BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00022751
         (1881 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   539   e-150
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   531   e-148
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   530   e-147
emb|CCH50966.1| T4.5 [Malus x robusta]                                528   e-147
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   518   e-144
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   514   e-143
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   514   e-143
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   513   e-142
gb|AAB82754.1| retrofit [Oryza longistaminata]                        512   e-142
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   512   e-142
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  509   e-141
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   508   e-141
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   507   e-141
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   504   e-140
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   503   e-140
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   503   e-139
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   503   e-139
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   501   e-139
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   501   e-139
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   500   e-139

>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  539 bits (1388), Expect = e-150
 Identities = 272/530 (51%), Positives = 359/530 (67%), Gaps = 1/530 (0%)
 Frame = -2

Query: 1775 HHMVTRSKRGIFKPKHFIAHTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTWDLV 1596
            H M+TRSK GIFKPK F+A    +P  P S  AAL   +W +AM+ EFQAL +N TWDLV
Sbjct: 297  HPMITRSKAGIFKPKSFLAALLAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNHTWDLV 356

Query: 1595 PYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTIRL 1416
              S  +KV+ NKWI+K+K HADG++ R KARLVA+GF Q  GVD+ ETFSPVVKA+T+R+
Sbjct: 357  LPSEPIKVVGNKWIFKIKYHADGTISRYKARLVAKGFHQTQGVDYTETFSPVVKASTVRV 416

Query: 1415 MFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQA 1236
            + +LA    W ++Q+D+NNAFLNGIL + +YM QP GF D + P  VCKLKK+LYGLKQA
Sbjct: 417  ILSLAVMNKWELRQVDVNNAFLNGILVEDVYMGQPEGFIDPSRPLHVCKLKKALYGLKQA 476

Query: 1235 PRAWYDTLKGSLLDA-GFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRII 1059
            PRAW++ LK +++   GF+   SD+SLF++                 ITG     V ++I
Sbjct: 477  PRAWFERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVIFVLVYVDDIIITGSSDKMVQQVI 536

Query: 1058 DMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAVN 879
              ++  F LK LG ++YFLGIEV     G  L Q KY++D+L K  M +C P  TPMA  
Sbjct: 537  TNMQNAFALKDLGKLSYFLGIEVTKTASGIYLSQSKYIADILAKHNMADCSPVPTPMATG 596

Query: 878  TKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKRLL 699
              L+  SG   +N   Y+S +GALQY+TLTRP+IAF VNKLSQFL SP  +HW +CKRLL
Sbjct: 597  HYLTKGSGSVISNSSQYKSAVGALQYVTLTRPEIAFSVNKLSQFLASPTAEHWESCKRLL 656

Query: 698  RYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQDV 519
            RYLKGT   GL F    +  +  ++D+DWA   D+R+S  G+ ++ GSNLV W SKKQ V
Sbjct: 657  RYLKGTIHFGLHFYHYGTMQINCFSDSDWACDKDDRKSVAGYAVYLGSNLVSWSSKKQAV 716

Query: 518  VSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHART 339
            VSRSS E+EYR++A AT ++ W+ SL  EL I + T   +WCDN SA+ALA NPV+HA+T
Sbjct: 717  VSRSSTEAEYRALAQATAEVTWIQSLLKELHIHLVTAPIMWCDNQSAIALAHNPVYHAKT 776

Query: 338  KHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            KH+E+D+HFIR+KV +K + V  +   +Q AD+LTK L  ++F  L  KL
Sbjct: 777  KHVELDIHFIRDKVTAKQITVQFIPSEDQNADVLTKALTFNQFHYLRSKL 826


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  531 bits (1368), Expect = e-148
 Identities = 276/542 (50%), Positives = 356/542 (65%), Gaps = 7/542 (1%)
 Frame = -2

Query: 1787 VQNNHHMVTRSKRGIFKPKHFIAHTTCLP-------EVPASTKAALQSTEWKEAMRIEFQ 1629
            V + H M TRSK G  KPK    H T L        ++P +   AL++  W   M  E+Q
Sbjct: 454  VPSLHPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQ 513

Query: 1628 ALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETF 1449
            ALV N TW LVP+   M VI +KWI++VK ++DG+++R KARLVA+GF+Q+AGV+F +TF
Sbjct: 514  ALVRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTF 573

Query: 1448 SPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCK 1269
            SPV+KA+TIR++F LA T  W ++Q+D NNAFLNG + +T+Y++QP+GF   ++P  VCK
Sbjct: 574  SPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCK 633

Query: 1268 LKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITG 1089
            L+K+LYGLKQAPR W+  L+ +L   GF    SD SLF  K +              ITG
Sbjct: 634  LQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITG 693

Query: 1088 DDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENC 909
            ++   V  +I  L+ +F LK LG V  FLG E      G  L Q KY +DLL KT M + 
Sbjct: 694  NNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSA 753

Query: 908  HPCSTPMAVNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRV 729
             P  TPM+   KL   SG  F++P LYRSTIGALQYLT TRPDIAF VNKLSQ+L  P  
Sbjct: 754  KPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTE 813

Query: 728  DHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNL 549
             HW ACKR+LRYLKG    GL FT +SS  L+ Y DADWA   D+RRST G+C+F G+NL
Sbjct: 814  LHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNL 873

Query: 548  VLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVAL 369
              W S+KQ VV+RSS ++EYR++A A+ ++ WL SL +ELGIS+     +WCDN  A AL
Sbjct: 874  FTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGAL 933

Query: 368  ASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            A+NPVFH+RTKHIEVDV ++RE+V  K + V +V   EQ AD+ TKPL   RF  L  KL
Sbjct: 934  AANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVPSVEQXADLFTKPLSIPRFQYLLTKL 993

Query: 188  CL 183
             L
Sbjct: 994  NL 995


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  530 bits (1364), Expect = e-147
 Identities = 266/531 (50%), Positives = 351/531 (66%)
 Frame = -2

Query: 1781 NNHHMVTRSKRGIFKPKHFIAHTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTWD 1602
            N H M+TR+K GI KPK FIA        P+S  AALQ  EWK+AM  E+ AL  N TW 
Sbjct: 912  NTHPMITRAKSGIVKPKIFIAAI----REPSSVSAALQQDEWKKAMVAEYDALQRNNTWS 967

Query: 1601 LVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTI 1422
            LVP  A  + I  KW+YK K + DG++++ KARLVA+GF Q AG DF ETFSPVVK +T+
Sbjct: 968  LVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTV 1027

Query: 1421 RLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLK 1242
            R++F +A ++ W ++QLD+NNAFLNG L++ ++M QP GF D   P+ VC+L K+LYGLK
Sbjct: 1028 RVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLK 1087

Query: 1241 QAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRI 1062
            QAPRAW++ L  +LL  GF    SD SLF + +               + G D+ A+  +
Sbjct: 1088 QAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSL 1147

Query: 1061 IDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAV 882
            I  L  +F LK LG V+YFLGI+V    +G  L Q KY+ DLL KT M +C P  TP+  
Sbjct: 1148 IAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPT 1207

Query: 881  NTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKRL 702
              KL    GD   +   YRST+GALQY+T+TRP+++F VNK+ QF+ +P  +HW   KR+
Sbjct: 1208 GLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRI 1267

Query: 701  LRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQD 522
            LRYL+GT   GL    SS+  L  + DADWA   D+RRST GHC+F G NL+ WQSKKQ 
Sbjct: 1268 LRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQH 1327

Query: 521  VVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHAR 342
            +VSRSS E EYRS+A    ++ WL SL +EL + ++ P  +WCDN S V L++NPV HAR
Sbjct: 1328 IVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHAR 1387

Query: 341  TKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            TKHIE+D++F+REKV  K VEV HV  A+QLAD+LTK + + +F+E   KL
Sbjct: 1388 TKHIELDLYFVREKVIRKEVEVRHVPSADQLADVLTKTVSSTQFIEFRHKL 1438


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  528 bits (1359), Expect = e-147
 Identities = 272/545 (49%), Positives = 350/545 (64%), Gaps = 10/545 (1%)
 Frame = -2

Query: 1781 NNHHMVTRSKRGIFKPKHFIA----------HTTCLPEVPASTKAALQSTEWKEAMRIEF 1632
            N H M+TR+K GI KPK F A            T LP  P++   A +S+ W EAM+ EF
Sbjct: 1110 NTHTMITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEF 1169

Query: 1631 QALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLET 1452
            QAL    TW+LVP  +   ++  KW++KVK   DG++ER KARLVA+GF Q  G+DF ET
Sbjct: 1170 QALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSET 1229

Query: 1451 FSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVC 1272
            FSPV K TTIR++ ++A +  W + QLD++NAFL+G L++ +YM QP GF D + P  VC
Sbjct: 1230 FSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVC 1289

Query: 1271 KLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXIT 1092
            KL+KSLYGLKQAPRAWY+    ++L  GF    SD SLF  K D              IT
Sbjct: 1290 KLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFI-KRDTSITFILVYVDDIIIT 1348

Query: 1091 GDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMEN 912
            G   T    II  L+  F +K LG +NYFLGIEV   + G LL Q KY  DLL KT M  
Sbjct: 1349 GSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLG 1408

Query: 911  CHPCSTPMAVNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPR 732
              PC+TP  V+T   ++SG   ++P  YRST+GALQYLT TRPD+AF VN++ Q++HSP+
Sbjct: 1409 AKPCATP--VSTSKLDHSGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSPQ 1466

Query: 731  VDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSN 552
              H  A KR+LRYLKGT   GL FT   S CL A++DADWAGC  +RRST G+C+F GSN
Sbjct: 1467 TIHLQAVKRILRYLKGTVDLGLWFT-KGSQCLTAWSDADWAGCPVDRRSTSGYCVFLGSN 1525

Query: 551  LVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVA 372
            L+ W +KKQ  V+RSS E+EYRS+A    ++ W+  +  ++   +     ++CDN S +A
Sbjct: 1526 LISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIA 1585

Query: 371  LASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKK 192
            LA NPVFHARTKH+E+D H+IREKV    + V HVA   Q+ADI TKPL  DRF  L  K
Sbjct: 1586 LAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSK 1645

Query: 191  LCLRS 177
            L +RS
Sbjct: 1646 LSVRS 1650


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  518 bits (1334), Expect = e-144
 Identities = 269/532 (50%), Positives = 352/532 (66%), Gaps = 1/532 (0%)
 Frame = -2

Query: 1781 NNHHMVTRSKRGIFKPK-HFIAHTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTW 1605
            N H MVTR+K GI K K +F +H +     P +   A++ + W  AM  EF AL  N TW
Sbjct: 686  NQHPMVTRAKNGISKKKVYFSSHIS----EPTTFTQAVKDSNWVLAMEKEFSALQRNNTW 741

Query: 1604 DLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATT 1425
             LVP  ++  +I  KW+YK+K   DG+++R KARLVA+GF Q  G+++ ETFSPVVKA+T
Sbjct: 742  HLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVKAST 801

Query: 1424 IRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGL 1245
            IR++ A+A +  W+V QLD+ NAFL+G LE+ ++M QP GF ++ YP  VCKL K+LYGL
Sbjct: 802  IRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGL 861

Query: 1244 KQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLR 1065
            KQAPRAWY+ L  SLL  GF+   +D S+F   S               +TG  S  V  
Sbjct: 862  KQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSS 921

Query: 1064 IIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMA 885
             I  L   F L+ LG VNYFLGIEV      F L Q KY  DLL +T M +  P +TP  
Sbjct: 922  FITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGL 981

Query: 884  VNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
            +   LS+  G+ F++  LYRST+GALQYLTLTRPDI+F VNK  QF+ +P   HW+A KR
Sbjct: 982  LGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKR 1041

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRYLKGT + G+Q   S+S  +  Y DADWA C D+RRSTGG+ IF G NLV W S KQ
Sbjct: 1042 ILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQ 1101

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
             VVSRSSAESEYR++A+AT++++W+  +  EL +S S+P  LWCDN SA  LA+NPVFHA
Sbjct: 1102 KVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHA 1161

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            RTKHIE+D+HFIR+ V  K + + ++  AEQ+ADI TK + + +FL    KL
Sbjct: 1162 RTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKL 1213


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  514 bits (1325), Expect = e-143
 Identities = 266/532 (50%), Positives = 349/532 (65%), Gaps = 1/532 (0%)
 Frame = -2

Query: 1781 NNHHMVTRSKRGIFKPKHFIA-HTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTW 1605
            N H MVTR+K GI K + FI  HTT     P +   A ++  W +AM  E+QAL+ N TW
Sbjct: 833  NTHPMVTRAKSGIHKKRSFIVQHTT----EPRTYSQASKNDSWVQAMNSEYQALLRNNTW 888

Query: 1604 DLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATT 1425
             LVP  +   ++  +WIYK+K   DGS++R KARLVA+GF Q  G+D+ +TFSPVVK  T
Sbjct: 889  SLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCT 948

Query: 1424 IRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGL 1245
            IRL+ ALA +  W+V+QLD+ NAFLNG LE+ ++M QP GF + TYP +VCKL K+LYGL
Sbjct: 949  IRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGL 1008

Query: 1244 KQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLR 1065
            KQAPRAW+  L+ +LLD GF+   +D SLF   +               +TG +   V  
Sbjct: 1009 KQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSH 1068

Query: 1064 IIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMA 885
             I  L+ KF L+ LG ++YFLGI+ Q       L Q KY++DLL++T ME   P  TP  
Sbjct: 1069 FISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGR 1128

Query: 884  VNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
            +   LS   G   ++P  YR T+GALQY+TLTRPDIAF VNK  QF+  P   HW+A KR
Sbjct: 1129 LGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKR 1188

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRYLKGT   GL F  ++S  L+ Y+DADWA C D+RRST G+C+F GSNL+ W S KQ
Sbjct: 1189 ILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQ 1248

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
             +VS+SSAESEYR + + T +L+W+ SL  EL +  S P  LWCDN SA  LA+NPVFH+
Sbjct: 1249 RLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTSPP-ILWCDNQSAAHLAANPVFHS 1307

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            R+KHIE+D+HFIREKV  + +++ +V   +QLADI TK L   +F  L  KL
Sbjct: 1308 RSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 1359


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  514 bits (1324), Expect = e-143
 Identities = 265/532 (49%), Positives = 348/532 (65%), Gaps = 1/532 (0%)
 Frame = -2

Query: 1781 NNHHMVTRSKRGIFKPKHFIA-HTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTW 1605
            N H MVTR+K GI K + FI  HTT     P +   A ++  W +AM  E+QAL+ N TW
Sbjct: 180  NTHPMVTRAKSGIHKKRSFIVQHTT----EPRTYSQAFKNDSWVQAMNSEYQALLRNNTW 235

Query: 1604 DLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATT 1425
             LVP  +   ++  +WIYK+K   DGS++R KARLVA+GF Q  G+D+ +TFSPVVK  T
Sbjct: 236  SLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCT 295

Query: 1424 IRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGL 1245
            IRL+ ALA +  W+V+QLD+ N FLNG LE+ ++M QP GF + TYP +VCKL K+LYGL
Sbjct: 296  IRLILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGL 355

Query: 1244 KQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLR 1065
            KQAPRAW+  L+ +LLD GF+   +D SLF   +               +TG + T V  
Sbjct: 356  KQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPTLVSH 415

Query: 1064 IIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMA 885
             I  L+ KF L+ LG ++YFLGI+ Q       L Q KY++DLL++T ME   P  TP  
Sbjct: 416  FISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGR 475

Query: 884  VNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
            +   LS   G   ++P  YR T+GALQY+TLTRPDIAF VNK  QF+  P   HW+A KR
Sbjct: 476  LGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKR 535

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRYLKGT   GL F  ++S   + Y+DADWA C D+RRST G+C+F GSNL+ W S KQ
Sbjct: 536  ILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQ 595

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
             +VS+SSAESEYR + + T +L+W+ SL  EL +  S P  LWCDN SA  LA+NPVFH+
Sbjct: 596  RLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTSPP-ILWCDNQSAAHLAANPVFHS 654

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKL 189
            R+KHIE+D+HFIREKV  + +++ +V   +QLADI TK L   +F  L  KL
Sbjct: 655  RSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 706


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  513 bits (1320), Expect = e-142
 Identities = 257/499 (51%), Positives = 334/499 (66%), Gaps = 2/499 (0%)
 Frame = -2

Query: 1694 PASTKAALQSTEWKEAMRIEFQALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLER 1515
            P +   AL+   WK AM  E+ ALV N+TW LVP      +I  KW+YK+K  ADG+L+R
Sbjct: 945  PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 1004

Query: 1514 LKARLVARGFEQFAGVDFLETFSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILE 1335
             KARLVA+GF+Q  G+D+ +TFSPVVKA TIR++ +LA +KGW+++QLD+ NAFL+G LE
Sbjct: 1005 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 1064

Query: 1334 DTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLF 1155
            + +YM QP GFED T P  VCKL K+LYGLKQAPRAW+  L   L+D GFK    D SLF
Sbjct: 1065 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLF 1124

Query: 1154 FQKSDAGXXXXXXXXXXXXITGDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCED 975
            F                  +      A   ++  LK +F LK LG ++YFLGIEV   ++
Sbjct: 1125 FLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1184

Query: 974  GFLLRQQKYLSDLLHKTGMENCHPCSTPMAVNTKLSNYSGDFF--TNPFLYRSTIGALQY 801
            G +L Q KY +DLL K GM +C P +TP++V+ KLS + G      +   YRS +GALQY
Sbjct: 1185 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 1244

Query: 800  LTLTRPDIAFCVNKLSQFLHSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYAD 621
            LTLTRPDIAF VNK+ QFLH+P   HWIA KR+LRYLK  +  GL+   S S  +  ++D
Sbjct: 1245 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD 1304

Query: 620  ADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSL 441
            ADWAGC D+RRSTGG  IF GSNLV W ++KQ  VSRSS ESEY+++A AT +++W+ +L
Sbjct: 1305 ADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTL 1364

Query: 440  CTELGISISTPHQLWCDNTSAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAG 261
              EL I      ++WCDN  A  L++NPVFHARTKHIEVD HF+RE+V+ K +E+  V+ 
Sbjct: 1365 LAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVST 1424

Query: 260  AEQLADILTKPLGTDRFLE 204
             +Q+AD  TKPL   R LE
Sbjct: 1425 NDQVADGFTKPLSV-RLLE 1442


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  512 bits (1319), Expect = e-142
 Identities = 253/520 (48%), Positives = 340/520 (65%), Gaps = 7/520 (1%)
 Frame = -2

Query: 1763 TRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWDL 1599
            TR + GI K K +   T    C      P + K AL    W++AM  E+ AL+ N TW L
Sbjct: 909  TRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWHL 968

Query: 1598 VPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTIR 1419
            VPY     +I  KW+YK+K  ADG+L+R KARLVA+GF+Q  G+D+ +TFSPVVKA TIR
Sbjct: 969  VPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 1028

Query: 1418 LMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQ 1239
            ++ ++A ++GW+++QLD+ NAFL+G LE+ +YM QP GFE ++ PD+VCKL K+LYGLKQ
Sbjct: 1029 IILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQ 1088

Query: 1238 APRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRII 1059
            APRAWY  L   L++ GF+   +D SLFF                  +      A   ++
Sbjct: 1089 APRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALL 1148

Query: 1058 DMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAVN 879
              L  +F LK LG ++YFLGIEV    +G +L Q+KY +DLL +  M NC P STP++V+
Sbjct: 1149 KDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVS 1208

Query: 878  TKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
             KL+ Y G      +   YRS +GALQYLTLTRPDIA+ VNK+ QFLH+P   HWIA KR
Sbjct: 1209 EKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKR 1268

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRYL   ++ GL    S+S  +  Y+DADWAG  D+R+STGG  +F GSNLV W ++KQ
Sbjct: 1269 ILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQ 1328

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
              VSRSS E+EY++VA  T +L+W+ +L  ELGI      ++WCDN  A  L++NPVFHA
Sbjct: 1329 PTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHA 1388

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPL 225
            RTKHIEVD HF+RE+V+ K +E+  V   +Q+AD  TK L
Sbjct: 1389 RTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKAL 1428


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  512 bits (1318), Expect = e-142
 Identities = 264/534 (49%), Positives = 344/534 (64%), Gaps = 12/534 (2%)
 Frame = -2

Query: 1790 IVQNNHHMVTRSKRGIFKPKHFIAHTTCLPEV-------PASTKAALQSTEWKEAMRIEF 1632
            + Q      TR +RGI K K +   T             P +   ALQ+T WK+AM IE+
Sbjct: 900  VTQAPSRPTTRLQRGIRKEKVYTDGTVKYKNTFLTVTGEPKNLTDALQNTNWKKAMDIEY 959

Query: 1631 QALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLET 1452
            +AL++N+TW LVP      VI  KW+YK+K   DGSL+R KARLVA+GF+Q  G+D+ +T
Sbjct: 960  EALMNNKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDT 1019

Query: 1451 FSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVC 1272
            FSPVVKA TIR++ ++A ++GW ++QLD+ NAFL+G LE+ +YM QP G+ED ++P +VC
Sbjct: 1020 FSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVC 1079

Query: 1271 KLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXIT 1092
            KL K+LYGLKQAPRAWY  L   L D GF+    D SLFF                  +T
Sbjct: 1080 KLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVT 1139

Query: 1091 GDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMEN 912
                 AV  ++  LK +F LK LG ++YFLGIEV    D  +L Q KY  DLL +  M +
Sbjct: 1140 SSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACDLLRRVNMFD 1199

Query: 911  CHPCSTPMAVNTKLSNYSGDFF-----TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQF 747
            C P STP++ + KLS + GD       TN   YRS +GALQYLTLTRPDIAF VNK+ QF
Sbjct: 1200 CKPVSTPLSTSEKLSAHEGDLLGPLDATN---YRSVVGALQYLTLTRPDIAFPVNKVCQF 1256

Query: 746  LHSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCI 567
            LH+P   HW A KR+LRYLK  +  GL+   S S  + AY+DADWAG  D+RRSTGG  +
Sbjct: 1257 LHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSDADWAGSLDDRRSTGGFAV 1316

Query: 566  FFGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDN 387
            F G NLV W ++KQ  VSRSS ESEY+++A AT +++W+ +L TEL +      +LWCDN
Sbjct: 1317 FLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSPPMAKLWCDN 1376

Query: 386  TSAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPL 225
              A  L+SNPVFHARTKHIEVD HF+RE+V+ K +E+  V   +Q+AD  TK L
Sbjct: 1377 LGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPTGDQVADGFTKAL 1430


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  509 bits (1311), Expect = e-141
 Identities = 258/527 (48%), Positives = 341/527 (64%), Gaps = 7/527 (1%)
 Frame = -2

Query: 1763 TRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWDL 1599
            TR + GI K K +   T    C      P + K AL    WK AM  E+ AL+ N TW L
Sbjct: 900  TRLRSGIRKEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKAAMEAEYDALIKNDTWHL 959

Query: 1598 VPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTIR 1419
            VPY     VI  KW+YK+K  ADG+L+R KARLVA+GF+Q  G+D+ +TFSPVVKA TIR
Sbjct: 960  VPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 1019

Query: 1418 LMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQ 1239
            ++ ++A ++GW+++QLD+ NAFL+G LE+ +YM QP GFE  + P++VCKL K+LYGLKQ
Sbjct: 1020 IILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQ 1079

Query: 1238 APRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRII 1059
            APRAWY  L   L++ GF+   +D SLFF                  I      A   ++
Sbjct: 1080 APRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALL 1139

Query: 1058 DMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAVN 879
              L  +F LK LG ++YFLGIEV    +G +L Q+KY +DLL +  M NC P STP++V+
Sbjct: 1140 KDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVS 1199

Query: 878  TKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
             KL+ Y G      +   YRS +GALQYLTLTRPDIA+ VNK+ QFLH+P  DHW A KR
Sbjct: 1200 EKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKR 1259

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRYL   ++ GL    S+S  +  Y+DADWAG  D+R+STGG  +F GSNLV W ++KQ
Sbjct: 1260 ILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQ 1319

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
              VSRSS E+EY++VA  T +L+W+ +L  ELGI      ++WCDN  A  L++NPVFHA
Sbjct: 1320 PTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHA 1379

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLE 204
            RTKHIEVD HF+RE+V+ K +E+  V   +Q+AD  TK L   R LE
Sbjct: 1380 RTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSV-RLLE 1425


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  508 bits (1309), Expect = e-141
 Identities = 259/527 (49%), Positives = 343/527 (65%), Gaps = 7/527 (1%)
 Frame = -2

Query: 1763 TRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWDL 1599
            TR ++G+ KPK +   T    C      P     AL    WK+AM IE+ AL+ N+TW L
Sbjct: 777  TRLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHL 836

Query: 1598 VPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTIR 1419
            VP      VI  KW+YK+K  ADGSL+R KARLVA+G++Q  G+D+ +TFSPVVK  TIR
Sbjct: 837  VPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIR 896

Query: 1418 LMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQ 1239
            ++ ++A ++GW++ QLD+ NAFL+G+LE+ +YM QP G+ED+T  ++VCKL K+LYGLKQ
Sbjct: 897  IILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQ 956

Query: 1238 APRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRII 1059
            APRAWY  L   LL  GF+   +D SLFF    +             +      A   ++
Sbjct: 957  APRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALL 1016

Query: 1058 DMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAVN 879
              L  +F LK LG +NYFLGIEV    DG +L Q KY SDLL K GM +C P STP++ +
Sbjct: 1017 SDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTS 1076

Query: 878  TKLSNYSGDFFTNPFL--YRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACKR 705
             KLS + G       +  YRS +GALQYLTLTRPDIAF VNK+ QFLH+P   HW A KR
Sbjct: 1077 EKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKR 1136

Query: 704  LLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQ 525
            +LRY+K  +  GL    S S  + A++DADWAG  D+R+STGG  +F GSNLV W ++KQ
Sbjct: 1137 ILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQ 1196

Query: 524  DVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFHA 345
              VSRSS ESEY+++A AT +L+W+  L TE+ I      +LWCDN  A  L++NP+FHA
Sbjct: 1197 PTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHA 1256

Query: 344  RTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLE 204
            RTKHIEVD HF+R++VA K +++ +V   +Q+AD  TKPL   R LE
Sbjct: 1257 RTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSV-RLLE 1302


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  507 bits (1305), Expect = e-141
 Identities = 257/536 (47%), Positives = 349/536 (65%), Gaps = 16/536 (2%)
 Frame = -2

Query: 1766 VTRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWD 1602
            VTRS+ G+ +PK +   T    CL E   P+S + AL S  WK+AM  EF AL+ N+TW 
Sbjct: 355  VTRSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHNKTWH 414

Query: 1601 LVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTI 1422
            LVP      +I +KW+YK+K  ADG+++R KARLVA+GF+Q  G+D+ +TFSPVVKA TI
Sbjct: 415  LVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 474

Query: 1421 RLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLK 1242
            RL+ ++A ++GW+++QLD+ NAFL+G L++ +YM QP GFED   P F+CKL K+LYGLK
Sbjct: 475  RLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCKLDKALYGLK 534

Query: 1241 QAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRI 1062
            QAPRAWY  L   L + GF    +D SLFF                  +    S AV  +
Sbjct: 535  QAPRAWYSRLSKKLQELGFSSSKADTSLFFYNKGHHKMFVLVYVDDIIVASSSSPAVNAL 594

Query: 1061 IDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAV 882
            +  L+  F LK LG ++YFLGIEV+      LL Q++Y ++LL +  M +C P STP++ 
Sbjct: 595  LKDLEKDFALKDLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLST 654

Query: 881  NTKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACK 708
              KLS   GD    ++   YRS +GALQYLTLTRPDI++ VNK+ QFL +P   HW A K
Sbjct: 655  AEKLSVEIGDELGPSDVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVK 714

Query: 707  RLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSD---------NRRSTGGHCIFFGS 555
            R+LRYLKGT   GL+   SSSN + A++DADWAG  D         +RRSTGG  +FFG 
Sbjct: 715  RILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGGFADRRSTGGFAVFFGD 774

Query: 554  NLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAV 375
            NL+ W ++KQ  VSRSS E+EY+++A A  +++W+  L TELGI      +LWCDN  A 
Sbjct: 775  NLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLWCDNLGAT 834

Query: 374  ALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFL 207
             + +NPVFHARTKHIEVD HF+RE+VA K +++  V+  +Q+AD  TKP+   + +
Sbjct: 835  YMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTKPISLQQLI 890


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  504 bits (1297), Expect = e-140
 Identities = 252/521 (48%), Positives = 343/521 (65%), Gaps = 7/521 (1%)
 Frame = -2

Query: 1766 VTRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWD 1602
            VTR ++GI KPK +   T    CL     P + + A+ ++ W+ AM  E+ A + N+TW 
Sbjct: 397  VTRLQKGISKPKRYTDGTVRYGCLTTTGEPENLREAMANSNWRLAMEQEYSAFMSNKTWH 456

Query: 1601 LVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTI 1422
            LVP +    +I  KW+YK+K  ADGS++R KARLVA+GF+Q  G+D+ +TFS VVKA TI
Sbjct: 457  LVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLVVKAATI 516

Query: 1421 RLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLK 1242
            RL+ ++A +KGW+++QLD+ NAFL+G LE+ +YM QP GFE+   P+++CKL K+LYGLK
Sbjct: 517  RLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDKALYGLK 576

Query: 1241 QAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRI 1062
            QAPRAWY  L   L + GF    +D SLFF                  +    +  V  +
Sbjct: 577  QAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSAEVVAAL 636

Query: 1061 IDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAV 882
            +  L+  F LK LG ++YFLGIEV+    G +L Q  Y SD+L + GM  C P STP++ 
Sbjct: 637  LKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPASTPLST 696

Query: 881  NTKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACK 708
              KLS   GDF    +   YRS +GALQYLTLTR D++F VNK+ QFLHSP   HW A K
Sbjct: 697  TEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVK 756

Query: 707  RLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKK 528
            R+LRY+KGT   GL+F  S S  + A++DADWAGCSD+RRSTGG  +F G NL+ W ++K
Sbjct: 757  RILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARK 816

Query: 527  QDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFH 348
            Q  VSRSS E+EY+++A ATT++ W+  +  EL I+  +  QLWCDN  A  L++NPVFH
Sbjct: 817  QATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFH 876

Query: 347  ARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPL 225
            ARTKHIE+D HF+RE+VA K +++  ++  +QLAD  TK L
Sbjct: 877  ARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSL 917


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  503 bits (1296), Expect = e-140
 Identities = 261/539 (48%), Positives = 348/539 (64%), Gaps = 3/539 (0%)
 Frame = -2

Query: 1784 QNNHHMVTRSKRGIFKPKHFIAHTTCLPEVPASTKAALQSTEWKEAMRIEFQALVDNQTW 1605
            Q  HHMVTRSK GIFKP  +        E P + + A+   +WKEAM  EF+AL+ N+TW
Sbjct: 719  QQPHHMVTRSKNGIFKPXVYTVDLNV--EEPNTFQEAISHPKWKEAMDEEFRALMKNKTW 776

Query: 1604 DLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATT 1425
             LV    +   +  +W++K+K + DGS+ R KARLVA+G+ Q  G DF ETFSPVVK TT
Sbjct: 777  SLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTT 836

Query: 1424 IRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPD--FVCKLKKSLY 1251
            IR++ A+A ++ W ++QLD+NNAFLNG L++ +YM QP GF+  T  +   VCKL K+LY
Sbjct: 837  IRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALY 896

Query: 1250 GLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAV 1071
            GLKQAPRAW+D LK SL   GF    SD SLF + ++              +TG  S  +
Sbjct: 897  GLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEI 956

Query: 1070 LRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFL-LRQQKYLSDLLHKTGMENCHPCST 894
              +I  L+  F LK LG ++YFLGIEV+   DG L L Q+KY+ DLL KT M+      T
Sbjct: 957  HELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPT 1016

Query: 893  PMAVNTKLSNYSGDFFTNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIA 714
            PM    KLS   GD   N F YRS +GALQY+T+TRP+IAF VNK+ QF+  P   HW A
Sbjct: 1017 PMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKA 1076

Query: 713  CKRLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQS 534
             KR+LRYL GT+  G+    S +  L  + DADW    D+RRST GHC+F G +LV W S
Sbjct: 1077 VKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSS 1136

Query: 533  KKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPV 354
            KKQ   SRSS E+EYRS+A+ T+++LWL SL +EL   ++    +WCDN S V+L++NPV
Sbjct: 1137 KKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPV 1196

Query: 353  FHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPLGTDRFLELCKKLCLRS 177
             H+RTKH+E+D++F+REKV  + + V HV   +Q+AD+ TKPL    F +L +KL + S
Sbjct: 1197 LHSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTVAS 1255


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  503 bits (1295), Expect = e-139
 Identities = 244/492 (49%), Positives = 331/492 (67%), Gaps = 2/492 (0%)
 Frame = -2

Query: 1694 PASTKAALQSTEWKEAMRIEFQALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLER 1515
            P S + A+ +  WKEAM  E+ AL++N+TW LVP      VI  KW+YKVK  ADGSL+R
Sbjct: 307  PQSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDR 366

Query: 1514 LKARLVARGFEQFAGVDFLETFSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILE 1335
             KARLVA+GF+Q  G+D+ +TFSPVVKA TIR++ +LA ++GW+++QLD+ NAFL+G+LE
Sbjct: 367  YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLE 426

Query: 1334 DTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLF 1155
            + +YM QP G+E  + P++VCKL K+LYGLKQAPRAWY  L   L + GF    +D SLF
Sbjct: 427  EEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLF 486

Query: 1154 FQKSDAGXXXXXXXXXXXXITGDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCED 975
            F K                +      A   ++  L   F LK LG ++YFLGIEV   +D
Sbjct: 487  FYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKD 546

Query: 974  GFLLRQQKYLSDLLHKTGMENCHPCSTPMAVNTKLSNYSGDFF--TNPFLYRSTIGALQY 801
            G +L Q+KY SDLL + GM  C P STP++ + KLS   G      +   YRS +GALQY
Sbjct: 547  GLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQY 606

Query: 800  LTLTRPDIAFCVNKLSQFLHSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYAD 621
            LTLTRPDI+F +NK+ QFLH+P   HW A KR+LRY+K T   GL+F  + S  +  ++D
Sbjct: 607  LTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSD 666

Query: 620  ADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSL 441
            ADWAG  D+RRSTGG  +F G NLV W ++KQ  VSRSS E+EY+++A AT +++W+ +L
Sbjct: 667  ADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTL 726

Query: 440  CTELGISISTPHQLWCDNTSAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAG 261
              ELG+      +LWCDN  A  L++NP+FHARTKHIEVD HF+RE+VA K +E+ +++ 
Sbjct: 727  LQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYIST 786

Query: 260  AEQLADILTKPL 225
             +Q+AD  TK +
Sbjct: 787  KDQVADGFTKAI 798


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  503 bits (1295), Expect = e-139
 Identities = 260/533 (48%), Positives = 347/533 (65%), Gaps = 13/533 (2%)
 Frame = -2

Query: 1784 QNNHHMV----TRSKRGIFKPKHF----IAHTTCLPEV---PASTKAALQSTEWKEAMRI 1638
            Q  HH++    TR + GI K K +    + + T    V   P +   AL+   WK+AM  
Sbjct: 698  QQQHHVISRPATRLQSGIRKEKVYTDGTVKYRTTFLTVTGEPENLDDALKDNNWKKAMDA 757

Query: 1637 EFQALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFL 1458
            EF AL +N+TW LVP      VI  KW+YK+K   DGSL+R KARLVA+GF+Q  G+D+ 
Sbjct: 758  EFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYE 817

Query: 1457 ETFSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDF 1278
            +TFSPVVKA TIR++ ++A +KGW ++QLD+ NAFL+G+LE+ +YM QP G+ED++ P +
Sbjct: 818  DTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGY 877

Query: 1277 VCKLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXX 1098
            VCKL K+LYGLKQAPRAWY  L   L D GF+   +D SLFF                  
Sbjct: 878  VCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDII 937

Query: 1097 ITGDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGM 918
            +T     AV  ++  L+ +F LK LG ++YFLGIEV     G +L Q KY++DLL +  M
Sbjct: 938  VTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNM 997

Query: 917  ENCHPCSTPMAVNTKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFL 744
             +C P STP++ + KLS   GD     +   YRS +GALQYLTLTRPDIAF VNK+ QFL
Sbjct: 998  FDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFL 1057

Query: 743  HSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIF 564
            H+P   HW A KR+LRYLK  +  GL+ + S S  + AY+DADWAG  D+RRSTGG  +F
Sbjct: 1058 HAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVF 1117

Query: 563  FGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNT 384
             G NLV W ++KQ  VSRSS ESEY+++A AT +++W+ +L  EL +   +  +LWCDN 
Sbjct: 1118 LGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNL 1177

Query: 383  SAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPL 225
             A  L++NPVFHARTKHIEVD HF+RE+V+ K +E+  V   +Q+AD  TK L
Sbjct: 1178 GAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKAL 1230


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  501 bits (1291), Expect = e-139
 Identities = 249/484 (51%), Positives = 325/484 (67%), Gaps = 2/484 (0%)
 Frame = -2

Query: 1694 PASTKAALQSTEWKEAMRIEFQALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLER 1515
            P +   AL+   WK AM  E+ ALV N+TW LVP      +I  KW+YK+K  ADG+L+R
Sbjct: 667  PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 726

Query: 1514 LKARLVARGFEQFAGVDFLETFSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILE 1335
             KARLVA+GF+Q  G+D+ +TFSPVVKA TIR++ +LA +KGW+++QLD+ NAFL+G LE
Sbjct: 727  YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 786

Query: 1334 DTIYMAQPSGFEDNTYPDFVCKLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLF 1155
            + +YM QP GFED T P  VCKL K+LYGLKQAPRAW+  L   L+D GFK   +D SLF
Sbjct: 787  EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 846

Query: 1154 FQKSDAGXXXXXXXXXXXXITGDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCED 975
            F                  +      A   ++  LK +F LK LG ++YFLGIEV   ++
Sbjct: 847  FLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQN 906

Query: 974  GFLLRQQKYLSDLLHKTGMENCHPCSTPMAVNTKLSNYSGDFF--TNPFLYRSTIGALQY 801
            G +L Q KY +DLL K GM +C P +TP++V+ KLS + G      +   YRS +GALQY
Sbjct: 907  GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 966

Query: 800  LTLTRPDIAFCVNKLSQFLHSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYAD 621
            LTLTRPDIAF VNK+ QFLH+P   HWIA KR+LRYLK  +  GL+   S S  +  ++D
Sbjct: 967  LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD 1026

Query: 620  ADWAGCSDNRRSTGGHCIFFGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSL 441
            ADWAGC D+RRSTGG  IF GSNLV W ++KQ  VSRSS ESEY+++A AT +++W+ +L
Sbjct: 1027 ADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTL 1086

Query: 440  CTELGISISTPHQLWCDNTSAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAG 261
              EL I      ++WCDN  A  L++NPVFHARTKHIEVD HF+RE++ S+F+ +G   G
Sbjct: 1087 LAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERLLSRFINLGF--G 1144

Query: 260  AEQL 249
              QL
Sbjct: 1145 CSQL 1148


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  501 bits (1290), Expect = e-139
 Identities = 254/521 (48%), Positives = 336/521 (64%), Gaps = 7/521 (1%)
 Frame = -2

Query: 1766 VTRSKRGIFKPKHFIAHTT---CLPEV--PASTKAALQSTEWKEAMRIEFQALVDNQTWD 1602
            VT  ++GI K K +   T    CL     P     AL  T WK AM  +F AL+ N+TW 
Sbjct: 719  VTHLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKFTALLHNKTWH 778

Query: 1601 LVPYSADMKVISNKWIYKVKTHADGSLERLKARLVARGFEQFAGVDFLETFSPVVKATTI 1422
            LVP      +I  KW+YK+K   DGSL+R KARLVA+GF+Q  G+D+ +TFSPVVKA TI
Sbjct: 779  LVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 838

Query: 1421 RLMFALAATKGWNVQQLDINNAFLNGILEDTIYMAQPSGFEDNTYPDFVCKLKKSLYGLK 1242
            R++ ++A ++GW ++QLD+ NAFL+GILE+ +YM QP G+ED  +PD+VCKL K+LYGLK
Sbjct: 839  RIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLK 898

Query: 1241 QAPRAWYDTLKGSLLDAGFKRCISDHSLFFQKSDAGXXXXXXXXXXXXITGDDSTAVLRI 1062
            QAPRAWY  L   L   GF+   +D SLFF                  +      AV  +
Sbjct: 899  QAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPAL 958

Query: 1061 IDMLKVKFKLKHLGSVNYFLGIEVQTCEDGFLLRQQKYLSDLLHKTGMENCHPCSTPMAV 882
            +  L+  F LK LG ++YFLGIEV     G +L Q+KY++DLL + GM +C P STP++ 
Sbjct: 959  LKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLST 1018

Query: 881  NTKLSNYSGDFF--TNPFLYRSTIGALQYLTLTRPDIAFCVNKLSQFLHSPRVDHWIACK 708
            + KL+ + GD     +   YRS +GALQYLTLTRPDI F VNK+ QFLH+P + HW A K
Sbjct: 1019 SEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMK 1078

Query: 707  RLLRYLKGTSAAGLQFTSSSSNCLEAYADADWAGCSDNRRSTGGHCIFFGSNLVLWQSKK 528
            R+LRYLK  +  GL+ + S S  +  Y+DADWAG  D+RRSTGG  +F G NLV W +KK
Sbjct: 1079 RILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKK 1138

Query: 527  QDVVSRSSAESEYRSVATATTDLLWLHSLCTELGISISTPHQLWCDNTSAVALASNPVFH 348
            Q  V RSS ESEY+++A AT +++W+ +L  EL +      +LWCDN  A  L+SNPVFH
Sbjct: 1139 QATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFH 1198

Query: 347  ARTKHIEVDVHFIREKVASKFVEVGHVAGAEQLADILTKPL 225
            ARTKHIEVD HF+RE++  K +EV  +   +Q+AD  TK L
Sbjct: 1199 ARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKAL 1239


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  500 bits (1288), Expect = e-139
 Identities = 243/490 (49%), Positives = 330/490 (67%), Gaps = 2/490 (0%)
 Frame = -2

Query: 1688 STKAALQSTEWKEAMRIEFQALVDNQTWDLVPYSADMKVISNKWIYKVKTHADGSLERLK 1509
            S + A+ +  WKEAM  E+ AL++N+TW LVP      VI  KW+YKVK  ADGSL+R K
Sbjct: 887  SLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYK 946

Query: 1508 ARLVARGFEQFAGVDFLETFSPVVKATTIRLMFALAATKGWNVQQLDINNAFLNGILEDT 1329
            ARLVA+GF+Q  G+D+ +TFSPVVKA TIR++ +LA ++GW+++QLD+ NAFL+G+LE+ 
Sbjct: 947  ARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEE 1006

Query: 1328 IYMAQPSGFEDNTYPDFVCKLKKSLYGLKQAPRAWYDTLKGSLLDAGFKRCISDHSLFFQ 1149
            +YM QP G+E  + P++VCKL K+LYGLKQAPRAWY  L   L + GF    +D SLFF 
Sbjct: 1007 VYMKQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFY 1066

Query: 1148 KSDAGXXXXXXXXXXXXITGDDSTAVLRIIDMLKVKFKLKHLGSVNYFLGIEVQTCEDGF 969
            K                +      A   ++  L   F LK LG ++YFLGIEV   +DG 
Sbjct: 1067 KKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGL 1126

Query: 968  LLRQQKYLSDLLHKTGMENCHPCSTPMAVNTKLSNYSGDFF--TNPFLYRSTIGALQYLT 795
            +L Q+KY SDLL + GM  C P STP++ + KLS   G      +   YRS +GALQYLT
Sbjct: 1127 MLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLT 1186

Query: 794  LTRPDIAFCVNKLSQFLHSPRVDHWIACKRLLRYLKGTSAAGLQFTSSSSNCLEAYADAD 615
            LTRPDI+F +NK+ QFLH+P   HW A KR+LRY+K T   GL+F  + S  +  ++DAD
Sbjct: 1187 LTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDAD 1246

Query: 614  WAGCSDNRRSTGGHCIFFGSNLVLWQSKKQDVVSRSSAESEYRSVATATTDLLWLHSLCT 435
            WAG  D+RRSTGG  +F G NLV W ++KQ  VSRSS E+EY+++A AT +++W+ +L  
Sbjct: 1247 WAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQ 1306

Query: 434  ELGISISTPHQLWCDNTSAVALASNPVFHARTKHIEVDVHFIREKVASKFVEVGHVAGAE 255
            ELG+      +LWCDN  A  L++NP+FHARTKHIEVD HF+RE+VA K +E+ +++  +
Sbjct: 1307 ELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKD 1366

Query: 254  QLADILTKPL 225
            Q+AD  TK +
Sbjct: 1367 QVADGFTKAI 1376