BLASTX nr result
ID: Mentha27_contig00019657
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha27_contig00019657 (4479 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 959 0.0 emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 938 0.0 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 929 0.0 gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 927 0.0 emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 926 0.0 gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 924 0.0 gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 924 0.0 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 912 0.0 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 910 0.0 gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 901 0.0 gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 886 0.0 gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 881 0.0 gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 877 0.0 gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 872 0.0 emb|CAA20201.1| putative transposable element [Arabidopsis thali... 864 0.0 dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 864 0.0 emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera] 861 0.0 sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 857 0.0 gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 848 0.0 dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 848 0.0 >gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1335 Score = 959 bits (2479), Expect = 0.0 Identities = 530/1258 (42%), Positives = 739/1258 (58%), Gaps = 18/1258 (1%) Frame = -1 Query: 4470 SKDIDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYG--RDSITL 4297 +K IDENID F K++ D+ D+ A++LL+++P Y+ L ++Y R+ + L Sbjct: 105 NKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSREKLRL 164 Query: 4296 DIVVNALKSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXX 4117 D V+ A + KEREL N + ARGRP + Sbjct: 165 DDVMVAARDKERELSQNN--RPVVEGHFARGRPDG-----------KNNNQGNKGKNRSR 211 Query: 4116 XXXXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENF----GEMYVVTDVSDMP 3949 C+ CG+ GH+ K C + NGE+ E + V Sbjct: 212 SKSADGKRVCWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLAT 271 Query: 3948 XXXXXXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICL 3769 +D+GCSFHM+P ++ F +++E+ GYV + N+ V G+G I + Sbjct: 272 DETLVVTDSIANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKI 331 Query: 3768 KFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNN 3589 + + G+ L +VR++P++ NL+S LED G K G++KI+KG + K +K++ Sbjct: 332 RNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDT 391 Query: 3588 LYICHAESVLDNVNCVNSVQ-DDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFC 3412 LYI + V + +S + D+T+LWH RLGHMS KG+EIL K G ++ + + FC Sbjct: 392 LYIL--DGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEFC 449 Query: 3411 DSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGN-RYFLSVIDDYSR 3235 + CV GKQH V F P L Y+H+D+WG P+ GN +YF+S +DDYSR Sbjct: 450 EDCVYGKQHRVSF----APAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSR 505 Query: 3234 KVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRH 3055 KVW + L+ K + ++F +WK ++ENQ+ +K+K LRTDNGLE+CN + C + GI RH Sbjct: 506 KVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRH 565 Query: 3054 KTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGK 2875 KT YTPQQNG+ ER+NRT+++KVR + G+ K+FW EA TA YL+NRSPS + Sbjct: 566 KTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFD 625 Query: 2874 CPEHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPG 2695 PE ++G LPDLS+L+ FGC A++H KL PRS+K +F YPEGVKGY++W + Sbjct: 626 LPEEKWTGALPDLSSLRKFGCLAYIHADQGKLNPRSKKGIFTSYPEGVKGYKVW--VLED 683 Query: 2694 FKVVVSRDVIFNESE-FPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQL--PEMDPL 2524 K V+SR+VIF E F L + S+SD+ ++ +PD+ E D Sbjct: 684 KKCVISRNVIFREQVMFKDLKGDSQNTISESDL--EDLRVNPDMNDQEFTDQGGATQDNS 741 Query: 2523 NDVHAENDYELGVNN----HDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEK 2356 N A + +N+ DEE E D + S YQL RDR RR +K K Sbjct: 742 NPSEATTSHNPVLNSPTHSQDEES------EEEDSDAVEDLSTYQLVRDRVRRTIKANPK 795 Query: 2355 FNEFQMSFFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKP 2176 +NE M FA+ E EP SY+EA+ + +W AMK EM S+ N TW LV KP Sbjct: 796 YNESNMVGFAY-YSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKP 854 Query: 2175 DSISVVDCKWLFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIML 2005 + + ++ C+W+F K E+ RF ARLVAKGFTQKEG+DY EIF+PVVK ++R +L Sbjct: 855 EKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLL 914 Query: 2004 ALVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPR 1825 ++V +N EL+QMDV TAFLHG L++ IYM QPEGF + N VCLLK++LYGLKQSPR Sbjct: 915 SMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPR 974 Query: 1824 QWNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNC 1645 QWN+RFD+ M+ +K+ RS YD C+YFK + I+LL+YVDDML+ S + ++ Sbjct: 975 QWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQL 1034 Query: 1644 LCDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASH 1465 L F+MKDLGDA+KILGM I R+R L L+Q YV+K+L F M NAKPV+ PL H Sbjct: 1035 LSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIH 1094 Query: 1464 FVLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHW 1285 F L + + + MK VPY+N IGS+MY MI TRPD+AY + ++SR+MS P HW Sbjct: 1095 FKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHW 1154 Query: 1284 EALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCIS 1105 +A+KW+LRY++ T L F K D L L GY DS+ ++ D R+S T YVFT+ G+ IS Sbjct: 1155 QAVKWVLRYMRGTEKKKLCFRKQEDFL-LRGYCDSDYGSNFDTRRSITGYVFTVGGNTIS 1213 Query: 1104 WKSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKN 925 WKS+LQ +VA+S A KEA+WLKG +E+ H V SDSQSAI L KN Sbjct: 1214 WKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKN 1273 Query: 924 PVFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLVSFQKILN 751 V H+RTKHI++R HFIRDI+ G++K KI T+ NPA++ TK +P+ K F+ LN Sbjct: 1274 SVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAK---FEGALN 1328 >emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] Length = 1334 Score = 938 bits (2425), Expect = 0.0 Identities = 526/1243 (42%), Positives = 745/1243 (59%), Gaps = 15/1243 (1%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNI-DDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVV 4285 I ++ID F K++ D++ + I D+ A LL+++P+SY + YGR ++TL+ V Sbjct: 120 IQDHIDTFNKIILDLEGVENVKICDEDKAFFLLSSLPKSYEGFVDTMLYGRTTLTLEDVK 179 Query: 4284 NALKSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXX 4105 +L SKE + K+C + S+ + AR Sbjct: 180 ASLSSKEIQ-KNCELETSNGEGLMARTEKKKDQK--------NKNQGKGHGKNQETADKK 230 Query: 4104 XXXXKCYSCGEPGHYAKDCSXXXXXXNEH----ANVASNGENFGEMYVVTDVSDMPXXXX 3937 KC+ C + GHY +DC ++ A VAS+ + G Y D+ Sbjct: 231 KKKRKCFYCRKEGHYIRDCFEKKKKESQEKSGDAAVASDDGSDG--YQSADL------LV 282 Query: 3936 XXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMG----EICL 3769 +DSGCSFH+ P + LF YE V G V + N CN++G+ CL Sbjct: 283 ASNSNTKGQWVIDSGCSFHLCPEKTLFYKYEAVDGGRVLMGNNNVCNIVGIWFCKRSRCL 342 Query: 3768 KFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNN 3589 + +L VRH P L NL+S L+ +G K G +++ KG+ +V K +N Sbjct: 343 MEL---LRSLHEVRHAPRLKRNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENG 399 Query: 3588 LYICHAESV--LDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPF 3415 LY+ SV + V+ V+ ++D+T LWH RLGHMS KGL+ L K G+ G D++ + F Sbjct: 400 LYVLQGSSVPVQEGVSAVS--EEDRTKLWHLRLGHMSIKGLQELSKQGLLGGDRIQQLEF 457 Query: 3414 CDSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSR 3235 C++C+ GK H +F + +MSK VL+Y H D WG + VPS G RYF+S+IDDYSR Sbjct: 458 CENCIFGKSHRSKF--NKGEHMSK--QVLDYAHIDHWGPAQVPSLSGGRYFMSLIDDYSR 513 Query: 3234 KVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRH 3055 KVW ++LK K L++F+ WK+L+ENQ+ K+K LRTDNGLEFC+K+ ++ C K+GIKRH Sbjct: 514 KVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRH 573 Query: 3054 KTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGK 2875 KTV +TPQQNG+ ERMNRTL++K RC+ + L + FW EA++TA+YLVNRSPS + K Sbjct: 574 KTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFK 633 Query: 2874 CPEHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPG 2695 PE +++GK + NL+VFGC A++H KLE R+ K VF+GYP+GVKGY++W + Sbjct: 634 TPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQG- 692 Query: 2694 FKVVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDV 2515 K +VSRDV+F+ES L S D + + + VE L D ++ Sbjct: 693 -KCIVSRDVVFHESVL--LKESAEHDAGLQDNPAANKRSGSETSKVNVELL--TDKSSEK 747 Query: 2514 HAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMS 2335 A +D DE E V + NYQL RDR RR V+ P ++ + Sbjct: 748 EAASD--------DERATAESEEHEVSELPQADLQNYQLARDRVRREVRAPVRYGYADLI 799 Query: 2334 FFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVD 2155 +A + + EP ++ EA++S + +WL AM+ EM SL N+TW L+P P + +++ Sbjct: 800 AYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLIN 859 Query: 2154 CKWLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFN 1984 CKW+FK + E ++KARLVA+GFTQ+EG+D+ EIF+PVVK +++RI+LA+VA + Sbjct: 860 CKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLD 919 Query: 1983 WELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFD 1804 EL+QMDV TAFLHG+L++ I M QPEGF ++VCLL K+LYGLKQSPRQW RFD Sbjct: 920 LELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFD 979 Query: 1803 KCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKM 1624 M S ++RS YD C+YF D +LL+YVDDML+ S I+ ++N L F+M Sbjct: 980 DFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASKYKSEIERLKNLLKAEFEM 1039 Query: 1623 KDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQ 1444 KDLG+A++ILGM+I+R+R TL L+Q Y++K+L +F M + KPV PL F LS Sbjct: 1040 KDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPVQTPLGPQFKLSAAT 1099 Query: 1443 SPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLL 1264 + +++S+MN + PY+ A+GS+MY M+CTR DIAY VS++SRY+S PG HW A+KW++ Sbjct: 1100 TSEDESQMN---EFPYAQAVGSLMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAVKWIM 1156 Query: 1263 RYLKSTMNVGLHFSKC-SDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQ 1087 RYLK + GL + K SD ++++G+VDS+ A D D RKST+ Y+F L ISWKS LQ Sbjct: 1157 RYLKGSSTCGLLYGKTKSDKIEVMGFVDSDFAGDLDRRKSTSRYMFVLNSCLISWKSSLQ 1216 Query: 1086 GIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDR 907 ALS A KEA+WL+GLL+E+ K VF D+Q+AI L KN ++H+R Sbjct: 1217 SGGALSSTEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVFCDNQNAIHLVKNQMYHER 1276 Query: 906 TKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 TKHI+V+ FIRD V KG V KIHT VNPAD TK LP K Sbjct: 1277 TKHIDVKLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTAK 1319 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 929 bits (2400), Expect = 0.0 Identities = 511/1238 (41%), Positives = 733/1238 (59%), Gaps = 12/1238 (0%) Frame = -1 Query: 4455 ENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNAL 4276 +++ F +++ D++S K ++ ++LL ++P SY + + I Y RD++TL V +AL Sbjct: 326 DHLSAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDAL 385 Query: 4275 KSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXX 4096 KE+ K S+ + A G Sbjct: 386 HVKEKMKKMVPSEGSNSQ---AEG--LIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRY 440 Query: 4095 XKCYSCGEPGHYAKDCSXXXXXXNEHANVASNG--ENFGEMYVVTDV-SDMPXXXXXXXX 3925 C C GH +C G E G+ VVTD SD Sbjct: 441 KSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGC 500 Query: 3924 XXXXXXXV-DSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGNV 3748 + ++ C +HM P R+ F+ YE V+ G V + ++ C V G+G + +K G + Sbjct: 501 AQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCI 560 Query: 3747 FTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAE-KQNNLYICHA 3571 TL +VRH+P+L +L+S L+ G + G G++K+ KGSLVV KA+ K NLY Sbjct: 561 RTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 620 Query: 3570 ESVLDNVNCVNSV--QDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVL 3397 ++L NV V+ D T+LWH RLGHM+ GL L K G+ + + FC+ C+ Sbjct: 621 TTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIF 680 Query: 3396 GKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFL 3217 GK V+F S+ +L+Y+H+D+WG + S GG RY ++++DDYSRKVW + Sbjct: 681 GKHKRVKFNTST----HTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYF 736 Query: 3216 LKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYT 3037 LK+K D F++WKT++E QT +K+K LRTDNG+EFC+K+ C GI RH TVP+T Sbjct: 737 LKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHT 796 Query: 3036 PQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVF 2857 PQQNGV ERMNRT++ K RCL GL K+FW EA+ TA YL+NRSPS + K P V+ Sbjct: 797 PQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVW 856 Query: 2856 SGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVS 2677 SG + S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW KVV+S Sbjct: 857 SGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVIS 914 Query: 2676 RDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAENDY 2497 R+V+F+E SV + S P E ++ + +VE L ++ HA Sbjct: 915 RNVVFHE--------SVMLHDKPSTNVPVESQEKASV---QVEHL-----ISSGHAPEKE 958 Query: 2496 ELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKF-NEFQMSFFAFN 2320 ++ + N DE + E + + + + +DR +R +KPP+++ E + +A + Sbjct: 959 DVAI-NQDEPVI-----EDSNSSIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALS 1012 Query: 2319 VFESLD-NSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCKWL 2143 V E ++ N+EP++Y EAI S++ W+ AM EM SL N TW LV P + CKW+ Sbjct: 1013 VAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWI 1072 Query: 2142 FKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWELK 1972 FK K ++ R+KARL+AKG++Q GID+ ++F+PVVK +++R +L++VA ++EL+ Sbjct: 1073 FKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELE 1132 Query: 1971 QMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKCMQ 1792 QMDV TAFLHG+L++ IYM+QP+GFV N VC LKK+LYGLKQSPRQW RFD M Sbjct: 1133 QMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFML 1192 Query: 1791 SLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKDLG 1612 S KF+RS YD C+Y K VD I+LL+YVDDML+ + I ++ L F+MKDLG Sbjct: 1193 SQKFRRSNYDSCVYLKVVDGSA-IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLG 1251 Query: 1611 DARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQSPKN 1432 A+KILGM I R R L L+Q Y+EK+L +F+M +AKPV+ PLA+HF LS + P++ Sbjct: 1252 AAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQS 1311 Query: 1431 DSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLRYLK 1252 D ++ M +VPYS+A+GS+MY M+C+RPD+++ +S++SRYM+NPG HW+A++W+ RYL+ Sbjct: 1312 DYDIEYMSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLR 1371 Query: 1251 STMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGIVAL 1072 T + L F + DG LVGYVDS+ A D D +S YVFT+ G +SWK+ LQ VAL Sbjct: 1372 GTSSACLQFGRSRDG--LVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVAL 1429 Query: 1071 SXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTKHIE 892 S A KEAIWL+GL + +C + +F DSQSAI L K+ +FH+RTKHI+ Sbjct: 1430 STTEAEYMAISEACKEAIWLRGLYTVLCAVTSCINIFCDSQSAICLTKDQMFHERTKHID 1489 Query: 891 VRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 VR+HFIR ++ +G VK KI NPADM TK +P K Sbjct: 1490 VRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVPATK 1527 >gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 927 bits (2396), Expect = 0.0 Identities = 514/1248 (41%), Positives = 733/1248 (58%), Gaps = 27/1248 (2%) Frame = -1 Query: 4440 FTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNALKSKER 4261 F K++ D+ S K D+ ++LL ++P SY + + I RD +TL V +AL++KE+ Sbjct: 122 FKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEK 181 Query: 4260 -ELKHCNIGKSSER--VMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXXXK 4090 ++ N G SS + +H RGR Sbjct: 182 MKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR----------GRSKSKPPGNKKF 231 Query: 4089 CYSCGEPGHYAKDCSXXXXXXNEH--------ANVASNGENFGEMYVVTDVSDMPXXXXX 3934 C C H +C ++ A+ A++ ++ G+ VV Sbjct: 232 CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVV----------FA 281 Query: 3933 XXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHG-YVSLANEKKCNVLGMGEICLKFAS 3757 +DS CSFH+ RN FS+Y+ V+ G V + ++ C ++G+G + +K Sbjct: 282 GCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDD 341 Query: 3756 GNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQN-NLYI 3580 G TLKNVR++P + NL+S + L+ G + GV+K+ KGSLV K + + LY+ Sbjct: 342 GMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYV 401 Query: 3579 CHAESVLDNVNCVNSVQDD---KTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCD 3409 ++ + + +V +D KT+LWH RLGHMS+ G+ L K + S + FC+ Sbjct: 402 LRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCE 461 Query: 3408 SCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKV 3229 C+ GK VQF S + L+Y+HAD+WG S PS GG RY L+VIDDYSRKV Sbjct: 462 HCIFGKHKRVQFNTS----VHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKV 517 Query: 3228 WTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKT 3049 W + LK+K D F+ WK +IE QT +K+K LRTDNG EFC+ +D C + GI RH T Sbjct: 518 WPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577 Query: 3048 VPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCP 2869 +P+TPQQNGV ERMNRT++ + RC+ ++KRFW EA TA YL+NRSPS+PL K P Sbjct: 578 IPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTP 637 Query: 2868 EHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFK 2689 V+SG D S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW+ K Sbjct: 638 IEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETG--K 695 Query: 2688 VVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHA 2509 +SR V+FNE SV +NS PSE ++ + Q+ +D V Sbjct: 696 TFMSRSVVFNE--------SVMFTNS----LPSEHVPEKELQRMHM-QVEHVDDDTGVQV 742 Query: 2508 ENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRD------RSRRVVKPPEK-FN 2350 E +E +N+D + + HDDV QL + +S+R KPP++ Sbjct: 743 EPVHEQDDHNND------VADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIE 796 Query: 2349 EFQMSFFAFNVFESLDN-SEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPD 2173 E +S++A + E ++N EP +Y+EA++ +S W++AM EM SL N TW +VP P Sbjct: 797 ECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPK 856 Query: 2172 SISVVDCKWLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLA 2002 + CKW+FK K +E ++KARLVA+G++Q G+DY ++F+PVVK +++R L+ Sbjct: 857 KKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLS 916 Query: 2001 LVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQ 1822 +VA + EL+Q+DV TAFLHG+L++ IYM QPEGF+ +VC LK++LYGLKQSPRQ Sbjct: 917 IVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQ 976 Query: 1821 WNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCL 1642 WN RFD M S FKRS YD C+Y K V+ PI+LL+YVDDML+ + I ++ L Sbjct: 977 WNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS-PIYLLLYVDDMLIAAKSKIEITKLKKLL 1035 Query: 1641 CDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHF 1462 F MKDLG A+KILGM I R+RK L L+Q +Y++K+L +F+M NAK V+ P+A HF Sbjct: 1036 SSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHF 1095 Query: 1461 VLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWE 1282 LS Q P D+E+ M +VPYS+A+GS+MY M+C+RPD++Y +S++SRYMSNPG HW Sbjct: 1096 KLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWR 1155 Query: 1281 ALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISW 1102 A++W+ RYL+ T L F + G L+GYVDS+ A D D R+S T YVFT+ +SW Sbjct: 1156 AVQWIFRYLRGTTYSCLKFGRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213 Query: 1101 KSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNP 922 ++ LQ +VALS A KE IWLKGL +E+ ++ + DSQSAI L K+ Sbjct: 1214 RATLQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQ 1273 Query: 921 VFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 +FH+RTKHI++++HF+RD++++G +K KI T NPADM TK +PV K Sbjct: 1274 MFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAK 1321 >emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] Length = 1335 Score = 926 bits (2394), Expect = 0.0 Identities = 514/1245 (41%), Positives = 722/1245 (57%), Gaps = 20/1245 (1%) Frame = -1 Query: 4452 NIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNALK 4273 +I F K++ D+ S K D+ ++LL ++P SY + + I RD +TL V +AL+ Sbjct: 120 HIAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQ 179 Query: 4272 SKER-ELKHCNIGKSSER--VMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXX 4102 +KE+ ++ N G SS + +H RGR Sbjct: 180 NKEKMKIMVQNDGSSSSKGEALHVRGRTENKTSNEKNYDRR----------GRSKSKPPG 229 Query: 4101 XXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDMPXXXXXXXXX 3922 C C H +C E N + V D S Sbjct: 230 NKKFCVYCKLKNHNIDECKKVQAK--ERKNKKDGKVSVASAAVSDDDSGDCLVVFAGCVA 287 Query: 3921 XXXXXXVDSGCSFHMSPFRNLFSNYEEVKHG-YVSLANEKKCNVLGMGEICLKFASGNVF 3745 +DS CSFH+ RN FS+Y+ V+ G V + ++ C ++G+G + +K G Sbjct: 288 GHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTR 347 Query: 3744 TLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQN-NLYICHAE 3568 TLKNVR++P + NL+S + L+ G + GV+K+ KGSLV K + + LY+ Sbjct: 348 TLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGC 407 Query: 3567 SVLDNVNCVNSVQDD---KTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVL 3397 ++ + + +V +D KT+LWH RLGHMS+ G+ L K + S + FC+ C+ Sbjct: 408 TLPGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGYTSSKIKFCEHCIF 467 Query: 3396 GKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFL 3217 GK VQF S + L+Y+HAD+WG S PS GG RY L++IDDYSRKVW + Sbjct: 468 GKHKRVQFNTS----VHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYF 523 Query: 3216 LKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYT 3037 LK+K D F+ WK +IE QT +K+K L TDNG EFC+ +D C + GI RH T+P+T Sbjct: 524 LKHKDDTFTAFKNWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHT 583 Query: 3036 PQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVF 2857 PQQNGV ERMNRT++ + RC+ ++KRFW EA TA YL+NRSPS+PL K P V+ Sbjct: 584 PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVW 643 Query: 2856 SGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVS 2677 SG D S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW+ K +S Sbjct: 644 SGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETG--KTFMS 701 Query: 2676 RDVIFNES-EFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAEND 2500 R V+FNES F S + +VE D +VE + E D N+ A++D Sbjct: 702 RSVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDDTGVQVEPVDEQDDHNNDVADDD 761 Query: 2499 YELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRD------RSRRVVKPPEK-FNEFQ 2341 HDDV QL D +S+R KPP++ E Sbjct: 762 --------------------AHDDVQQTPPILQLEEDLSIAQRKSKRTTKPPKRLIEECN 801 Query: 2340 MSFFAFNVFESLDN-SEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSIS 2164 +S++A + E ++N EP +Y+EA++ +S W++AM EM SL N TW +VP P Sbjct: 802 LSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKK 861 Query: 2163 VVDCKWLFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVA 1993 + CKW+FK K +E ++KARLVA+G++Q G+DY ++F+PVVK +++R L++VA Sbjct: 862 TISCKWIFKRKEALSLSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVA 921 Query: 1992 QFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNI 1813 + EL+Q+DV TAFLHG+L++ IYM QPEGF+ +VC LK++LYGLKQSPRQWN Sbjct: 922 SHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNK 981 Query: 1812 RFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDN 1633 RFD M S FKRS YD C+Y K V+ PI+LL+YVDDML+ + I ++ L Sbjct: 982 RFDSFMLSHSFKRSKYDSCVYIKHVNGS-PIYLLLYVDDMLIAAKSKIEITKLKKLLSSE 1040 Query: 1632 FKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLS 1453 F MKDLG A+KILGM I R+RK L L+Q +Y++K+L +F+M NAK V+ P+A HF LS Sbjct: 1041 FDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLS 1100 Query: 1452 KEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALK 1273 Q P D+E+ M +VPYS+A+GS+MY M+C+RPD++Y +S++SRYMSNPG HW AL+ Sbjct: 1101 AAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQ 1160 Query: 1272 WLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQ 1093 W+ RYL+ T L F + G L+GYVDS+ A D D R+S T YVFT+ +SW++ Sbjct: 1161 WIFRYLRGTTYSCLKFGRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRAT 1218 Query: 1092 LQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFH 913 LQ +VALS A KE IWLKGL +E+ ++ + DSQSAI L K+ +FH Sbjct: 1219 LQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFH 1278 Query: 912 DRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 +RTKHI++++HF+RD++++G +K KI T NPADM TK +PV K Sbjct: 1279 ERTKHIDIKYHFVRDVIEEGKLKVCKICTHDNPADMMTKPIPVAK 1323 >gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 924 bits (2388), Expect = 0.0 Identities = 511/1248 (40%), Positives = 731/1248 (58%), Gaps = 27/1248 (2%) Frame = -1 Query: 4440 FTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNALKSKER 4261 F K++ D+ S K D+ ++LL ++P SY + + I RD +TL V +AL++KE+ Sbjct: 122 FKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEK 181 Query: 4260 -ELKHCNIGKSSER--VMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXXXK 4090 ++ N G SS + +H RGR Sbjct: 182 MKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR----------GRSKSKPPGNKKF 231 Query: 4089 CYSCGEPGHYAKDCSXXXXXXNEH--------ANVASNGENFGEMYVVTDVSDMPXXXXX 3934 C C H +C ++ A+ A++ ++ G+ VV Sbjct: 232 CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVV----------FA 281 Query: 3933 XXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHG-YVSLANEKKCNVLGMGEICLKFAS 3757 +DS CSFH+ RN FS+Y+ V+ G V + ++ C ++G+G + +K Sbjct: 282 GCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDD 341 Query: 3756 GNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQN-NLYI 3580 G TLKNVR++P + NL+S + L+ G + GV+K+ KGSLV K + + LY+ Sbjct: 342 GMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYV 401 Query: 3579 CHAESVLDNVNCVNSVQDD---KTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCD 3409 ++ + + +V +D KT+LWH RLGHMS+ G+ L K + S + FC+ Sbjct: 402 LRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCE 461 Query: 3408 SCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKV 3229 C+ GK VQF S + L+Y+HAD+WG S PS GG RY L++IDDYSRKV Sbjct: 462 HCIFGKHKRVQFNTS----VHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKV 517 Query: 3228 WTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKT 3049 W + LK+K D F+ WK +IE QT +K+K LRTDNG EFC+ +D C + GI RH T Sbjct: 518 WPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577 Query: 3048 VPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCP 2869 +P+TPQQNGV ERMNRT++ + RC+ ++KRFW EA TA YL+NRSPS+PL K P Sbjct: 578 IPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTP 637 Query: 2868 EHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFK 2689 V+SG D S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW+ K Sbjct: 638 IEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETG--K 695 Query: 2688 VVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHA 2509 +SR V+FNE SV +NS PSE ++ + Q+ +D V Sbjct: 696 TFMSRSVVFNE--------SVMFTNS----LPSEHVPEKELQRMHM-QVEHVDDYTGVQV 742 Query: 2508 ENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRD------RSRRVVKPPEK-FN 2350 E +E +N+D + + HDDV QL + +S+R KPP++ Sbjct: 743 EPVHEQDDHNND------VADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIE 796 Query: 2349 EFQMSFFAFNVFESLDN-SEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPD 2173 E +S++A + E ++N EP +Y+EA++ +S W++AM EM SL N TW +VP P Sbjct: 797 ECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPK 856 Query: 2172 SISVVDCKWLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLA 2002 + CKW+FK K +E ++KARLVA+G++Q G+DY ++F+PVVK +++R L+ Sbjct: 857 KKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLS 916 Query: 2001 LVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQ 1822 +VA + EL+Q+DV TAFLHG+L++ IYM QPEGF+ +VC LK++LYGLKQSPRQ Sbjct: 917 IVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQ 976 Query: 1821 WNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCL 1642 WN RFD M S FKRS YD C+Y K V+ PI+LL+YVDDML+ + I ++ L Sbjct: 977 WNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS-PIYLLLYVDDMLIAAKSKIEITKLKKLL 1035 Query: 1641 CDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHF 1462 F MKDLG A+KIL M I R+RK L L+Q +Y++K+L +F+M NAK V+ P+A HF Sbjct: 1036 SSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHF 1095 Query: 1461 VLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWE 1282 LS Q P D+E+ M +VPYS+A+GS+MY M+C+RPD++Y +S++SRYMSNPG HW Sbjct: 1096 KLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWR 1155 Query: 1281 ALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISW 1102 ++W+ RYL+ T L F + G L+GYVDS+ A D D R+S T YVFT+ +SW Sbjct: 1156 VVQWIFRYLRGTTYSCLKFGRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213 Query: 1101 KSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNP 922 ++ LQ +VALS A KE IWLKGL +E+ ++ + DSQSAI L K+ Sbjct: 1214 RATLQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQ 1273 Query: 921 VFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 +FH+RTKHI++++HF+RD++++G +K KI T NPADM TK +PV K Sbjct: 1274 MFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAK 1321 >gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana] Length = 1356 Score = 924 bits (2387), Expect = 0.0 Identities = 510/1252 (40%), Positives = 732/1252 (58%), Gaps = 16/1252 (1%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVN 4282 ID+N+D F +++ ++ S + ++ A+++LN++P S+ LK ++YG ++T+ V + Sbjct: 141 IDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLKHTLKYGNKTLTVQDVTS 200 Query: 4281 ALKSKERELKHC-NIGKSSERVMHA--RGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXX 4111 + KS EREL ++ K V++ RGRP Sbjct: 201 SAKSLERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKGGQGKGRSRSNSKTKVP----- 255 Query: 4110 XXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDMPXXXXXX 3931 C+ C + GH KDC + + S G+ GE V+T+ Sbjct: 256 -------CWYCKKEGHVKKDC------YSRKKKMESEGQ--GEAGVITEKLVFSEALSVN 300 Query: 3930 XXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGN 3751 +DSGC+ HM+ R+ F +++E + + L ++ G G I + G Sbjct: 301 EQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGT 360 Query: 3750 VFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICHA 3571 + L+NV++VP L NL+S L+ +G + G+G ++ K + + N LY+ Sbjct: 361 IKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNGLYVLDG 420 Query: 3570 ESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLGK 3391 +V+ + C KT+LWH RLGHMS L++L G+ + +++ + FC+ CV+GK Sbjct: 421 STVMSEL-CNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELEFCEHCVMGK 479 Query: 3390 QHHVQFPISSVPNMSKCTS--VLEYLHADVWGHSSV-PSHGGNRYFLSVIDDYSRKVWTF 3220 V F N+ K TS L Y+HAD+WG +V PS G +YFLS+IDD +RKVW + Sbjct: 480 SKKVSF------NVGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLY 533 Query: 3219 LLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPY 3040 LK+K + D+F +WK+L+ENQ KK+K LRTDNGLEFCN D C ++GI+RH+T Y Sbjct: 534 FLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTY 593 Query: 3039 TPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHV 2860 TPQQNGV ERMNRT++EKVRCL G+ + FW EA TA YL+NRSP+ + PE + Sbjct: 594 TPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEM 653 Query: 2859 FSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVV 2680 + + P +L+ FG A+VHQ KL+PR+ K FLGYP G KGY++W + K V+ Sbjct: 654 WLNRKPGYKHLRKFGSIAYVHQDQGKLKPRALKGFFLGYPAGTKGYKVW--LLEEEKCVI 711 Query: 2679 SRDVIFNESEF--PCLTASVSTSN-SKSDIAPSEVEQSPDIAPSE----VEQLPEMDPLN 2521 SR+V+F ES T N ++ + SEVEQ+ S ++ + +P+ Sbjct: 712 SRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPIT 771 Query: 2520 DVHAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQ 2341 + G + D E +E +T G + Y+L RDR RR + PP +F E Sbjct: 772 E---------GEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEES 822 Query: 2340 MSFFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISV 2161 FA V E+ EP SY+EA++S++ +W A EM+SL N TW LV KP + Sbjct: 823 SVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKI 882 Query: 2160 VDCKWLFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQ 1990 + C+WLFK+K E TRFKARLVAKG+TQ+EG+DY EIFAPVVK ++RI+++LV Sbjct: 883 IGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVD 942 Query: 1989 FNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIR 1810 + EL+QMDV T FLHGDL++ +YM+QPEGFV + N VC LKK+LYGLKQSPRQWN R Sbjct: 943 KDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKR 1002 Query: 1809 FDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNF 1630 FD+ M S +F RS +D C+Y K V I+LL+YVDDML+ I V+ L F Sbjct: 1003 FDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEF 1062 Query: 1629 KMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSK 1450 +MKD+G A +ILG++I R+RK L L+Q Y+ K+L +F+MS AK N P+ +HF L+ Sbjct: 1063 EMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLA- 1121 Query: 1449 EQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKW 1270 + + + E VPYS+A+GS+MY M+ TRPD+AY + ++SRYMS PG HWEA+KW Sbjct: 1122 --AVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKW 1179 Query: 1269 LLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQL 1090 ++RYLK ++ L F+K D + GY DSN A D D R+S + YVFT+ G+ +SWK+ L Sbjct: 1180 VMRYLKGAQDLNLVFTKEKD-FTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASL 1238 Query: 1089 QGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHD 910 Q +VA+S A KEA+W+KGLL ++ ++ DSQSAI L KN V+H+ Sbjct: 1239 QPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHE 1298 Query: 909 RTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLVSFQKIL 754 RTKHI+VRF++IRD+V+ G V KIHT NP D TKC+PV K S +L Sbjct: 1299 RTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVL 1350 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 912 bits (2358), Expect = 0.0 Identities = 505/1242 (40%), Positives = 735/1242 (59%), Gaps = 7/1242 (0%) Frame = -1 Query: 4455 ENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNAL 4276 E+++ LL ++++ K D+ +A++LL ++P S+ + + G+D+++L+ V +AL Sbjct: 117 EHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSAL 176 Query: 4275 KSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXX 4096 S REL+H G S++ + Sbjct: 177 HS--RELRHKANGTSTD------------IQPSGLFTSSRKGRKNGGKKNKPMSKGAKPD 222 Query: 4095 XKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDMPXXXXXXXXXXX 3916 C C E GH+ DC + + A+ E T+ + Sbjct: 223 DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEED------TNSEEDIALVADEHTHHS 276 Query: 3915 XXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGNVFTLK 3736 +DSG S+H+ P R F+ YE+V G +S+AN C V+G G I ++ G+ TL Sbjct: 277 DVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLN 336 Query: 3735 NVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICHAESVLD 3556 VRHVP + NL+S + L+ G GV+++ KGS ++ K + LY +V Sbjct: 337 EVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTG 396 Query: 3555 NVNCVNSV--QDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLGKQHH 3382 + + +S Q D T LWH RLGHM +G++IL K + K+ S+ FC+ CV GK H Sbjct: 397 SAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHR 456 Query: 3381 VQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFLLKNKS 3202 +FP + + + L+Y+H+D WG V S GG R+F+S+IDDYSR W +++K+KS Sbjct: 457 NKFPKA----IHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKS 512 Query: 3201 DVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYTPQQNG 3022 + +F++WK L+ENQTGKKIK LRTDNGLEFC D C GI RH+TV TPQQNG Sbjct: 513 EAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNG 572 Query: 3021 VTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVFSGKLP 2842 V ERMN+TLLE+ RC+ GL +RFW EA+ TA YL+NR P +Q K P ++SGK Sbjct: 573 VAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAA 632 Query: 2841 DLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVSRDVIF 2662 D SNLK FGC A+ H KLEPR++K VF+GY +GVKG+R+W + +V++SR+V+F Sbjct: 633 DYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEK--RVIMSRNVVF 690 Query: 2661 NESEFPCLTASVS-TSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAENDYELGV 2485 +ES P L V T+ S++ +VE S++++ E D + E D Sbjct: 691 DES--PLLRTIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEED--QEPQTETDIP--- 743 Query: 2484 NNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRV-VKPPEKFNEFQMSFFAFNVFES 2308 E++ D+ + + +DR RRV V+PP ++ M +A V E Sbjct: 744 -------------ESMPSDI-----HQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEE 785 Query: 2307 LDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCKWLFKVKH 2128 +D SEP++Y+EAI S +S +W AM EM SLH N+TW LV +P ++ CKW+FK K Sbjct: 786 VDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKE 845 Query: 2127 ---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWELKQMDVT 1957 AE ++KAR+VA+GF Q+EG+DY EIF+PVV+ T++R++LA+VA N EL+Q+DV Sbjct: 846 GISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVK 905 Query: 1956 TAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKCMQSLKFK 1777 TAFLHG+L++ IYM QP+GF NHVC LKK+LYGLKQSPRQW RFD M L + Sbjct: 906 TAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYT 965 Query: 1776 RSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKDLGDARKI 1597 RS YD C+Y+ ++ I+L++YVDDML+ + I+ ++ L F+MKDLG ARKI Sbjct: 966 RSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKI 1025 Query: 1596 LGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQSPKNDSEMN 1417 LGM I+R+R++ L L+Q SY++K+L++F MS++KP++ P A++ L+ +P+++ E Sbjct: 1026 LGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKE 1085 Query: 1416 AMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLRYLKSTMNV 1237 M +VPY++A+GS+MY M+CTRPD+A+ VS++SR+M PG HW+A+K + RYL+ T +V Sbjct: 1086 YMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDV 1145 Query: 1236 GLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGIVALSXXXX 1057 GL + + L + GY DS+ A D D R+S T YVFTL GS +SWK+ LQ V LS Sbjct: 1146 GLIYGGDTQCL-VTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEA 1204 Query: 1056 XXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTKHIEVRFHF 877 A KE IWLKGL+S++ A V+ DS SAI L K+ V H+RTKHI+VR+HF Sbjct: 1205 EYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHF 1264 Query: 876 IRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLVSFQKILN 751 +R + +K +K+ T NPADM TK +P K +LN Sbjct: 1265 LR---SEKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLN 1303 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 910 bits (2352), Expect = 0.0 Identities = 504/1240 (40%), Positives = 726/1240 (58%), Gaps = 14/1240 (1%) Frame = -1 Query: 4455 ENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNAL 4276 +++ F +++ D++S K ++ ++LL ++P SY + + I Y RD++TL V +AL Sbjct: 28 DHLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDAL 87 Query: 4275 KSKERELKHCNIGKSSERV--MHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXX 4102 +KE+ K S+ + + RGR + Sbjct: 88 HAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKS--- 144 Query: 4101 XXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNG--ENFGEMYVVTDV-SDMPXXXXXX 3931 C C GH +C G E G+ VVTD SD Sbjct: 145 ----CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYA 200 Query: 3930 XXXXXXXXXV-DSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASG 3754 + D+ C++HM P R+ F+ YE V+ G V + ++ C V G+G + +K G Sbjct: 201 GCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 260 Query: 3753 NVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAE-KQNNLYIC 3577 + TL +VRH+P+L +L+S L+ G + G G++K+ KGSLVV KA+ K NLY Sbjct: 261 CIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHL 320 Query: 3576 HAESVLDNVNCVNSV--QDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSC 3403 ++L NV V+ D T+LWH RLGHMS GL L K G+ + + FC+ C Sbjct: 321 RGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHC 380 Query: 3402 VLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWT 3223 + GK V+F S+ +L+Y+H+D+WG + S GG RY ++++DDYSRKVW Sbjct: 381 IFGKHKRVKFNTST----HTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWP 436 Query: 3222 FLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVP 3043 + LK+K D F++WKT++E QT +K+K LRTDNG+E C+K+ C GI RH TVP Sbjct: 437 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVP 496 Query: 3042 YTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEH 2863 +TPQQNGV ERMNRT++ K RC+ L K+FW EA+ TA YL+NRSPS + K P Sbjct: 497 HTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 556 Query: 2862 VFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVV 2683 V+SG + S+L+VFGC A+ H KLEPR KC+FLGY GVKGY+LW KVV Sbjct: 557 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETK--KVV 614 Query: 2682 VSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAEN 2503 +SR+V+F+E S+ + S P E ++ + +VE L ++ HA Sbjct: 615 ISRNVVFHE--------SIMLHDKPSTNVPVESQEKVSV---QVEHL-----ISSGHAPE 658 Query: 2502 DYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKF-NEFQMSFFA 2326 ++ +N E + + + +DR +R KPP ++ E + +A Sbjct: 659 KEDVAINQDAPV------IEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYA 712 Query: 2325 FNVFESLD-NSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCK 2149 +V E ++ N+EP++Y +AI S++ W+ AM EM SL N +W L P + CK Sbjct: 713 LSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCK 772 Query: 2148 WLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWE 1978 W+FK K ++ R+KARLVAKG++Q GID+ ++F+PVVK +++R +L++VA ++E Sbjct: 773 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYE 832 Query: 1977 LKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKC 1798 L+QMDV TAFLHG+L++ IYM+QPEGFV N VC LKK+LYGLKQSPRQW RFD Sbjct: 833 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 892 Query: 1797 MQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKD 1618 M S KF+RS YD C+Y K VD I+LL+YVDDML+ + I ++ L F+MKD Sbjct: 893 MLSQKFRRSNYDSCVYLKVVDGSA-IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKD 951 Query: 1617 LGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQSP 1438 LG A+KILGM I R R L L+Q Y+EK+L +F+M +AK V+ LA+HF LS + P Sbjct: 952 LGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCP 1011 Query: 1437 KNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLRY 1258 ++ ++ M +VPYS+A+ S+MY M+C+RPD+++ +S++SRYM+NPG HW+A++W+ RY Sbjct: 1012 QSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRY 1071 Query: 1257 LKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGIV 1078 L+ T + L F + SDG LVGYVDS+ A D D R+S T YVFT+ G +SWK+ LQ V Sbjct: 1072 LRGTSSACLQFGRSSDG--LVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATV 1129 Query: 1077 ALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTKH 898 ALS A KE IWL+GL +E+C + +F DSQSAI L K+ +FH+RTKH Sbjct: 1130 ALSTTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKH 1189 Query: 897 IEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 I++R+HFIR ++ +G VK KI T NP DM TK +P K Sbjct: 1190 IDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATK 1229 >gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77549942|gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1373 Score = 901 bits (2329), Expect = 0.0 Identities = 496/1222 (40%), Positives = 716/1222 (58%), Gaps = 27/1222 (2%) Frame = -1 Query: 4440 FTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNALKSKER 4261 F K++ D+ S K D+ ++LL ++P SY + + I RD +TL V +AL++KE+ Sbjct: 122 FKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEK 181 Query: 4260 -ELKHCNIGKSSER--VMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXXXK 4090 ++ N G SS + +H RGR Sbjct: 182 MKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRR----------GRSKSKPPGNKKF 231 Query: 4089 CYSCGEPGHYAKDCSXXXXXXNEH--------ANVASNGENFGEMYVVTDVSDMPXXXXX 3934 C C H +C ++ A+ A++ ++ G+ VV Sbjct: 232 CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVV----------FA 281 Query: 3933 XXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHG-YVSLANEKKCNVLGMGEICLKFAS 3757 +DS CSFH+ RN FS+Y+ V+ G V + ++ C ++G+G + +K Sbjct: 282 GCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDD 341 Query: 3756 GNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQN-NLYI 3580 G TLKNVR++P + NL+S + L+ G + GV+K+ KGSLV K + + LY+ Sbjct: 342 GMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYV 401 Query: 3579 CHAESVLDNVNCVNSVQDD---KTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCD 3409 ++ + + ++ +D KT+LWH RLGHMS+ G+ L K + S + FC+ Sbjct: 402 LRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCE 461 Query: 3408 SCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKV 3229 C+ GK VQF S + L+Y+HAD+WG S PS GG RY L++IDDYSRKV Sbjct: 462 HCIFGKHKRVQFNTS----VHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKV 517 Query: 3228 WTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKT 3049 W + LK+K D F+ WK +IE QT +K+K LRTDNG EFC+ +D C + GI RH T Sbjct: 518 WPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577 Query: 3048 VPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCP 2869 +P+TPQQNGV ERMNRT++ + RC+ ++KRFW EA TA YL+NRSPS+PL K P Sbjct: 578 IPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTP 637 Query: 2868 EHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFK 2689 V+SG D S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW+ K Sbjct: 638 IEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETG--K 695 Query: 2688 VVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHA 2509 +SR V+FNE SV +NS PSE ++ + Q+ +D V Sbjct: 696 TFMSRSVVFNE--------SVMFTNS----LPSEHVPEKELQRMHM-QVEHVDDDTGVQV 742 Query: 2508 ENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRD------RSRRVVKPPEK-FN 2350 E +E +N+D + + HDDV QL + +S+R KPP++ Sbjct: 743 EPVHEQDDHNND------VADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIE 796 Query: 2349 EFQMSFFAFNVFESLDN-SEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPD 2173 E +S++A + E ++N EP +Y+EA++ +S W++AM EM SL N TW +VP P Sbjct: 797 ECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPK 856 Query: 2172 SISVVDCKWLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLA 2002 + CKW+FK K +E ++KARLVA+G++Q G+DY ++F+PVVK +++R L+ Sbjct: 857 KKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLS 916 Query: 2001 LVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQ 1822 +VA + EL+Q+DV TAFLHG+L++ IYM QPEGF+ +VC LK++LYGLKQSPRQ Sbjct: 917 IVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQ 976 Query: 1821 WNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCL 1642 WN RFD M S FKRS YD C+Y K V+ PI+LL+YVDDML+ + I ++ L Sbjct: 977 WNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS-PIYLLLYVDDMLIAAKSKIEITKLKKLL 1035 Query: 1641 CDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHF 1462 F MKDLG A+KILGM I R+RK L L+Q +Y++K+L +F+M NAK V+ P+A HF Sbjct: 1036 SSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHF 1095 Query: 1461 VLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWE 1282 LS Q P D+E+ M +VPYS+A+GS+MY M+C+RPD++Y +S++SRYMSNPG HW Sbjct: 1096 KLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWR 1155 Query: 1281 ALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISW 1102 A++W+ RYL+ T L F + G L+GYVDS+ A D D R+S T YVFT+ +SW Sbjct: 1156 AVQWIFRYLRGTTYSCLKFGRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213 Query: 1101 KSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNP 922 ++ LQ +VALS A KE IWLKGL +E+ ++ + DS+SAI L K+ Sbjct: 1214 RATLQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSESAIYLTKDQ 1273 Query: 921 VFHDRTKHIEVRFHFIRDIVDK 856 +FH+RTKHI++++HF+RD++++ Sbjct: 1274 MFHERTKHIDIKYHFVRDVIEE 1295 >gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] Length = 1297 Score = 886 bits (2289), Expect = 0.0 Identities = 506/1255 (40%), Positives = 721/1255 (57%), Gaps = 21/1255 (1%) Frame = -1 Query: 4479 LDMSKDIDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSIT 4300 ++ D++++I F + +++ G K D+ +AV+LL+++P + K + + ++ IT Sbjct: 86 MEEGDDLNDHICKFQNCIANLEKVGAKMDDEDTAVMLLHSLPPLFKHFKTTMIF-KELIT 144 Query: 4299 LDIVVNALKSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXX 4120 L V KS R + + S R ++ RG+ Sbjct: 145 LSKVCENPKSYIRLEREED--SSQARGLYVRGKERGRSRNRGGGFQGRGMSKSKGKGKGK 202 Query: 4119 XXXXXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENF--------GEMYVVTD 3964 C+ G P H+ ++C + + +S N GE+ ++ Sbjct: 203 KDG-------CFIYGSPDHWKRNCKQWKEKKAQMSGESSQLANVVIGYNDEDGELLAIST 255 Query: 3963 VSDMPXXXXXXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGM 3784 S P D+ C+FH R+ F Y+E V + N+ ++G+ Sbjct: 256 SSGAPRHWTL-----------DTACTFHTCAHRDWFDTYKEGNTRSVLMGNDSPSRIMGI 304 Query: 3783 GEICLKFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKA 3604 G + ++ G V L NVRH P L NL+S + ++ VG K GV+K+ KG +V K Sbjct: 305 GMVKIRMHDGIVRALGNVRHTPGLNRNLISLSTMDRVGFWHKGQNGVLKVGKGQMVYMKG 364 Query: 3603 EKQ-NNLYICHAESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLS 3427 Q +N+Y +V ++DKT LW RRLGHMS +GL+ L K + Sbjct: 365 AIQPDNMYKLTGSTVEGGAGVCT--EEDKTELWRRRLGHMSQRGLQELHKKEQLDGVMSA 422 Query: 3426 SVPFCDSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVID 3247 ++ FC C LGKQ V F +SS N SK VL+Y+H DVWG S+ S GG RYF+S ID Sbjct: 423 ALEFCRYCTLGKQTRVSFNLSSSENKSK--GVLDYIHTDVWGPSATISKGGARYFVSFID 480 Query: 3246 DYSRKVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYG 3067 D+SRKVW F +K K++V +F++WK + NQTG+KIK LR+DNG E+ +K +C G Sbjct: 481 DFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQLCKDEG 540 Query: 3066 IKRHKTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVP 2887 I RH TV +PQQNGV ERMNRTL+EK R +R GL + FW EA + A YL+NRSPS Sbjct: 541 ITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLPEEFWAEAANHACYLINRSPSRA 600 Query: 2886 LQGKCPEHVFSGKLPDLSNLKVFGCAAFVHQKGD---KLEPRSRKCVFLGYPEGVKGYRL 2716 + KC E V+SGK D SNL+VFGC+A+ H D KLEP+S +C+F+G+ +GVKGY+L Sbjct: 601 INFKCAEEVWSGKPVDYSNLRVFGCSAYAHIPKDERTKLEPKSLECLFIGFEKGVKGYKL 660 Query: 2715 WDRSVPGFKVVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSE--VEQSP----DIAPSE 2554 WD + K V+SRDV+F+E E ++S S +K +A SE VEQ+ ++A E Sbjct: 661 WD--IVNEKKVISRDVVFDERE------AISISLAKPSVADSEAQVEQNEQGNDEVAIEE 712 Query: 2553 VEQLPEMDPLNDVHAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRV 2374 E + P E + G N+ + + + D+ +R Sbjct: 713 PEH--QQQPTVMAQVEQSPQRGQNSPIPQA--------------PESFKRSIALDKPKRN 756 Query: 2373 VKPPEKFNEFQMSFFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTW 2194 KP ++F F+ S+ +P +Y +AI+S S W+ AM EM SLH N W Sbjct: 757 RKPIQRFG-FEPEEDVSRAL-SISQGDPTTYEDAIESVESAGWIGAMTEEMESLHKNSVW 814 Query: 2193 MLVPKPDSISVVDCKWLFKVK---HEAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFT 2023 LVPKP +V CKW+F+ K HE ++ +KARLVAKG++QKEG+DY EIF+PVVK T Sbjct: 815 ELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHT 874 Query: 2022 TVRIMLALVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYG 1843 ++R++L++ AQ++ E++QMDV TAFLHGDL++ IYM QPEGFV++ N VC LKK+LYG Sbjct: 875 SIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYG 934 Query: 1842 LKQSPRQWNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSI 1663 LKQSPRQW FD M + + R YD C+Y+ + I LL+YVDDML+ + I Sbjct: 935 LKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQI 994 Query: 1662 KHVQNCLCDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVN 1483 + ++ L F MKDLG A+KILG+ I R+R + L+Q Y+ KIL +F+M+ AK V+ Sbjct: 995 QKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAEAKVVS 1054 Query: 1482 VPLASHFVLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSN 1303 +PLA+HF LS EQ P + E++ MK VPY++A+G +MY MICTRPD+A +S++S+YMSN Sbjct: 1055 IPLAAHFRLSAEQRPSDQKEIDMMKNVPYASAVGCLMYAMICTRPDLAQAMSVVSKYMSN 1114 Query: 1302 PGMPHWEALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTL 1123 PG HWEA+KW+ +YLK+T +G+ F + + G+VDS+ A D D R+ST YVFT Sbjct: 1115 PGKRHWEAVKWIFKYLKNTRQLGIMFERRQGEACVAGFVDSDFAGDLDRRRSTAGYVFTC 1174 Query: 1122 CGSCISWKSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSA 943 G +SWK+ LQ + ALS A KEAIWL GL ++ + +V DSQSA Sbjct: 1175 GGGPVSWKATLQAVTALSTTEAEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDSQSA 1234 Query: 942 IQLCKNPVFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 I L KN VFH RTKHI+ R+H IRD V+ G++ EK+HTD N AD TK + V+K Sbjct: 1235 IHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIVEKVHTDDNAADFLTKPVSVEK 1289 >gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1356 Score = 881 bits (2276), Expect = 0.0 Identities = 500/1251 (39%), Positives = 713/1251 (56%), Gaps = 14/1251 (1%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEY--GRDSITLDIV 4288 ++ NID F +++ D+++ D+ A++LL A+P++++ LK ++Y G+ +TLD V Sbjct: 133 VEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYSSGKSILTLDEV 192 Query: 4287 VNALKSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXX 4108 A+ SKE EL ++ KS + + A G Sbjct: 193 AAAIYSKELELG--SVKKSIK--VQAEG-------LYVKDKNENKGKGEQKGKGKGKKGK 241 Query: 4107 XXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSD--MPXXXXX 3934 C++CGE GH+ C + + V GE+ G + + + + Sbjct: 242 SKKKPGCWTCGEEGHFRSSCPNQNKPQFKQSQVVK-GESSGGKGNLAEAAGYYVSEALSS 300 Query: 3933 XXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASG 3754 +D+GCS+HM+ R F + E G V + N+ V G+G I +K + G Sbjct: 301 TEVHLEDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDG 360 Query: 3753 NVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICH 3574 L NVR++PD+ NLLS E G + + G+++I G+ V+ + + LY+ + Sbjct: 361 LTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRIKAGNQVLLTGRRYDTLYLLN 420 Query: 3573 AESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLG 3394 + V V DD T LWH+RL HMS K +EIL + G K K+SS+ C+ C+ G Sbjct: 421 WKPVASESLAVVKRADD-TVLWHQRLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDCIYG 479 Query: 3393 KQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVP-SHGGNRYFLSVIDDYSRKVWTFL 3217 K F ++ K LEY+H+D+WG VP S G +YF+S+IDD++RKVW + Sbjct: 480 KAKRKSFSLAHHDTKEK----LEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYF 535 Query: 3216 LKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYT 3037 +K K + ++F +W L+ENQT +++K LRTDNGLEFCNKL D C GI RH+T YT Sbjct: 536 MKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYT 595 Query: 3036 PQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVF 2857 PQQNGV ERMNRT++EKVR + GL KRFW EA HT L+N++PS L + P+ + Sbjct: 596 PQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKW 655 Query: 2856 SGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVS 2677 SG P S L+ +GC AFVH KLEPR++K V +GYP GVKGY++W + K VVS Sbjct: 656 SGNPPVYSYLRRYGCVAFVHTDDGKLEPRAKKGVLIGYPVGVKGYKVW--ILDERKCVVS 713 Query: 2676 RDVIFNESEF--PCLTASVSTSNSKSDIAPS----EVEQSPDIAPSEVEQLPEMDPLNDV 2515 R++IF E+ + + S + D S ++E D+ +++ P + Sbjct: 714 RNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPES 773 Query: 2514 HAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMS 2335 + N DE+ DV+ +Y L RDR +R ++ P +F++ Sbjct: 774 PVVSTPTTQDTNDDEDS-----------DVNQSPLSYHLVRDRDKREIRAPRRFDDEDYY 822 Query: 2334 FFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVD 2155 A E + EP +YR+A N +W AM E++S N TW +V +P++ ++ Sbjct: 823 AEALYTTEDGEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIG 882 Query: 2154 CKWLFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFN 1984 C+W+FK K E RFKARLVAKG+ QKEGIDY EIFAPVVK ++R++L++VAQ + Sbjct: 883 CRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQED 942 Query: 1983 WELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFD 1804 EL+Q+DV TAFLHG+L + IYM PEG+ N VCLL KALYGLKQ+P+QWN +FD Sbjct: 943 LELEQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFD 1002 Query: 1803 KCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKM 1624 M+ + F +S YD C Y K + ++LLIYVDD+L+ S ++I ++ L F+M Sbjct: 1003 NFMKEICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEM 1062 Query: 1623 KDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQ 1444 KDLG A+KILGM I+R+R L L+Q Y+ KIL ++M+ AKP PL +HF Sbjct: 1063 KDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAAT 1122 Query: 1443 SPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLL 1264 K + + MK VPYS+A+GS+MY M+ TRPD+AYPV I+SR+MS P HW +KW+L Sbjct: 1123 EQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVL 1182 Query: 1263 RYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQG 1084 RY+K T+ L + K S +VGY D++ A D D R+S T VFTL G+ ISWKS LQ Sbjct: 1183 RYIKGTLKTRLCYKK-SSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQR 1241 Query: 1083 IVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRT 904 +VA S A KEAIWLKGLL + + K+ +F DSQSAI L KN V H+RT Sbjct: 1242 VVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERT 1301 Query: 903 KHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLVSFQKILN 751 KHI+V++HFIR+I+ G V+ KI T+ NPAD+ TK L V K FQ LN Sbjct: 1302 KHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSK---FQAALN 1349 >gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group] gi|53370655|gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica Group] gi|108710286|gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1322 Score = 877 bits (2266), Expect = 0.0 Identities = 495/1250 (39%), Positives = 720/1250 (57%), Gaps = 16/1250 (1%) Frame = -1 Query: 4479 LDMSKDIDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSIT 4300 L S + +I VF +++ D+ S + D+ ++LL ++P SY + + I RD +T Sbjct: 113 LHESGSVLNHISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYANFRHTILLSRDELT 172 Query: 4299 LDIVVNALKSKERE--LKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXX 4126 L V AL+++E+ + S + RGR Sbjct: 173 LAEVYEALQNREKMKGMVQSYASSSKGEALQVRGRSEQRTYNDSNDHDKSQSRGRSKSRG 232 Query: 4125 XXXXXXXXXXXKCYSCGEPGHYAKDC----SXXXXXXNEHANVASNGENF--GEMYVVTD 3964 C C + H+ ++C + + A+V ++ EN G+ VV Sbjct: 233 KKF---------CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVV-- 281 Query: 3963 VSDMPXXXXXXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKH-GYVSLANEKKCNVLG 3787 +D+ CSFH+ R+ FS+Y+ V++ V + ++ ++G Sbjct: 282 --------FAGYVASHDEWILDTACSFHICINRDWFSSYKSVQNEDVVRMGDDNPREIVG 333 Query: 3786 MGEICLKFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFK 3607 +G + +K G TLK+VRH+P + NL+S + L+ G + GV+K+ KGSLV Sbjct: 334 IGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMI 393 Query: 3606 AEKQN-NLYICHAESVLDNVNCVNSVQDD--KTSLWHRRLGHMSNKGLEILEKNGMFGKD 3436 + + NLY+ ++ +V +D+ KT+LWH RLGHMS G+ L K + Sbjct: 394 GDMNSANLYVLRGSTLHGSVTAAAVTKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGC 453 Query: 3435 KLSSVPFCDSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLS 3256 ++ FC+ CV GK V+F S + + +L+Y+HAD+WG S PS GG RY L+ Sbjct: 454 TQGNMKFCEHCVFGKHKRVKFNTS----VHRTKGILDYVHADLWGPSRKPSLGGARYMLT 509 Query: 3255 VIDDYSRKVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCA 3076 +IDDYSRK W + LK+K D F++ K +IE QT K++K L TDNG EFC+ DD C Sbjct: 510 IIDDYSRKEWPYFLKHKDDTFAAFKERKVMIERQTEKEVKVLCTDNGGEFCSDAFDDYCR 569 Query: 3075 KYGIKRHKTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSP 2896 K GI RH T+PYTPQQNGV ERMNRT++ K RC+ ++KRFW EA +TA YL+NRSP Sbjct: 570 KEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSP 629 Query: 2895 SVPLQGKCPEHVFSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRL 2716 S+PL K P ++SG D S L+VFGC A+ H KLEPR+ KC+FLGY GVKGY+L Sbjct: 630 SIPLNKKTPIEIWSGMPADYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKL 689 Query: 2715 WDRSVPGFKVVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPE 2536 W+ K +SR+VIFN EF S+ T D+ P ++ +VE + Sbjct: 690 WNPETN--KTFMSRNVIFN--EFVMFNDSLPT-----DVIPGGSDEEQQYVSVQVEHV-- 738 Query: 2535 MDPLNDVHAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEK 2356 +D E + +D ++ H +V D+ ++ R R P Sbjct: 739 ----------DDQETEIVGNDVNDTVQ-HSPSVLQPQDEPIAH----RRTKRSCGAPVRL 783 Query: 2355 FNEFQMSFFAFNVFESLDNS-EPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPK 2179 E M ++AF+ E ++N+ EP +Y EA+ S + +W++A++ EM SL N TW LV Sbjct: 784 IEECDMVYYAFSYAEQVENTLEPATYTEAVVSGDREKWISAIQEEMQSLEKNGTWELVHL 843 Query: 2178 PDSISVVDCKWLFKVKH---EAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIM 2008 P V CKW+FK K +E RFK RLVAKGF+Q G+DY ++F+PVVK +++R Sbjct: 844 PKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTF 903 Query: 2007 LALVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSP 1828 ++V + EL+Q+DV T FLHG+L++ IYM QPEGF+ ++VC LK++LYGLKQSP Sbjct: 904 FSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSP 963 Query: 1827 RQWNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQN 1648 RQW RFD M S FKRS +D C+Y K V+ PI+LL+YVDDML+ + + I ++ Sbjct: 964 RQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGS-PIYLLLYVDDMLIAAKSKEQITTLKK 1022 Query: 1647 CLCDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLAS 1468 L F MKDLG A+KILGM I R+R L L+Q SY++K+L +F+M +AKPV+ P+A Sbjct: 1023 QLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAP 1082 Query: 1467 HFVLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPH 1288 HF LS Q D ++ M +VPYS+A+GS+MY M+C+ PD+++ +S++SRYM+NPG H Sbjct: 1083 HFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEH 1142 Query: 1287 WEALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCI 1108 W+A++W+ RYL+ T + L F + G LVGYVDS+ A D D R+S T YVFT+ + Sbjct: 1143 WKAVQWIFRYLRGTADACLKFGRIDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAV 1200 Query: 1107 SWKSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCK 928 SWK+ LQ +VA S A KE++WLKGL +E+C +D +F DSQSAI L K Sbjct: 1201 SWKATLQPVVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTK 1260 Query: 927 NPVFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 + +FH+RTKHI++++H++RDIV +G +K KI NPADM TK +PV K Sbjct: 1261 DQMFHERTKHIDIKYHYVRDIVAQGKLKVCKISIHDNPADMMTKPIPVAK 1310 >gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1333 Score = 872 bits (2253), Expect = 0.0 Identities = 500/1240 (40%), Positives = 706/1240 (56%), Gaps = 12/1240 (0%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYG--RDSITLDIV 4288 I+ NID F +++ D+++T D+ A++LL ++P+ ++ L+ ++YG R +++LD V Sbjct: 133 IEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYGLGRVTLSLDEV 192 Query: 4287 VNALKSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXX 4108 V A+ SKE EL G + + + +G+ Sbjct: 193 VAAIYSKELEL-----GSNKKSI---KGQAEGLFVKEKTETRGRTEQRGNNNNNKKSRSK 244 Query: 4107 XXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDMPXXXXXXX 3928 C+ CGE + + + S +NG E TD+ Sbjct: 245 SRSKKGCWICGESSNGSSNYSE------------ANGLYVSEALSSTDIH---------- 282 Query: 3927 XXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGNV 3748 +D+GCS+HM+ R F + E G V + N+ V G+G I +K +G V Sbjct: 283 --LEDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMV 340 Query: 3747 FTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICHAE 3568 L NVR++P++ NLLS E G K G + I+ G V+ + LY+ Sbjct: 341 VRLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYLLQWR 400 Query: 3567 SVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLGKQ 3388 V + V QDD T LWHRRLGHMS K +++L K G+ K K+S + C+ C+ GK Sbjct: 401 PVTEESLSVVKRQDD-TILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLETCEDCIYGKA 459 Query: 3387 HHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVP-SHGGNRYFLSVIDDYSRKVWTFLLK 3211 + F ++ K LEY+H+D+WG SVP S G +YF+S IDDY+RKV + LK Sbjct: 460 KRIGFNLAQHDTREK----LEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLK 515 Query: 3210 NKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYTPQ 3031 K + D+F +W L+ENQT K+IK LRTDNGLEFCN+ D+ C++ GI H+T YTPQ Sbjct: 516 TKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQ 575 Query: 3030 QNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVFSG 2851 QNGV ERMNRTL+EKVR + GL K+FW EA HT L+N++PS L + P+ +SG Sbjct: 576 QNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSG 635 Query: 2850 KLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVSRD 2671 K P S L+ FGC AFVH KL PR++K + +GYP GVKGY++W + K VVSR+ Sbjct: 636 KSPIYSYLRRFGCIAFVHTDDGKLNPRAKKGILVGYPIGVKGYKIW--LLEEKKCVVSRN 693 Query: 2670 VIFNESEFPCLTASVSTSNSKSDIAPSEVEQSP------DIAPSEVEQLPEMDPLNDVHA 2509 VIF E+ AS D E E P D+ EV DP+ + + Sbjct: 694 VIFQEN------ASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQS 747 Query: 2508 ENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMSFF 2329 + EG ++ ET D+ +YQL RDR RR ++ P +F++ Sbjct: 748 PFNPSPATTQTYSEG---VNSET---DIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAE 801 Query: 2328 AFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCK 2149 A E EP Y EA +S N +W AM EM S N TW +V +P V+ + Sbjct: 802 ALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSR 861 Query: 2148 WLFKVK---HEAESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWE 1978 W++K K E RFKARLVAKG+ Q++GIDY EIFAPVVK ++RI++++VAQ + E Sbjct: 862 WIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLE 921 Query: 1977 LKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKC 1798 L+Q+DV TAFLHG+L + IYM PEG+ + + VCLL K+LYGLKQ+P+QWN +F+ Sbjct: 922 LEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAY 981 Query: 1797 MQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKD 1618 M + F RS+YD C Y K++ ++LL+YVDDML+ + + I ++ L F MKD Sbjct: 982 MSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKD 1041 Query: 1617 LGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQSP 1438 LG A++ILGM I+RNR+++TL L+Q Y+ KIL ++M+ +K V PL +H + Sbjct: 1042 LGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVE 1101 Query: 1437 KNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLRY 1258 K + + + MK +PYS+A+GS+MY MI TRPD+AYPV I+SRYMS P HW +KW+LRY Sbjct: 1102 KQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRY 1161 Query: 1257 LKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGIV 1078 +K ++ L + + SD K+VGY D+++A +D R+S T VFTL GS ISWKS Q +V Sbjct: 1162 IKGSLGTKLQYKRSSD-FKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVV 1220 Query: 1077 ALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTKH 898 ALS A KEA+W+KGLL E + K+ +F DSQSAI L KN V H+RTKH Sbjct: 1221 ALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKH 1280 Query: 897 IEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 I+VR+ +IRDI+ G KI T+ NPAD+ TK +PV K Sbjct: 1281 IDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNK 1320 >emb|CAA20201.1| putative transposable element [Arabidopsis thaliana] gi|7268932|emb|CAB79135.1| putative transposable element [Arabidopsis thaliana] Length = 1308 Score = 864 bits (2233), Expect = 0.0 Identities = 491/1241 (39%), Positives = 703/1241 (56%), Gaps = 13/1241 (1%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVN 4282 ID+N D F +++ ++ S + ++ A+++LN++P SY LK ++YG ++++ VV+ Sbjct: 143 IDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSYIQLKHTLKYGNKTLSVQDVVS 202 Query: 4281 ALKSKERELKH----CNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXX 4114 + KS EREL S+ RGRP Sbjct: 203 SAKSLERELSEQKETIRAPASTALYTAERGRPQTKNTQGQGKGRGRSNSKSRLT------ 256 Query: 4113 XXXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDMPXXXXX 3934 C+ C + GH KDC E G+ V+T+ Sbjct: 257 --------CWFCKKEGHVKKDCYAGKRKL--------ENEGQGKAGVITEKLVYSEALSM 300 Query: 3933 XXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASG 3754 +DSGC++HM+ + FS + E + + L ++ G G + + G Sbjct: 301 YDQEAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGG 360 Query: 3753 NVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICH 3574 ++ LKNVR VP+L NL+S L+ +G + + G G ++ K + N LY+ Sbjct: 361 SIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALCGNLVNGLYVLD 420 Query: 3573 AESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLG 3394 +V+ N NC ++KT LWH RLGHMS ++IL + G+ K + + FC++CV+G Sbjct: 421 GHTVV-NENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLEKKDIKELSFCENCVMG 479 Query: 3393 KQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFLL 3214 K + F + VL Y+HAD+WG +YFLS+IDD SRKVW L Sbjct: 480 KSKKLSFNVGK----HITDEVLGYIHADLWG---------KQYFLSIIDDKSRKVWLMFL 526 Query: 3213 KNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYTP 3034 K K + + F +WK L+ENQ KK+K LRTDNGLEFCN D+ C + GI+RH+T YTP Sbjct: 527 KTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTP 586 Query: 3033 QQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVFS 2854 QQNGV +RMNRTL+EKVRCL GL + FW EA TA YLVNRSP+ + PE ++ Sbjct: 587 QQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWL 646 Query: 2853 GKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVSR 2674 K P +L+ FGC A+VH KL+PR+ K VFLGYP+G KGY++W + K V+SR Sbjct: 647 DKKPGYKHLRRFGCIAYVHLDQGKLKPRALKGVFLGYPQGTKGYKVW--LLDEEKCVISR 704 Query: 2673 DVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAENDYE 2494 +++FNE++ DI S + DI S++E E H E Sbjct: 705 NIVFNENQV------------YKDIRESSEQSVKDI--SDLEGYNEFQVSVKEHGECSKT 750 Query: 2493 LGVN----NHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMSFFA 2326 GV + + + + E + +D SNYQ RDR RR PP+K ++ A Sbjct: 751 GGVTIEEIDQESDSENSVTQEPLIASID--LSNYQSARDRERRAPNPPQKLADYTHFALA 808 Query: 2325 FNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCKW 2146 + E +++ EP Y +A K ++ ++W MK E++SL N TW +V P V+ C+W Sbjct: 809 LVMAEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRW 868 Query: 2145 LFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWEL 1975 LFK+K E+ R+KARLVA+GFTQ++GIDY E+FAPVVK ++RI+++ V + + EL Sbjct: 869 LFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMEL 928 Query: 1974 KQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKCM 1795 +QMDV T FLHG+LD+ +YM+QPEGF + + VCLLKK+LYGLKQ+PRQWN +F M Sbjct: 929 EQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFM 988 Query: 1794 QSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKDL 1615 SL+F RS +D C+Y K+V+ ++LL+YVDDMLL + I ++ L F+MKD+ Sbjct: 989 LSLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDM 1048 Query: 1614 GDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSK--EQS 1441 G A +ILG++I+RNRK+ TL L+Q YV+K++ +F M++AK V+ P+ +HF L+ ++ Sbjct: 1049 GAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEI 1108 Query: 1440 PKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLR 1261 D E+ VPYS+A+GSVMY MI T PD+AY + ++SR+MS PG Sbjct: 1109 GSVDPEV-----VPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRPGA----------- 1152 Query: 1260 YLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGI 1081 L++ GY DS++A D D R+S + YVFT+ G+ +SWKS LQ + Sbjct: 1153 -----------------NLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHV 1195 Query: 1080 VALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTK 901 VALS A KEAIW++GLL ++ K A V+ DSQSAI L KN FHDRTK Sbjct: 1196 VALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHDRTK 1255 Query: 900 HIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 H+EV+F+FIRDI++ G VK KIHT VNPADM TKC+PVKK Sbjct: 1256 HVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKK 1296 >dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana] Length = 1342 Score = 864 bits (2232), Expect = 0.0 Identities = 498/1255 (39%), Positives = 717/1255 (57%), Gaps = 19/1255 (1%) Frame = -1 Query: 4461 IDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVN 4282 ++EN++ F KL+ D+++ D+ A+VLL ++P+ ++ LK ++Y + ++ L+ + + Sbjct: 138 MEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYCKTTLHLEEITS 197 Query: 4281 ALKSKERELKHCNI---GKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXX 4111 A++SK EL S + RGR Sbjct: 198 AIRSKILELGASGKLLKNNSDGLFVQDRGRSETRGKGPNKNKSRSKSKGAGKT------- 250 Query: 4110 XXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDM--PXXXX 3937 C+ CG+ GH+ K C N+ + + GE VTD + + Sbjct: 251 -------CWICGKEGHFKKQC-YVWKERNKQGSTSERGEASTVTARVTDAAALVVSRALL 302 Query: 3936 XXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFAS 3757 +D+GCSFHM+ ++ +++E G V + N+ V G+G++ +K Sbjct: 303 GFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNED 362 Query: 3756 GNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYIC 3577 G+ L +VR++P++ NL+S LED G + KG++ I K L V +K++ LY Sbjct: 363 GSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVLTGKKESTLYFL 422 Query: 3576 HAESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVL 3397 ++ N ++ + D+TSLWH RLGH+ KGL++L G K+ + S Sbjct: 423 QGTTLAGEANVIDK-EKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNIMIS--------F 473 Query: 3396 GKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVP-SHGGNRYFLSVIDDYSRKVWTF 3220 G HV L+Y+H+D+WG ++VP S G +YF++ IDD++R+ W + Sbjct: 474 GAAKHVT------------KDKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIY 521 Query: 3219 LLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPY 3040 ++ K + +F +WKT IENQ KK+K L TDNGLEFCN+ D C K G+ RH+T Y Sbjct: 522 FIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAY 581 Query: 3039 TPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHV 2860 TPQQNGV ERMNRT++ KVRC+ GL K+FW EA TA +L+N+SPS ++ PE Sbjct: 582 TPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEK 641 Query: 2859 FSGKLPDLSNLKVFGCAAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVV 2680 ++G PD LK FG A++H KL PR++K +FLGYP+GVK +++W + K VV Sbjct: 642 WTGHPPDYKILKKFGSVAYIHSDQGKLNPRAKKGIFLGYPDGVKRFKVW--LLEDRKCVV 699 Query: 2679 SRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAEND 2500 SRD++F E++ S+ D +EVE++ E++ L D EN Sbjct: 700 SRDIVFQENQM--YKELQKNDMSEEDKQLTEVERTL----IELKNLSADD-------ENQ 746 Query: 2499 YELGVNNHDEEGLL------EIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQM 2338 E G N++ E+ + E D DD NY L RDR RR ++ P++F E Sbjct: 747 SEGGDNSNQEQASTTRSASKDKQVEETDSD-DDCLENYLLARDRIRRQIRAPQRFVEEDD 805 Query: 2337 SF--FAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSIS 2164 S FA + E + EP +Y EA++S +W A EM+S+ N TW ++ KP+ Sbjct: 806 SLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKR 865 Query: 2163 VVDCKWLFKVKHE---AESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVA 1993 V+ CKW+FK K E R+KARLVAKGF+Q+EGIDY EIF+PVVK ++R +L++V Sbjct: 866 VIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVV 925 Query: 1992 QFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNI 1813 QF+ EL+Q+DV TAFLHG+LD+ I M QPEG+ D + VCLLKK+LYGLKQSPRQWN Sbjct: 926 QFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQ 985 Query: 1812 RFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDN 1633 RFD M + ++RS Y+ C+Y + ++ I+LL+YVDDML+ S I+ ++ L Sbjct: 986 RFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNRE 1045 Query: 1632 FKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVL- 1456 F+MKDLG ARKILGM I RNR+Q L L+Q YV +L F M +K PL +HF L Sbjct: 1046 FEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLR 1105 Query: 1455 -SKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEA 1279 + E++ D+E MK VPY NAIGS+MY MI +RPD+AYPV ++SR+MS P HW+A Sbjct: 1106 AANEKTLARDAEY--MKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQA 1163 Query: 1278 LKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWK 1099 +KW++RY+K T + L F K D ++ GY DS+ A D D R+S T +VFT G+ ISWK Sbjct: 1164 VKWVMRYMKGTQDTCLRFKK-DDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWK 1222 Query: 1098 SQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPV 919 S LQ +VALS A KEAIWL+GL +E+ V DSQSAI L KN V Sbjct: 1223 SGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSV 1282 Query: 918 FHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLVSFQKIL 754 H+RTKHI+VR+HFIR+ + G ++ KI T NPAD+ TK +PV KL K+L Sbjct: 1283 HHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLL 1337 >emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera] Length = 1261 Score = 861 bits (2225), Expect = 0.0 Identities = 471/1047 (44%), Positives = 648/1047 (61%), Gaps = 5/1047 (0%) Frame = -1 Query: 3900 DSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGNVFTLKNVRHV 3721 DSG SFH +P R + NY G V LA+ +V+G+G++ + +G+V+ L+ VR++ Sbjct: 252 DSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRYI 311 Query: 3720 PDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICHAESVLDNVNCV 3541 PDL NL+S L+D G + G K+ KG+ V+ + +K + LY+ D + Sbjct: 312 PDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTDTLYMTSCPR--DTIAVA 369 Query: 3540 NSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLGKQHHVQF-PIS 3364 ++ D TSLWHRRLGHMS K +++L G + K C+SC+LGKQ V F Sbjct: 370 DASTD--TSLWHRRLGHMSEKWMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTG 427 Query: 3363 SVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFLLKNKSDVLDEF 3184 P K LE +H D+WG S V S GG+RY+++ I+D SRKVW + LKNKSDV F Sbjct: 428 RTPKAEK----LELVHTDLWGPSPVASLGGSRYYITFINDSSRKVWVYFLKNKSDVFVTF 483 Query: 3183 QKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYTPQQNGVTERMN 3004 +KWK ++E +TG K+K LR+DNG E+ + + C GI+ KT+P TPQQNGV ERMN Sbjct: 484 KKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCXAQGIRMEKTIPGTPQQNGVAERMN 543 Query: 3003 RTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVFSGKLPDLSNLK 2824 RTL E+ R +R+ GL K FW +A+ TA YL+NR PSVP++ + PE V+SGK S+LK Sbjct: 544 RTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLK 603 Query: 2823 VFGCAAFVHQKGD---KLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVVSRDVIFNES 2653 VFGC ++VH D KL+ +S+ C F+GY + GYR WD K++ SR+VIFNE Sbjct: 604 VFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQ--NRKIIRSRNVIFNEQ 661 Query: 2652 EFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPLNDVHAENDYELGVNNHD 2473 ++V++ ++ D SE ++ S V++ E D Sbjct: 662 VMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDK------------------ 703 Query: 2472 EEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMSFFAFNVFESLDNSE 2293 E V+ VD ++ RS R +PP++++ N D E Sbjct: 704 ---------ENVNSQVDLSTPIVEVR--RSSRNTRPPQRYSP------VLNYLLLTDGGE 746 Query: 2292 PNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVDCKWLFKVKHEAE-S 2116 P Y EA++ ENS +W AMK EM+SL N+TW L P + KW++++K+E + S Sbjct: 747 PECYDEALQDENSSKWELAMKDEMDSLLGNQTWZLTELPVGKKALHNKWVYRIKNEHDGS 806 Query: 2115 TRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNWELKQMDVTTAFLHGD 1936 R+KARLV KGF QKEGIDYTEIF+PVVK +T+R++L +VA N L+Q+DV TAFLHGD Sbjct: 807 KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGD 866 Query: 1935 LDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDKCMQSLKFKRSVYDHC 1756 L++ +YM QPEGF+ N VC L+K+LYGLKQ+PRQW +FD M + FKR DHC Sbjct: 867 LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHC 926 Query: 1755 LYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMKDLGDARKILGMNIVR 1576 YFK D+ I LL+YVDDML+ ++ I +++ L F MKDLG A++ILGM I+R Sbjct: 927 CYFKSFDNSY-IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIR 985 Query: 1575 NRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQSPKNDSEMNAMKKVPY 1396 ++ TL L+Q YV+K+L +F+M+ AKPV+ PL SHF LSKEQSPK + E + M KVPY Sbjct: 986 DKANGTLKLSQSEYVKKVLXRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDXMSKVPY 1045 Query: 1395 SNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLRYLKSTMNVGLHFSKC 1216 ++AIGS+MY M+CTR DIA+ V ++SR+MS PG HWEA+KW+LRYLK +++ L F+ Sbjct: 1046 ASAIGSLMYAMVCTRLDIAHAVGVVSRFMSXPGKQHWEAVKWILRYLKGSLDTCLCFTGA 1105 Query: 1215 SDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGIVALSXXXXXXXXXXX 1036 S LKL GYVD++ A D D+RKSTT +VFTL G+ ISW S LQ IV LS Sbjct: 1106 S--LKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATE 1163 Query: 1035 AFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTKHIEVRFHFIRDIVDK 856 A KE IWL G L E+ + I+ SDSQSAI L KN FH ++KHI+ ++HFIR +V+ Sbjct: 1164 AGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVED 1223 Query: 855 GIVKFEKIHTDVNPADMGTKCLPVKKL 775 +V EKI NPADM TK + ++KL Sbjct: 1224 KLVILEKICGSKNPADMLTKGVTIEKL 1250 >sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed protein product [Nicotiana tabacum] Length = 1328 Score = 857 bits (2215), Expect = 0.0 Identities = 498/1241 (40%), Positives = 704/1241 (56%), Gaps = 16/1241 (1%) Frame = -1 Query: 4452 NIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGRDSITLDIVVNALK 4273 +++VF L+ + + G K ++ A++LLN++P SY++L I +G+ +I L V +AL Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALL 180 Query: 4272 SKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXXXXXXXXXXXXXX 4093 E+ K + + RGR Sbjct: 181 LNEKMRKKPE-NQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN-------- 231 Query: 4092 KCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMY-----VVTDVSDMPXXXXXXX 3928 CY+C +PGH+ +DC E + N +N M VV +++ Sbjct: 232 -CYNCNQPGHFKRDCPNPRKGKGETSG-QKNDDNTAAMVQNNDNVVLFINE--EEECMHL 287 Query: 3927 XXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEICLKFASGNV 3748 VD+ S H +P R+LF Y G V + N + G+G+IC+K G Sbjct: 288 SGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCT 347 Query: 3747 FTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEKQNNLYICHAE 3568 LK+VRHVPDL NL+S AL+ G E + ++ KGSLV+ K + LY +AE Sbjct: 348 LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAE 407 Query: 3567 SVLDNVNCVNSVQDD-KTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPFCDSCVLGK 3391 +N + QD+ LWH+R+GHMS KGL+IL K + K ++V CD C+ GK Sbjct: 408 ICQGELN---AAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGK 464 Query: 3390 QHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSRKVWTFLLK 3211 QH V F SS ++ +L+ +++DV G + S GGN+YF++ IDD SRK+W ++LK Sbjct: 465 QHRVSFQTSSERKLN----ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 520 Query: 3210 NKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRHKTVPYTPQ 3031 K V FQK+ L+E +TG+K+K LR+DNG E+ ++ ++ C+ +GI+ KTVP TPQ Sbjct: 521 TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQ 580 Query: 3030 QNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGKCPEHVFSG 2851 NGV ERMNRT++EKVR + L K FWGEA+ TA YL+NRSPSVPL + PE V++ Sbjct: 581 HNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTN 640 Query: 2850 KLPDLSNLKVFGCAAFVH---QKGDKLEPRSRKCVFLGYPEGVKGYRLWDRSVPGFKVVV 2680 K S+LKVFGC AF H ++ KL+ +S C+F+GY + GYRLWD KV+ Sbjct: 641 KEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKK--KVIR 698 Query: 2679 SRDVIFNESEFPCLTASVSTSNSKSDIAPSEV-----EQSPDIAPSEVEQLPEMDPLNDV 2515 SRDV+F ESE TA+ + K+ I P+ V +P A S +++ E Sbjct: 699 SRDVVFRESEVR--TAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGE 756 Query: 2514 HAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEFQMS 2335 E +L +EG+ E+ + T ++ + R SRR P ++ Sbjct: 757 VIEQGEQL------DEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY--PSTEYVLIS-- 806 Query: 2334 FFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSISVVD 2155 D+ EP S +E + + + AM+ EM SL N T+ LV P + Sbjct: 807 ----------DDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLK 856 Query: 2154 CKWLFKVKHEAES--TRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQFNW 1981 CKW+FK+K + + R+KARLV KGF QK+GID+ EIF+PVVK T++R +L+L A + Sbjct: 857 CKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDL 916 Query: 1980 ELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIRFDK 1801 E++Q+DV TAFLHGDL++ IYM+QPEGF + + VC L K+LYGLKQ+PRQW ++FD Sbjct: 917 EVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDS 976 Query: 1800 CMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNFKMK 1621 M+S + ++ D C+YFK I LL+YVDDML++ I ++ L +F MK Sbjct: 977 FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036 Query: 1620 DLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSKEQS 1441 DLG A++ILGM IVR R L L+Q Y+E++L +F+M NAKPV+ PLA H LSK+ Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096 Query: 1440 PKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKWLLR 1261 P E M KVPYS+A+GS+MY M+CTRPDIA+ V ++SR++ NPG HWEA+KW+LR Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1156 Query: 1260 YLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSCISWKSQLQGI 1081 YL+ T L F LK GY D++ A D DNRKS+T Y+FT G ISW+S+LQ Sbjct: 1157 YLRGTTGDCLCFGGSDPILK--GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214 Query: 1080 VALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVFHDRTK 901 VALS KE IWLK L E+ K +V+ DSQSAI L KN ++H RTK Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTK 1274 Query: 900 HIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 HI+VR+H+IR++VD +K KI T+ NPADM TK +P K Sbjct: 1275 HIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1315 >gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 848 bits (2192), Expect = 0.0 Identities = 485/1253 (38%), Positives = 710/1253 (56%), Gaps = 20/1253 (1%) Frame = -1 Query: 4470 SKDIDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYGR--DSITL 4297 S + ++I+ L + ++ K ++ A +LL ++P SY+ L I D++ Sbjct: 110 STSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNIADTLHF 169 Query: 4296 DIVVNALKSKERELKH----CNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXXX 4129 D V A+ +E K+ K +E + RGR Sbjct: 170 DDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKNNIK 229 Query: 4128 XXXXXXXXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHAN-------VASNGENFGEMYVV 3970 CY CG GH K+C +++ VAS ++ +Y Sbjct: 230 -------------CYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSE 276 Query: 3969 TDVSDMPXXXXXXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVL 3790 S +DSG ++HM+P R+ F +YE + G V + N+ + Sbjct: 277 AATSS------EGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIA 330 Query: 3789 GMGEICLKFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVF 3610 G+G I LK G V ++ VRHV L NLLS L+D+G + G++K++KG+LVV Sbjct: 331 GVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVM 390 Query: 3609 KAEK-QNNLYICHAESVLD-NVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKD 3436 KAEK +NLY+ +++ + + + + Q++ T +WH+RLGHMS +GL++L + + Sbjct: 391 KAEKITSNLYMLLGDTLQEADASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGL 450 Query: 3435 KLSSVPFCDSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLS 3256 K ++PFC+ CV+ KQH ++F + V SK +L+ +H+DVW S S GG RYF+S Sbjct: 451 KTVNLPFCEHCVISKQHRLKF--ARVTTRSK--HILDLIHSDVW-ESPKLSLGGARYFVS 505 Query: 3255 VIDDYSRKVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCA 3076 IDDYSR++W + +K KSDV F+ +K IE +TGKKIK LRTDNG E+ + C Sbjct: 506 FIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCK 565 Query: 3075 KYGIKRHKTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSP 2896 + GI R TV +TPQQNGV ERMNRTLLE+ R + T ++K FW EA+ TA Y++NRSP Sbjct: 566 QEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSP 625 Query: 2895 SVPLQGKCPEHVFSGKLPDLSNLKVFGCAAFV---HQKGDKLEPRSRKCVFLGYPEGVKG 2725 S + K P ++ GK D S+L VFGC +V Q+ KL+P+SRKC+FLGY + VKG Sbjct: 626 STTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 685 Query: 2724 YRLWDRSVPGFKVVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQ 2545 YRLWD + KVVVSRDV+F E+E + ST + + E + D + +E Sbjct: 686 YRLWDPTAR--KVVVSRDVVFAENELQSEQKNDSTFKETAILQIEEKSKESDSSEAE--- 740 Query: 2544 LPEMDPLNDVHAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKP 2365 +H E DDV++G R +R+ KP Sbjct: 741 -----------------------------SVHEEQEPDDVNNG------VRRSTRQTQKP 765 Query: 2364 PEKFNEFQMSFFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLV 2185 + + A+ + + EP+++ EA+ ++ +W+ A+ EM +L NKTW LV Sbjct: 766 SWQSDYVMTGHDAYCLI--AEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELV 823 Query: 2184 PKPDSISVVDCKWLFKVKHEA--ESTRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRI 2011 P + KW++K+K + + R++ARLV KG+ QKEGID+ EIF+PVV+ TT+R+ Sbjct: 824 ELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRV 883 Query: 2010 MLALVAQFNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQS 1831 +LA+ A + L+Q+DV TAFLHG+L++ IYM QPEGF + N VC L K+LYGLKQ+ Sbjct: 884 VLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQA 943 Query: 1830 PRQWNIRFDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQ 1651 PR W RFD + SL + R DHC Y+K D I LL+YVDD+L++ P ++ ++ Sbjct: 944 PRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELK 1003 Query: 1650 NCLCDNFKMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLA 1471 L F MKDLG A KILGM I R+RK + L+Q +Y+ K+L +F+M + KP++ PL Sbjct: 1004 AQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLP 1063 Query: 1470 SHFVLSKEQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMP 1291 +F LS SP N++E M +VPY++A+GS+MY MICTRPDIA V ++SR+M++PG Sbjct: 1064 VNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKE 1123 Query: 1290 HWEALKWLLRYLKSTMNVGLHFSKCSDGLKLVGYVDSNNANDRDNRKSTTSYVFTLCGSC 1111 HW A+K ++RY+K T V + F L + GYVDS+ A D D RKSTT YVFTL G Sbjct: 1124 HWNAVKRIMRYIKGTSGVAVCFG--GSELTVRGYVDSDFAGDHDKRKSTTGYVFTLTGGA 1181 Query: 1110 ISWKSQLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLC 931 +SW S+LQ +VALS A KEAIW++ L+ E+ H + V+ DSQSA+ + Sbjct: 1182 VSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIA 1241 Query: 930 KNPVFHDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKKLV 772 +NP FH RTKHI V++HF+R++V++G V +KIHT+ N AD+ TK + K V Sbjct: 1242 RNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFV 1294 >dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] Length = 1298 Score = 848 bits (2190), Expect = 0.0 Identities = 496/1246 (39%), Positives = 694/1246 (55%), Gaps = 15/1246 (1%) Frame = -1 Query: 4470 SKDIDENIDVFTKLLQDIKSTGDKNIDDYSAVVLLNAIPQSYNDLKAAIEYG--RDSITL 4297 S + E+++ L + S K A +LL ++P SY+ L + D + Sbjct: 111 STSVTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVF 170 Query: 4296 DIVVNAL-----KSKERELKHCNIGKSSERVMHARGRPXXXXXXXXXXXXNEXXXXXXXX 4132 D V A+ + K +E + N+ + +E + RGR Sbjct: 171 DDVAAAVLEEESRRKNKEDRQVNL-QQAEALTVMRGRSTERGQSSGRGRSKSSKKNLT-- 227 Query: 4131 XXXXXXXXXXXXXKCYSCGEPGHYAKDCSXXXXXXNEHANVASNGENFGEMYVVTDVSDM 3952 CY+CG+ GH KDC N NVAS ++ + ++ Sbjct: 228 --------------CYNCGKKGHLKKDCWNLAQNSNPQGNVASTSDDGSALCCEASIA-- 271 Query: 3951 PXXXXXXXXXXXXXXXVDSGCSFHMSPFRNLFSNYEEVKHGYVSLANEKKCNVLGMGEIC 3772 +DSG ++HM+ + F +YE + G V ++ ++G+G I Sbjct: 272 ----REGRKRFADIWLIDSGATYHMTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIK 327 Query: 3771 LKFASGNVFTLKNVRHVPDLCYNLLSCAALEDVGLEGKWGKGVMKIMKGSLVVFKAEK-Q 3595 LK G V T+++VRHV L NLLS L++ + + KGVMKI +G+LVV K EK Sbjct: 328 LKMYDGTVQTVQDVRHVKGLKKNLLSYGILDNSATQIETQKGVMKIFQGALVVMKGEKIA 387 Query: 3594 NNLYICHAESVLDNVNCVNSVQDDKTSLWHRRLGHMSNKGLEILEKNGMFGKDKLSSVPF 3415 NLY+ E++ + V + D T LWH++LGHMS++G++IL + + S+P Sbjct: 388 ANLYMLKGETLQEAEASVAACSPDSTLLWHQKLGHMSDQGMKILVEQKLIPGLTKVSLPL 447 Query: 3414 CDSCVLGKQHHVQFPISSVPNMSKCTSVLEYLHADVWGHSSVPSHGGNRYFLSVIDDYSR 3235 C+ C+ KQH ++F S+ S+ VLE +H+DVW + VPS GG +YF+S IDDYSR Sbjct: 448 CEHCITSKQHRLKFSTSN----SRGKVVLELVHSDVW-QAPVPSLGGAKYFVSFIDDYSR 502 Query: 3234 KVWTFLLKNKSDVLDEFQKWKTLIENQTGKKIKALRTDNGLEFCNKLLDDMCAKYGIKRH 3055 + W + +K KSDV F+ +K +E +GKKIK RTDNG E+ ++ DD C K GIKR Sbjct: 503 RCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQ 562 Query: 3054 KTVPYTPQQNGVTERMNRTLLEKVRCLRVTGGLSKRFWGEALHTATYLVNRSPSVPLQGK 2875 TV YTPQQNGV ERMNRTLLE+ R + GL K FW EA++TA YLVNR+PS ++ K Sbjct: 563 FTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELK 622 Query: 2874 CPEHVFSGKLPDLSNLKVFGC---AAFVHQKGDKLEPRSRKCVFLGYPEGVKGYRLWDRS 2704 P +++GK D SNL +FG A + Q+ KL+P+SRKC FLGY +GVKGYRLWD + Sbjct: 623 TPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPT 682 Query: 2703 VPGFKVVVSRDVIFNESEFPCLTASVSTSNSKSDIAPSEVEQSPDIAPSEVEQLPEMDPL 2524 KVV+SRDVIF E + ++ S ++ P+ +VE+ E D Sbjct: 683 --AHKVVISRDVIFVEDRL-----------QRGEVDDSTEKEKPETTQIQVEEEFEQD-- 727 Query: 2523 NDVHAENDYELGVNNHDEEGLLEIHYETVHDDVDDGASNYQLTRDRSRRVVKPPEKFNEF 2344 E H++ + +S TR R +P + Sbjct: 728 ----------------------SSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHSDYV 765 Query: 2343 QMSFFAFNVFESLDNSEPNSYREAIKSENSVEWLNAMKSEMNSLHANKTWMLVPKPDSIS 2164 A+ + ++ EP++++EAI S + +W AM+ E+ +LH N TW LVP P Sbjct: 766 MEGNVAYCLL--TEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRK 823 Query: 2163 VVDCKWLFKVKHEAES--TRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALVAQ 1990 + KW+FK+K + R++ARLV KG+ QKEGID+ EIF+PVV+ TTVR++LA+ A Sbjct: 824 PIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCAT 883 Query: 1989 FNWELKQMDVTTAFLHGDLDKPIYMKQPEGFVDSKNPNHVCLLKKALYGLKQSPRQWNIR 1810 FN L+Q+DV TAFLHGDL++ IYM QPEGF D +N N VC L K+LYGLKQ+PR W R Sbjct: 884 FNLHLEQLDVKTAFLHGDLEEEIYMLQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKR 943 Query: 1809 FDKCMQSLKFKRSVYDHCLYFKDVDSPVPIFLLIYVDDMLLISPCVKSIKHVQNCLCDNF 1630 FD + L + R D C YFK + LL+YVDDML+ P I ++ L F Sbjct: 944 FDSFIMCLGYNRLNADPCAYFKRFGKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREF 1003 Query: 1629 KMKDLGDARKILGMNIVRNRKQSTLVLNQISYVEKILSKFSMSNAKPVNVPLASHFVLSK 1450 +MKDLG A KILGM I R+R + L+Q +Y++KILS+FSM + K ++ PL + +S Sbjct: 1004 EMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSS 1063 Query: 1449 EQSPKNDSEMNAMKKVPYSNAIGSVMYLMICTRPDIAYPVSILSRYMSNPGMPHWEALKW 1270 SP N+ M +VPY++A+GS+M+ MICTRPDIA V ++SRYM+NPG HW +K Sbjct: 1064 SMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKR 1123 Query: 1269 LLRYLKSTMNVGLHFSKCSDGLKLV--GYVDSNNANDRDNRKSTTSYVFTLCGSCISWKS 1096 +LRY+K T +V L C G + GYVDS+ A D D KSTT YVF + G +SW S Sbjct: 1124 ILRYIKGTSDVAL----CYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVS 1179 Query: 1095 QLQGIVALSXXXXXXXXXXXAFKEAIWLKGLLSEVCHLDKNAIVFSDSQSAIQLCKNPVF 916 +LQ +VA S A KEAIWLK LL E+ H + +F DSQSA+ L +NP F Sbjct: 1180 KLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAF 1239 Query: 915 HDRTKHIEVRFHFIRDIVDKGIVKFEKIHTDVNPADMGTKCLPVKK 778 H RTKHI V++HFIR+ V +G V +KIHT N AD TK + V K Sbjct: 1240 HSRTKHIRVQYHFIREKVKEGTVDLQKIHTADNVADFLTKIINVDK 1285