BLASTX nr result

ID: Mentha27_contig00015753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00015753
         (275 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica...    69   7e-10
ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helica...    66   6e-09

>ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
           lycopersicum]
          Length = 1199

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = -2

Query: 208 PGSSRKDAGKKRQKKWIVPLEKMVVSESLRIRVAEILDKLRSSDEMVYKFEEALTNQERG 29
           P SS    GKKRQKK     E   V+ES RIRVA++L++ R S++ VY FE  L+N++R 
Sbjct: 6   PSSSSSGVGKKRQKKGQKQQEVTNVAESTRIRVAQVLEQFRVSNDEVYTFESNLSNRDRA 65

Query: 28  AVHAMCRK 5
           AVH +CRK
Sbjct: 66  AVHMLCRK 73


>ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
           tuberosum]
          Length = 1205

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -2

Query: 217 MGPPGSSRKDAGKKRQKKWIVPLEKMVVSESLRIRVAEILDKLRSSDEMVYKFEEALTNQ 38
           M    +S    GKKRQKK     E   V+ES +IRVA++L++ R+S++ VY FE  L+N+
Sbjct: 1   MASTATSSSGVGKKRQKKGQKQQEVTNVAESTQIRVAQVLEQFRASNDEVYTFESNLSNR 60

Query: 37  ERGAVHAMCRK 5
           +R AVH +CRK
Sbjct: 61  DRAAVHMLCRK 71


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