BLASTX nr result

ID: Mentha27_contig00025641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00025641
         (292 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus...    98   1e-18
ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-lik...    67   3e-09
ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-lik...    63   5e-08

>gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus guttatus]
          Length = 430

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 56/83 (67%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSN-PTPSLSVVS 72
           MENLGLVSSPKIVLGVSPNPRNS I  SSK  VGLPNLL++TG  GR +   T SL V+S
Sbjct: 1   MENLGLVSSPKIVLGVSPNPRNSVI--SSKPLVGLPNLLKKTGNYGRHTTIHTSSLQVLS 58

Query: 71  LFGARKATKTIVEEKVTEDGFAS 3
           LF + K TKTIV EK  +D FA+
Sbjct: 59  LFRSPKPTKTIVSEKAAKDRFAT 81


>ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum
           lycopersicum]
          Length = 443

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/82 (48%), Positives = 49/82 (59%)
 Frame = -3

Query: 248 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSNPTPSLSVVSL 69
           MEN+G+VSSPK+VLG+S N       +SSK F GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENIGIVSSPKMVLGLSSNS-----VISSKPFFGLPHLPKRPFKNGRTVRPTTCFEVVSC 55

Query: 68  FGARKATKTIVEEKVTEDGFAS 3
           F   + TK IV  K     FAS
Sbjct: 56  FQGPRLTKKIVLGKSGRGSFAS 77


>ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum tuberosum]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -3

Query: 248 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSNPTPSLSVVSL 69
           MEN+ +VSSPK+VLG+S NP      +S+K   GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENICIVSSPKMVLGLSSNP-----VISNKPLFGLPHLPKRPFKNGRIVRPTTCFEVVSC 55

Query: 68  FGARKATKTIVEEKVTEDGFAS 3
           F + + TK IV  K     FAS
Sbjct: 56  FQSPRLTKKIVLGKSGRGSFAS 77


Top