BLASTX nr result

ID: Mentha27_contig00019145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00019145
         (625 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    60   5e-07
ref|XP_007011146.1| F-box and associated interaction domains-con...    58   3e-06
ref|XP_007011145.1| F-box and associated interaction domains-con...    58   3e-06
ref|XP_007011149.1| F-box and associated interaction domains-con...    57   5e-06
ref|XP_007011148.1| F-box and associated interaction domains-con...    57   5e-06
ref|XP_007011147.1| F-box and associated interaction domains-con...    57   5e-06

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590586605|ref|XP_007015751.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
 Frame = -1

Query: 457 HCLSFLSLQ--EPYAIANEDFDLPFHKD---KSVDGMSCRGLLYFHDSEGNSVICNLTTR 293
           H  S LS +  E +++  E+  LPF ++     V    C GLL  HD+ G + + N +TR
Sbjct: 75  HYFSALSTEKGENFSVT-ENIHLPFFENCWYAPVVSGPCNGLLCLHDA-GKAALWNPSTR 132

Query: 292 EIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVLRIFSQTISEENESGYVCFYGST 119
           E K           S+  T FG  G G+D+  +D+KV+R  +    E  E G +  +   
Sbjct: 133 EFKILPRSSVNRPPSVDSTSFGCLGFGFDSITDDYKVVRFVTNYFDENEEEGGLADW--I 190

Query: 118 EYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCYW 2
              +LYSL  DSWK I   +A  +          G  YW
Sbjct: 191 HQVELYSLKSDSWKEISVPEAHPYASPLFNNYVNGSYYW 229


>ref|XP_007011146.1| F-box and associated interaction domains-containing protein isoform
           2 [Theobroma cacao] gi|508728059|gb|EOY19956.1| F-box
           and associated interaction domains-containing protein
           isoform 2 [Theobroma cacao]
          Length = 400

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 CRGLLYFHDSEGNSVICNLTTREIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVL 185
           C GLL  HD+  + ++ N +TRE+K           +   T FG  G G+D +  D+KVL
Sbjct: 109 CNGLLCVHDNY-SIILWNPSTREVKVLPESTISRPPATDDTYFGFVGFGFDRNSNDYKVL 167

Query: 184 RIFSQTISEENESGYVCFYGSTEYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCY 5
           R  +  + EE+    + F    +   LYSL  DSW+ I + D F++          G  Y
Sbjct: 168 RCVNNCVLEEDGFAVLEFIYQID---LYSLRTDSWREIAHPDVFVYNPYLFNAYINGIYY 224

Query: 4   W 2
           W
Sbjct: 225 W 225


>ref|XP_007011145.1| F-box and associated interaction domains-containing protein isoform
           1 [Theobroma cacao] gi|508728058|gb|EOY19955.1| F-box
           and associated interaction domains-containing protein
           isoform 1 [Theobroma cacao]
          Length = 467

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 CRGLLYFHDSEGNSVICNLTTREIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVL 185
           C GLL  HD+  + ++ N +TRE+K           +   T FG  G G+D +  D+KVL
Sbjct: 109 CNGLLCVHDNY-SIILWNPSTREVKVLPESTISRPPATDDTYFGFVGFGFDRNSNDYKVL 167

Query: 184 RIFSQTISEENESGYVCFYGSTEYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCY 5
           R  +  + EE+    + F    +   LYSL  DSW+ I + D F++          G  Y
Sbjct: 168 RCVNNCVLEEDGFAVLEFIYQID---LYSLRTDSWREIAHPDVFVYNPYLFNAYINGIYY 224

Query: 4   W 2
           W
Sbjct: 225 W 225


>ref|XP_007011149.1| F-box and associated interaction domains-containing protein isoform
           3 [Theobroma cacao] gi|508728062|gb|EOY19959.1| F-box
           and associated interaction domains-containing protein
           isoform 3 [Theobroma cacao]
          Length = 400

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 CRGLLYFHDSEGNSVICNLTTREIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVL 185
           C GLL  HD+  + ++ N +TRE+K           +   T FG  G G+D +  D+KVL
Sbjct: 109 CNGLLCVHDNY-SIILWNPSTREVKVLPESTISRPPATDDTYFGFVGFGFDRNSNDYKVL 167

Query: 184 RIFSQTISEENESGYVCFYGSTEYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCY 5
           R  +  + EE+    + F    +   LYSL  DSW+ I + D F++          G  Y
Sbjct: 168 RCVNNCVLEEDGFAVLEFIYQID---LYSLRTDSWREIAHPDVFVYDPYLFNAYINGIYY 224

Query: 4   W 2
           W
Sbjct: 225 W 225


>ref|XP_007011148.1| F-box and associated interaction domains-containing protein isoform
           2 [Theobroma cacao] gi|508728061|gb|EOY19958.1| F-box
           and associated interaction domains-containing protein
           isoform 2 [Theobroma cacao]
          Length = 379

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 CRGLLYFHDSEGNSVICNLTTREIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVL 185
           C GLL  HD+  + ++ N +TRE+K           +   T FG  G G+D +  D+KVL
Sbjct: 109 CNGLLCVHDNY-SIILWNPSTREVKVLPESTISRPPATDDTYFGFVGFGFDRNSNDYKVL 167

Query: 184 RIFSQTISEENESGYVCFYGSTEYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCY 5
           R  +  + EE+    + F    +   LYSL  DSW+ I + D F++          G  Y
Sbjct: 168 RCVNNCVLEEDGFAVLEFIYQID---LYSLRTDSWREIAHPDVFVYDPYLFNAYINGIYY 224

Query: 4   W 2
           W
Sbjct: 225 W 225


>ref|XP_007011147.1| F-box and associated interaction domains-containing protein isoform
           1 [Theobroma cacao] gi|508728060|gb|EOY19957.1| F-box
           and associated interaction domains-containing protein
           isoform 1 [Theobroma cacao]
          Length = 467

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 CRGLLYFHDSEGNSVICNLTTREIKXXXXXXXXXXXSM--TIFGGCGIGYDASCEDFKVL 185
           C GLL  HD+  + ++ N +TRE+K           +   T FG  G G+D +  D+KVL
Sbjct: 109 CNGLLCVHDNY-SIILWNPSTREVKVLPESTISRPPATDDTYFGFVGFGFDRNSNDYKVL 167

Query: 184 RIFSQTISEENESGYVCFYGSTEYTQLYSLNDDSWKHIPNVDAFLHRGNTVFIKETGCCY 5
           R  +  + EE+    + F    +   LYSL  DSW+ I + D F++          G  Y
Sbjct: 168 RCVNNCVLEEDGFAVLEFIYQID---LYSLRTDSWREIAHPDVFVYDPYLFNAYINGIYY 224

Query: 4   W 2
           W
Sbjct: 225 W 225


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