BLASTX nr result

ID: Mentha27_contig00023128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00023128
         (655 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65118.1| hypothetical protein 31.t00031 [Brassica oleracea]      58   3e-06
gb|AAM15454.1| putative replication protein A1 [Arabidopsis thal...    56   9e-06

>gb|ABD65118.1| hypothetical protein 31.t00031 [Brassica oleracea]
          Length = 467

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
 Frame = +3

Query: 30  KSEDWLNAASAKTIGELINSKEIGTYICKGKIYDFHSDASWYYEACGKMNCFKKIA---K 200
           + ED+      KTI E++ S++    I    I    SD  W+Y +C    C KK+     
Sbjct: 210 EKEDFFIHTPRKTISEVLESRQTERCIVMCTIAAIESDMGWFYLSCKV--CSKKVQTVPN 267

Query: 201 EQKDGGN---CTGCKVPIESTTIRYLLKVLVKDDKDQACFTIFEDCALYFLKKSAIQLMK 371
           +  DGG    CT CKV       RY L ++V D+     F +F++  L  L +  I+L  
Sbjct: 268 DNDDGGFKYFCTKCKVYTPKMLPRYKLHLVVLDNTSNTKFLLFDNLGLQLLNQPCIELTG 327

Query: 372 ETEEEVIN 395
           +  +EV N
Sbjct: 328 KVTDEVQN 335


>gb|AAM15454.1| putative replication protein A1 [Arabidopsis thaliana]
          Length = 521

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
 Frame = +3

Query: 6   VSRGIHNLKSEDWLNAASAKTIGELINSKEIGTYICKGKIYDFHSDASWYYEACGKMN-- 179
           V+R I   KS D+ +   AKTI +L+N +++G +   G I+   +D  W+Y  C K N  
Sbjct: 205 VNRDIIKTKSVDFFDYP-AKTIVDLLNGRDVGQWRILGSIFAIDTDWGWFYFGCPKCNRK 263

Query: 180 ---------CFKKIAKEQKDGGNCTGCKVPIESTTIRYLLKVLVKDDKDQACFTIFEDCA 332
                      K+I    K    C   +  I +   RY L + V D   +    +FE+ A
Sbjct: 264 IELVKESTSTVKRIQAPTKPKFWCDKYQESITNVEARYKLHIRVMDQTGEIKLMVFENNA 323

Query: 333 LYFLKKSAIQLMKETEEEV 389
              ++KS+ +L+    EE+
Sbjct: 324 TNLIRKSSEELLDGQYEEI 342


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