BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00021987
         (333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus...   145   4e-33
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise...   125   6e-27
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   114   1e-23
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   109   3e-22
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   109   5e-22
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   106   3e-21
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   106   3e-21
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   106   4e-21
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   103   2e-20
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           100   3e-19
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...    99   6e-19
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...    99   6e-19
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...    99   6e-19
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    98   1e-18
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    95   1e-17
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...    94   2e-17
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...    93   3e-17
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...    92   7e-17
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    91   2e-16
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    85   1e-14

>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
          Length = 457

 Score =  145 bits (367), Expect = 4e-33
 Identities = 74/116 (63%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQV-----RKEC 165
           F P ADG SIGK+L G+P +   TTALKWILKCCPH+PR LVQKLFRLRQV     RKE 
Sbjct: 53  FNPNADGCSIGKRLSGQPADAK-TTALKWILKCCPHIPRCLVQKLFRLRQVHFLLIRKES 111

Query: 166 SSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
           S+ E  EQRP+R+GAKDLM IGDRI+LPKSVD  S  TTA++++F  E++ +FV+S
Sbjct: 112 SNMEDKEQRPKRIGAKDLMDIGDRIFLPKSVDGTSPSTTAESRNFFDEKEMEFVRS 167


>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
          Length = 165

 Score =  125 bits (314), Expect = 6e-27
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSAET 180
           F+ TAD  S GK+++GR   T+ TT LKWIL CCP LPRSLVQKLFRLR+VRK+CS   T
Sbjct: 7   FSETADACSTGKRIFGRHPVTNMTT-LKWILNCCPQLPRSLVQKLFRLRRVRKKCSYF-T 64

Query: 181 NEQRPRRVGAKDLMGIGDRIYLPKSVD-ERSRPTTADNQSFSSEEDRKFVQS 333
            E +P+RVGA DLM +GD I+LPKSVD E S PT+++      EE+ +FV+S
Sbjct: 65  EEMQPKRVGATDLMEVGDIIFLPKSVDGEASSPTSSNKNGLFDEEESRFVRS 116


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  114 bits (285), Expect = 1e-23
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 11/122 (9%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG+++GK+L    +      ++S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E
Sbjct: 61  FSPTVDGTAVGKELASEGDSITGSTDSSTTTALRWILRCRPDLPRTLVQKLFRLRQVRRE 120

Query: 163 ----CSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSF-SSEEDRKFV 327
               C   E    + +RV AK+ + +GDRIYLP SVD  + P  A  +SF  SEE+RKFV
Sbjct: 121 MSVSCDGDEVQRSQLKRVAAKESLNVGDRIYLPLSVDNDAPPPPAKKESFRCSEEERKFV 180

Query: 328 QS 333
            S
Sbjct: 181 CS 182


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  109 bits (273), Expect = 3e-22
 Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 8/119 (6%)
 Frame = +1

Query: 1   FTPTADGSSIGKKL--------YGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           FT T +G+++G++L        Y +P   +ATTALKW+ +CCP +PR+LVQKLFRLRQVR
Sbjct: 58  FTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKLFRLRQVR 117

Query: 157 KECSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
           +E S  + + Q  +RVG KD M +GDRI LP SV E   P     +   SEE+ +F++S
Sbjct: 118 REASDMDQSVQPLKRVGTKDSMNLGDRICLPISVKE--FPDHKQKEGHCSEEEAEFIRS 174


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  109 bits (272), Expect = 5e-22
 Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYG-----RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKEC 165
           FT T +G+++G++L G     +   T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ 
Sbjct: 64  FTATVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDS 123

Query: 166 SSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
           S+ E  EQRP+RV AK+ M +GDRI+LP +V  +  P+       SSEE+RKFV S
Sbjct: 124 SNVE--EQRPKRVSAKESMNVGDRIFLPITV--QKFPSEKVVYYPSSEEERKFVHS 175


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  106 bits (265), Expect = 3e-21
 Identities = 58/116 (50%), Positives = 79/116 (68%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYG-----RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKEC 165
           FT   +G+++G++L G         T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ 
Sbjct: 64  FTAAVNGAALGRELAGVKMDVNENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDS 123

Query: 166 SSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
           S+ E  EQRP+RV AK+ M +GDRI+LP +V  +  P+       SSEE+RKFV S
Sbjct: 124 SNVE--EQRPKRVSAKESMNVGDRIFLPITV--QKFPSEKVVYYPSSEEERKFVHS 175


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  106 bits (265), Expect = 3e-21
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 12/123 (9%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG+++GK L    +      + S TTAL+WIL+C P LPR+LVQKLFRLRQVR++
Sbjct: 61  FSPTIDGTAVGKDLLSDGDSVKASTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRQ 120

Query: 163 CSSA----ETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPT-TADNQSFS-SEEDRKF 324
            S +    E    + +RV AK+ + +GDRIYLP SVD  + PT  A  +SF  SEE+RKF
Sbjct: 121 MSLSVDGHELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPPTPPAKKESFQCSEEERKF 180

Query: 325 VQS 333
           V S
Sbjct: 181 VCS 183


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  106 bits (264), Expect = 4e-21
 Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 9/120 (7%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEETSA-----TTALKWILKCCPHLPRSLVQKLFRLRQVRKE- 162
           F+PT D +++GK+L+   +   A     TTAL+WIL+C P LPR+LVQKLFRLRQVR+E 
Sbjct: 64  FSPTIDAAAVGKELFSDGDSVKASSDGSTTALRWILRCRPDLPRTLVQKLFRLRQVRREM 123

Query: 163 ---CSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
              C   E    + +RV AK+ + +GDRIYLP SV+  + P         SEE+RKFV S
Sbjct: 124 SLSCDGDELQRSQLKRVAAKESLNLGDRIYLPLSVNNDAPPPAKKESFCCSEEERKFVCS 183


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  103 bits (258), Expect = 2e-20
 Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 12/123 (9%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG+++GK L    +      + S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E
Sbjct: 61  FSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRE 120

Query: 163 CSSA----ETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPT-TADNQSFS-SEEDRKF 324
            S +    E    + +RV AK+ + +GDRIYLP SVD  +  T  A  +SF  S+E+RKF
Sbjct: 121 MSMSVDGDELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERKF 180

Query: 325 VQS 333
           V S
Sbjct: 181 VCS 183


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  100 bits (248), Expect = 3e-19
 Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 16/126 (12%)
 Frame = +1

Query: 4   TPTADGSSIGKKLYGRPEE---------TSATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           T T DG+ +GK + G  ++         ++ATTALKW+++CCP LPRSLVQKLFRLRQVR
Sbjct: 56  TATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQKLFRLRQVR 115

Query: 157 KECSSAE-------TNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEED 315
           +E  + E         + R RRV AKD + +GD+I+LP SV E         + F +EE+
Sbjct: 116 RESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISVKEL---PVEKKECFCNEEE 172

Query: 316 RKFVQS 333
            KF++S
Sbjct: 173 VKFIRS 178


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/119 (46%), Positives = 74/119 (62%), Gaps = 9/119 (7%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEETSA--TTALKWILKCCPHLPRSLVQKLFRLRQVRKEC--- 165
           FT T + S +G KL G+P   +A  TTA+KW+++CCP LPRSLVQKLFRLRQVR+E    
Sbjct: 69  FTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQVRRESHVL 128

Query: 166 ----SSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQ 330
                  +    + +RVGAKD + IGDRI+LP SV E         +S  +EE+  F++
Sbjct: 129 EVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFRE---EKQESGCTEEELNFIR 184


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 25/136 (18%)
 Frame = +1

Query: 1   FTPTADGSSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLF 138
           FT T +GS++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLF
Sbjct: 56  FTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLF 115

Query: 139 RLRQVRK-----ECS--SAETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSRPTTA 285
           RLRQVR+     ECS    E  E+  +RV AKD M +GDRI+LP SV E    +      
Sbjct: 116 RLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPND 175

Query: 286 DNQSFSSEEDRKFVQS 333
             + + SEE+  F++S
Sbjct: 176 KKECYCSEEEVTFIRS 191


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 25/136 (18%)
 Frame = +1

Query: 1   FTPTADGSSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLF 138
           FT T +GS++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLF
Sbjct: 56  FTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLF 115

Query: 139 RLRQVRK-----ECS--SAETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSRPTTA 285
           RLRQVR+     ECS    E  E+  +RV AKD M +GDRI+LP SV E    +      
Sbjct: 116 RLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPND 175

Query: 286 DNQSFSSEEDRKFVQS 333
             + + SEE+  F++S
Sbjct: 176 KKECYCSEEEVTFIRS 191


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 15/103 (14%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEETS--------ATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           FTP  D SS+GK L G   + +        +TTALKW+++CCP LPRSLVQKLFRLRQVR
Sbjct: 62  FTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVR 121

Query: 157 KECSS-------AETNEQRPRRVGAKDLMGIGDRIYLPKSVDE 264
           +E  +        +  E R +RV AKDLM +GD+I LP +V+E
Sbjct: 122 RESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEE 164


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/123 (43%), Positives = 78/123 (63%), Gaps = 12/123 (9%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           +T T +GS +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR+VR+ 
Sbjct: 66  YTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVRRG 125

Query: 163 CSSAETNE------QRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKF 324
            S  E +E       + +RV AKD++ +GD+I+LP SV   S   T D   + ++E+  F
Sbjct: 126 SSMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNKEEETF 182

Query: 325 VQS 333
           + S
Sbjct: 183 MHS 185


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRP--EETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSA 174
           +T T  GS++GK L      + ++ TTALKW+L+CCP LPR+LVQKLFRLRQV++E  + 
Sbjct: 134 YTSTISGSALGKALSATATAKASTETTALKWVLRCCPELPRNLVQKLFRLRQVKRELLNV 193

Query: 175 ETN--EQRPRRVGAKDLMGIGDRIYLPKSV 258
                E + +RV AKDLM +GDRI+LP SV
Sbjct: 194 GDGEMEHKTKRVAAKDLMNVGDRIFLPISV 223


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGR--PEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSA 174
           +T T +GS +G  L  R   +  S TTALKW+L+CCP LPR+LVQKLFRLRQVR+E    
Sbjct: 64  YTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELPRNLVQKLFRLRQVRRESPVM 123

Query: 175 ET-------NEQRPRRVGAKDLMGIGDRIYLPKSV 258
           E+        E R +RV AKD M +GDRI+LP SV
Sbjct: 124 ESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV 158


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 9/120 (7%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLYGRPEET--SATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSA 174
           FT T DGS++G++L   P ++  S TTALKW+L+CCP LPR+ VQKLFRL QVR+E  S 
Sbjct: 87  FTSTIDGSALGRQL-ACPSKSPISETTALKWVLQCCPGLPRNFVQKLFRLSQVRRESPSL 145

Query: 175 ETN-------EQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
           +++       E + +RV AKD + +GDRI+LP S+ E     +   +   +EE+  F+QS
Sbjct: 146 DSSANEGHEQEIKLKRVAAKDSLKLGDRIFLPISIQE---SPSRKEKCPCTEEEVGFIQS 202


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 7/118 (5%)
 Frame = +1

Query: 1   FTPTADGSSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           +T T +GS +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR+V ++
Sbjct: 66  YTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVPRQ 125

Query: 163 CS-SAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
            +     +  + +RV AKD++ +GD+I+LP SV   S   T D   + ++E+  F+ S
Sbjct: 126 LNVGCGNSHHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNKEEETFMHS 180


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 9/118 (7%)
 Frame = +1

Query: 7   PTADGSSIGKKLY-GRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE------- 162
           P+  G+S+   +   +  +  +TTALKW+L+CCP +PRSL+QKLFRLRQVRKE       
Sbjct: 53  PSFPGASLSPSISTAKTAKAPSTTALKWVLRCCPQVPRSLIQKLFRLRQVRKESLNPAIA 112

Query: 163 -CSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSRPTTADNQSFSSEEDRKFVQS 333
            C   +   Q+ +RV AKD +  GDRI+LP +V+        ++    ++E+ ++++S
Sbjct: 113 SCLHKQAQYQQIKRVFAKDTLNSGDRIFLPITVNP---AVEVEDDYICNKEEMEYIRS 167