BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00021986
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus...   164   2e-38
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise...   145   6e-33
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   126   3e-27
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   122   7e-26
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   121   9e-26
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   120   3e-25
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   120   3e-25
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   119   3e-25
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   116   3e-24
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           115   6e-24
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...   114   2e-23
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   114   2e-23
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   114   2e-23
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   111   9e-23
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   106   4e-21
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   105   7e-21
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   105   7e-21
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   101   9e-20
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   100   2e-19
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    98   1e-18

>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
          Length = 457

 Score =  164 bits (414), Expect = 2e-38
 Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQV-----RKEC 165
           F P ADGCSIGK+L G+P +   TTALKWILKCCPH+PR LVQKLFRLRQV     RKE 
Sbjct: 53  FNPNADGCSIGKRLSGQPADAK-TTALKWILKCCPHIPRCLVQKLFRLRQVHFLLIRKES 111

Query: 166 SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELY 345
           S  E  EQRP+R+GAKDLM IGDRI+LPKSVD  S  TTA++++F  E++ +FV+SLELY
Sbjct: 112 SNMEDKEQRPKRIGAKDLMDIGDRIFLPKSVDGTSPSTTAESRNFFDEKEMEFVRSLELY 171

Query: 346 KDSAI 360
           KD AI
Sbjct: 172 KDPAI 176


>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
          Length = 165

 Score =  145 bits (366), Expect = 6e-33
 Identities = 76/121 (62%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSGAET 180
           F+ TAD CS GK+++GR   T+ TT LKWIL CCP LPRSLVQKLFRLR+VRK+CS   T
Sbjct: 7   FSETADACSTGKRIFGRHPVTNMTT-LKWILNCCPQLPRSLVQKLFRLRRVRKKCS-YFT 64

Query: 181 NEQRPRRVGAKDLMGIGDRIYLPKSVD-ERSHPTTADNQSFSSEEDRKFVQSLELYKDSA 357
            E +P+RVGA DLM +GD I+LPKSVD E S PT+++      EE+ +FV+SLELYKDSA
Sbjct: 65  EEMQPKRVGATDLMEVGDIIFLPKSVDGEASSPTSSNKNGLFDEEESRFVRSLELYKDSA 124

Query: 358 I 360
           I
Sbjct: 125 I 125


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  126 bits (317), Expect = 3e-27
 Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 11/131 (8%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG ++GK+L    +      ++S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E
Sbjct: 61  FSPTVDGTAVGKELASEGDSITGSTDSSTTTALRWILRCRPDLPRTLVQKLFRLRQVRRE 120

Query: 163 ----CSGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSF-SSEEDRKFV 327
               C G E    + +RV AK+ + +GDRIYLP SVD  + P  A  +SF  SEE+RKFV
Sbjct: 121 MSVSCDGDEVQRSQLKRVAAKESLNVGDRIYLPLSVDNDAPPPPAKKESFRCSEEERKFV 180

Query: 328 QSLELYKDSAI 360
            SL LYKD +I
Sbjct: 181 CSLVLYKDPSI 191


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  122 bits (305), Expect = 7e-26
 Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYG-----RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKEC 165
           FT T +G ++G++L G     +   T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ 
Sbjct: 64  FTATVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDS 123

Query: 166 SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELY 345
           S  E  EQRP+RV AK+ M +GDRI+LP +V  +  P+       SSEE+RKFV SLELY
Sbjct: 124 SNVE--EQRPKRVSAKESMNVGDRIFLPITV--QKFPSEKVVYYPSSEEERKFVHSLELY 179

Query: 346 KDSAI 360
           KD  I
Sbjct: 180 KDPEI 184


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  121 bits (304), Expect = 9e-26
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 8/128 (6%)
 Frame = +1

Query: 1   FTPTADGCSIGKKL--------YGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           FT T +G ++G++L        Y +P   +ATTALKW+ +CCP +PR+LVQKLFRLRQVR
Sbjct: 58  FTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKLFRLRQVR 117

Query: 157 KECSGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSL 336
           +E S  + + Q  +RVG KD M +GDRI LP SV E   P     +   SEE+ +F++SL
Sbjct: 118 REASDMDQSVQPLKRVGTKDSMNLGDRICLPISVKE--FPDHKQKEGHCSEEEAEFIRSL 175

Query: 337 ELYKDSAI 360
            LYKD AI
Sbjct: 176 VLYKDPAI 183


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  120 bits (300), Expect = 3e-25
 Identities = 65/129 (50%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEETSA-----TTALKWILKCCPHLPRSLVQKLFRLRQVRKE- 162
           F+PT D  ++GK+L+   +   A     TTAL+WIL+C P LPR+LVQKLFRLRQVR+E 
Sbjct: 64  FSPTIDAAAVGKELFSDGDSVKASSDGSTTALRWILRCRPDLPRTLVQKLFRLRQVRREM 123

Query: 163 ---CSGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQS 333
              C G E    + +RV AK+ + +GDRIYLP SV+  + P         SEE+RKFV S
Sbjct: 124 SLSCDGDELQRSQLKRVAAKESLNLGDRIYLPLSVNNDAPPPAKKESFCCSEEERKFVCS 183

Query: 334 LELYKDSAI 360
           L LYKD AI
Sbjct: 184 LVLYKDPAI 192


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  120 bits (300), Expect = 3e-25
 Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYG-----RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKEC 165
           FT   +G ++G++L G         T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ 
Sbjct: 64  FTAAVNGAALGRELAGVKMDVNENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDS 123

Query: 166 SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELY 345
           S  E  EQRP+RV AK+ M +GDRI+LP +V  +  P+       SSEE+RKFV SLELY
Sbjct: 124 SNVE--EQRPKRVSAKESMNVGDRIFLPITV--QKFPSEKVVYYPSSEEERKFVHSLELY 179

Query: 346 KDSAI 360
           KD+ I
Sbjct: 180 KDAEI 184


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  119 bits (299), Expect = 3e-25
 Identities = 70/132 (53%), Positives = 88/132 (66%), Gaps = 12/132 (9%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG ++GK L    +      + S TTAL+WIL+C P LPR+LVQKLFRLRQVR++
Sbjct: 61  FSPTIDGTAVGKDLLSDGDSVKASTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRQ 120

Query: 163 CS----GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPT-TADNQSFS-SEEDRKF 324
            S    G E    + +RV AK+ + +GDRIYLP SVD  + PT  A  +SF  SEE+RKF
Sbjct: 121 MSLSVDGHELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPPTPPAKKESFQCSEEERKF 180

Query: 325 VQSLELYKDSAI 360
           V SL LYKD AI
Sbjct: 181 VCSLVLYKDPAI 192


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/132 (52%), Positives = 87/132 (65%), Gaps = 12/132 (9%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           F+PT DG ++GK L    +      + S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E
Sbjct: 61  FSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRRE 120

Query: 163 CS----GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPT-TADNQSFS-SEEDRKF 324
            S    G E    + +RV AK+ + +GDRIYLP SVD  +  T  A  +SF  S+E+RKF
Sbjct: 121 MSMSVDGDELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERKF 180

Query: 325 VQSLELYKDSAI 360
           V SL LYKD AI
Sbjct: 181 VCSLVLYKDPAI 192


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  115 bits (288), Expect = 6e-24
 Identities = 64/135 (47%), Positives = 86/135 (63%), Gaps = 16/135 (11%)
 Frame = +1

Query: 4   TPTADGCSIGKKLYGRPEE---------TSATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           T T DG  +GK + G  ++         ++ATTALKW+++CCP LPRSLVQKLFRLRQVR
Sbjct: 56  TATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQKLFRLRQVR 115

Query: 157 KEC-------SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEED 315
           +E        +G +  + R RRV AKD + +GD+I+LP SV E         + F +EE+
Sbjct: 116 RESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISVKEL---PVEKKECFCNEEE 172

Query: 316 RKFVQSLELYKDSAI 360
            KF++SLELYKD AI
Sbjct: 173 VKFIRSLELYKDPAI 187


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/129 (48%), Positives = 82/129 (63%), Gaps = 9/129 (6%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEETSA--TTALKWILKCCPHLPRSLVQKLFRLRQVRKEC--- 165
           FT T +   +G KL G+P   +A  TTA+KW+++CCP LPRSLVQKLFRLRQVR+E    
Sbjct: 69  FTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQVRRESHVL 128

Query: 166 ----SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQS 333
                G +    + +RVGAKD + IGDRI+LP SV E         +S  +EE+  F++ 
Sbjct: 129 EVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFRE---EKQESGCTEEELNFIRG 185

Query: 334 LELYKDSAI 360
           LELYKD AI
Sbjct: 186 LELYKDPAI 194


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  114 bits (284), Expect = 2e-23
 Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 25/145 (17%)
 Frame = +1

Query: 1   FTPTADGCSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLF 138
           FT T +G ++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLF
Sbjct: 56  FTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLF 115

Query: 139 RLRQVRK-----ECS--GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSHPTTA 285
           RLRQVR+     ECS  G E  E+  +RV AKD M +GDRI+LP SV E    +      
Sbjct: 116 RLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPND 175

Query: 286 DNQSFSSEEDRKFVQSLELYKDSAI 360
             + + SEE+  F++SLELYKD AI
Sbjct: 176 KKECYCSEEEVTFIRSLELYKDPAI 200


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  114 bits (284), Expect = 2e-23
 Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 25/145 (17%)
 Frame = +1

Query: 1   FTPTADGCSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLF 138
           FT T +G ++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLF
Sbjct: 56  FTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLF 115

Query: 139 RLRQVRK-----ECS--GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSHPTTA 285
           RLRQVR+     ECS  G E  E+  +RV AKD M +GDRI+LP SV E    +      
Sbjct: 116 RLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPND 175

Query: 286 DNQSFSSEEDRKFVQSLELYKDSAI 360
             + + SEE+  F++SLELYKD AI
Sbjct: 176 KKECYCSEEEVTFIRSLELYKDPAI 200


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  111 bits (278), Expect = 9e-23
 Identities = 63/135 (46%), Positives = 84/135 (62%), Gaps = 15/135 (11%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEETS--------ATTALKWILKCCPHLPRSLVQKLFRLRQVR 156
           FTP  D  S+GK L G   + +        +TTALKW+++CCP LPRSLVQKLFRLRQVR
Sbjct: 62  FTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVR 121

Query: 157 KEC-------SGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEED 315
           +E         G +  E R +RV AKDLM +GD+I LP +V+E     +  ++   ++E+
Sbjct: 122 RESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEF---PSEKHEYHCNDEE 178

Query: 316 RKFVQSLELYKDSAI 360
             FV +LELYKD AI
Sbjct: 179 INFVHNLELYKDPAI 193


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  106 bits (264), Expect = 4e-21
 Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 10/130 (7%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGR--PEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE---- 162
           +T T +G  +G  L  R   +  S TTALKW+L+CCP LPR+LVQKLFRLRQVR+E    
Sbjct: 64  YTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELPRNLVQKLFRLRQVRRESPVM 123

Query: 163 --CS-GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQS-FSSEEDRKFVQ 330
             C+ G +  E R +RV AKD M +GDRI+LP SV        A+ Q    +EE+  F++
Sbjct: 124 ESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV----KVLPAEKQDCHCNEEEINFIR 179

Query: 331 SLELYKDSAI 360
            LELYKD+AI
Sbjct: 180 GLELYKDAAI 189


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  105 bits (262), Expect = 7e-21
 Identities = 64/129 (49%), Positives = 86/129 (66%), Gaps = 9/129 (6%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRPEET--SATTALKWILKCCPHLPRSLVQKLFRLRQVRKE---- 162
           FT T DG ++G++L   P ++  S TTALKW+L+CCP LPR+ VQKLFRL QVR+E    
Sbjct: 87  FTSTIDGSALGRQL-ACPSKSPISETTALKWVLQCCPGLPRNFVQKLFRLSQVRRESPSL 145

Query: 163 -CSGAETNEQ--RPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQS 333
             S  E +EQ  + +RV AKD + +GDRI+LP S+ E     +   +   +EE+  F+QS
Sbjct: 146 DSSANEGHEQEIKLKRVAAKDSLKLGDRIFLPISIQE---SPSRKEKCPCTEEEVGFIQS 202

Query: 334 LELYKDSAI 360
           LELYKDSAI
Sbjct: 203 LELYKDSAI 211


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  105 bits (262), Expect = 7e-21
 Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLYGRP--EETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKEC--S 168
           +T T  G ++GK L      + ++ TTALKW+L+CCP LPR+LVQKLFRLRQV++E    
Sbjct: 134 YTSTISGSALGKALSATATAKASTETTALKWVLRCCPELPRNLVQKLFRLRQVKRELLNV 193

Query: 169 GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELYK 348
           G    E + +RV AKDLM +GDRI+LP SV           +    E++  F++ LELYK
Sbjct: 194 GDGEMEHKTKRVAAKDLMNVGDRIFLPISVQALPF---EKQKCHCGEKEANFIRGLELYK 250

Query: 349 DSAI 360
           D AI
Sbjct: 251 DEAI 254


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  101 bits (252), Expect = 9e-20
 Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 12/132 (9%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           +T T +G  +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR+VR+ 
Sbjct: 66  YTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVRRG 125

Query: 163 CSGAETNE------QRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKF 324
            S  E +E       + +RV AKD++ +GD+I+LP SV   S   T D   + ++E+  F
Sbjct: 126 SSMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNKEEETF 182

Query: 325 VQSLELYKDSAI 360
           + SL L+KD AI
Sbjct: 183 MHSLVLHKDPAI 194


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  100 bits (249), Expect = 2e-19
 Identities = 55/127 (43%), Positives = 83/127 (65%), Gaps = 7/127 (5%)
 Frame = +1

Query: 1   FTPTADGCSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 162
           +T T +G  +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR+V ++
Sbjct: 66  YTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVPRQ 125

Query: 163 CS-GAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLE 339
            + G   +  + +RV AKD++ +GD+I+LP SV   S   T D   + ++E+  F+ SL 
Sbjct: 126 LNVGCGNSHHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNKEEETFMHSLV 182

Query: 340 LYKDSAI 360
           L+KD AI
Sbjct: 183 LHKDPAI 189


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 52/127 (40%), Positives = 80/127 (62%), Gaps = 9/127 (7%)
 Frame = +1

Query: 7   PTADGCSIGKKLY-GRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE------- 162
           P+  G S+   +   +  +  +TTALKW+L+CCP +PRSL+QKLFRLRQVRKE       
Sbjct: 53  PSFPGASLSPSISTAKTAKAPSTTALKWVLRCCPQVPRSLIQKLFRLRQVRKESLNPAIA 112

Query: 163 -CSGAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLE 339
            C   +   Q+ +RV AKD +  GDRI+LP +V+        ++    ++E+ ++++SLE
Sbjct: 113 SCLHKQAQYQQIKRVFAKDTLNSGDRIFLPITVNP---AVEVEDDYICNKEEMEYIRSLE 169

Query: 340 LYKDSAI 360
           +YKD+AI
Sbjct: 170 VYKDAAI 176