BLASTX nr result

ID: Mentha27_contig00018014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00018014
         (252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus...    70   2e-10
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    62   1e-07
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    60   4e-07
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise...    59   5e-07
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...    58   1e-06
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]                  58   1e-06
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...    58   1e-06
ref|XP_007162982.1| hypothetical protein PHAVU_001G196700g [Phas...    56   6e-06
ref|XP_004303408.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    56   6e-06

>gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus guttatus]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
 Frame = +2

Query: 17  TSLHCASTAFDGVELDQKXXXXXXXXXXXXXXXXXXXXXXQIAD--------AGRLYVGN 172
           +S++CASTAFD VEL+Q+                      +I D        +GRLY GN
Sbjct: 64  SSVYCASTAFDSVELNQEDVDDDDDEDEEEDIDEEETLS-EIQDEGADVSQPSGRLYAGN 122

Query: 173 LPFTMTSAQLSEIFAEAGRIVSAEVV 250
           LPF+MTSAQLSEIFAEAGR+VS E+V
Sbjct: 123 LPFSMTSAQLSEIFAEAGRVVSVEIV 148


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = +2

Query: 23  LHCASTAFDGVELDQKXXXXXXXXXXXXXXXXXXXXXXQIA---DAGRLYVGNLPFTMTS 193
           LHCA  AFD +E+                         +++   +AG+LY+GNLP+ MTS
Sbjct: 69  LHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIGNLPYAMTS 128

Query: 194 AQLSEIFAEAGRIVSAEVV 250
           +QLSE+FAEAG +VS +V+
Sbjct: 129 SQLSEVFAEAGHVVSVQVI 147


>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
           arietinum]
          Length = 318

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +2

Query: 146 DAGRLYVGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           DAGRLYVGNLPF++TS+QL+EIFAEAG +VS E+V
Sbjct: 106 DAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIV 140


>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
          Length = 204

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/36 (75%), Positives = 34/36 (94%)
 Frame = +2

Query: 143 ADAGRLYVGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           ++AGRLYVGNLPF++TSAQLSEIF+EAG +VS E+V
Sbjct: 9   SEAGRLYVGNLPFSITSAQLSEIFSEAGGVVSVEIV 44


>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
           precursor - common tobacco gi|20005|emb|CAA37879.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +2

Query: 2   SSPFRTSLH---CASTAFDGVEL---DQKXXXXXXXXXXXXXXXXXXXXXXQIADAGRLY 163
           SS +R+S+    CAS + DGVE+   D +                      +  + GRLY
Sbjct: 59  SSLYRSSIFLSTCASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGRLY 117

Query: 164 VGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           VGNLPF+MTS+QLSEIFAEAG + + E+V
Sbjct: 118 VGNLPFSMTSSQLSEIFAEAGTVANVEIV 146


>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
          Length = 292

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +2

Query: 2   SSPFRTSLH---CASTAFDGVEL---DQKXXXXXXXXXXXXXXXXXXXXXXQIADAGRLY 163
           SS +R+S+    CAS + DGVE+   D +                      +  + GRLY
Sbjct: 48  SSLYRSSIFLSTCASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLY 106

Query: 164 VGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           VGNLPF+MTS+QLSEIFAEAG + + E+V
Sbjct: 107 VGNLPFSMTSSQLSEIFAEAGTVANVEIV 135


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +2

Query: 2   SSPFRTSLH---CASTAFDGVEL---DQKXXXXXXXXXXXXXXXXXXXXXXQIADAGRLY 163
           SS +R+S+    CAS + DGVE+   D +                      +  + GRLY
Sbjct: 54  SSLYRSSIFLSTCASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLY 112

Query: 164 VGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           VGNLPF+MTS+QLSEIFAEAG + + E+V
Sbjct: 113 VGNLPFSMTSSQLSEIFAEAGTVANVEIV 141


>ref|XP_007162982.1| hypothetical protein PHAVU_001G196700g [Phaseolus vulgaris]
           gi|561036446|gb|ESW34976.1| hypothetical protein
           PHAVU_001G196700g [Phaseolus vulgaris]
          Length = 317

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/35 (65%), Positives = 32/35 (91%)
 Frame = +2

Query: 146 DAGRLYVGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           DAGRLY+GNLPF++T++QL+E+FAEAG + S E+V
Sbjct: 106 DAGRLYIGNLPFSITNSQLAELFAEAGTVASVEIV 140


>ref|XP_004303408.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 365

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +2

Query: 143 ADAGRLYVGNLPFTMTSAQLSEIFAEAGRIVSAEVV 250
           +DAGRLYVGNLP++MTS QLSEIF EAG +  +E++
Sbjct: 112 SDAGRLYVGNLPYSMTSTQLSEIFGEAGTVTYSEII 147


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