BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00018681
         (1169 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   462   e-128
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   462   e-128
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   371   e-100
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   367   5e-99
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   367   5e-99
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   366   1e-98
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   366   1e-98
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   366   1e-98
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   365   2e-98
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   364   3e-98
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas...   357   4e-96
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...   353   1e-94
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...   352   2e-94
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           350   9e-94
ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas...   349   1e-93
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   348   3e-93
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]       346   1e-92
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   345   2e-92
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...   344   5e-92
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   343   6e-92

>gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 422

 Score =  462 bits (1190), Expect = e-128
 Identities = 234/321 (72%), Positives = 266/321 (82%), Gaps = 2/321 (0%)
 Frame = +2

Query: 212  MLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYS 391
            MLSLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA  S SD   +S SGRPNN+S
Sbjct: 1    MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 392  GVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGD 571
            G KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD
Sbjct: 61   GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 572  MVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHC 751
             V+CTIAELQPLRAEPENIPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHC
Sbjct: 121  SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 752  RLSTVCFNPDSLPET--DDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTS 925
            RLSTVCFNP+SLP+   DDDS DE +                SE+SVRPGIVHRLDKGTS
Sbjct: 181  RLSTVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTS 227

Query: 926  GLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIAT 1105
            GLLVVAKDE SHSHL+EQFK+ T+KRVY+SLTCGVP P+SGRVD+P+GRD NNRIRM+A 
Sbjct: 228  GLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAI 287

Query: 1106 PGSSTHGRFRHAASRYKVIEI 1168
            PGS+ HG+ RHA SRYKV+EI
Sbjct: 288  PGSALHGKARHAVSRYKVVEI 308


>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 432

 Score =  462 bits (1190), Expect = e-128
 Identities = 234/321 (72%), Positives = 266/321 (82%), Gaps = 2/321 (0%)
 Frame = +2

Query: 212  MLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYS 391
            MLSLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA  S SD   +S SGRPNN+S
Sbjct: 1    MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 392  GVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGD 571
            G KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD
Sbjct: 61   GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 572  MVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHC 751
             V+CTIAELQPLRAEPENIPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHC
Sbjct: 121  SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 752  RLSTVCFNPDSLPET--DDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTS 925
            RLSTVCFNP+SLP+   DDDS DE +                SE+SVRPGIVHRLDKGTS
Sbjct: 181  RLSTVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTS 227

Query: 926  GLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIAT 1105
            GLLVVAKDE SHSHL+EQFK+ T+KRVY+SLTCGVP P+SGRVD+P+GRD NNRIRM+A 
Sbjct: 228  GLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAI 287

Query: 1106 PGSSTHGRFRHAASRYKVIEI 1168
            PGS+ HG+ RHA SRYKV+EI
Sbjct: 288  PGSALHGKARHAVSRYKVVEI 308


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
            vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
            product [Vitis vinifera]
          Length = 433

 Score =  371 bits (952), Expect = e-100
 Identities = 204/326 (62%), Positives = 241/326 (73%), Gaps = 7/326 (2%)
 Frame = +2

Query: 212  MLSLQSLSWSSV----KPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRP 379
            + SL S S+ S+    +  L+ PR+P       +       + A S+++D    S SGR 
Sbjct: 2    IFSLNSASFFSISHTSQSALLFPRNP------KSCSRVFRILRACSNSTDEPLVSVSGRR 55

Query: 380  NNYSGVKIEEKV---ELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKAS 550
             NY+GV++EE V     D GKLRLDSWI+SRI GISRARVQSSIRSGLVSVN R+++K S
Sbjct: 56   TNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVS 115

Query: 551  HMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLV 730
            H++R GD V+CTI+ELQPLRAEPE+IPLDIVYEDE+V+VVNKPAHMVVHPAPGNA+GTLV
Sbjct: 116  HVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLV 175

Query: 731  NGILHHCRLSTVCFNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRL 910
            NGILHHC L TV   P+   E DD S DE ++ +       G   G  E ++RPGIVHRL
Sbjct: 176  NGILHHCSLPTVAL-PNRDSEEDDISDDEFNSFA------AGQNCGTCETNIRPGIVHRL 228

Query: 911  DKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRI 1090
            DKGTSGLLVVAKDE SH+HLSEQFK  +I RVYISLT GVP PLSGRV++PVGRD NNRI
Sbjct: 229  DKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRI 288

Query: 1091 RMIATPGSSTHGRFRHAASRYKVIEI 1168
            RM A PG S  G+ RHAASRYKVIEI
Sbjct: 289  RMTAVPGPSNSGQARHAASRYKVIEI 314


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508723228|gb|EOY15125.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  367 bits (942), Expect = 5e-99
 Identities = 201/331 (60%), Positives = 245/331 (74%), Gaps = 3/331 (0%)
 Frame = +2

Query: 185  LVSSFSVMKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNES 364
            +VSS+S     S ++   S    + ++PR P L P T +    A + P++  A+    ++
Sbjct: 1    MVSSYSCCPFPSTKAFQISP-SFVFLSPRYPKLLPFTLSGILRARARPSSGCAA----KT 55

Query: 365  SSGRPNNYSGVKIEEKVE-LDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVIN 541
                  +Y+GV++EE V+    GKLRLDSWI+SRI GISRARVQSSI+SGLV+VNGRV++
Sbjct: 56   QEPIRTSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVD 115

Query: 542  KASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATG 721
            K SH +R GD V+C I+ELQPLRAEPE+IPLDIVYED++V+VVNKP HMVVHPAPGNATG
Sbjct: 116  KVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATG 175

Query: 722  TLVNGILHHCRLSTVCFN-PDSLPETDDDSGDEISALSLDQGHDGGIGFGLS-EASVRPG 895
            TLVNGILHHC L TV  +  + L +T+D S D           D G  +G S  ASVRPG
Sbjct: 176  TLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-----------DEGFCYGASAAASVRPG 224

Query: 896  IVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRD 1075
            IVHRLDKGTSGLLVVAKDE SHSHLSEQFK+ TI+RVYISLTCGVP P +GRVD+ +GRD
Sbjct: 225  IVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRD 284

Query: 1076 VNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
             NNR+RMIA PG + HGR RHAASRYKVIE+
Sbjct: 285  SNNRVRMIAVPGLNHHGRARHAASRYKVIEV 315


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
            lycopersicum]
          Length = 436

 Score =  367 bits (942), Expect = 5e-99
 Identities = 193/314 (61%), Positives = 239/314 (76%), Gaps = 1/314 (0%)
 Frame = +2

Query: 227  SLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYSGVKIE 406
            +L+ +S   L  NP+   L  +++         P  S + D  +E   GR +NYSGVK+E
Sbjct: 3    ALNTTSFSLLPQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIP-GRRSNYSGVKLE 61

Query: 407  EKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCT 586
            E V+   GKLRLDSW++SRI+G+SRARVQSSIRSGLVSVNGRV +K SHMV+ GD VDCT
Sbjct: 62   ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121

Query: 587  IAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTV 766
            IA+L+PLRAEPE+IPLDIVYEDE+V+VVNKPAHMVVHPAPGNATGTLV+GILHHC L TV
Sbjct: 122  IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181

Query: 767  CF-NPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVA 943
             F   + L + +D S DE++  S ++  +      + E+SVRPGIVHRLDKGTSGLLVVA
Sbjct: 182  SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241

Query: 944  KDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATPGSSTH 1123
            K+E S + L+EQFK+ TIKRVY+S+TCGVP  ++GRVD+P+GRD NNRIRM A PG+   
Sbjct: 242  KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301

Query: 1124 GRFRHAASRYKVIE 1165
            G+ RHA SRYKVIE
Sbjct: 302  GKSRHAVSRYKVIE 315


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum
            tuberosum]
          Length = 431

 Score =  366 bits (939), Expect = 1e-98
 Identities = 193/319 (60%), Positives = 242/319 (75%), Gaps = 1/319 (0%)
 Frame = +2

Query: 212  MLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYS 391
            ML+L + S+S +     NP+   L  +++         P  S + D  +E   GR +NYS
Sbjct: 1    MLALNTTSFSLLPQ---NPKPFSLSRVSSFICRAFTKFPGDSDSDDSPDEIP-GRRSNYS 56

Query: 392  GVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGD 571
            GVK+EE V+   GKLRLDSW++SRI+G+SRARVQSSIRSGLVSVNGRV +K SHMV+ GD
Sbjct: 57   GVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGD 116

Query: 572  MVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHC 751
             VDCTIA+L+PLRAEPE+IPLDIV+EDE+V+VVNKPAHMVVHPAPGNATGTLV+GILHHC
Sbjct: 117  KVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHC 176

Query: 752  RLSTVCF-NPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSG 928
             L T+ F   + L + +D S DE++  S ++  +      + E+SVRPGIVHRLDKGTSG
Sbjct: 177  SLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHRLDKGTSG 236

Query: 929  LLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATP 1108
            LLVVAK+E S + L+EQFK+ TIKRVY+S+TCGVP  ++GRVD+P+GRD NNRIRM A P
Sbjct: 237  LLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIP 296

Query: 1109 GSSTHGRFRHAASRYKVIE 1165
            G+   G+ RHA SRYKVIE
Sbjct: 297  GTPKSGKSRHAVSRYKVIE 315


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
            gi|557537377|gb|ESR48495.1| hypothetical protein
            CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  366 bits (939), Expect = 1e-98
 Identities = 202/322 (62%), Positives = 235/322 (72%), Gaps = 1/322 (0%)
 Frame = +2

Query: 206  MKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNN 385
            M MLSL S SW S         SP   P        A     +SS+S G N        N
Sbjct: 1    MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRAR---CSSSSSGGNNREPIA---N 54

Query: 386  YSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRL 565
            Y+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVSVNG+V++K SH V+ 
Sbjct: 55   YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKG 114

Query: 566  GDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILH 745
            GDMV+CTI+ELQPLRAE E+IPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNGILH
Sbjct: 115  GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 746  HCRLSTVC-FNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGT 922
            HC L T+   N ++  + +D S DE  + S            +S AS+RPGIVHRLDKGT
Sbjct: 175  HCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISGASIRPGIVHRLDKGT 222

Query: 923  SGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIA 1102
            SGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR++VP+ RD NNRIRM A
Sbjct: 223  SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 1103 TPGSSTHGRFRHAASRYKVIEI 1168
             PGS+ HG+ RHAASRYKVIEI
Sbjct: 283  IPGSNKHGQARHAASRYKVIEI 304


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
            gi|557537376|gb|ESR48494.1| hypothetical protein
            CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  366 bits (939), Expect = 1e-98
 Identities = 202/322 (62%), Positives = 235/322 (72%), Gaps = 1/322 (0%)
 Frame = +2

Query: 206  MKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNN 385
            M MLSL S SW S         SP   P        A     +SS+S G N        N
Sbjct: 1    MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRAR---CSSSSSGGNNREPIA---N 54

Query: 386  YSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRL 565
            Y+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVSVNG+V++K SH V+ 
Sbjct: 55   YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKG 114

Query: 566  GDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILH 745
            GDMV+CTI+ELQPLRAE E+IPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNGILH
Sbjct: 115  GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 746  HCRLSTVC-FNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGT 922
            HC L T+   N ++  + +D S DE  + S            +S AS+RPGIVHRLDKGT
Sbjct: 175  HCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISGASIRPGIVHRLDKGT 222

Query: 923  SGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIA 1102
            SGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR++VP+ RD NNRIRM A
Sbjct: 223  SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 1103 TPGSSTHGRFRHAASRYKVIEI 1168
             PGS+ HG+ RHAASRYKVIEI
Sbjct: 283  IPGSNKHGQARHAASRYKVIEI 304


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
            sinensis]
          Length = 421

 Score =  365 bits (938), Expect = 2e-98
 Identities = 201/322 (62%), Positives = 235/322 (72%), Gaps = 1/322 (0%)
 Frame = +2

Query: 206  MKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNN 385
            M MLSL S SW S         SP   P        A     +SS+S G N        N
Sbjct: 1    MTMLSLNSASWGSASCTKGLQFSPTKIPFGVFKILRAR---CSSSSSGGNNREPIA---N 54

Query: 386  YSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRL 565
            Y+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVS+NG+V++K SH V+ 
Sbjct: 55   YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVKG 114

Query: 566  GDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILH 745
            GDMV+CTI+ELQPLRAE E+IPLDIVYED+NV+VVNKPAHMVVHPAPGNATGTLVNGILH
Sbjct: 115  GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 746  HCRLSTVC-FNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGT 922
            HC L T+   N ++  + +D S DE  + S            +S AS+RPGIVHRLDKGT
Sbjct: 175  HCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISGASIRPGIVHRLDKGT 222

Query: 923  SGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIA 1102
            SGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR++VP+ RD NNRIRM A
Sbjct: 223  SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 1103 TPGSSTHGRFRHAASRYKVIEI 1168
             PGS+ HG+ RHAASRYKVIEI
Sbjct: 283  IPGSNKHGQARHAASRYKVIEI 304


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
            gi|222843675|gb|EEE81222.1| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 444

 Score =  364 bits (935), Expect = 3e-98
 Identities = 199/320 (62%), Positives = 234/320 (73%)
 Frame = +2

Query: 209  KMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNY 388
            +MLS+ S+S  S     ++ +    R LT  +          SS  +  +  + G+  NY
Sbjct: 29   RMLSISSVSRCSAPSFFLSQKPTASRLLTVHS----------SSTREPNSNQNPGQRINY 78

Query: 389  SGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLG 568
            SGVK+EE V+   GK RLDSWI+SRI+GISRARVQSSI+SGLVSVNG+VI+K SH V+ G
Sbjct: 79   SGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAG 138

Query: 569  DMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHH 748
            D V+C I+ELQPLRAEPENIPLDIVYEDENV+VVNKPAHMVVHPAPGNATGTLVNGILHH
Sbjct: 139  DKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHH 198

Query: 749  CRLSTVCFNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSG 928
            C L TV  + + L   +D S D+          D G+      ASVRPGIVHRLDKGTSG
Sbjct: 199  CSLPTVS-SQEVLSGAEDVSDDD----------DEGLCSSSYAASVRPGIVHRLDKGTSG 247

Query: 929  LLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATP 1108
            LLVVAKDE SH+HLSEQFK  TIKRVY+SLTCGVP P++GR+DVP+GRDV+NRIRM A  
Sbjct: 248  LLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIV 307

Query: 1109 GSSTHGRFRHAASRYKVIEI 1168
                 G+ RHAASRYKVIEI
Sbjct: 308  -EPNRGQARHAASRYKVIEI 326


>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
            gi|561009207|gb|ESW08114.1| hypothetical protein
            PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score =  357 bits (917), Expect = 4e-96
 Identities = 189/301 (62%), Positives = 226/301 (75%), Gaps = 2/301 (0%)
 Frame = +2

Query: 272  SPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYSGVKIEEKVELDCG--KLRLD 445
            SP    L AT++ + ++I +A S   G ++S   R  N+SG+++EE V+   G  KLRLD
Sbjct: 25   SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 446  SWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEN 625
            SWI+SRINGISRARVQSSI+SGLV VNGRV++KAS  V+ GD + CTIAELQ LRA PEN
Sbjct: 85   SWISSRINGISRARVQSSIKSGLVHVNGRVVDKASFNVKAGDQIKCTIAELQKLRAVPEN 144

Query: 626  IPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFNPDSLPETDDD 805
            IPLDIVYEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V F+ +      +D
Sbjct: 145  IPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTED 204

Query: 806  SGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFK 985
              DE+++         G     S +S+RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK
Sbjct: 205  CDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFK 264

Query: 986  ERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIE 1165
            +RTIKRVY+SLT GVP P+SGRVDVPVGRD+NNR+RM A  G     + RHAASRYKVIE
Sbjct: 265  QRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKARHAASRYKVIE 324

Query: 1166 I 1168
            I
Sbjct: 325  I 325


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
            arietinum]
          Length = 438

 Score =  353 bits (905), Expect = 1e-94
 Identities = 187/283 (66%), Positives = 219/283 (77%), Gaps = 3/283 (1%)
 Frame = +2

Query: 329  AASSASDGFNESSSGRP-NNYSGVKIEEKV--ELDCGKLRLDSWIASRINGISRARVQSS 499
            A S  +D  N  S+G P +NY+GV++EE V  E+  GKLRLD+WI+SRINGISRARVQSS
Sbjct: 46   AVSGLADDSN--SNGEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSS 103

Query: 500  IRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKP 679
            I++GLV VNGR+++K S  VR GD + CTIAELQ LRA PENIPLDIVYEDE+++V+NKP
Sbjct: 104  IKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKP 163

Query: 680  AHMVVHPAPGNATGTLVNGILHHCRLSTVCFNPDSLPETDDDSGDEISALSLDQGHDGGI 859
            AHMVVHPAPGN +GTLVNGILHHC L  V F+ D      +DS DE++  +       G+
Sbjct: 164  AHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGL 223

Query: 860  GFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGP 1039
               LS AS+RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK RTIKRVYISLT GVP P
Sbjct: 224  DSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTP 283

Query: 1040 LSGRVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
            ++GRV+VPVGRD NNR+RM A  G  T  + RHAASRYKVIEI
Sbjct: 284  VAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEI 326


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
            X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
            PREDICTED: RNA pseudouridine synthase 2,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score =  352 bits (902), Expect = 2e-94
 Identities = 185/297 (62%), Positives = 227/297 (76%), Gaps = 4/297 (1%)
 Frame = +2

Query: 290  LTATTHAYANSIPAASSASDGFNESSSGRPNNYSGVKIEEKVE--LDCGKLRLDSWIASR 463
            L+AT++ + ++  +A+S S G ++S      N+SGV++EE V+  +  GKLRLD+WI+SR
Sbjct: 32   LSATSYKFRSATASAASGSAGDSDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSR 91

Query: 464  INGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIV 643
            INGISRARVQSSI+SGLV VNGRV++K S  V+ GD + CTIAELQ LRA P+NIPLDIV
Sbjct: 92   INGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIV 151

Query: 644  YEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFNPDSLPETDDDSGDEI- 820
            YEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V F+ D      +DS DE  
Sbjct: 152  YEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFN 211

Query: 821  SALSLDQGHDG-GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTI 997
            S +SL    +G      ++  S+RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK+RTI
Sbjct: 212  SYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTI 271

Query: 998  KRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
            KR+Y+SLT GVP P++GRV+VPVGRD NNRIRM A  G     + R+AASRYKVIEI
Sbjct: 272  KRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIEI 328


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  350 bits (897), Expect = 9e-94
 Identities = 193/337 (57%), Positives = 238/337 (70%), Gaps = 18/337 (5%)
 Frame = +2

Query: 212  MLSLQSLSWSSVKPLLINPR------SPYLRPLTATTHAY-----------ANSIPAASS 340
            MLSL  LS SS K  L +P        P  R   +++ ++           A S    +S
Sbjct: 1    MLSLSGLS-SSTKAFLSSPSLFLFFLPPNPRISASSSFSFQSPPRIPISFRAGSSFTGAS 59

Query: 341  ASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVS 520
             SD   E  +G   N++GV++E  V +D GK+RLDSWI+SR++GISRARVQSSIR GLV 
Sbjct: 60   ISDRNEEVLAGVRPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLVR 119

Query: 521  VNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHP 700
            VNG+V++K S  V+ GD +DCTI+ELQPL+AE E+IPL+IV+ED++V+VVNKP HMVVHP
Sbjct: 120  VNGQVVDKVSQNVKTGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVHP 179

Query: 701  APGNATGTLVNGILHHCRLSTVCF-NPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSE 877
            APGNA GTLVNGILHHC L T+ F + +SL + +D   DE   +S+D          +S 
Sbjct: 180  APGNAKGTLVNGILHHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMDA--------SISG 231

Query: 878  ASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVD 1057
            ASVRPGIVHRLDKGTSGLLVVAKDE SH+HLSEQFK  TI RVY+SLT GVP  LSG ++
Sbjct: 232  ASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIHRVYVSLTSGVPSQLSGHIE 291

Query: 1058 VPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
            VP+GRD NNRIRM A PG++   R RHAASRYKVIEI
Sbjct: 292  VPIGRDPNNRIRMAAIPGATNSKRARHAASRYKVIEI 328


>ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
            gi|561009206|gb|ESW08113.1| hypothetical protein
            PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 458

 Score =  349 bits (895), Expect = 1e-93
 Identities = 189/312 (60%), Positives = 226/312 (72%), Gaps = 13/312 (4%)
 Frame = +2

Query: 272  SPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNYSGVKIEEKVELDCG--KLRLD 445
            SP    L AT++ + ++I +A S   G ++S   R  N+SG+++EE V+   G  KLRLD
Sbjct: 25   SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 446  SWIASRINGISRARVQSSIRSGLVSVNGRVINK-----------ASHMVRLGDMVDCTIA 592
            SWI+SRINGISRARVQSSI+SGLV VNGRV++K           AS  V+ GD + CTIA
Sbjct: 85   SWISSRINGISRARVQSSIKSGLVHVNGRVVDKKSKHQPEQYALASFNVKAGDQIKCTIA 144

Query: 593  ELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCF 772
            ELQ LRA PENIPLDIVYEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V F
Sbjct: 145  ELQKLRAVPENIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEF 204

Query: 773  NPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDE 952
            + +      +D  DE+++         G     S +S+RPGIVHRLDKGTSGLLVVAKDE
Sbjct: 205  SKEEGLSDTEDCDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDE 264

Query: 953  QSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIATPGSSTHGRF 1132
             SH  LSEQFK+RTIKRVY+SLT GVP P+SGRVDVPVGRD+NNR+RM A  G     + 
Sbjct: 265  HSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKA 324

Query: 1133 RHAASRYKVIEI 1168
            RHAASRYKVIEI
Sbjct: 325  RHAASRYKVIEI 336


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 399

 Score =  348 bits (892), Expect = 3e-93
 Identities = 190/331 (57%), Positives = 230/331 (69%), Gaps = 4/331 (1%)
 Frame = +2

Query: 185  LVSSFSVMKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASDGFNES 364
            +V  +SV     +QS S  S+     NPR  +               P   S S  F   
Sbjct: 1    MVGLYSVTLCCCIQSSSSLSLPFFSTNPRRLF---------------PCNISLSRIFTIR 45

Query: 365  SSGRPNNYSGVKIEEKVEL---DCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRV 535
            S     NY G+++EE V++      KLRLDSWI+SRI+GISRARVQSSI+SGLVSVNGRV
Sbjct: 46   SCQNHTNYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRV 105

Query: 536  INKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNA 715
            ++K SH V+ GD V CTI+ELQPLRAEPE++PLDIVYEDE+++VVNKP HMVVHPAPGN 
Sbjct: 106  VDKVSHNVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNP 165

Query: 716  TGTLVNGILHHCRLSTVCF-NPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRP 892
            TGTLVNGILHHC L TV   + + L + +D S D+  + S              E+S+RP
Sbjct: 166  TGTLVNGILHHCNLPTVAISSQEVLSDAEDRSDDDERSYS-----------SSCESSIRP 214

Query: 893  GIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGR 1072
            GIVHRLDKGTSGLLVVAKDE +H+HLSEQFK+ TI+RVYISLT GVP  L+GR+D+P+GR
Sbjct: 215  GIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGR 274

Query: 1073 DVNNRIRMIATPGSSTHGRFRHAASRYKVIE 1165
            DVNNRIRM A PG    GR RHAASR+KV+E
Sbjct: 275  DVNNRIRMTAIPGPIKQGRARHAASRFKVVE 305


>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
          Length = 1063

 Score =  346 bits (887), Expect = 1e-92
 Identities = 185/314 (58%), Positives = 234/314 (74%), Gaps = 2/314 (0%)
 Frame = +2

Query: 212  MLSLQSLSWSSVKPL-LINPRSPYLRPLTATTHAYANSIPAASSASDGFNESSSGRPNNY 388
            + SLQ   W S KP  +I+ R+  L          +NS+  A+S SD  + + SG+   +
Sbjct: 2    LTSLQGRCWRSAKPRRVISRRNLCLLKFVTVACPRSNSLQNATSDSDSDDCAFSGQSAGH 61

Query: 389  SGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLG 568
            S ++IEE V L+  K+RLDSWI+SRI GISRARVQSSIRSG VSVNG V+NK S++VR G
Sbjct: 62   SRLRIEEAVCLESEKVRLDSWISSRIGGISRARVQSSIRSGFVSVNGSVVNKVSYLVRHG 121

Query: 569  DMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHH 748
            D+V+C++ EL+PLRAEPE+IPLDIV+EDE+++V+NKP HMVVHPAPGNA GTLVNGIL H
Sbjct: 122  DVVNCSVPELRPLRAEPEDIPLDIVHEDEHILVLNKPPHMVVHPAPGNANGTLVNGILGH 181

Query: 749  CRL-STVCFNPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTS 925
            C+L  +  F+PD   E ++DS D     SLD  H GG  F    A VRPGIVHRLDKGTS
Sbjct: 182  CQLPPSSSFSPD--VEIEEDSSDGSCIDSLDH-HTGGRFFA---ADVRPGIVHRLDKGTS 235

Query: 926  GLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSGRVDVPVGRDVNNRIRMIAT 1105
            GLLVVAKDE SHSHL+EQF++ T+KR+Y+S++CGVP P +G +DVP+GRD NNRIRM+  
Sbjct: 236  GLLVVAKDEYSHSHLAEQFQKHTVKRLYMSISCGVPSPSTGCIDVPIGRDPNNRIRMVGI 295

Query: 1106 PGSSTHGRFRHAAS 1147
            PGSS+ G+ RHA S
Sbjct: 296  PGSSSRGKARHAVS 309


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
            gi|557086678|gb|ESQ27530.1| hypothetical protein
            EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  345 bits (885), Expect = 2e-92
 Identities = 200/349 (57%), Positives = 238/349 (68%), Gaps = 17/349 (4%)
 Frame = +2

Query: 170  MAQAALVSSFSVMKMLSLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAASSASD 349
            M   + V SFS+  + SL+S S SS                ++T   + +  P  S    
Sbjct: 1    MLSISQVPSFSLTSVKSLRSPSSSS----------------SSTLSVFFSFFPKVSR--- 41

Query: 350  GFNESSSGRPN-------------NYSGVKIEEKVELDC-GKLRLDSWIASRINGISRAR 487
             F  +SSG PN             N +G+K+EE VE     K+RLDSWI+SR++G+SRAR
Sbjct: 42   -FVRASSGIPNLAACSKPESIPRVNNAGLKLEETVEAAVKAKIRLDSWISSRVHGVSRAR 100

Query: 488  VQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIV 667
            VQSSIR GLVSVNGRV++K SH V+ GD V+CTI+ELQPL+AEPE+IPLDIVYED++++V
Sbjct: 101  VQSSIRLGLVSVNGRVVDKVSHNVKAGDEVNCTISELQPLKAEPEDIPLDIVYEDKHLLV 160

Query: 668  VNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCF-NP--DSLPETDDDSGDEISALSLD 838
            VNKPAHMVVHPAPGN TGTLVNGILHHC L  V + NP  DS  ET  D  +  S+ SL 
Sbjct: 161  VNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVAYSNPEDDSDEETLSDDEEMTSSSSL- 219

Query: 839  QGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISL 1018
                         ASVRPGIVHRLDKGTSGLLVVAKDE SH+HL+EQFK  TI+RVYISL
Sbjct: 220  ------------AASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLHTIERVYISL 267

Query: 1019 TCGVPGPLSGRVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIE 1165
            T GVP P  GRVD+P+GRD NNRIRM A PGS + G+ RHAASRYKVIE
Sbjct: 268  TSGVPSPSQGRVDIPIGRDPNNRIRMAAIPGSLSRGKARHAASRYKVIE 316


>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
            brachyantha]
          Length = 442

 Score =  344 bits (882), Expect = 5e-92
 Identities = 177/280 (63%), Positives = 216/280 (77%), Gaps = 4/280 (1%)
 Frame = +2

Query: 341  ASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRING--ISRARVQSSIRSGL 514
            +SD   E++S R   + G ++EE V    G+ R+D+WI+SR+ G  +SRARVQ+SIR+GL
Sbjct: 39   SSDANAEAASSRRGGHGGTRLEEAVPAGEGRSRIDAWISSRLGGGGVSRARVQASIRAGL 98

Query: 515  VSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVNKPAHMVV 694
            V+VNGR ++K SHMV+ GDMV CT++ELQPLRAEPE+IPLDIVYED++++VVNKPAHMVV
Sbjct: 99   VAVNGRPVSKVSHMVKGGDMVSCTVSELQPLRAEPEDIPLDIVYEDQHLLVVNKPAHMVV 158

Query: 695  HPAPGNATGTLVNGILHHCRLST-VCFNPDSL-PETDDDSGDEISALSLDQGHDGGIGFG 868
            HPAPGNA GTLVN ILHHC++ST  C   +S   E  D S D+I    +DQ   G +   
Sbjct: 159  HPAPGNANGTLVNAILHHCKISTFTCLARNSTDDECPDSSDDDIDVFHVDQFTTGEVSSE 218

Query: 869  LSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVPGPLSG 1048
            + EA VRPGIVHRLDKGTSGLLVVAKDE SH+ L+EQFK  TI+RVYISLTCG P P SG
Sbjct: 219  VREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSG 278

Query: 1049 RVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
            R++VP+ RD NNRIRMIATPGS  H   RHAASRYKV E+
Sbjct: 279  RIEVPIARDPNNRIRMIATPGSG-HRYARHAASRYKVREV 317


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
            sativus]
          Length = 453

 Score =  343 bits (881), Expect = 6e-92
 Identities = 176/285 (61%), Positives = 219/285 (76%)
 Frame = +2

Query: 314  ANSIPAASSASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQ 493
            +N     SS  D ++E+ S R  NY+G ++EE V+++ GK+RLDSWI+ RINGISRARVQ
Sbjct: 37   SNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQ 96

Query: 494  SSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPENIPLDIVYEDENVIVVN 673
            SSIR+GLVSVNGRVI+K SH V+ GD+++CTI+ELQPLRAEPE+I LDIVYEDE+V+VVN
Sbjct: 97   SSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVN 156

Query: 674  KPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFNPDSLPETDDDSGDEISALSLDQGHDG 853
            KPAHMVVHPAPGNATGTLVN IL+HC L  V  +        D S DE S++        
Sbjct: 157  KPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSI-------- 208

Query: 854  GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKERTIKRVYISLTCGVP 1033
            G+   +SEA +RPGIVHRLDKGTSGLLVVAKDE SH+HLS QFK+ +I+RVYISLTCGVP
Sbjct: 209  GVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 268

Query: 1034 GPLSGRVDVPVGRDVNNRIRMIATPGSSTHGRFRHAASRYKVIEI 1168
               +GR+++P+ RD NNRIRM A  G+  +   ++AASRY V+EI
Sbjct: 269  PSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEI 313