BLASTX nr result
ID: Mentha27_contig00015648
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00015648
(702 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 92 1e-16
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 91 4e-16
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 88 2e-15
ref|XP_007029946.1| Cyclin/Brf1-like TBP-binding protein, putati... 88 3e-15
ref|XP_002525676.1| transcription initiation factor brf1, putati... 86 2e-14
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 85 3e-14
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 84 5e-14
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 83 1e-13
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 83 1e-13
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 83 1e-13
ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Caps... 82 1e-13
ref|XP_002882615.1| RNA polymerase II transcription factor [Arab... 82 2e-13
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 80 9e-13
ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidops... 80 9e-13
gb|AAF14044.1|AC011436_28 putative transcription factor [Arabido... 80 9e-13
ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Popu... 78 3e-12
ref|XP_006604271.1| PREDICTED: transcription factor IIIB 90 kDa ... 76 9e-12
ref|XP_006604270.1| PREDICTED: transcription factor IIIB 90 kDa ... 76 9e-12
ref|XP_006604269.1| PREDICTED: transcription factor IIIB 90 kDa ... 76 9e-12
ref|XP_006598955.1| PREDICTED: transcription factor IIIB 90 kDa ... 75 3e-11
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 92.4 bits (228), Expect = 1e-16
Identities = 61/199 (30%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
++SE SDIDD EVD Y++ EEEK K +WEE+NR NF
Sbjct: 459 DDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANF 518
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRLSS 394
NCS D+++ N P T A A +QML KKRLSS
Sbjct: 519 QNCSEDLKAAKDLAEAAAAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSS 578
Query: 395 RIRYEVLHELID---------------QDEQSPKRNRKKAEVETEADDNYEEDPEVDGTE 529
+I Y+VL +L D Q E++ K E ET + + D DGT
Sbjct: 579 KINYDVLDKLFDESAGMEPSAKKKCEEQAEETEKTRNTTKEFETTEEQEEDYDDGYDGTY 638
Query: 530 DA---YANYKDEFIYSEDY 577
+ Y N ++ + + +DY
Sbjct: 639 GSGLYYENMEETYNHEQDY 657
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 90.9 bits (224), Expect = 4e-16
Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
++SE SDIDD EVD Y++ EEEK K +WEE+NR NF
Sbjct: 459 DDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANF 518
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRLSS 394
NCS D+++ N P T A A +QML KKRLSS
Sbjct: 519 QNCSEDLKAAKDLAEAAAAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSS 578
Query: 395 RIRYEVLHELIDQDE-QSPKRNRKKAEVETEADDNYEEDPEVDGTEDAYANYKDEF 559
+I Y+VL +L D+ P +K E E + E + TE+ +Y D +
Sbjct: 579 KINYDVLDKLFDESAGMEPSAKKKCEEQAEETEKTRNTTKEFETTEEQEEDYDDGY 634
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 88.2 bits (217), Expect = 2e-15
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Frame = +2
Query: 14 DASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXX 193
D S ES+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 295 DMSSKDFYESDGFSDIDDAEVDSYLHNEEEKRYKKIIWEEMNREYLQEQEAKEAATATHK 354
Query: 194 XXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQML 373
NF NC D+++ N P + A AV +ML
Sbjct: 355 EAWEENFKNCPEDLQAARKLDAAVKADLAKSKKEMQQKRAAEARNSVPAKSAAEAVHRML 414
Query: 374 EKKRLSSRIRYEVLHELIDQDE-QSPKRNRKKAE-------VETEADDNYEED------- 508
KKR+SS+I Y+VL +L ++ E + KR R ++ + T+ D+ ED
Sbjct: 415 TKKRISSKINYDVLEKLFEEPEAKDAKRPRTESHPDPVEKVLHTDGKDHKLEDTNENDGL 474
Query: 509 -PEVDGTEDAYANYKDEFIYSEDYNDMD 589
P + +DA D+F+Y E+ +D D
Sbjct: 475 GPLDENVDDAVGEAYDDFLYDENGSDDD 502
>ref|XP_007029946.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao] gi|508718551|gb|EOY10448.1| Cyclin/Brf1-like
TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 87.8 bits (216), Expect = 3e-15
Identities = 55/196 (28%), Positives = 90/196 (45%)
Frame = +2
Query: 2 NDSMDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXX 181
ND + D + +ES+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 390 NDKLPGVDGSGDESDNFSDIDDLEVDGYLHNEEEKRFKKIIWEEMNREYLEEQAAKEAAA 449
Query: 182 XXXXXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAV 361
N+ C D+++ N PP T A A
Sbjct: 450 AAAKEANMANYDKCPEDLQAAQELAAAAAAVVAKSRKERQQKRAAEAKNSGPPQTAAEAT 509
Query: 362 KQMLEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNYEEDPEVDGTEDAYA 541
++ML +KRLSS+I Y+ L +L D+ S ++ KK + E+ +D+ ++ ++
Sbjct: 510 RRMLARKRLSSKINYDALEKLFDEPVASSEK-PKKQKNESHSDEKEDKVSKIG------- 561
Query: 542 NYKDEFIYSEDYNDMD 589
K+E +++YND++
Sbjct: 562 --KEEGDLADEYNDVE 575
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 85.5 bits (210), Expect = 2e-14
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Frame = +2
Query: 2 NDSMDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXX 181
+D D S L+ES+ SDIDD EVD Y++ EEE K +WEE+NR
Sbjct: 404 HDDDDMSSKALDESDNFSDIDDAEVDGYLHNEEEAQFKKIIWEEMNREYLEEQAAKEAVA 463
Query: 182 XXXXXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAV 361
F +C ++++ N P + + A
Sbjct: 464 AAAKEAWEAKFKDCPEEMQAARELEAAVAAALAKSKKEKQQKRAAEAKNSVPAQSASEAA 523
Query: 362 KQMLEKKRLSSRIRYEVLHELIDQ-DEQSPKRNRKKAEVETEADDNYEEDPEVDGTED-- 532
+QML KKRLSS+I Y+VL +L D+ + PK+ R ++E +T+ E+ P+ D D
Sbjct: 524 RQMLTKKRLSSKINYDVLEKLFDEPGSKDPKKLRTESESDTD-----EKFPQTDDRNDDL 578
Query: 533 --AYANYKDEFIYSEDYND 583
N K+E + YN+
Sbjct: 579 GPGNKNEKEEDAEAYKYNN 597
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 84.7 bits (208), Expect = 3e-14
Identities = 67/208 (32%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Frame = +2
Query: 8 SMDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXX 187
+MD D +ES SDIDD EVD Y++ E+EK K +WE +NR
Sbjct: 417 AMDGIDH--DESGNFSDIDDVEVDSYLHNEQEKKYKKIIWETMNREYLEEQAAKEAAVLE 474
Query: 188 XXXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQ 367
ANC DV+ N P T A A KQ
Sbjct: 475 AKKQHEFILANCPEDVQKFAAAAAASVAKSKKEKQQKRAAELK---NTGPAQTAAEATKQ 531
Query: 368 MLEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNY-----EEDPEVD---- 520
ML KKRLS++I Y+VL +L D S N KKA ++ D+Y + DPEVD
Sbjct: 532 MLAKKRLSNKINYDVLEKLFD---DSLPENPKKARTAYDSTDDYGVKSDKIDPEVDENYE 588
Query: 521 ---GTEDAYANYKDEFIYSEDYNDMDDF 595
G + Y + Y +DY D+DD+
Sbjct: 589 HTFGEDVHYGEDVGGYGYDQDY-DLDDY 615
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 84.0 bits (206), Expect = 5e-14
Identities = 66/199 (33%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Frame = +2
Query: 11 MDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXX 190
MD D +ES SDIDD EVD Y++ E+EK K +WE +NR
Sbjct: 418 MDGIDH--DESGNFSDIDDVEVDSYLHNEQEKKYKKIIWETMNREYLEEQAAKEAAVLEA 475
Query: 191 XXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQM 370
ANC DV+ N P T A A KQM
Sbjct: 476 KKQHEFILANCPEDVQKFAAATAASVAKSKKEKQQKRAAELK---NTGPAQTAAEATKQM 532
Query: 371 LEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNY-----EEDPEVDGTEDA 535
L KKRLS++I Y+VL +L D S N KKA ++ D+Y + DPEVD
Sbjct: 533 LAKKRLSNKINYDVLEKLFD---DSAPENPKKARTAYDSTDDYGVKSDKIDPEVD----- 584
Query: 536 YANYKDEFIYSEDYNDMDD 592
NY D F ED++ +D
Sbjct: 585 -ENYDDTF--GEDFHSGED 600
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 82.8 bits (203), Expect = 1e-13
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Frame = +2
Query: 11 MDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXX 190
+DA+ + S+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 403 VDATTEASDGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKEAAAAAA 462
Query: 191 XXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQM 370
++ NC +++ N P T A ++M
Sbjct: 463 KAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRM 522
Query: 371 LEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNY---------EEDPEVDG 523
L KKRLSS+I Y+VL +L D S +K+ + ++ DD + ED +G
Sbjct: 523 LTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEG 582
Query: 524 TEDAYANYKDEFIYSEDYNDMDD 592
DA + + + DY ++D+
Sbjct: 583 DFDANGDVGEAYENELDYGNVDE 605
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED: transcription
factor IIIB 90 kDa subunit-like isoform X1 [Citrus
sinensis] gi|557545784|gb|ESR56762.1| hypothetical
protein CICLE_v10019321mg [Citrus clementina]
Length = 620
Score = 82.8 bits (203), Expect = 1e-13
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Frame = +2
Query: 11 MDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXX 190
+DA+ + S+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 405 VDATTEASDGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKEAAAAAA 464
Query: 191 XXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQM 370
++ NC +++ N P T A ++M
Sbjct: 465 KAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRM 524
Query: 371 LEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNY---------EEDPEVDG 523
L KKRLSS+I Y+VL +L D S +K+ + ++ DD + ED +G
Sbjct: 525 LTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEG 584
Query: 524 TEDAYANYKDEFIYSEDYNDMDD 592
DA + + + DY ++D+
Sbjct: 585 DFDANGDVGEAYENELDYGNVDE 607
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 82.8 bits (203), Expect = 1e-13
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Frame = +2
Query: 11 MDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXX 190
+DA+ + S+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 328 VDATTEASDGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKEAAAAAA 387
Query: 191 XXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQM 370
++ NC +++ N P T A ++M
Sbjct: 388 KAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKRAAEAKNSGPAQTALEATRRM 447
Query: 371 LEKKRLSSRIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNY---------EEDPEVDG 523
L KKRLSS+I Y+VL +L D S +K+ + ++ DD + ED +G
Sbjct: 448 LTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEG 507
Query: 524 TEDAYANYKDEFIYSEDYNDMDD 592
DA + + + DY ++D+
Sbjct: 508 DFDANGDVGEAYENELDYGNVDE 530
>ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Capsella rubella]
gi|482565968|gb|EOA30157.1| hypothetical protein
CARUB_v10013272mg [Capsella rubella]
Length = 600
Score = 82.4 bits (202), Expect = 1e-13
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Frame = +2
Query: 5 DSMDASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXX 184
D + + T +ES SDIDD EV+ YIN E+EK K VWEE+N+
Sbjct: 384 DGAEENADTSDESGNFSDIDDEEVNGYINNEDEKHYKKIVWEEMNKVYIEEQAAKEAALK 443
Query: 185 XXXXXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVK 364
+ +NC E N PP T AV+
Sbjct: 444 AASEALKASNSNCP---EHARKLYEATIASKKQSRKEKQQKKAEEEKNAAPPATAMEAVR 500
Query: 365 QMLEKKRLSSRIRYEVLHELIDQD--EQSPKRNRKKAEVETEADDNYEEDPEVDGTEDAY 538
+ L KKRL++ I Y+VL EL D E PK+++ +A +E E + +PE+ ED
Sbjct: 501 RTLVKKRLTTVINYDVLEELFDTSAGENLPKKSKTEAGMEKEKKEEKSNEPEIGENEDEA 560
Query: 539 ANYKDEFIYSEDYN 580
++ ++ S D N
Sbjct: 561 EEGEEGYVESYDMN 574
>ref|XP_002882615.1| RNA polymerase II transcription factor [Arabidopsis lyrata subsp.
lyrata] gi|297328455|gb|EFH58874.1| RNA polymerase II
transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 81.6 bits (200), Expect = 2e-13
Identities = 64/206 (31%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Frame = +2
Query: 29 TLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXX 208
T +ES+ SDI D EVD YIN EEE KT W E+N+
Sbjct: 392 TSDESDNFSDISDDEVDGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAASEALKA 451
Query: 209 NFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRL 388
+ +NC D N PP T AV++ LEKKRL
Sbjct: 452 SNSNCPEDARKAFEAAKADAAKSRKEKQQKKAEEAK---NAAPPATAMEAVRRTLEKKRL 508
Query: 389 SSRIRYEVLHELIDQD--EQSPKRNRKKAEVET------------EADDNYEEDPEVDGT 526
S I Y+VL EL D E+SPKR++ + ++E E +D EED E +G+
Sbjct: 509 SLVINYDVLEELFDTSTAEKSPKRSKTETDIEKKKEVKSNEHEKGENEDEAEEDEE-EGS 567
Query: 527 EDAYANYKD----EFIYSEDYNDMDD 592
++Y D E Y ED + +D
Sbjct: 568 VESYDMNTDFQNGEKFYEEDEGEEED 593
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 79.7 bits (195), Expect = 9e-13
Identities = 54/159 (33%), Positives = 73/159 (45%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
+ESETLSDIDD EV+ YI+ EEE LKT +W E+N+ +
Sbjct: 480 DESETLSDIDDLEVNGYIHNEEETRLKTIIWTEMNKEYLEEQAAKEAAAAAARAAYEADI 539
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRLSS 394
ANC GD N P T A A +QML KK++SS
Sbjct: 540 ANCHGDA---LELAKATAAAIAKMKKDKQQKRAEEARNATPAQTAAEATRQMLTKKKISS 596
Query: 395 RIRYEVLHELIDQDEQSPKRNRKKAEVETEADDNYEEDP 511
+I YEVL++L DE++P ++ K + D + EE P
Sbjct: 597 KINYEVLNKLF--DEETPAKDEGKTQ-----DGDAEEVP 628
>ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
gi|110741698|dbj|BAE98795.1| putative transcription
factor [Arabidopsis thaliana] gi|332641235|gb|AEE74756.1|
Cyclin/Brf1-like TBP-binding protein [Arabidopsis
thaliana]
Length = 604
Score = 79.7 bits (195), Expect = 9e-13
Identities = 60/209 (28%), Positives = 86/209 (41%), Gaps = 21/209 (10%)
Frame = +2
Query: 29 TLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXX 208
T +ES+ SDI D EV+ YIN EEE KT W E+N+
Sbjct: 392 TSDESDNFSDISDDEVNGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAASEALKA 451
Query: 209 NFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRL 388
+ +NC D N PP T AV++ L+KKRL
Sbjct: 452 SNSNCPEDARKAFEAAKADAAKSRKEKQQKKAEEAK---NAAPPATAVEAVRRTLDKKRL 508
Query: 389 SSRIRYEVLHELIDQD--EQSPKRNRKKAEVETEADDNYE---------------EDPEV 517
SS I Y+VL L D E+SPKR++ + ++E + ++N E E+ E
Sbjct: 509 SSVINYDVLESLFDTSAPEKSPKRSKTETDIEKKKEENKEMKSNEHENGENEDEDEEDEE 568
Query: 518 DGTEDAYANYKD----EFIYSEDYNDMDD 592
+G ++Y D E Y ED + +D
Sbjct: 569 EGNVESYDMKTDFQNGEKFYEEDEEEEED 597
>gb|AAF14044.1|AC011436_28 putative transcription factor [Arabidopsis thaliana]
Length = 600
Score = 79.7 bits (195), Expect = 9e-13
Identities = 60/209 (28%), Positives = 86/209 (41%), Gaps = 21/209 (10%)
Frame = +2
Query: 29 TLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXX 208
T +ES+ SDI D EV+ YIN EEE KT W E+N+
Sbjct: 388 TSDESDNFSDISDDEVNGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAASEALKA 447
Query: 209 NFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKRL 388
+ +NC D N PP T AV++ L+KKRL
Sbjct: 448 SNSNCPEDARKAFEAAKADAAKSRKEKQQKKAEEAK---NAAPPATAVEAVRRTLDKKRL 504
Query: 389 SSRIRYEVLHELIDQD--EQSPKRNRKKAEVETEADDNYE---------------EDPEV 517
SS I Y+VL L D E+SPKR++ + ++E + ++N E E+ E
Sbjct: 505 SSVINYDVLESLFDTSAPEKSPKRSKTETDIEKKKEENKEMKSNEHENGENEDEDEEDEE 564
Query: 518 DGTEDAYANYKD----EFIYSEDYNDMDD 592
+G ++Y D E Y ED + +D
Sbjct: 565 EGNVESYDMKTDFQNGEKFYEEDEEEEED 593
>ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Populus trichocarpa]
gi|550331015|gb|EEE88095.2| hypothetical protein
POPTR_0009s04400g [Populus trichocarpa]
Length = 562
Score = 77.8 bits (190), Expect = 3e-12
Identities = 46/139 (33%), Positives = 61/139 (43%)
Frame = +2
Query: 14 DASDFTLEESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXX 193
D S +ES+ SDIDD EVD Y++ EEEK K +WEE+NR
Sbjct: 366 DMSSKAFDESDGFSDIDDAEVDSYLHNEEEKRYKKIIWEEMNREYLQEQAAKEAAAATLK 425
Query: 194 XXXXXNFANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQML 373
NF NC D+++ NL P + A AV +ML
Sbjct: 426 KAWEENFKNCPEDLQAAKKLDAAVKADLAKSKKETQQKRASEARNLAPAKSAAEAVHRML 485
Query: 374 EKKRLSSRIRYEVLHELID 430
KKRL S+I Y+VL +L +
Sbjct: 486 TKKRLGSKINYDVLEKLFE 504
>ref|XP_006604271.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X3
[Glycine max]
Length = 529
Score = 76.3 bits (186), Expect = 9e-12
Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
+ESETLSDIDD EVD+YI+ EE K +K +WE NR NF
Sbjct: 314 DESETLSDIDDEEVDLYIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANF 373
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKR--- 385
NCS D+ + N P + A A QM KKR
Sbjct: 374 ENCSEDLLAARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQ 433
Query: 386 -LSSRIRYEVLHELIDQDEQSPK-RNRKKAEVETEADDNYEEDPEVDGTEDAYANYKDEF 559
L S++ +E+L+EL D+ E + + KK + D++ +V+ + DEF
Sbjct: 434 GLKSKVNFELLNELFDEMENTDDLKKPKKVRFDLPLDNDDNIPSKVEDKNEDEMGLADEF 493
Query: 560 IYSEDYNDM 586
D +M
Sbjct: 494 DDEGDMGEM 502
>ref|XP_006604270.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Glycine max]
Length = 618
Score = 76.3 bits (186), Expect = 9e-12
Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
+ESETLSDIDD EVD+YI+ EE K +K +WE NR NF
Sbjct: 403 DESETLSDIDDEEVDLYIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANF 462
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKR--- 385
NCS D+ + N P + A A QM KKR
Sbjct: 463 ENCSEDLLAARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQ 522
Query: 386 -LSSRIRYEVLHELIDQDEQSPK-RNRKKAEVETEADDNYEEDPEVDGTEDAYANYKDEF 559
L S++ +E+L+EL D+ E + + KK + D++ +V+ + DEF
Sbjct: 523 GLKSKVNFELLNELFDEMENTDDLKKPKKVRFDLPLDNDDNIPSKVEDKNEDEMGLADEF 582
Query: 560 IYSEDYNDM 586
D +M
Sbjct: 583 DDEGDMGEM 591
>ref|XP_006604269.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Glycine max]
Length = 620
Score = 76.3 bits (186), Expect = 9e-12
Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
+ESETLSDIDD EVD+YI+ EE K +K +WE NR NF
Sbjct: 405 DESETLSDIDDEEVDLYIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANF 464
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKR--- 385
NCS D+ + N P + A A QM KKR
Sbjct: 465 ENCSEDLLAARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQ 524
Query: 386 -LSSRIRYEVLHELIDQDEQSPK-RNRKKAEVETEADDNYEEDPEVDGTEDAYANYKDEF 559
L S++ +E+L+EL D+ E + + KK + D++ +V+ + DEF
Sbjct: 525 GLKSKVNFELLNELFDEMENTDDLKKPKKVRFDLPLDNDDNIPSKVEDKNEDEMGLADEF 584
Query: 560 IYSEDYNDM 586
D +M
Sbjct: 585 DDEGDMGEM 593
>ref|XP_006598955.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Glycine max] gi|571525383|ref|XP_006598956.1|
PREDICTED: transcription factor IIIB 90 kDa subunit-like
isoform X2 [Glycine max]
Length = 623
Score = 74.7 bits (182), Expect = 3e-11
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 8/194 (4%)
Frame = +2
Query: 35 EESETLSDIDDTEVDVYINTEEEKILKTTVWEEINRXXXXXXXXXXXXXXXXXXXXXXNF 214
+ESETLSDIDD EVD+YI+ EE K +K +WE NR F
Sbjct: 405 DESETLSDIDDEEVDLYIHDEEGKHIKKILWETANREYLEEQAAKEAAAAANKKAFEAKF 464
Query: 215 ANCSGDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEPPDTTAGAVKQMLEKKR--- 385
NCS D+ + N P + A A QM KKR
Sbjct: 465 ENCSEDILAARELAASSIEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQ 524
Query: 386 -LSSRIRYEVLHELID----QDEQSPKRNRKKAEVETEADDNYEEDPEVDGTEDAYANYK 550
L S++ +E+L+EL D Q+ + +KK ++ D + +++ +
Sbjct: 525 GLKSKVNFELLNELFDEMDTQENTDGLKKQKKVRFDSPLDKHDNLPSKIENKNEDEMGSV 584
Query: 551 DEFIYSEDYNDMDD 592
DEF ED DM +
Sbjct: 585 DEF---EDEGDMGE 595