++G   W + K+    PS+A
Sbjct: 1271 DNNGWKKSDSKKDLASGSVEDG--GCSGWGPKKDLLQPEDSAGENGWGASKSKSKEPSSA 1328

Query: 322  WGSSNKESESNDW--NPIKKKSNDSTPSQDWGSKQNTWETKVADES--THSKAW------ 173
            WG   +E+++  W  N  ++ S +   +  W  K        + +S    SK W      
Sbjct: 1329 WGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQKENKSFSKQSQPASSKDWDSTGNI 1388

Query: 172  --GSSNKESESNNWHSFQKISNDSTPAQSWG-SKNDTWETKVADE---STPSKAWGSSNK 11
              GS+    E  N   +   SN S    +WG +  ++W+    DE         WG S+K
Sbjct: 1389 TAGSTGFGVEKGNEKPWDVASNVSVKKSTWGQTGGNSWKKNEQDEKDGDPQGLPWGKSHK 1448

Query: 10   ES 5
             S
Sbjct: 1449 SS 1450


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  716 bits (1848), Expect = 0.0
 Identities = 373/717 (52%), Positives = 474/717 (66%), Gaps = 30/717 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GL+EPGTLFKNLMA+LRDVVICYDGTVRN+CSNSI+QF+Y VN     S F AG+PVGVL
Sbjct: 775  GLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVL 834

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW++MKEILLC V F ND  DR V+LYLN C CGRK+C
Sbjct: 835  AATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYC 894

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNI 1541
            QE AA  VKN LKR+SLK+AA+EFLIEY+   +  + +G    LVGHIHLNK  L    I
Sbjct: 895  QERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISDDEG----LVGHIHLNKILLEDLRI 950

Query: 1540 ILSDVLEKCQDTINL---NQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFW 1370
             + D+L KCQ+T+      +K KKV   FK   LS SECCSF QS   K +N+PC+ F  
Sbjct: 951  SMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFVL 1010

Query: 1369 QGASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGE 1190
            +GASD  L++ S +LA+ + PVLL+T+IKGDPR+ +AN+IWISPDT  WIR+P K+ KGE
Sbjct: 1011 RGASDSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSKNRKGE 1070

Query: 1189 LAVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAV 1010
            LA+D+ LEK  V +SGDAWR V+DSCLPVFHLID++RS+PYAIKQ++ LLG+SCAFEQAV
Sbjct: 1071 LALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAV 1130

Query: 1009 QRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFT 830
            QRLS SVTMV KGVLK+HL+LL NSMTCAG L+GFN+GG K+LS+SL+VQVPF  ATLFT
Sbjct: 1131 QRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFT 1190

Query: 829  PRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNF 650
            PRKCFE+AAEKC+ DNLSS+V +C+WGKHV+VGTGS F+++W T++     D+ +DVY+F
Sbjct: 1191 PRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDF 1250

Query: 649  LRMVNSST-LEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGIS- 476
            L MV SST +E++ T CLG E+         D+ LSP  +  ++KP FED++ D + +  
Sbjct: 1251 LHMVRSSTGIEESDTGCLGEEV--DGLEDEFDWSLSPEHNLCSDKPVFEDLVEDQSWLEN 1308

Query: 475  --------------KEDDGGWSSLGTKAE----GWNSNSAWGKKVDYDEPSDASGWESKK 350
                          K  +  W  LGT  E    GW +  AWGK    D+  + +G  S+K
Sbjct: 1309 KQENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGK--SSDDKLEKAGSPSRK 1366

Query: 349  ADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTWETKVADESTHSKAWG 170
                    +WG S+ +   N  +P  K  ++      WG         V+  +  S  WG
Sbjct: 1367 PSGWGTEASWGESSCDKWENVGSPAAKSFSEWGTEASWGKSFGDKPENVSPAAKTSSGWG 1426

Query: 169  SSNKESESNNWHSFQKISNDSTPAQSWGSK-------NDTWETKVADESTPSKAWGS 20
            S     +S+         + S P   WG+K        D  E      + PS AWG+
Sbjct: 1427 SEASWGKSSGDRQENVGGSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGT 1483


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  705 bits (1820), Expect = 0.0
 Identities = 390/692 (56%), Positives = 469/692 (67%), Gaps = 28/692 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNT-ANIASEFCAGDPVGV 1904
            GLTEPGTLF NLMAILRDVVICYDGTVRN+ SNSI+QFEYG +  +N+ SEFCAGDPVGV
Sbjct: 326  GLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGV 385

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKA LD       SW+MMKEILLCGV FKND +DR V+LYLN C C R +
Sbjct: 386  LAATAMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGY 445

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRS-QLVHENYDGNSGLLVGHIHLNKSQLMQS 1547
            C+E AA  VKNHL ++ LK+AA EFLIEY   Q  +EN +  +GL +GHI LN+ QL   
Sbjct: 446  CREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGL-IGHIRLNQGQLENL 504

Query: 1546 NIILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQ 1367
             I + +V E+CQ+ I+  + KKK+GNLFKRI LS SE CSFC +S SK  N PC++F W 
Sbjct: 505  GISVLEVHERCQENISSFRXKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 564

Query: 1366 GASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGEL 1187
             ASD  LER S ILAD + P+LL TVIKGDPRVS+AN+ WISPDT +WIRSP KS +GEL
Sbjct: 565  DASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGEL 624

Query: 1186 AVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQ 1007
            A+DI LEKEAV   GDAWR +MDSCLPV HLID+ RSIPYAIKQ++ L+GISCAFEQAV 
Sbjct: 625  ALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVX 684

Query: 1006 RLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTP 827
            RLSTSVTMVTKGVLKDHL+LL NSMTCAG L+GFN GGIK+LS+SL+VQ+PF  ATLFTP
Sbjct: 685  RLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTP 744

Query: 826  RKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFL 647
            RKCFERAAEKC+VD+LSSIV SC+WGKHV+VGTGS FE++  T++V   + +  DVY+FL
Sbjct: 745  RKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFL 804

Query: 646  RMV-NSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDII--------- 497
             +V N+S  E  GTSCLGAEI            LSP RDSG+E PTFED           
Sbjct: 805  HLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFDYNENLD 864

Query: 496  -GDSNGISKED--------DGGWSSLGTKAEG-------WNSNSAWGKKVDYDEPSDASG 365
             G  +G + E+         G W   G    G        +S S+WGKKV  DEP + + 
Sbjct: 865  EGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSSWGKKV--DEPEN-NR 921

Query: 364  WESKKADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTWETKVADESTH 185
             +S   ++S   + WG   K+       P +  S  S     WG   N            
Sbjct: 922  QQSGSGEQSGSWSPWGRRWKKMVVLGDEPKQLNSESS-----WGKAPN------GGGLGS 970

Query: 184  SKAWGSSNKESESNNWHSFQKISNDSTPAQSW 89
            + A G+   +   N+W S   +S D    + W
Sbjct: 971  ATAEGNRRLDQSVNDWSS--SVSRDGQYKKWW 1000


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  705 bits (1819), Expect = 0.0
 Identities = 373/718 (51%), Positives = 473/718 (65%), Gaps = 31/718 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GL+EPGTLFKNLMA+LRDVVICYDGTVRN+CSNSI+QF+Y VN     S F AG+PVGVL
Sbjct: 776  GLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVL 835

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW++MKEILLC V F ND  DR V+LYLN C CGRK+C
Sbjct: 836  AATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYC 895

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNI 1541
            QE AA  VKN LKR+SLK+AA+EFLIEY+   +  + +G    LVGHIHLNK  L    I
Sbjct: 896  QERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISDDEG----LVGHIHLNKILLEDLRI 951

Query: 1540 ILSDVLEKCQDTINL---NQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFW 1370
             + D+L KCQ+T+      +K KKV   FK   LS SECCSF QS   K +N+PC+ F  
Sbjct: 952  SMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVL 1011

Query: 1369 QGASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGE 1190
            +GASD  L++ S +LA+ + PVLL+T+IKGDPR+ +AN+IWISPDT  WIR+P K+ KGE
Sbjct: 1012 RGASDSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKGE 1071

Query: 1189 LAVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAV 1010
            LA+D+ LEK  V +SGDAWR V+DSCLPVFHLID++RS+PYAIKQ++ LLG+SCAFEQAV
Sbjct: 1072 LALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAV 1131

Query: 1009 QRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFT 830
            QRLS SVTMV KGVLK+HL+LL NSMTCAG L+GFN+GG K+LS+SL+VQVPF  ATLF 
Sbjct: 1132 QRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFM 1191

Query: 829  PRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNF 650
            PRKCFE+AAEK + DNLSS+V +C+WGKHV+VGTGS F+++W T++     D+ +DVY+F
Sbjct: 1192 PRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDF 1251

Query: 649  LRMVNSST-LEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGIS- 476
            L MV SST +E+  T CLG E+         D+ LSP  +  ++KP FED++ D + +  
Sbjct: 1252 LHMVRSSTGIEELDTGCLGEEV--DGLEDEFDWSLSPEHNLCSDKPIFEDLVEDQSWLEN 1309

Query: 475  --------------KEDDGGWSSLGTKAE----GWNSNSAWGKKVDYDEPSDASGWESKK 350
                          K  +  W  LGT  E    GW +  AWGK    D+  + +G  S+K
Sbjct: 1310 KQENENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGK--SSDDKLEKAGSPSRK 1367

Query: 349  ADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDW----GSKQNTWETKVADEST-- 188
                    +WG S+ +   N  +P  K  ++      W    G K     +  A  S+  
Sbjct: 1368 PSGWGTEASWGESSSDKWENVGSPAAKSFSEWGTEASWGKSFGDKPENVRSPAAKTSSGW 1427

Query: 187  -HSKAWGSSNKESESNNWHSFQKISNDSTPAQSWG-SKNDTWETKVADESTPSKAWGS 20
                +WG S  + + N   S  K  +      SWG S  D  E      + PS AWG+
Sbjct: 1428 GSEASWGKSPGDRQENVGRSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGT 1485


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  702 bits (1811), Expect = 0.0
 Identities = 383/737 (51%), Positives = 481/737 (65%), Gaps = 45/737 (6%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIA-SEFCAGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+QFEYGV     + S F AG+PVGV
Sbjct: 781  GLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVGV 840

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SWDMMKEILLC VGFKND ADR V+LYLN C CGR +
Sbjct: 841  LAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRNY 900

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            CQE AA  VKNHL+++SLK+ A  F+IEY+SQ + E++  ++GL VGH+HL+K +L   N
Sbjct: 901  CQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQIPESFGSDAGL-VGHVHLDKRKLQDLN 959

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I    +LEKCQ+T+N  +KKKKVGNLFK+  L  SE CSF Q         PC+ FFWQG
Sbjct: 960  ITAQVILEKCQETVNTFRKKKKVGNLFKKTILLVSESCSFQQCIDES----PCLMFFWQG 1015

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
            A DV LER S+ILAD +CPVLL+T+IKGD R+S AN+IW +P+T TWIR+P ++ KGELA
Sbjct: 1016 ADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNPSRTQKGELA 1075

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +DI LEK  V KSGDAWR+V+DSCLPV HLI++ RSIPYAIKQ++ LLG+SCAF+ AVQR
Sbjct: 1076 LDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQR 1135

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LS SVTMV KGVLK+HL+LLGNSMTCAG+LIGF TGG K+LS+SLD+QVPF  ATLFTPR
Sbjct: 1136 LSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPR 1195

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFE+AAEKC+ D+LSSIV SCAWGKHV+VGTGS F+++W TK   +  +  +DVY+FL 
Sbjct: 1196 KCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFLN 1255

Query: 643  MVNSST-LEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGISKED 467
            MV S+   E++ T+CLGAE+         D+ LSP  +S ++KPTFED     + +  + 
Sbjct: 1256 MVRSTAGGEESVTACLGAEV-DDLMLEDEDWNLSPEHNSSSDKPTFEDSAEFQDFLGNQP 1314

Query: 466  -DGGWSSLGT--------------KAEGWNSNSAWGKKVDYDEPSD--ASGWESKKADES 338
             +  W  + +              K +G      W   ++  E +D  +SGW++  A   
Sbjct: 1315 AESNWEKISSLKDRSRSSGNWDVDKNDGAVKEKPWSLGMNTAEANDVASSGWDTAAA--R 1372

Query: 337  TPSTAWGSSNKESESNDWNPIKKK------------------SNDSTPSQDWGSKQNTWE 212
            T + +W S N  ++SN ++    K                  SND      WG K    +
Sbjct: 1373 TTNNSWNSENNVAQSNSFSGWATKKPEPHNGFATKVQEEPTTSNDWDAGAAWGRKDR--D 1430

Query: 211  TKVADESTHSKAWGSSNKESESNNWHSFQKISND-STPAQSWGSKNDT------WETKVA 53
             K A+ +     WG      ES    S  K   D       W  K         W +K  
Sbjct: 1431 NKFAETNASKSWWGKVTDGDESGQNKSKNKRPEDQDVGTHGWDDKMSQDQSISGWASKTT 1490

Query: 52   DE-STPSKAWGSSNKES 5
             E +T S  W S    +
Sbjct: 1491 QEATTESLGWDSKGNSN 1507


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  699 bits (1803), Expect = 0.0
 Identities = 376/742 (50%), Positives = 469/742 (63%), Gaps = 54/742 (7%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFC-AGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYGV        F  AG+PVGV
Sbjct: 835  GLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGV 894

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKEILLC V FKND  DR V+LYLN CDCGRK+
Sbjct: 895  LAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKY 954

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA  VKN LK+ SLK+ A+EF+IEY  Q            LVGHIHLNK  L   N
Sbjct: 955  CRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLN 1014

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            + + +V +KC++TIN  +KKK VG  FK+I LS+ ECC+F  S +SK +++PC+ FFWQG
Sbjct: 1015 VSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQG 1074

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  LE+   ILA  +CPVLLQT+IKGD RV T N+IWISPDT TWIR+PCKS KGELA
Sbjct: 1075 NRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELA 1134

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +DI LEK AV + GDAWR+V+D+CLPV HLID++RSIPYAIKQ++ LLGISCAF+QAVQR
Sbjct: 1135 LDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQR 1194

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LS SVTMV KGVLK+HL+LL NSMTCAG LIGFN+GG K+LS++L++QVPF  ATLFTPR
Sbjct: 1195 LSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPR 1254

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFE+A+EKC+ D+LSSIV SC+WGKHV+VGTGS F+++W TK +    D  ID+Y+FL 
Sbjct: 1255 KCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLH 1314

Query: 643  MVNSSTL-EDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGISKE 470
            +V S +  ++  T+CLGAE+          +  +SP   S  EKP FED     N     
Sbjct: 1315 LVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWENH 1374

Query: 469  DDG---------------------GWSSLGT------------------KAEGWNSNSAW 407
              G                      WSS GT                  ++ GW+    W
Sbjct: 1375 VPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGTW 1434

Query: 406  G---------KKVDYDEPSDASGWES-KKADESTPSTAWGSSNKESESNDWNPIKKKSND 257
            G         ++   D P  +   E+ +       S+AWG    E++   WN      ND
Sbjct: 1435 GTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGWN-----KND 1489

Query: 256  STPSQDWGSKQNTWETKVADESTHSKAWG--SSNKESESNNWHSFQKISNDSTPAQSWGS 83
              P  D   +   W+ KVA E T    +G  SS       N    + + +D +P      
Sbjct: 1490 GKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDESPVNEHSW 1549

Query: 82   KNDTWETKVADESTPSKAWGSS 17
              +  E  +A ++T S  W SS
Sbjct: 1550 DANLPEDPLA-QATTSVGWDSS 1570


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  699 bits (1803), Expect = 0.0
 Identities = 376/742 (50%), Positives = 469/742 (63%), Gaps = 54/742 (7%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFC-AGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYGV        F  AG+PVGV
Sbjct: 775  GLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGV 834

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKEILLC V FKND  DR V+LYLN CDCGRK+
Sbjct: 835  LAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKY 894

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA  VKN LK+ SLK+ A+EF+IEY  Q            LVGHIHLNK  L   N
Sbjct: 895  CRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLN 954

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            + + +V +KC++TIN  +KKK VG  FK+I LS+ ECC+F  S +SK +++PC+ FFWQG
Sbjct: 955  VSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQG 1014

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  LE+   ILA  +CPVLLQT+IKGD RV T N+IWISPDT TWIR+PCKS KGELA
Sbjct: 1015 NRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELA 1074

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +DI LEK AV + GDAWR+V+D+CLPV HLID++RSIPYAIKQ++ LLGISCAF+QAVQR
Sbjct: 1075 LDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQR 1134

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LS SVTMV KGVLK+HL+LL NSMTCAG LIGFN+GG K+LS++L++QVPF  ATLFTPR
Sbjct: 1135 LSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPR 1194

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFE+A+EKC+ D+LSSIV SC+WGKHV+VGTGS F+++W TK +    D  ID+Y+FL 
Sbjct: 1195 KCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLH 1254

Query: 643  MVNSSTL-EDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGISKE 470
            +V S +  ++  T+CLGAE+          +  +SP   S  EKP FED     N     
Sbjct: 1255 LVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWENH 1314

Query: 469  DDG---------------------GWSSLGT------------------KAEGWNSNSAW 407
              G                      WSS GT                  ++ GW+    W
Sbjct: 1315 VPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGTW 1374

Query: 406  G---------KKVDYDEPSDASGWES-KKADESTPSTAWGSSNKESESNDWNPIKKKSND 257
            G         ++   D P  +   E+ +       S+AWG    E++   WN      ND
Sbjct: 1375 GTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGWN-----KND 1429

Query: 256  STPSQDWGSKQNTWETKVADESTHSKAWG--SSNKESESNNWHSFQKISNDSTPAQSWGS 83
              P  D   +   W+ KVA E T    +G  SS       N    + + +D +P      
Sbjct: 1430 GKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDESPVNEHSW 1489

Query: 82   KNDTWETKVADESTPSKAWGSS 17
              +  E  +A ++T S  W SS
Sbjct: 1490 DANLPEDPLA-QATTSVGWDSS 1510


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  688 bits (1775), Expect = 0.0
 Identities = 376/749 (50%), Positives = 492/749 (65%), Gaps = 63/749 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGV 1904
            GL+EPGTLFKNLMA LRDVVICYDGTVRN+CSNSI+QFEYGV + +     F AG+PVGV
Sbjct: 774  GLSEPGTLFKNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGPENLFPAGEPVGV 833

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SWD+MKEILLC V FKN+  DR V+LYLN C CGRK+
Sbjct: 834  LAATAMSNPAYKAVLDSTPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYLNDCGCGRKY 893

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA  VKN LK++SLK+ A+EF+IEY+ +    + + +SGL VGH+HLN+  L + N
Sbjct: 894  CREHAAYLVKNRLKKVSLKDTAVEFMIEYQKERAAGSMEIDSGL-VGHVHLNEMLLRELN 952

Query: 1543 IILSDVLEKCQDTINLNQKKK-----KVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQ 1379
            + +S++L+KC++TIN  ++KK      +G +FKR  LSYSECCSF QSS    +  PC+ 
Sbjct: 953  LGMSEILQKCEETINSFRRKKVGKKMNIGEIFKRTILSYSECCSFHQSSADNRSGSPCLM 1012

Query: 1378 FFWQGASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSP 1199
            FF+Q  ++  LE  S +LAD +CPVLL+TVIKGDPR+S+AN+IWI+ ++ TWIRSP KS 
Sbjct: 1013 FFYQDFNNSELEAISQMLADFICPVLLKTVIKGDPRISSANIIWINSESTTWIRSPNKSL 1072

Query: 1198 KGELAVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFE 1019
            KGELA+D+ LEK  V +SGDAWR+ +D CLPV HLID++RSIPYAIKQ++ LLG+SCAF+
Sbjct: 1073 KGELALDVVLEKSVVKQSGDAWRIALDCCLPVLHLIDTRRSIPYAIKQVQELLGVSCAFD 1132

Query: 1018 QAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNAT 839
            QAVQRL+ +V MV KGVLK+HL+LL NSMTCAG  +GFN GG K+LS++L++QVPF  AT
Sbjct: 1133 QAVQRLAKAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALSRALNIQVPFTEAT 1192

Query: 838  LFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDV 659
            LFTP+KCFERAAEKC++D+LSSIV SC+WGKHV+VGTGS FEI+W TK   +     +DV
Sbjct: 1193 LFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTKEGGLNEVGGVDV 1252

Query: 658  YNFLRMVNSSTLEDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDIIG-DSN 485
            +NFL MVN++  E+  T+ LG EI          D  LSP  +S ++KP FEDI+    N
Sbjct: 1253 FNFLHMVNAANGEELTTAALGTEIDDLVPDYENGDVSLSPEHNSSSDKPVFEDIVEFPDN 1312

Query: 484  GISKEDDGGWSSLGTKAEG---W-----------------NSNSAWGKKVDYDEPSD--- 374
              +      W S+ T + G   W                 +S SAWG K   ++ +    
Sbjct: 1313 FENVPGKSSWDSIYTASTGGKDWGAVKIGTQDGISAETQADSTSAWGIKTPREDDTSPWG 1372

Query: 373  ---------ASGWESKKADESTPSTAWG-SSNKESESNDWNPIKKKSNDSTPS------- 245
                      S W +K   E  PS AWG  + +E   + W   K  + D++ +       
Sbjct: 1373 TAKTATEDAPSAWGTKTVKEDAPS-AWGIKTAREDARSPWGTAKTATEDASSATAREDAP 1431

Query: 244  QDWGSKQ-------NTWETKVADESTHSKAWGSSN-KESESNNWHSFQKISNDSTPAQSW 89
              WG+ +       + W TK   E   S AWG+   +E   + W + ++ + D+  A  W
Sbjct: 1432 SPWGTAKTATGDALSAWGTKTLKEDAPS-AWGTKTVREDAPSPWGTAKRATEDAPAA--W 1488

Query: 88   GSKNDT------WET-KVADESTPSKAWG 23
            G+K+ T      W T K A E  PS AWG
Sbjct: 1489 GAKSATEDAPPPWGTAKTAAEDAPS-AWG 1516


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  685 bits (1768), Expect = 0.0
 Identities = 375/756 (49%), Positives = 483/756 (63%), Gaps = 64/756 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+QF+YG+N A    +F AG+PVGVL
Sbjct: 776  GLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVL 834

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW++MKEILLC V  KND  DR V+LYL  CDCGRK+C
Sbjct: 835  AATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYC 894

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQ-LVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            QE AA  VKNHL+++ LK+ A+E + EY+ Q  V E+  G    LVGHI LNK+ L + N
Sbjct: 895  QENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAG----LVGHILLNKAVLKELN 950

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I + +V  KCQ+TI   +KKKK  + FKR DL +SECCS  QS   KW ++ C+ FF + 
Sbjct: 951  ISMQEVHMKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRN 1010

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  L+     L D + PVLL+TVIKGDPR+ +AN+IW+SPDT TWIRSP K+ KGELA
Sbjct: 1011 TKDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELA 1070

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +D+ LEK AV ++GDAWR V+D CLPV +LID+QRSIPYAIKQ++ LLGISCAFEQAVQR
Sbjct: 1071 LDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQR 1130

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LSTSV+MV +GVLK+HL+LL NSMTCAG LIGFN+GG K+LS+SL++QVPF  ATLFTPR
Sbjct: 1131 LSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPR 1190

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFERAAEKC+VD+LSSIV SC+WGKHV+VGTGS F+++W  K V       IDVYNFL 
Sbjct: 1191 KCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLH 1250

Query: 643  MVNSSTLEDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGIS-KE 470
            M++S++   + T+CLG E+          ++ LSP   +G +KP FED     N +  + 
Sbjct: 1251 MLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQP 1310

Query: 469  DDGGWS---SLGTKAEGWNSNSAWGKKVD-----------YDEPSDASGWESKKADESTP 332
             +  W    SL  K   WN +SAW KK +             + SD   W + K+     
Sbjct: 1311 AESSWEKGVSL-DKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDA 1369

Query: 331  STAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTW------ETKV------ADEST 188
            + A  S+ K++E  DW   K K+ +   +    ++QN W      ++K+         +T
Sbjct: 1370 AAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEWCDWRTSKSKIQVVAAAVTSTT 1429

Query: 187  HSKAWG----------------SSNKESESNNW----HSFQKIS--------NDSTPAQS 92
                WG                +   E+E  +W       Q +S        N+ T    
Sbjct: 1430 KQSEWGDWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSD 1489

Query: 91   WG-SKNDTWETKVADESTPSK------AWGSSNKES 5
            WG  KNDT +  + +++  S       +WG+  KES
Sbjct: 1490 WGLKKNDTQDVSMEEKTFKSNGADTGTSWGTMGKES 1525



 Score = 59.3 bits (142), Expect = 7e-06
 Identities = 50/186 (26%), Positives = 73/186 (39%), Gaps = 13/186 (6%)
 Frame = -3

Query: 535  DSGAEKPTFEDIIGDSNGISKEDDGGWSS-------LGTKAEGWNSN-----SAWGKKVD 392
            D G  K   +D+     G  + + G W         +  K +G   N     S WG K +
Sbjct: 1436 DWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKN 1495

Query: 391  YDEPSDASGWESK-KADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTW 215
              +  D S  E   K++ +   T+WG+  KESE  D       +ND+ P   WG+ Q+  
Sbjct: 1496 --DTQDVSMEEKTFKSNGADTGTSWGTMGKESEKPD-------ANDALPWSGWGT-QDVI 1545

Query: 214  ETKVADESTHSKAWGSSNKESESNNWHSFQKISNDSTPAQSWGSKNDTWETKVADESTPS 35
             TK  D+S+ S  W        S  W S  + SN    +  W + N    T    +S   
Sbjct: 1546 PTKTLDDSSKSSGWEQQKSPECSQGWGSLDE-SNQPASSNGWDTPNGLGST----QSEKQ 1600

Query: 34   KAWGSS 17
              WG S
Sbjct: 1601 HQWGQS 1606


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  685 bits (1768), Expect = 0.0
 Identities = 375/756 (49%), Positives = 483/756 (63%), Gaps = 64/756 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+QF+YG+N A    +F AG+PVGVL
Sbjct: 776  GLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVL 834

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW++MKEILLC V  KND  DR V+LYL  CDCGRK+C
Sbjct: 835  AATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYC 894

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQ-LVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            QE AA  VKNHL+++ LK+ A+E + EY+ Q  V E+  G    LVGHI LNK+ L + N
Sbjct: 895  QENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAG----LVGHILLNKAVLKELN 950

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I + +V  KCQ+TI   +KKKK  + FKR DL +SECCS  QS   KW ++ C+ FF + 
Sbjct: 951  ISMQEVHMKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRN 1010

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  L+     L D + PVLL+TVIKGDPR+ +AN+IW+SPDT TWIRSP K+ KGELA
Sbjct: 1011 TKDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELA 1070

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +D+ LEK AV ++GDAWR V+D CLPV +LID+QRSIPYAIKQ++ LLGISCAFEQAVQR
Sbjct: 1071 LDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQR 1130

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            LSTSV+MV +GVLK+HL+LL NSMTCAG LIGFN+GG K+LS+SL++QVPF  ATLFTPR
Sbjct: 1131 LSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPR 1190

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFERAAEKC+VD+LSSIV SC+WGKHV+VGTGS F+++W  K V       IDVYNFL 
Sbjct: 1191 KCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLH 1250

Query: 643  MVNSSTLEDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGIS-KE 470
            M++S++   + T+CLG E+          ++ LSP   +G +KP FED     N +  + 
Sbjct: 1251 MLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQP 1310

Query: 469  DDGGWS---SLGTKAEGWNSNSAWGKKVD-----------YDEPSDASGWESKKADESTP 332
             +  W    SL  K   WN +SAW KK +             + SD   W + K+     
Sbjct: 1311 AESSWEKGVSL-DKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDA 1369

Query: 331  STAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTW------ETKV------ADEST 188
            + A  S+ K++E  DW   K K+ +   +    ++QN W      ++K+         +T
Sbjct: 1370 AAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEWCDWRTSKSKIQVVAAAVTSTT 1429

Query: 187  HSKAWG----------------SSNKESESNNW----HSFQKIS--------NDSTPAQS 92
                WG                +   E+E  +W       Q +S        N+ T    
Sbjct: 1430 KQSEWGDWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSD 1489

Query: 91   WG-SKNDTWETKVADESTPSK------AWGSSNKES 5
            WG  KNDT +  + +++  S       +WG+  KES
Sbjct: 1490 WGLKKNDTQDVSMEEKTFKSNGADTGTSWGTMGKES 1525



 Score = 59.3 bits (142), Expect = 7e-06
 Identities = 50/186 (26%), Positives = 73/186 (39%), Gaps = 13/186 (6%)
 Frame = -3

Query: 535  DSGAEKPTFEDIIGDSNGISKEDDGGWSS-------LGTKAEGWNSN-----SAWGKKVD 392
            D G  K   +D+     G  + + G W         +  K +G   N     S WG K +
Sbjct: 1436 DWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKN 1495

Query: 391  YDEPSDASGWESK-KADESTPSTAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTW 215
              +  D S  E   K++ +   T+WG+  KESE  D       +ND+ P   WG+ Q+  
Sbjct: 1496 --DTQDVSMEEKTFKSNGADTGTSWGTMGKESEKPD-------ANDALPWSGWGT-QDVI 1545

Query: 214  ETKVADESTHSKAWGSSNKESESNNWHSFQKISNDSTPAQSWGSKNDTWETKVADESTPS 35
             TK  D+S+ S  W        S  W S  + SN    +  W + N    T    +S   
Sbjct: 1546 PTKTLDDSSKSSGWEQQKSPECSQGWGSLDE-SNQPASSNGWDTPNGLGST----QSEKQ 1600

Query: 34   KAWGSS 17
              WG S
Sbjct: 1601 HQWGQS 1606


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  667 bits (1721), Expect = 0.0
 Identities = 374/748 (50%), Positives = 478/748 (63%), Gaps = 62/748 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYGVN  +     F AG+PVGV
Sbjct: 777  GLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGV 836

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKEILLC V FKN+  DR V+LYLN C CGRK+
Sbjct: 837  LAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKY 896

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA  VKN LK++SLK+ A+EF+IEY +QL       N   LVGHIHLN+  L + N
Sbjct: 897  CRERAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLRELN 956

Query: 1543 IILSDVLEKCQDTIN------LNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCI 1382
            I + D+L+KCQ+TIN      + +KK  +G  FK   L  SE CSF  S   K ++ PC+
Sbjct: 957  IGVHDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPCL 1016

Query: 1381 QFFWQGASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKS 1202
             FF Q   D+         AD +CPVLL+T+IKGDPR+ +AN+IWI PDT TWIRSP KS
Sbjct: 1017 MFFLQATDDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKS 1076

Query: 1201 PKGELAVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAF 1022
             KGE A+DI LEK  + +SGDAWR V+DSCLPV HLID++RSIPYAIKQI+ LLG+SCAF
Sbjct: 1077 QKGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAF 1136

Query: 1021 EQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNA 842
            +QAVQRLST+VTMV KGVLK+HL+LL NSMTCAG  +GFN+ G K+LS++L++QVPF  A
Sbjct: 1137 DQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEA 1196

Query: 841  TLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEID 662
            TLFTPRKCFERAAEKC++D+L+SIV SC+WGKHV+VGTG  F+++W T+ V +  +  +D
Sbjct: 1197 TLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLD 1256

Query: 661  VYNFLRMVNSSTLEDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFEDII---- 497
            V+NFL MV+++ +E+A T  LGAE+          D   SP  +S  ++P FED++    
Sbjct: 1257 VFNFLHMVSTANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFDD 1316

Query: 496  --GD---------SNGISKEDDGG--WS---SLGTKA--EGWNSNSAWG--KKVDYDEPS 377
              GD          +    + +GG  WS   ++GT A  + W   S+WG  K    D  S
Sbjct: 1317 KLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVW---SSWGTEKGKTQDSNS 1373

Query: 376  DASGWESKKADESTPSTAWGSS-NKESESNDWNPIKKKSND-----------STPSQDWG 233
              +  +SKK+     S+AWG +  KE+ ++ W       ND           +T S    
Sbjct: 1374 AEAQLDSKKSSVLDTSSAWGKNPAKENTTSTWGTTTASENDWCGRGVGEDDSATLSGKKS 1433

Query: 232  SKQNT---WETKVADESTHSKAWGSS-NKESESNNWHSFQKISND--------------S 107
               NT   W T  A E   S AWG++  KE+ ++ W + +   ND              S
Sbjct: 1434 GVLNTSSAWATNTAREDAAS-AWGTNPAKENSTSTWGTTRANENDWCGREVGQDDSASLS 1492

Query: 106  TPAQSWGSKNDTWETKVADESTPSKAWG 23
                S    +  W T  A E   S AWG
Sbjct: 1493 VKKSSVLDTSSAWATNTAREDAAS-AWG 1519


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  654 bits (1688), Expect = 0.0
 Identities = 356/755 (47%), Positives = 474/755 (62%), Gaps = 64/755 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYG+   +     F AG+PVGV
Sbjct: 779  GLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPVGV 838

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKEILLC V F+N+  DR V+LYLN CDCG   
Sbjct: 839  LAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGSC 898

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA +VKN L+++SLK AA+EF+IEY+ Q   +        LVGHI+L++  L +  
Sbjct: 899  CRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEELK 958

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I +++V EKC + +    +KKKV    K I+LS+SE CS      S     PC+ F W  
Sbjct: 959  ISMANVFEKCLERLKSFSRKKKVNQYLKNIELSFSESCS------SSHPAAPCLTF-WLK 1011

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  L+ A  +L++ +CPVL +T+IKGDPR+S+A++IW+SPDT TW+R+P KS  GELA
Sbjct: 1012 NHDSDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSSNGELA 1071

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +DI LE+EAV +SGDAWR+V+DSCLPV HLID++RSIPYAIKQI+ LLGISC F+QA+QR
Sbjct: 1072 LDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQR 1131

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            ++ SV MV KGVL++HL+LL +SMTC G L+GFNTGG K+LS+ L++QVPF +ATLFTP+
Sbjct: 1132 VAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPK 1191

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFERAAEKC+ D+LSSIV SC+WGKHV+VGTGS F+I+W +  +     E +DVY+FL 
Sbjct: 1192 KCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYSFLH 1251

Query: 643  MVNSSTL-EDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGISKED 467
            MV S T  E+   +CLG +I         D  +SP  +SG E   FE+     NG     
Sbjct: 1252 MVKSVTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFE-AVFEENPEVLNG---ST 1307

Query: 466  DGGW--SSLGTKAE-----GWNSN-----------SAWGKKVDYDEPSDASGWESKKADE 341
              GW  SS  T+++     GW S+           ++WGK V+ ++ S ++ W +    +
Sbjct: 1308 SNGWDVSSNQTQSKTNEWSGWASSNKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTTAD 1367

Query: 340  STPSTA-----WGSSNKE-------------SESNDWNPIKKKSNDSTPSQDW------- 236
             T + +     WGS+  E             S+SN WN     +   T S++W       
Sbjct: 1368 QTKTKSNEWSDWGSNKSEIPAGGSKAVQEDSSKSNAWNTSTTSNQTKTKSKEWSAWGSNK 1427

Query: 235  --------------GSKQNTWETKVADESTHSK-----AWGSSNKESESNNWHSFQKISN 113
                           SK NTW T    + T +K     AWGS+  E  +    + Q+   
Sbjct: 1428 SEIPACGSKAVQEDSSKSNTWNTSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQE--- 1484

Query: 112  DSTPAQSWGSKNDTWETKVADESTPSKAWGSSNKE 8
            DS+ + +W       +TK   +S    AWGS+  E
Sbjct: 1485 DSSKSNAWNRSTTADQTKT--KSNEWSAWGSNKSE 1517


>ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum]
            gi|557112419|gb|ESQ52703.1| hypothetical protein
            EUTSA_v10016128mg [Eutrema salsugineum]
          Length = 1874

 Score =  653 bits (1684), Expect = 0.0
 Identities = 361/734 (49%), Positives = 475/734 (64%), Gaps = 41/734 (5%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEY-GVNTANIASEFCAGDPVGV 1904
            GL EPGTLFKNLMA+LRD+VI  DGTVRN CSNSIVQF Y G +       F AG+PVGV
Sbjct: 771  GLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSIVQFSYEGNSDRGHQGLFEAGEPVGV 830

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKE+LLC V F+N   DR V+LYLN C CG+K+
Sbjct: 831  LAATAMSNPAYKAVLDSTPSSNSSWELMKEVLLCKVNFQNSANDRRVILYLNECRCGKKY 890

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            CQE AA  V+N LK++SLKE A+EFL+EYR Q       GN   L GHIHLNK+ L + N
Sbjct: 891  CQENAAYTVRNKLKKVSLKETAVEFLVEYRKQQAISEIFGNDSSLRGHIHLNKTLLQEWN 950

Query: 1543 IILSDVLEKCQDTIN-LNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQ 1367
            I + D+L+KC+D IN L QKKKK  + FKR +LS+SECCSF     SK +++PC+ F   
Sbjct: 951  ISMQDILQKCEDAINSLVQKKKKKADDFKRTNLSFSECCSFRDPCASKDSDMPCLMFSSY 1010

Query: 1366 GASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGEL 1187
             A+D  LER  D+L  T+ PVLL+TVIKGDPR+ +AN+ W SP+T TWI +   S +GE 
Sbjct: 1011 NATDPDLERTLDVLCHTIYPVLLETVIKGDPRIFSANITWNSPETTTWIWNRHASRRGEW 1070

Query: 1186 AVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQ 1007
             +D+T+EK AV +SGDAWRVVMDSCL V HLID+ RSIPY+IKQ++ LLG+SCAFEQAVQ
Sbjct: 1071 VLDVTVEKSAVKQSGDAWRVVMDSCLSVLHLIDTTRSIPYSIKQVQELLGLSCAFEQAVQ 1130

Query: 1006 RLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTP 827
            RLS SV MV+KGVLK+H++L+ N+MTC+G ++GFN+GG K+L++SL+++ PF  ATL TP
Sbjct: 1131 RLSASVRMVSKGVLKEHIILVANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITP 1190

Query: 826  RKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFL 647
            RKCFE+AAEKC+ D+LS++VGSC+WGK V VGTGS FE++W  K   +  + E DVY+FL
Sbjct: 1191 RKCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSKFELLWNKKETGLENENETDVYSFL 1250

Query: 646  RMVNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSN--GISK 473
            +MV S+T  DA  S  G ++         ++  SP RDS   +  FED     N     K
Sbjct: 1251 QMVRSTTNADAYASSPGFDV---TEEDMAEWAESPERDSALGELKFEDSAEFQNIHDEGK 1307

Query: 472  EDDGGWSSLGTKAEGW----------NSNSAWGKKVDYDEPSDASGWESKK-ADESTPS- 329
              +  W +  +    W          N  S W K  + ++   +SGW SKK A ES+ S 
Sbjct: 1308 PSESKWDNGFSGGSEWDLSRNTGGEENPQSGWEKTTNVEKEDASSGWNSKKDAQESSRSD 1367

Query: 328  --TAWGSSNKESESN-----DWNPIKKKS---NDSTPSQD-WGSK---QNTWETKVADES 191
               AWGS  K++++N     +  P +K S    ++ PS D WG K   +  W+ K +   
Sbjct: 1368 SWRAWGSKPKDNDANTTPSWETRPAQKDSMVIENNEPSVDVWGPKSVSEKVWKKKNSKTE 1427

Query: 190  THSKAWGSSNK-----ESESNNWHSFQKISNDS-TPAQSWGSKNDTWETKVADESTPSKA 29
            +   AW S +K     E +++ W    K++ ++ T A +WG+          ++ T S A
Sbjct: 1428 SAPAAWVSRDKKNSETELDASAWGFGDKVNKETETDAAAWGAGYK------MNKETESAA 1481

Query: 28   WGS-----SNKESG 2
            WGS     S  ESG
Sbjct: 1482 WGSWGEKRSETESG 1495


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  649 bits (1674), Expect = 0.0
 Identities = 356/725 (49%), Positives = 472/725 (65%), Gaps = 32/725 (4%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVL 1901
            GLTEPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYG  +A   + + AG+PVGVL
Sbjct: 778  GLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGRGSAR--NLYPAGEPVGVL 835

Query: 1900 AATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKHC 1721
            AATAMSNPAYKAVLD       SW++MKEILLC   F+N+  DR V+LYLN C CGRK+C
Sbjct: 836  AATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKAIFRNELIDRRVILYLNHCGCGRKYC 895

Query: 1720 QETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNI 1541
            +E A   V+N LK++SLK+ A+EF+IEY++Q      D N+GL VGHIHLN+  L + +I
Sbjct: 896  REQATYLVQNQLKKVSLKDTAVEFMIEYKNQSSFSAVDMNAGL-VGHIHLNEVLLKEMDI 954

Query: 1540 ILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQGA 1361
             ++++L+KC++ IN + +KKK+G   K+  LS SECC+F +S     +  PC+    +  
Sbjct: 955  GMNEILQKCEEAIN-SVRKKKLGKHLKKAVLSVSECCTFHKSGLDGTSEFPCLLISIREN 1013

Query: 1360 SDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELAV 1181
             +  LE +S ILAD++CP LL+T+IKGD R+S+A + W+S DT T IRSP  S  GELAV
Sbjct: 1014 MNDTLEESSKILADSICPFLLETIIKGDSRISSAKITWLSSDT-TSIRSPQNSDMGELAV 1072

Query: 1180 DITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQRL 1001
            D+ L+K A+ +SGDAWR+V+DSCLPV HLID++RSIPY IKQI+ LLGISCAF+QAVQRL
Sbjct: 1073 DVVLDKSAIKRSGDAWRIVIDSCLPVLHLIDTRRSIPYGIKQIQELLGISCAFDQAVQRL 1132

Query: 1000 STSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPRK 821
            STSV+MV+KGVLK+HL+LL NSMT AG LIGFN+GG K+L++SL+VQVPF  ATL TP++
Sbjct: 1133 STSVSMVSKGVLKEHLILLANSMTYAGNLIGFNSGGYKALTRSLNVQVPFTEATLITPKR 1192

Query: 820  CFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLRM 641
            CFERAAEKC+VD+L+SIV SC+WGKHV+VGTGS F+I+W T+ V       +DV NFL M
Sbjct: 1193 CFERAAEKCHVDSLTSIVASCSWGKHVAVGTGSRFDILWDTRKVEFNQAGGVDVNNFLHM 1252

Query: 640  VNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSNGISKEDDG 461
            V+++  E+A T+CLG EI                 +  +++P FED I +   IS++D  
Sbjct: 1253 VSTAYGEEASTACLGEEIDDLMPGDDIAELCLSPENFNSDRPVFED-IDEFQDISEKDLP 1311

Query: 460  G---WSSLGTKAEGWNSNSAWGKKVDYDEPSD-ASGWESKKADE-------STPSTAW-- 320
            G   W +L +   G +S   WG   +     D  S W +   +E         P  +W  
Sbjct: 1312 GKSSWDNLSSFRSGSSSGKEWGSNNNVGTKYDVGSSWGTANKEEQEVIPSKGEPDNSWSN 1371

Query: 319  GSSNK-------ESESNDW--------NPIKKKSNDSTPSQDWGSKQNTWETKVADESTH 185
            G  NK       E+  +DW        NP   K  +S+   D       W T  A E   
Sbjct: 1372 GWENKNSGRMELETMKSDWRGDADERHNPFSSKPQESSKRSDVWDATPGWGTNTASEKVS 1431

Query: 184  SKAWGSSNKESESNNWHSFQKISNDSTPAQSWGSKNDT----WETKVADESTPSKAWGSS 17
            S    +S   S    W    K  +D++ A+ W S+N +    W +K   +++ +K W S 
Sbjct: 1432 SSTGWNSENISSGAGW---SKADSDNSHAKGWNSENISSGAGW-SKAGSDNSHAKGWKSE 1487

Query: 16   NKESG 2
            N  SG
Sbjct: 1488 NISSG 1492



 Score = 63.2 bits (152), Expect = 5e-07
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
 Frame = -3

Query: 460  GWS---SLGTKAEGWNSNSAWGKKVDYDEPSDASGWESKKADESTPSTAWGSSN------ 308
            GWS   S  + A+GWNS +           S  +GW    +D S+ +  W S N      
Sbjct: 1494 GWSKADSDNSHAKGWNSENI----------SSGAGWSKAGSDNSSHAKGWNSENISSGAG 1543

Query: 307  ------KESESNDWNP--------IKKKSNDSTPSQDWGSKQNT----WETKVADESTHS 182
                    S +  WN           K  +D++ ++ W S+  +    W    +D S+H+
Sbjct: 1544 WSKADSDNSHAKGWNSENISSGAGWSKAGSDNSHAKGWNSENISSGAGWSKAGSDNSSHA 1603

Query: 181  KAWGSSNKESESNNWHSFQKISNDSTPAQSWGSKNDT----WETKVADESTPSKAWGSSN 14
            K W S N  S +     + K  +D++ A+ W S+N +    W +K   +++ +K W S N
Sbjct: 1604 KGWNSENISSGA----GWSKEDSDNSHAKGWNSENISSGAGW-SKAGSDNSHAKGWNSEN 1658

Query: 13   KESG 2
              SG
Sbjct: 1659 ISSG 1662


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  643 bits (1659), Expect = 0.0
 Identities = 360/757 (47%), Positives = 474/757 (62%), Gaps = 64/757 (8%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIA--SEFCAGDPVG 1907
            GLTEPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+Q EYG+    +   S F  G+PVG
Sbjct: 775  GLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVG 834

Query: 1906 VLAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRK 1727
            VLAATAMS PAYKAVLD       SWDMMKEILLC V FKN+  DR V+LYLN C CGRK
Sbjct: 835  VLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRK 894

Query: 1726 HCQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQS 1547
            +C E AA  VK+HLK+++LK+AA++F+IEY  Q       G    LVGH+HLN+  L + 
Sbjct: 895  YCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQ---PTPSGLGPGLVGHVHLNRMLLKEL 951

Query: 1546 NIILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQ 1367
            NI +++VL +CQ+T++  +KKKK   +   +  S SE C+F Q +  +  ++PC+  FW 
Sbjct: 952  NIDMTEVLRRCQETMSSFKKKKK--KIAHALRFSISEHCAFHQWNGEESIDMPCL-IFWH 1008

Query: 1366 GASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGEL 1187
               DV LER + ILAD V P+L +T+IKGDPR+ +A++IWISPD+ +W ++P +   GEL
Sbjct: 1009 QTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGEL 1068

Query: 1186 AVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQ 1007
            A+D+ LEK AV ++GDAWR V+D CLPV HLID++RS+PYAIKQ++ LLGISCAF+Q +Q
Sbjct: 1069 ALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQ 1128

Query: 1006 RLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTP 827
            RLS SV+MV+KGVL DHL+LL NSMTC G +IGFN+GG K+LS++L++QVPF  ATLFTP
Sbjct: 1129 RLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTP 1188

Query: 826  RKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFL 647
            RKCFE+AAEKC+ D+LSSIV SC+WGKHV+VGTGS F+I+W  K +    D+ +DVYNFL
Sbjct: 1189 RKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFL 1248

Query: 646  RMVNSSTLEDAGTSCLGAEI-XXXXXXXXXDFELSPVRDSGAEKPTFED------IIGDS 488
             MV S   E+  ++CLG EI          +  LSP   S +EKP FED       + + 
Sbjct: 1249 HMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNY 1308

Query: 487  NGISKEDDGGWSSLGTKAEG---WNSNSAWGKKVDYDEPSDASGWESK--------KADE 341
             G SK +     SLG  + G   W SN   GK  +  + +D SGW  K         A E
Sbjct: 1309 PGESKWEKA--PSLGAVSTGGGQWESNEN-GKATNSSDGNDWSGWGRKAEPDVTVTNAQE 1365

Query: 340  STPSTAWGSSN-------KESESNDWNPIKKK--------SNDSTPSQDWGSKQNTWETK 206
            +T ++AW +++         S  NDW+    K        S + TP        +TW TK
Sbjct: 1366 NTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKEVERDSFTSMEKTPKSGGWDSASTWGTK 1425

Query: 205  VADES-------THSKAWGSSNKE---------------SESNNWHSFQKISNDSTPAQS 92
              D+S         S  W    K+               S+S  W         S    +
Sbjct: 1426 TKDDSFKRETAPKKSSQWSGLQKDKAETQDAFHKKAEMASKSGGWEDKAWSRGTSKTEDN 1485

Query: 91   WGS----KNDTWETKVADESTPSKAWGSS---NKESG 2
            W S    K ++++ +V + S+ +  WGS+    K SG
Sbjct: 1486 WSSQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSG 1522


>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
            gi|482562261|gb|EOA26451.1| hypothetical protein
            CARUB_v10022497mg [Capsella rubella]
          Length = 1959

 Score =  643 bits (1658), Expect = 0.0
 Identities = 358/740 (48%), Positives = 469/740 (63%), Gaps = 50/740 (6%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTAN-IASEFCAGDPVGV 1904
            GL EPGTLFKNLMA+LRD+VI  DGTVRN CSNS+VQF+YGV++       F AG+PVGV
Sbjct: 771  GLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSVVQFKYGVDSERGHQGLFEAGEPVGV 830

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKE+LLC V F+N+T DR V+LYLN C CG++ 
Sbjct: 831  LAATAMSNPAYKAVLDSTANSNSSWELMKEVLLCKVNFQNNTNDRRVILYLNECRCGKRF 890

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            CQE AA  V+N L ++SLK  A+EFL+EYR Q       G    L GHIHLNK+ L   N
Sbjct: 891  CQENAACTVRNKLNKVSLKATAVEFLVEYRKQQTISEIFGIDSCLHGHIHLNKTLLQDWN 950

Query: 1543 IILSDVLEKCQDTINL--NQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFW 1370
            I + D+ +KC+D IN    +KKKK  + FKR  LS S+CCSF     SK +++PC+ F +
Sbjct: 951  ISMQDIHQKCEDVINSLGQKKKKKATDDFKRTSLSVSDCCSFRDPCGSKDSDMPCLMFSY 1010

Query: 1369 QGASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGE 1190
              A++  LER  D+L +T+ PVLL+TVIKGDPR+ +AN+IW S D  TWIR+   S +GE
Sbjct: 1011 N-ATNPDLERTLDVLCNTIYPVLLETVIKGDPRICSANIIWNSSDMTTWIRNRHASRRGE 1069

Query: 1189 LAVDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAV 1010
              +D+T+EK AV +SGDAWRVV+DSCL V HLID++RSIPY+IKQ++ LLG+SCAFEQAV
Sbjct: 1070 WVLDVTVEKSAVKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAV 1129

Query: 1009 QRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFT 830
            QRLS SV MV+KGVLK+H++LL N+MTC+G ++GFN+GG K+L++SL+++ PF  ATL T
Sbjct: 1130 QRLSASVKMVSKGVLKEHIILLANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLIT 1189

Query: 829  PRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNF 650
            PRKCFE+AAEKC+ D+LS++VGSC+WGK V VGTGS FE++W  K   +   EE DVY+F
Sbjct: 1190 PRKCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSF 1249

Query: 649  LRMVNSSTLEDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFEDIIGDSN--GIS 476
            L+MV S+T  DA  S  G ++         ++  SP RDS   +P FED     N     
Sbjct: 1250 LQMVRSTTSSDAFVSSPGFDV---TEEEMAEWAESPERDSALGEPKFEDSAEFQNLHDDG 1306

Query: 475  KEDDGGWSSLGTKAEGWNSNSAWG---------------KKVDYDEPSDA-SGWESKK-A 347
            K+ +  W    +   G +  S WG               +K    E  DA SGW +KK A
Sbjct: 1307 KQSESNWEKSSSWDNGCSGGSEWGVSKSTGGESNTESNWEKTTSVEKEDAWSGWNTKKDA 1366

Query: 346  DESTPST---AWGSSNKESESN---DWNPIKKKSNDSTP------SQDWGSK-------- 227
             ES+ S    AWG   K+ ++N   +W     + +   P      S  WG K        
Sbjct: 1367 QESSKSDSGGAWGIKTKDDDANTTPNWETRPAQMDSIVPEINEPTSDVWGLKSVSEKPWN 1426

Query: 226  QNTWETKVADE---STHSKAWGSSNK-----ESESNNWHSFQKISNDSTPAQSWGSKNDT 71
            +  W T+ A     ST + AWGSSNK     ES++  W S  K ++D     S       
Sbjct: 1427 KKNWGTESAPAAWGSTDADAWGSSNKKNSETESDAAAWGSRDKRNSD---IGSGAGVLGP 1483

Query: 70   WETKVADESTPSKAWGSSNK 11
            W  K ++  + + AWGSS K
Sbjct: 1484 WNKKSSETESDAAAWGSSGK 1503


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  641 bits (1654), Expect = 0.0
 Identities = 350/740 (47%), Positives = 473/740 (63%), Gaps = 49/740 (6%)
 Frame = -3

Query: 2080 GLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGV 1904
            GL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+QFEYG+   + +   F AG+PVGV
Sbjct: 779  GLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPVGV 838

Query: 1903 LAATAMSNPAYKAVLDXXXXXXXSWDMMKEILLCGVGFKNDTADRWVLLYLNGCDCGRKH 1724
            LAATAMSNPAYKAVLD       SW++MKEILLC V F+N+  DR V+LYLN CDCG  +
Sbjct: 839  LAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGGSY 898

Query: 1723 CQETAALAVKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSN 1544
            C+E AA +VK+ L+++SLK+AA+EF+IEY+ Q   +        LVGHI+L++  L +  
Sbjct: 899  CRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEELK 958

Query: 1543 IILSDVLEKCQDTINLNQKKKKVGNLFKRIDLSYSECCSFCQSSKSKWTNVPCIQFFWQG 1364
            I ++ V +KC + +    +KKKV    K I+LS+SE CS      S     PC+ F W  
Sbjct: 959  ISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESCS------SSHPAAPCLTF-WLK 1011

Query: 1363 ASDVLLERASDILADTVCPVLLQTVIKGDPRVSTANLIWISPDTATWIRSPCKSPKGELA 1184
              D  L+ A  +LA+ +CPVL +T+I+GDPR+S+A++IW+SPDT TW+R+P KS  GELA
Sbjct: 1012 NYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNGELA 1071

Query: 1183 VDITLEKEAVTKSGDAWRVVMDSCLPVFHLIDSQRSIPYAIKQIEHLLGISCAFEQAVQR 1004
            +DI LEKEAV +SGDAWRVV+D+CLPV HLID++RSIPYAIKQI+ LLGISC F+QA+QR
Sbjct: 1072 LDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQR 1131

Query: 1003 LSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNTGGIKSLSKSLDVQVPFMNATLFTPR 824
            ++ SV MV KGVL++HL+LL +SMTC G L+GFN GG K+LS+ L++QVPF +ATLFTP+
Sbjct: 1132 VAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPK 1191

Query: 823  KCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIIWGTKSVNMMVDEEIDVYNFLR 644
            KCFERAAEKC+ D+LSSIV SC+WGKHV+VGTGS F+++W    +     E +DVY+FL 
Sbjct: 1192 KCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLH 1251

Query: 643  MVNSSTL-EDAGTSCLGAEIXXXXXXXXXDFELSPVRDSGAEKPTFED------------ 503
            MV S T  E+   +CLG +I         D  +SP  +SG E   FE+            
Sbjct: 1252 MVKSFTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFE-AVFEENPEVLNGSTSNG 1310

Query: 502  -IIGDSNGISKEDD-GGWSSLGTKAEGWNSNS------AWGKKVDYDEPSDASGWESKKA 347
              +  + G SK ++  GW+S   KAE  +  S      +WGK V+ ++ S ++ W +   
Sbjct: 1311 WDVSSNQGESKTNEWSGWAS-SNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTSTI 1369

Query: 346  DESTPS-----TAWGSSNKES----ESNDWNPIKKKSNDSTPSQDWG--------SKQNT 218
             + T +     +AWGS+  E      S++   IK   +++     WG        SK N 
Sbjct: 1370 ADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKSNA 1429

Query: 217  WETKVADESTHSK-----AWGSSNKESESNNWHSFQKISNDSTP-----AQSWGSKNDTW 68
            W T    +  ++K     AWGS+  E  +    + Q+ S  S+      AQ   S+   W
Sbjct: 1430 WNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAW 1489

Query: 67   ETKVADESTPSKAWGSSNKE 8
            +   AD+ T S  W    K+
Sbjct: 1490 DANAADQ-TKSSEWSGWGKK 1508



 Score = 59.3 bits (142), Expect = 7e-06
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
 Frame = -3

Query: 496  GDSNGISKEDD---GGWSSLGTKAEGWNSNSAWGKKVDY--DEPSDASGWESKKADESTP 332
            G    +++ED+   G W +        N  S WGKK D   ++ S    W++  AD++  
Sbjct: 1638 GKKKEVTQEDNSRFGAWDANAEDQTKSNEWSGWGKKKDVTQEDNSRLGAWDANAADQT-- 1695

Query: 331  STAWGSSNKESESNDWNPIKKKSNDSTPSQDWGSKQNTWETKVADESTHSKAWGSSNKE- 155
                    K +E +DW   K+ + +      WGS +   +    ++++ S  WG++  + 
Sbjct: 1696 --------KSNEWSDWGKKKEVTQEDNVQDSWGSGKRK-DKVTQEDNSGSGGWGANRTDL 1746

Query: 154  --SESNNWHSFQKISNDSTPAQSWGSKNDTWETKVADESTPSKAWGSS 17
              S+S+ W S+ K  ++     S   +ND+W +   ++ T  +  GS+
Sbjct: 1747 AKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSA 1794