BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00015697
         (534 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus...   189   5e-46
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   164   2e-38
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   163   3e-38
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   152   4e-35
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu...   152   6e-35
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   152   6e-35
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   151   8e-35
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   151   8e-35
ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prun...   151   8e-35
ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prun...   151   8e-35
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [...   150   1e-34
ref|XP_007010069.1| Binding to TOMV RNA 1L (long form) isoform 7...   149   3e-34
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6...   149   3e-34
ref|XP_007010067.1| Binding to TOMV RNA 1L (long form) isoform 5...   149   3e-34
ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma ...   149   3e-34
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   149   3e-34
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   149   3e-34
ref|XP_002532622.1| Far upstream element-binding protein, putati...   149   5e-34
ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [...   148   7e-34

>gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus guttatus]
          Length = 314

 Score =  189 bits (479), Expect = 5e-46
 Identities = 99/150 (66%), Positives = 117/150 (78%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           MEG+K+AY+  SPE Q N             EEKTTH+RFLLSNAEAGSVIGKGG+TIND
Sbjct: 1   MEGNKSAYSAASPEEQLNHSPPPPDN-----EEKTTHLRFLLSNAEAGSVIGKGGATIND 55

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
           IQSQSGAR+QLSRN+EYFPGT+DR++MVSG +DD+LKAV+LI+ KLLDEFY ED  + DP
Sbjct: 56  IQSQSGARVQLSRNFEYFPGTSDRIIMVSGTIDDVLKAVNLILSKLLDEFYPEDGGETDP 115

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
           +SKIRLVVPNSSC          IRSL+E+
Sbjct: 116 QSKIRLVVPNSSCGGIIGKGGSIIRSLMEE 145



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/79 (41%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           +R ++ N+  G +IGKGGS I  +  +S A I++S    Y+PG +DR+V VSG + + ++
Sbjct: 119 IRLVVPNSSCGGIIGKGGSIIRSLMEESSASIKISSQDTYYPGLHDRLVTVSGSLGEQMR 178

Query: 157 AVDLIMIKLL-DEFYEDSA 104
           AV+LI++KL+ D++Y  SA
Sbjct: 179 AVELILLKLVEDQYYHQSA 197


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  164 bits (414), Expect = 2e-38
 Identities = 95/155 (61%), Positives = 107/155 (69%), Gaps = 4/155 (2%)
 Frame = -3

Query: 454 MAMEGDKAAYAEVSPEVQQNQXXXXXXXXXXXS---EEKTTHVRFLLSNAEAGSVIGKGG 284
           MAMEG   +    S E Q  Q           S   EEK T+V+FLLSNAEAGS+IGKGG
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPPPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 283 STINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDS 107
           STI + QS+SGARIQLSRNYE FPGT DR+VMVSG +DDILKAVDLI+ KL+DEFY ED 
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 106 AQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +VDP SK RLVVPNSSC          I+S IED
Sbjct: 121 GEVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIED 155



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/71 (38%), Positives = 47/71 (66%)
 Frame = -3

Query: 334 RFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKA 155
           R ++ N+  G +IGKGG+TI      S A I++S     FPG +DR+V V+G +++ ++A
Sbjct: 130 RLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVTGTLEEQMRA 189

Query: 154 VDLIMIKLLDE 122
           ++LI+ KL ++
Sbjct: 190 IELILFKLAED 200


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  163 bits (412), Expect = 3e-38
 Identities = 95/155 (61%), Positives = 106/155 (68%), Gaps = 4/155 (2%)
 Frame = -3

Query: 454 MAMEGDKAAYAEVSPEVQQNQXXXXXXXXXXXS---EEKTTHVRFLLSNAEAGSVIGKGG 284
           MAMEG   +    S E Q  Q           S   EEK T+V+FLLSNAEAGS+IGKGG
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 283 STINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDS 107
           STI + QS+SGARIQLSRNYE FPGT DR+VMVSG +DDILKAVDLI+ KL+DEFY ED 
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 106 AQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
             VDP SK RLVVPNSSC          I+S IED
Sbjct: 121 GDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIED 155



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 48/73 (65%)
 Frame = -3

Query: 334 RFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKA 155
           R ++ N+  G +IGKGG+TI      S A I++S     FPG +DR+V V+G +++ ++A
Sbjct: 130 RLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVTGTLEEQMRA 189

Query: 154 VDLIMIKLLDEFY 116
           ++LI+ KL D+ Y
Sbjct: 190 IELILFKLADDPY 202


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  152 bits (385), Expect = 4e-35
 Identities = 82/150 (54%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  ++AY   SPEV   +            E K+T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 1   MESPESAYVS-SPEVPPKRSSPPRSPTSDFME-KSTYIRFLVSNAAAGSVIGKGGSTIND 58

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT+DR++M+SG  ++I+KA++LI+ KLL E + ED  + DP
Sbjct: 59  FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADP 118

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            SK+RL+VPNSSC          I+S IED
Sbjct: 119 RSKVRLIVPNSSCGGIIGKGGSTIKSFIED 148



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/72 (37%), Positives = 45/72 (62%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           VR ++ N+  G +IGKGGSTI      S A I++S     + G  DR+V + G +++ ++
Sbjct: 122 VRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMR 181

Query: 157 AVDLIMIKLLDE 122
           A+DLI+ KL ++
Sbjct: 182 AIDLILSKLTED 193


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  152 bits (385), Expect = 4e-35
 Identities = 82/150 (54%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  ++AY   SPEV   +            E K+T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 49  MESPESAYVS-SPEVPPKRSSPPRSPTSDFME-KSTYIRFLVSNAAAGSVIGKGGSTIND 106

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT+DR++M+SG  ++I+KA++LI+ KLL E + ED  + DP
Sbjct: 107 FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADP 166

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            SK+RL+VPNSSC          I+S IED
Sbjct: 167 RSKVRLIVPNSSCGGIIGKGGSTIKSFIED 196



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/72 (37%), Positives = 45/72 (62%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           VR ++ N+  G +IGKGGSTI      S A I++S     + G  DR+V + G +++ ++
Sbjct: 170 VRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMR 229

Query: 157 AVDLIMIKLLDE 122
           A+DLI+ KL ++
Sbjct: 230 AIDLILSKLTED 241


>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|550330463|gb|ERP56589.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 313

 Score =  152 bits (383), Expect = 6e-35
 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  Q +           SEEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QSQSGARIQLSRNYE+FPGT+DR++MVSG +DD+LKAV+LI+ KLL E   ED  + +P
Sbjct: 60  FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
             ++RLVVPNS+C          I+S IE+
Sbjct: 120 RMRVRLVVPNSACGSIIGKGGSIIKSFIEE 149



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E    VR ++ N+  GS+IGKGGS I     +S A I++S     F G  DR+V V+G +
Sbjct: 118 EPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           ++ + A+DLI+ KL D+
Sbjct: 178 EEQMHAIDLILSKLTDD 194


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|222865445|gb|EEF02576.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  152 bits (383), Expect = 6e-35
 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  Q +           SEEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QSQSGARIQLSRNYE+FPGT+DR++MVSG +DD+LKAV+LI+ KLL E   ED  + +P
Sbjct: 60  FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
             ++RLVVPNS+C          I+S IE+
Sbjct: 120 RMRVRLVVPNSACGSIIGKGGSIIKSFIEE 149



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E    VR ++ N+  GS+IGKGGS I     +S A I++S     F G  DR+V V+G +
Sbjct: 118 EPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           ++ + A+DLI+ KL D+
Sbjct: 178 EEQMHAIDLILSKLTDD 194


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
           tuberosum]
          Length = 326

 Score =  151 bits (382), Expect = 8e-35
 Identities = 79/119 (66%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 176
           EE    ++FLLSNAEAGS+IGKGGSTI+D Q++SGARIQLSRN E+FPGT DR+VMVSG 
Sbjct: 38  EENKISIKFLLSNAEAGSIIGKGGSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGS 97

Query: 175 VDDILKAVDLIMIKLLDEFY-EDSAQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
           +DD+LKAVDLI+ KLLDE Y ED   V P SK+RLVVPNSSC          I+S IED
Sbjct: 98  IDDVLKAVDLILNKLLDESYVEDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIED 156



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           VR ++ N+  G +IGKGGS I      S A I++    E FPG +DR+V+V G + + ++
Sbjct: 130 VRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLGEQMR 189

Query: 157 AVDLIMIKLLDE 122
           A++LI+ KL ++
Sbjct: 190 AIELILYKLAED 201


>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
           tuberosum]
          Length = 327

 Score =  151 bits (382), Expect = 8e-35
 Identities = 79/119 (66%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 176
           EE    ++FLLSNAEAGS+IGKGGSTI+D Q++SGARIQLSRN E+FPGT DR+VMVSG 
Sbjct: 38  EENKISIKFLLSNAEAGSIIGKGGSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGS 97

Query: 175 VDDILKAVDLIMIKLLDEFY-EDSAQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
           +DD+LKAVDLI+ KLLDE Y ED   V P SK+RLVVPNSSC          I+S IED
Sbjct: 98  IDDVLKAVDLILNKLLDESYVEDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIED 156



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           VR ++ N+  G +IGKGGS I      S A I++    E FPG +DR+V+V G + + ++
Sbjct: 130 VRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLGEQMR 189

Query: 157 AVDLIMIKLLDE 122
           A++LI+ KL ++
Sbjct: 190 AIELILYKLAED 201


>ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
           gi|462415190|gb|EMJ19927.1| hypothetical protein
           PRUPE_ppa009068mg [Prunus persica]
          Length = 307

 Score =  151 bits (382), Expect = 8e-35
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T+VRFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITD 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKAVDL++ KLL E Y E++  V+P
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLVLAKLLSELYSEETDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIE 5
            +K+RLVVPNSSC          I+S IE
Sbjct: 120 RTKLRLVVPNSSCGGIIGKGGSTIKSFIE 148



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T +R ++ N+  G +IGKGGSTI      S A I++S     + G NDR+V V+G +
Sbjct: 118 EPRTKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++AVDLI+ KL ++
Sbjct: 178 DEQMRAVDLIVSKLSED 194


>ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
           gi|462415189|gb|EMJ19926.1| hypothetical protein
           PRUPE_ppa009068mg [Prunus persica]
          Length = 286

 Score =  151 bits (382), Expect = 8e-35
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T+VRFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITD 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKAVDL++ KLL E Y E++  V+P
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLVLAKLLSELYSEETDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIE 5
            +K+RLVVPNSSC          I+S IE
Sbjct: 120 RTKLRLVVPNSSCGGIIGKGGSTIKSFIE 148



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T +R ++ N+  G +IGKGGSTI      S A I++S     + G NDR+V V+G +
Sbjct: 118 EPRTKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++AVDLI+ KL ++
Sbjct: 178 DEQMRAVDLIVSKLSED 194


>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
          Length = 328

 Score =  150 bits (380), Expect = 1e-34
 Identities = 87/158 (55%), Positives = 104/158 (65%), Gaps = 7/158 (4%)
 Frame = -3

Query: 454 MAMEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTH------VRFLLSNAEAGSVIG 293
           MAMEG  AA +E +   +  Q               T H      ++FLLSNAEAGS+IG
Sbjct: 1   MAMEG--AAQSEYNSSTEGVQEHSSSPRKSQSPPPSTDHDENKISIKFLLSNAEAGSIIG 58

Query: 292 KGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY- 116
           KGGSTI+D Q++SGARIQLSRN E+FPGT DR+VMVSG +DD+LKAVDL++ KLLDE Y 
Sbjct: 59  KGGSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGPIDDVLKAVDLVLNKLLDESYV 118

Query: 115 EDSAQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
           ED   V P SK+RLVVPNSSC          I+S IED
Sbjct: 119 EDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIED 156



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = -3

Query: 337 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 158
           VR ++ N+  G +IGKGGS I      S A I++    E FPG +DR+V+V G + + ++
Sbjct: 130 VRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLGEQMR 189

Query: 157 AVDLIMIKLLDE 122
           A++LI+ KL ++
Sbjct: 190 AIELILYKLAED 201


>ref|XP_007010069.1| Binding to TOMV RNA 1L (long form) isoform 7 [Theobroma cacao]
           gi|508726982|gb|EOY18879.1| Binding to TOMV RNA 1L (long
           form) isoform 7 [Theobroma cacao]
          Length = 218

 Score =  149 bits (377), Expect = 3e-34
 Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+ KLL+E   ED+  V+P
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IED
Sbjct: 120 RTKVRLIVPNSSCGSIIGKGGATIKSFIED 149



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++A+DLI+ KL ++
Sbjct: 178 DEQMRAIDLILSKLSED 194


>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
           gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
           form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  149 bits (377), Expect = 3e-34
 Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+ KLL+E   ED+  V+P
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IED
Sbjct: 120 RTKVRLIVPNSSCGSIIGKGGATIKSFIED 149



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++A+DLI+ KL ++
Sbjct: 178 DEQMRAIDLILSKLSED 194


>ref|XP_007010067.1| Binding to TOMV RNA 1L (long form) isoform 5 [Theobroma cacao]
           gi|508726980|gb|EOY18877.1| Binding to TOMV RNA 1L (long
           form) isoform 5 [Theobroma cacao]
          Length = 285

 Score =  149 bits (377), Expect = 3e-34
 Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+ KLL+E   ED+  V+P
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IED
Sbjct: 120 RTKVRLIVPNSSCGSIIGKGGATIKSFIED 149



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++A+DLI+ KL ++
Sbjct: 178 DEQMRAIDLILSKLSED 194


>ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
           gi|508726977|gb|EOY18874.1| Binding to TOMV RNA 1L
           isoform 2 [Theobroma cacao]
          Length = 334

 Score =  149 bits (377), Expect = 3e-34
 Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+ KLL+E   ED+  V+P
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IED
Sbjct: 120 RTKVRLIVPNSSCGSIIGKGGATIKSFIED 149



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++A+DLI+ KL ++
Sbjct: 178 DEQMRAIDLILSKLSED 194


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
           gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  149 bits (377), Expect = 3e-34
 Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE  + +           + EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEF-YEDSAQVDP 92
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+ KLL+E   ED+  V+P
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IED
Sbjct: 120 RTKVRLIVPNSSCGSIIGKGGATIKSFIED 149



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 172 DDILKAVDLIMIKLLDE 122
           D+ ++A+DLI+ KL ++
Sbjct: 178 DEQMRAIDLILSKLSED 194


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
           gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
           protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  149 bits (377), Expect = 3e-34
 Identities = 78/150 (52%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y   SPE    +           + EK T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 1   MESTESSYVS-SPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTIND 59

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKA++L++ KLL E + E+   V+P
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEP 119

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VP+SSC          I+S IED
Sbjct: 120 RTKVRLIVPHSSCGAIIGKGGSTIKSFIED 149



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 48/77 (62%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T VR ++ ++  G++IGKGGSTI      S A I++S     +  + DR+V +SG +
Sbjct: 118 EPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTI 177

Query: 172 DDILKAVDLIMIKLLDE 122
           ++ ++A DLI+ KL ++
Sbjct: 178 EEQMRATDLIVSKLSED 194


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score =  149 bits (375), Expect = 5e-34
 Identities = 74/118 (62%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           EK T+VRFL+SNA AGSVIGKGG+TI D QSQSGARIQLSRNYE+FPGT+DR++++SG +
Sbjct: 33  EKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGIL 92

Query: 172 DDILKAVDLIMIKLLDEFY-EDSAQVDPESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
           DD+LK V+L++ KLL E + ED   VDP +K+RLVVPNSSC          I+S IE+
Sbjct: 93  DDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEE 150



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/74 (43%), Positives = 49/74 (66%)
 Frame = -3

Query: 343 THVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDI 164
           T VR ++ N+  GS+IGKGGS I     +S A I++S     F G NDR+V V+G +++ 
Sbjct: 122 TKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQ 181

Query: 163 LKAVDLIMIKLLDE 122
           ++A+DLI+ KL D+
Sbjct: 182 MRAIDLILSKLYDD 195



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = -3

Query: 355 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 176
           E++T  V   +++A  G V+G+GG  I +I   SGARI++S   ++  GTNDR ++++G 
Sbjct: 231 EDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGS 290

Query: 175 VDDILKAVDLIMIKL 131
              I  A  +IM K+
Sbjct: 291 QRAIRTAEGMIMQKV 305


>ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [Fragaria vesca subsp.
           vesca]
          Length = 344

 Score =  148 bits (374), Expect = 7e-34
 Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXSEEKTTHVRFLLSNAEAGSVIGKGGSTIND 269
           ME  +++Y       ++             + EK T+VRFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVSSPEAPRRRSSPPPPKSPASDTTEKPTYVRFLVSNAAAGSVIGKGGATITD 60

Query: 268 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIMIKLLDEFY-EDSAQVDP 92
            QSQSGARIQLSRN+E+FPGT DR++M+SG +++ILKAV+L++ KLL+E Y E+S  V+P
Sbjct: 61  FQSQSGARIQLSRNHEFFPGTTDRIIMISGTINEILKAVELVLAKLLNELYSEESEDVEP 120

Query: 91  ESKIRLVVPNSSCXXXXXXXXXXIRSLIED 2
            +K+RL+VPNSSC          I+S IE+
Sbjct: 121 RTKLRLIVPNSSCGGIIGKQGSTIKSFIEE 150



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/89 (34%), Positives = 52/89 (58%)
 Frame = -3

Query: 352 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 173
           E  T +R ++ N+  G +IGK GSTI     +S A I++S     + G NDR+V ++G +
Sbjct: 119 EPRTKLRLIVPNSSCGGIIGKQGSTIKSFIEESQAGIKISPQDNNYFGVNDRLVTLTGTL 178

Query: 172 DDILKAVDLIMIKLLDEFYEDSAQVDPES 86
           D+ ++A DLI+ KL ++ +   +   P S
Sbjct: 179 DEQMRAADLILSKLSEDSHYTQSMNAPFS 207