BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00019302
         (1278 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   398   e-108
gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlise...   348   4e-93
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   340   1e-90
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   338   3e-90
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   337   5e-90
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   336   1e-89
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   333   1e-88
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   333   1e-88
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   333   1e-88
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   332   2e-88
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...   330   8e-88
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   329   1e-87
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   329   1e-87
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           326   1e-86
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           326   2e-86
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   326   2e-86
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   318   4e-84
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   317   5e-84
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]       315   2e-83
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian...   315   2e-83

>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  398 bits (1023), Expect = e-108
 Identities = 208/326 (63%), Positives = 230/326 (70%), Gaps = 5/326 (1%)
 Frame = +2

Query: 38   MAAEDRTNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXND 217
            MAAE R NS   Q ENAP +L +Y            KNVE                   D
Sbjct: 1    MAAESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKD 60

Query: 218  VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 397
            VLFEDEWLIAVNKP GIYCE++LSSV+ L+++DQ         KLQELHLSNRLDRDTSG
Sbjct: 61   VLFEDEWLIAVNKPNGIYCETILSSVQILLNTDQ--------VKLQELHLSNRLDRDTSG 112

Query: 398  VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 577
            V ++TKSHKVAAKLVKAFT+HMVKKTYLA CVG+ PKW  +IIKSGHGRSKHGAWRVYA 
Sbjct: 113  VILITKSHKVAAKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAY 172

Query: 578  SDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKN-----GXXXXXXXXXXXXXXXXX 742
            SD GR LPGGSFVRDMET F+VLSVNGK CS  S+ N                       
Sbjct: 173  SDVGRVLPGGSFVRDMETSFDVLSVNGKSCSQESDANHEEEEKIVAEEKSEVVGSCCSDE 232

Query: 743  XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 922
               V+VRA+PRSGRTHQIRLHCQYLGIPI GDVKY+GVYEWKDR YEGHELHAE+LSFEH
Sbjct: 233  RDEVVVRAHPRSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEH 292

Query: 923  PVTGQSVLIHAPLPLWASEELAKVCL 1000
            P+TGQSV I APLPLWAS+ LA+  L
Sbjct: 293  PITGQSVFIQAPLPLWASQALAQAQL 318


>gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlisea aurea]
          Length = 307

 Score =  348 bits (892), Expect = 4e-93
 Identities = 180/301 (59%), Positives = 211/301 (70%), Gaps = 1/301 (0%)
 Frame = +2

Query: 80  ENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNKP 259
           ++A  TLG+Y            K+VE                  NDVLFEDEWLIAVNKP
Sbjct: 15  KSAAETLGNYPAPLSPPPPPISKDVELSRALTASSSSALFSLSENDVLFEDEWLIAVNKP 74

Query: 260 CGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAKL 439
            GIYCES+LSSVRT ++S     +P   A+ QELHLSNRLDRDTSGVT+VTKSHKVAAKL
Sbjct: 75  PGIYCESILSSVRTFLNS-----VP---ARTQELHLSNRLDRDTSGVTLVTKSHKVAAKL 126

Query: 440 VKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFVR 619
           VK FTDH V+KTY+A C+G+ P+   I++KSGHGRSKHGAWRVYA SD  R LPGGS +R
Sbjct: 127 VKTFTDHKVQKTYIASCIGTPPETHSILVKSGHGRSKHGAWRVYAFSDIARKLPGGSLIR 186

Query: 620 DMETYFEVLSVNGKGCSLGS-EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRTHQI 796
           +MET F+V++VNG+  S  S + +                     V+VRAYP+SGRTHQI
Sbjct: 187 EMETLFQVIAVNGEKISSPSPDSDHQHIVVEAKSRISSDSDKASEVIVRAYPKSGRTHQI 246

Query: 797 RLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPLWAS 976
           RLHCQYLGIPIRGDVKYDGVYEW  R YE H+LHAESLSFEHPVTG S++I APLPLWA 
Sbjct: 247 RLHCQYLGIPIRGDVKYDGVYEWGGRKYECHQLHAESLSFEHPVTGHSLVIQAPLPLWAQ 306

Query: 977 E 979
           +
Sbjct: 307 Q 307


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
           gi|462401230|gb|EMJ06787.1| hypothetical protein
           PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  340 bits (871), Expect = 1e-90
 Identities = 176/307 (57%), Positives = 206/307 (67%), Gaps = 4/307 (1%)
 Frame = +2

Query: 77  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 256
           S+NA  T  +Y            K++E                  +DV+FED+WLI VNK
Sbjct: 12  SQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNK 71

Query: 257 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 436
           P G+YCESVL SV  L+     S  P  Q    ELHL+NRLDRDTSG+ V+TKSHKVA+K
Sbjct: 72  PQGVYCESVLESVPQLLCDSAESGTPANQL---ELHLANRLDRDTSGLMVITKSHKVASK 128

Query: 437 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 616
           LVKAFTDH + KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 129 LVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMV 188

Query: 617 RDMETYFEVLSVNGKGCSLGS----EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 784
           RDMET FEVLS+NG+G SL      +K+                     +LVRA PRSGR
Sbjct: 189 RDMETSFEVLSINGQG-SLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRSGR 247

Query: 785 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 964
           THQIRLHCQYLGI IRGDVKY+GVYEWK R Y+GHELHAESLSFEHP+TG  V+  AP+P
Sbjct: 248 THQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVP 307

Query: 965 LWASEEL 985
            WAS+ L
Sbjct: 308 SWASQAL 314


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  338 bits (867), Expect = 3e-90
 Identities = 169/258 (65%), Positives = 194/258 (75%), Gaps = 2/258 (0%)
 Frame = +2

Query: 218 VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 397
           V+FEDEW+IAVNKP GIYCESVLSS+  L++ D G       A + ELHL+NRLDRDTSG
Sbjct: 54  VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 105

Query: 398 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 577
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 106 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 165

Query: 578 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 751
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 166 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKDEDIVIVQEKSVIGCDLKKDE 225

Query: 752 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 931
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK  +Y+ HELHAESLSFEHP+T
Sbjct: 226 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPIT 285

Query: 932 GQSVLIHAPLPLWASEEL 985
           G+S+L+ APLP WA + L
Sbjct: 286 GKSMLLQAPLPSWAIQPL 303


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  337 bits (865), Expect = 5e-90
 Identities = 171/303 (56%), Positives = 205/303 (67%), Gaps = 4/303 (1%)
 Frame = +2

Query: 77  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 256
           S+N P TL +Y            K +E                  +DVL+ED+WLIAVNK
Sbjct: 12  SQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNK 71

Query: 257 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAK--LQELHLSNRLDRDTSGVTVVTKSHKVA 430
           P G+YCE+VL SV  ++++      P E A+    E HL+NRLDRDTSGV V+TKSHKVA
Sbjct: 72  PQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVA 131

Query: 431 AKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGS 610
           +KLVKAFTDH +KKTY+ALC+G  PKW+KI IKSGHGRSK G WRVYA SD G+TLPGGS
Sbjct: 132 SKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGS 191

Query: 611 FVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 784
            V+DMET FE+LSVNG+G    L   +                      +LVRA+P+SGR
Sbjct: 192 TVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGR 251

Query: 785 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 964
           THQIRLHCQYLGI IRGDVKY+GVYEW+ R Y+GHELHAE+LSFEHPVTG  V++ APLP
Sbjct: 252 THQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 311

Query: 965 LWA 973
            WA
Sbjct: 312 SWA 314


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  336 bits (861), Expect = 1e-89
 Identities = 173/316 (54%), Positives = 208/316 (65%), Gaps = 8/316 (2%)
 Frame = +2

Query: 56  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 235
           +N +   S+NAP T  +Y            K++E                  +DVL+EDE
Sbjct: 2   SNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDE 61

Query: 236 WLIAVNKPCGIYCESVLSSVRTLMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGV 400
           WL+AVNKP G+YCESVL+SV  L++ D      G +    +  L ELHL+NRLDRDTSGV
Sbjct: 62  WLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGV 121

Query: 401 TVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAIS 580
            V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA S
Sbjct: 122 MVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAAS 181

Query: 581 DAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXX 751
           D GR LPGGS VRDM T FEVLSVNG+G        +++                     
Sbjct: 182 DVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNE 241

Query: 752 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 931
           +LVR +PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLS EHP+T
Sbjct: 242 ILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPIT 301

Query: 932 GQSVLIHAPLPLWASE 979
           G  V++ APLPLWA++
Sbjct: 302 GCPVMVQAPLPLWATQ 317


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
           gi|567881937|ref|XP_006433527.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535648|gb|ESR46766.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535649|gb|ESR46767.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  333 bits (854), Expect = 1e-88
 Identities = 173/317 (54%), Positives = 205/317 (64%), Gaps = 8/317 (2%)
 Frame = +2

Query: 59  NSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEW 238
           N +    ENAP    +Y            K++E                  +DVL+EDEW
Sbjct: 36  NPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEW 95

Query: 239 LIAVNKPCGIYCESVLSSVRTLMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGVT 403
            +AVNKP G+YCESVL+SV   ++ D      G +    +  L ELHL+NRLDRDTSGV 
Sbjct: 96  FVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVM 155

Query: 404 VVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISD 583
           V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA SD
Sbjct: 156 VITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASD 215

Query: 584 AGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXXV 754
            GR LPGGS VRDM T FEVLSVNG+G        +++                     +
Sbjct: 216 VGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEI 275

Query: 755 LVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTG 934
           LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLSF+HPVTG
Sbjct: 276 LVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTG 335

Query: 935 QSVLIHAPLPLWASEEL 985
             V++ APLPLW +E L
Sbjct: 336 CPVMVQAPLPLWGTEAL 352


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  333 bits (854), Expect = 1e-88
 Identities = 173/313 (55%), Positives = 205/313 (65%), Gaps = 3/313 (0%)
 Frame = +2

Query: 56  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 235
           T+SS   + N P T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 236 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 415
           WLIAVNKP GIYCE+VL++V  L+     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 416 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 595
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 596 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 766
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 767 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 946
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 947 IHAPLPLWASEEL 985
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  333 bits (854), Expect = 1e-88
 Identities = 173/313 (55%), Positives = 205/313 (65%), Gaps = 3/313 (0%)
 Frame = +2

Query: 56  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 235
           T+SS   + N P T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 236 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 415
           WLIAVNKP GIYCE+VL++V  L+     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 416 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 595
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 596 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 766
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 767 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 946
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 947 IHAPLPLWASEEL 985
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  332 bits (852), Expect = 2e-88
 Identities = 167/254 (65%), Positives = 190/254 (74%), Gaps = 2/254 (0%)
 Frame = +2

Query: 218 VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 397
           V+FEDEW+IAVNKP GIYCESVLSS+  L++ D G       A + ELHL+NRLDRDTSG
Sbjct: 84  VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 135

Query: 398 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 577
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 136 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 195

Query: 578 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 751
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 196 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKDEDVVIVQEKSVIGCDLKKDE 255

Query: 752 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 931
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK   Y+ HELHAESLSFEHP+T
Sbjct: 256 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPIT 315

Query: 932 GQSVLIHAPLPLWA 973
           G+ +L+ APLP WA
Sbjct: 316 GKPMLLQAPLPSWA 329


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
           gi|557088941|gb|ESQ29721.1| hypothetical protein
           EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score =  330 bits (846), Expect = 8e-88
 Identities = 161/255 (63%), Positives = 190/255 (74%)
 Frame = +2

Query: 212 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 391
           NDVL+EDEWL+AVNKP GIYCESVLSS           VI +  +   E HL+NRLDRDT
Sbjct: 84  NDVLYEDEWLMAVNKPKGIYCESVLSSAP--------KVIVDSSSTANEFHLANRLDRDT 135

Query: 392 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 571
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W KI ++SGHGRSKHGAWRVY
Sbjct: 136 SGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVY 195

Query: 572 AISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXXXXXXXXXXX 751
           A  D GR LPGGSFVRDMET FEV+SVNG+     +E                       
Sbjct: 196 AALDVGRVLPGGSFVRDMETTFEVVSVNGE----KTEPLEVESVIVVEGEPGLSCVGDDV 251

Query: 752 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 931
           V+VRA+PRSGRTHQIRLHC+YLGIPIRGDVKY G+YEW+ R +EGHELHAESLSF+HPVT
Sbjct: 252 VVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVT 311

Query: 932 GQSVLIHAPLPLWAS 976
           G+ ++I APLP W +
Sbjct: 312 GEPIVIRAPLPCWVA 326


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508719746|gb|EOY11643.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  329 bits (844), Expect = 1e-87
 Identities = 168/263 (63%), Positives = 194/263 (73%), Gaps = 5/263 (1%)
 Frame = +2

Query: 212 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGS--VIPEEQAKLQELHLSNRLDR 385
           +D+L+EDEWLIAVNKP GIYC+SVL+S+   +S    S  +    QA   ELHL+NRLDR
Sbjct: 46  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 105

Query: 386 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 565
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 106 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 165

Query: 566 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 736
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 166 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 225

Query: 737 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 916
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 226 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 285

Query: 917 EHPVTGQSVLIHAPLPLWASEEL 985
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 286 QHPVTGFPVMIQAPLPLWASQAL 308


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508719745|gb|EOY11642.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  329 bits (844), Expect = 1e-87
 Identities = 168/263 (63%), Positives = 194/263 (73%), Gaps = 5/263 (1%)
 Frame = +2

Query: 212 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGS--VIPEEQAKLQELHLSNRLDR 385
           +D+L+EDEWLIAVNKP GIYC+SVL+S+   +S    S  +    QA   ELHL+NRLDR
Sbjct: 78  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 137

Query: 386 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 565
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 138 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 197

Query: 566 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 736
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 198 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 257

Query: 737 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 916
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 258 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 317

Query: 917 EHPVTGQSVLIHAPLPLWASEEL 985
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 318 QHPVTGFPVMIQAPLPLWASQAL 340


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  326 bits (836), Expect = 1e-86
 Identities = 170/304 (55%), Positives = 199/304 (65%), Gaps = 3/304 (0%)
 Frame = +2

Query: 77  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 256
           S+NA  T  +Y            K+VE                  ND +FEDE L+AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 257 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 436
           P GIYCESV  SVR ++S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 437 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 616
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 617 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 787
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 788 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 967
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLPM 311

Query: 968 WASE 979
           WAS+
Sbjct: 312 WASQ 315


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  326 bits (835), Expect = 2e-86
 Identities = 170/304 (55%), Positives = 199/304 (65%), Gaps = 3/304 (0%)
 Frame = +2

Query: 77  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 256
           S+NA  T  +Y            K+VE                  ND +FEDE L+AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 257 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 436
           P GIYCESV  SVR ++S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 437 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 616
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 617 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 787
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 788 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 967
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPM 311

Query: 968 WASE 979
           WAS+
Sbjct: 312 WASQ 315


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
           vesca]
          Length = 347

 Score =  326 bits (835), Expect = 2e-86
 Identities = 167/312 (53%), Positives = 199/312 (63%), Gaps = 4/312 (1%)
 Frame = +2

Query: 56  TNSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 235
           T S    S+NA     +Y            KN+E                  NDV++ED+
Sbjct: 35  TMSDQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQ 94

Query: 236 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 415
           WLI VNKP GIYCE+VL SV  L++          + K  E+HL+NRLDRDTSGV ++TK
Sbjct: 95  WLIVVNKPQGIYCETVLESVPKLLAESG------LEGKAPEIHLANRLDRDTSGVMIITK 148

Query: 416 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 595
           SHKVAAKLVKAFTDH V KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GR 
Sbjct: 149 SHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRP 208

Query: 596 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK----NGXXXXXXXXXXXXXXXXXXXXVLVR 763
           LPGGS VRDMET FE+LS+NG+GC     +    +                     +LV 
Sbjct: 209 LPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVI 268

Query: 764 AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 943
           A PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEWK   Y GHELHAES+S +HP+TG  +
Sbjct: 269 ARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPI 328

Query: 944 LIHAPLPLWASE 979
           L  APLP WA++
Sbjct: 329 LFRAPLPSWANQ 340


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
           gi|355480262|gb|AES61465.1| Lon protease-like protein
           [Medicago truncatula]
          Length = 1262

 Score =  318 bits (814), Expect = 4e-84
 Identities = 168/316 (53%), Positives = 202/316 (63%), Gaps = 5/316 (1%)
 Frame = +2

Query: 59  NSSPVQSENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEW 238
           +S P  SEN P  L +Y            K +E                    +++EDE+
Sbjct: 2   SSPPHLSENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEY 61

Query: 239 LIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKS 418
           L+AVNKP GIYC++VL+S+++   S  GS          ELHL+NRLDRDTSGV ++TKS
Sbjct: 62  LLAVNKPQGIYCDNVLTSLQS--QSTVGS----------ELHLANRLDRDTSGVMLITKS 109

Query: 419 HKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTL 598
           HK+A+KLVKAFTD  VKKTY+A C G VP W  I +KSGHGRSK GAWRVY  SD+GR L
Sbjct: 110 HKIASKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGL 169

Query: 599 PGGSFVRDMETYFEVLSVNGKG-----CSLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVR 763
           PGGS VR+MET FE LSVNGKG       LG E+                      ++VR
Sbjct: 170 PGGSVVREMETSFEFLSVNGKGGFREVTELGFEEGN--VVVVEEKAVKMEGDDENEIVVR 227

Query: 764 AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 943
           AYPRSGRTHQIRLHCQYLGI I GDVKY+GVYEWK RVY+GH LHAE+LSF+HPVTG  V
Sbjct: 228 AYPRSGRTHQIRLHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRV 287

Query: 944 LIHAPLPLWASEELAK 991
           +  APLP WA++ L +
Sbjct: 288 MFRAPLPQWANQALLR 303



 Score =  101 bits (252), Expect = 6e-19
 Identities = 71/210 (33%), Positives = 97/210 (46%)
 Frame = +2

Query: 365  LSNRLDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGR 544
            L + + R T  V ++ KSHKVA+KLVKAFTDH V+KTY++LC G  P W+ I ++S +GR
Sbjct: 927  LQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGR 985

Query: 545  SKHGAWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXX 724
            SK G  RVY             F+   E  FEV              +G           
Sbjct: 986  SKFGTRRVYV------------FLEVAELGFEV-------------SDG----------- 1009

Query: 725  XXXXXXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAE 904
                       V    ++ +   I+ HCQYLGI I GDVKY+G                 
Sbjct: 1010 -----------VVVEEKAVKMEGIQFHCQYLGISIIGDVKYEG----------------- 1041

Query: 905  SLSFEHPVTGQSVLIHAPLPLWASEELAKV 994
               F+H VTG  V++ A LP W ++ L+ +
Sbjct: 1042 ---FDHLVTGVRVMLCASLPQWVNQVLSNM 1068


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  317 bits (813), Expect = 5e-84
 Identities = 163/306 (53%), Positives = 197/306 (64%), Gaps = 3/306 (0%)
 Frame = +2

Query: 77  SENAPPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 256
           S++AP  L +Y            K++E                  +D+LFED+WL+AVNK
Sbjct: 44  SKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNK 103

Query: 257 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 436
           P G+YCE++L SV  ++    G          + LHL+NRLDRDTSGV V+TKSH+VAAK
Sbjct: 104 PQGVYCETILLSVSRMLDDSDG------HDSCRSLHLANRLDRDTSGVMVITKSHQVAAK 157

Query: 437 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 616
           L+KAF+D  V KTYLALC+G+ P W+KI IKSGHGRSK GAWRVYA SD GR LP    +
Sbjct: 158 LMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAI 217

Query: 617 RDMETYFEVLSVNGKGCSL---GSEKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 787
           +DM T FEVLSVNG+G       S K                      +LVRA+PRSGRT
Sbjct: 218 KDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRT 277

Query: 788 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 967
           HQIRLHCQYLGI IRGDVKY+GV+EWK ++Y+GHELHAESLSFEHPVTG  V   APLP 
Sbjct: 278 HQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPS 337

Query: 968 WASEEL 985
           WA + L
Sbjct: 338 WAVQAL 343


>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
          Length = 293

 Score =  315 bits (808), Expect = 2e-83
 Identities = 154/258 (59%), Positives = 185/258 (71%), Gaps = 3/258 (1%)
 Frame = +2

Query: 212 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 391
           +D+L+EDE+L+AVNKP G+YCE+VL S   ++                E HL+NRLDRDT
Sbjct: 46  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 94

Query: 392 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 571
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 95  SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 154

Query: 572 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 742
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 155 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 213

Query: 743 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 922
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 214 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 273

Query: 923 PVTGQSVLIHAPLPLWAS 976
           PVTG S++I APLP WA+
Sbjct: 274 PVTGDSIVIRAPLPYWAA 291


>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
           gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
           pseudouridine synthase 1; AltName: Full=RNA
           pseudouridylate synthase 1; AltName: Full=RNA-uridine
           isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
           [Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
           [Arabidopsis thaliana]
          Length = 322

 Score =  315 bits (808), Expect = 2e-83
 Identities = 154/258 (59%), Positives = 185/258 (71%), Gaps = 3/258 (1%)
 Frame = +2

Query: 212 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 391
           +D+L+EDE+L+AVNKP G+YCE+VL S   ++                E HL+NRLDRDT
Sbjct: 75  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 123

Query: 392 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 571
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 124 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 183

Query: 572 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 742
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 184 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 242

Query: 743 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 922
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 243 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 302

Query: 923 PVTGQSVLIHAPLPLWAS 976
           PVTG S++I APLP WA+
Sbjct: 303 PVTGDSIVIRAPLPYWAA 320