BLASTX nr result
ID: Mentha27_contig00015186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00015186
(515 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003593528.1| Splicing factor U2af large subunit B [Medica... 65 1e-08
gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) ... 65 1e-08
ref|XP_003578657.1| PREDICTED: splicing factor U2af large subuni... 64 2e-08
ref|XP_004293510.1| PREDICTED: splicing factor U2af large subuni... 61 1e-07
gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indi... 60 2e-07
sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large... 60 2e-07
ref|XP_004485755.1| PREDICTED: splicing factor U2af large subuni... 60 3e-07
ref|XP_004485754.1| PREDICTED: splicing factor U2af large subuni... 60 3e-07
ref|XP_006347063.1| PREDICTED: splicing factor U2af large subuni... 59 5e-07
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni... 59 9e-07
gb|EYU19494.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus... 57 2e-06
ref|XP_006663107.1| PREDICTED: splicing factor U2af large subuni... 57 2e-06
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni... 57 3e-06
gb|EYU19496.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus... 57 3e-06
gb|EYU19495.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus... 57 3e-06
gb|AFK48456.1| unknown [Lotus japonicus] 56 4e-06
ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [S... 56 4e-06
ref|XP_006346939.1| PREDICTED: splicing factor U2af large subuni... 56 6e-06
ref|XP_006346938.1| PREDICTED: splicing factor U2af large subuni... 56 6e-06
ref|XP_004233511.1| PREDICTED: splicing factor U2af large subuni... 56 6e-06
>ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 593
Score = 65.1 bits (157), Expect = 1e-08
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 17/108 (15%)
Frame = -2
Query: 274 RDGERDRYHK-QDGQRTARYHG--GRSKNEDYGDRRNQESSRYYKHGGDGE--------- 131
RDG+R +H +D R +Y G GR K + Y +R ++ R+ + D +
Sbjct: 33 RDGDRKSFHDHRDRHRDDKYEGFKGRGKYDSYNRQRGRDYDRHNDYDRDRDTRNRYGAHS 92
Query: 130 -----KHRQRSPSQSDDKSYSKRTSGFDVAPPATGALPSPSEQVAGVS 2
+ R RS S+S +S KRTSGFD+APPATG P+ S Q+ G++
Sbjct: 93 KRSRRESRSRSRSRSPSQSEGKRTSGFDMAPPATGVTPTVSGQMPGIA 140
>gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 257
Score = 65.1 bits (157), Expect = 1e-08
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 17/108 (15%)
Frame = -2
Query: 274 RDGERDRYHK-QDGQRTARYHG--GRSKNEDYGDRRNQESSRYYKHGGDGE--------- 131
RDG+R +H +D R +Y G GR K + Y +R ++ R+ + D +
Sbjct: 33 RDGDRKSFHDHRDRHRDDKYEGFKGRGKYDSYNRQRGRDYDRHNDYDRDRDTRNRYGAHS 92
Query: 130 -----KHRQRSPSQSDDKSYSKRTSGFDVAPPATGALPSPSEQVAGVS 2
+ R RS S+S +S KRTSGFD+APPATG P+ S Q+ G++
Sbjct: 93 KRSRRESRSRSRSRSPSQSEGKRTSGFDMAPPATGVTPTVSGQMPGIA 140
>ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = -2
Query: 295 FKRSDWNRDGERDRYHKQDGQRTARY-HGGRSKNEDYGDRRNQESSRYYKHGGDGEKHRQ 119
++ D NRD RDR+H++ +R+ R H GRS + DY RN ES R + DG + RQ
Sbjct: 71 YEHGDRNRD--RDRHHQEHRERSERREHRGRSDDHDYRRSRNHESERR-ERDRDGHR-RQ 126
Query: 118 RSPSQSDDKSYSKRTSGFDVAPPATGALPSPS 23
RS S+S ++ SKR SGFD P T ++ +PS
Sbjct: 127 RSRSRSRSRAQSKRVSGFDQGPSQTISIAAPS 158
>ref|XP_004293510.1| PREDICTED: splicing factor U2af large subunit B-like [Fragaria
vesca subsp. vesca]
Length = 523
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 21/104 (20%)
Frame = -2
Query: 277 NRDGERDRYHKQDGQ---RTARYHGGRSKNEDYGDRRNQ--------ESSRYYKHGGDGE 131
+R+ + DRY + R+ R+ GR+K Y RRNQ E R++ H D +
Sbjct: 28 DRERDDDRYSRDTRDYKDRSGRFDRGRNKYSGYSGRRNQDYDRSRDYEQDRHHDHDQDRD 87
Query: 130 K-HRQRSPSQSDD---------KSYSKRTSGFDVAPPATGALPS 29
+ HR RSPS S + +S SKR SGFD+APPA LPS
Sbjct: 88 RRHRHRSPSPSREEDRDRSTRSRSKSKRASGFDMAPPAGAVLPS 131
>gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Frame = -2
Query: 283 DWNRDGERDRYHKQDGQRTARYHGGRSKNEDYGDRRNQESSRYYKHGGDGEK-HRQRSPS 107
D +RD +RDR+H+ +R R H R +++D+ R+++S R H DG + HR RS S
Sbjct: 75 DRDRDKDRDRHHRHHRER--REH--RDRSDDHDRHRSRDSERRRDHERDGRRRHRSRSRS 130
Query: 106 QSD---------DKSYSKRTSGFDVAPPATG------ALPSPSE 20
+S +S SKR SGFD+APPA A+P+PS+
Sbjct: 131 RSRGRDRRSRSRSRSKSKRVSGFDMAPPAQAVVPQFPAIPTPSQ 174
>sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B gi|108864649|gb|ABA95281.2| transposon
protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein
OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Frame = -2
Query: 283 DWNRDGERDRYHKQDGQRTARYHGGRSKNEDYGDRRNQESSRYYKHGGDGEK-HRQRSPS 107
D +RD +RDR+H+ +R R H R +++D+ R+++S R H DG + HR RS S
Sbjct: 75 DRDRDKDRDRHHRHHRER--REH--RDRSDDHDRHRSRDSERRRDHERDGRRRHRSRSRS 130
Query: 106 QSD---------DKSYSKRTSGFDVAPPATG------ALPSPSE 20
+S +S SKR SGFD+APPA A+P+PS+
Sbjct: 131 RSRGRDRRSRSRSRSKSKRVSGFDMAPPAQAVVPQFPAIPTPSQ 174
>ref|XP_004485755.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Cicer arietinum]
Length = 507
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 18/109 (16%)
Frame = -2
Query: 274 RDGERDRYHKQDGQRTARYHG--GRSKNEDYGDRRNQESSRY----------YKHGGDGE 131
RDGER +H + R +Y G GR + + Y R ++ R+ ++G +
Sbjct: 30 RDGERKTFHDRR-HRDDKYEGFKGRGRYDSYNRHRGRDYDRHNDYVRDEDTRQRYGARSK 88
Query: 130 KHRQRSPSQSDDKSYS------KRTSGFDVAPPATGALPSPSEQVAGVS 2
+ R+ S S+S +S S KRTSGFD+APPATG P+ S Q+ G++
Sbjct: 89 RSRRESRSRSRSRSKSPPQPEGKRTSGFDMAPPATGVTPAVSGQMPGIA 137
>ref|XP_004485754.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Cicer arietinum]
Length = 522
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 18/109 (16%)
Frame = -2
Query: 274 RDGERDRYHKQDGQRTARYHG--GRSKNEDYGDRRNQESSRY----------YKHGGDGE 131
RDGER +H + R +Y G GR + + Y R ++ R+ ++G +
Sbjct: 30 RDGERKTFHDRR-HRDDKYEGFKGRGRYDSYNRHRGRDYDRHNDYVRDEDTRQRYGARSK 88
Query: 130 KHRQRSPSQSDDKSYS------KRTSGFDVAPPATGALPSPSEQVAGVS 2
+ R+ S S+S +S S KRTSGFD+APPATG P+ S Q+ G++
Sbjct: 89 RSRRESRSRSRSRSKSPPQPEGKRTSGFDMAPPATGVTPAVSGQMPGIA 137
>ref|XP_006347063.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
tuberosum]
Length = 541
Score = 59.3 bits (142), Expect = 5e-07
Identities = 41/98 (41%), Positives = 53/98 (54%)
Frame = -2
Query: 295 FKRSDWNRDGERDRYHKQDGQRTARYHGGRSKNEDYGDRRNQESSRYYKHGGDGEKHRQR 116
++R+D N D R R HK D ++ HGGR K E RR++ S+ H +K R R
Sbjct: 64 YRRNDDNEDYSRSRNHKFDRRQD---HGGREKGE---TRRSRSRSKDSSH----DKARSR 113
Query: 115 SPSQSDDKSYSKRTSGFDVAPPATGALPSPSEQVAGVS 2
S S K SKRTSGFD+APP + S +EQ G S
Sbjct: 114 SSSPLPPK--SKRTSGFDMAPPVAASFYSGAEQFLGSS 149
>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 58.5 bits (140), Expect = 9e-07
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Frame = -2
Query: 283 DWNRDGERDRYHK-QDGQRTARYHGGRSKNED-------YGDRRNQESSRYYKHGGDGE- 131
D +RD +RDR+H+ + R R GGRS+++D Y RR+ + R +H
Sbjct: 102 DKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRS 161
Query: 130 ------KHRQRSPS--QSDDKSYSKRTSGFDVAPPATGAL 35
+HR RSPS +S +S SKR SGFD+APP T L
Sbjct: 162 RSKGIHEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAIL 201
>gb|EYU19494.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus guttatus]
Length = 570
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Frame = -2
Query: 274 RDGERDRYHKQDGQRTARYHGGRSKNEDYGDR--RNQESSRYYKHGGDGE---KHRQRSP 110
RD ++DR ++ R+ R R+++ D GD R+++ R H D E +HR RSP
Sbjct: 92 RDPDKDRDRERHRYRSERRERERTRDPDDGDDYYRSRDHDRRRDHDKDREDRHRHRPRSP 151
Query: 109 SQSDD--------KSYSKRTSGFDVAPPATGALPS 29
S+S +S SKRTSGFD+APPA LP+
Sbjct: 152 SRSKSEHRSRSRSRSRSKRTSGFDMAPPAASLLPN 186
>ref|XP_006663107.1| PREDICTED: splicing factor U2af large subunit B-like [Oryza
brachyantha]
Length = 567
Score = 57.4 bits (137), Expect = 2e-06
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Frame = -2
Query: 283 DWNRDGERDRYHKQDGQRTARYHGGRSKNEDYGDRRNQESSRYYKHGGDGEK-HRQRSPS 107
D ++D +RDR+H+ +R R H R +++D+ R+++S R H DG + HR RS S
Sbjct: 93 DRDKDKDRDRHHRHHRER--REH--RDRSDDHDRHRSRDSERRRDHERDGRRRHRSRSRS 148
Query: 106 QSD---------DKSYSKRTSGFDVAPPATG------ALPSPSE 20
+S +S SKR SGFD+APP A+P+PS+
Sbjct: 149 RSRGRDRRSRSRSRSKSKRVSGFDMAPPPQAVVPQFPAIPTPSQ 192
>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Frame = -2
Query: 283 DWNRDGERDRYHK-QDGQRTARYHGGRSKNED-------YGDRRNQESSRYYKHGGDGE- 131
D +RD +RDR+H+ + R R GGR +++D Y RR+ + R +H
Sbjct: 102 DKDRDRDRDRHHRDRHRDRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRS 161
Query: 130 ------KHRQRSPS--QSDDKSYSKRTSGFDVAPPATGAL 35
+HR RSPS +S +S SKR SGFD+APP T L
Sbjct: 162 RSKGIHEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAIL 201
>gb|EYU19496.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus guttatus]
Length = 572
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 15/97 (15%)
Frame = -2
Query: 274 RDGERDRYHKQDGQRTARYHGGRSKNEDYGDR--RNQESSRYYKHGGDGE---KHRQRSP 110
RD ++DR ++ R+ R R+++ D GD R+++ R H D E +HR RSP
Sbjct: 92 RDPDKDRDRERHRYRSERRERERTRDPDDGDDYYRSRDHDRRRDHDKDREDRHRHRPRSP 151
Query: 109 SQSDD----------KSYSKRTSGFDVAPPATGALPS 29
S+S +S SKRTSGFD+APPA LP+
Sbjct: 152 SRSKSEHRSRSRSRSRSKSKRTSGFDMAPPAASLLPN 188
>gb|EYU19495.1| hypothetical protein MIMGU_mgv1a003650mg [Mimulus guttatus]
Length = 512
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 15/97 (15%)
Frame = -2
Query: 274 RDGERDRYHKQDGQRTARYHGGRSKNEDYGDR--RNQESSRYYKHGGDGE---KHRQRSP 110
RD ++DR ++ R+ R R+++ D GD R+++ R H D E +HR RSP
Sbjct: 92 RDPDKDRDRERHRYRSERRERERTRDPDDGDDYYRSRDHDRRRDHDKDREDRHRHRPRSP 151
Query: 109 SQSDD----------KSYSKRTSGFDVAPPATGALPS 29
S+S +S SKRTSGFD+APPA LP+
Sbjct: 152 SRSKSEHRSRSRSRSRSKSKRTSGFDMAPPAASLLPN 188
>gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 56.2 bits (134), Expect = 4e-06
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = -2
Query: 274 RDGER----DRYHK--QDGQRTAR-----YHGGRSKNEDYGDRRNQESSRYYKHGGDGEK 128
+DGER DR+H+ +DG R Y+ RS++ D + R ++ R +K+ ++
Sbjct: 36 QDGERRDFHDRHHRDYKDGGFNGRDRYNSYNRHRSRDYDRHNDRVKDGERRHKYEAHSKR 95
Query: 127 HR--QRSPSQSDDKSYSKRTSGFDVAPPATGALPSPSEQVAGVS 2
R RSPS+S +S SKR SGFD+APP+ + S Q G++
Sbjct: 96 SRGESRSPSRSPSRSESKRVSGFDMAPPSADGTSAVSGQTLGIN 139
>ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein
SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 56.2 bits (134), Expect = 4e-06
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Frame = -2
Query: 283 DWNRDGERDRYHKQDGQRTARYHGGRSKNEDY-GDRRNQESSRYYKHGGDG-EKHRQRSP 110
D +RD +RDR +D R +R+H R + D D R ++S R + DG +HR RS
Sbjct: 68 DRDRDRDRDRDRDRDKDRQSRHHRERREPRDRPDDHRGRDSERRRERDRDGHRRHRSRSR 127
Query: 109 SQSDD-----KSYSKRTSGFDVAPP-ATGA----LPSPSEQVAGVS 2
S+ D +S SKR SGFD PP A G+ +P+PS Q+ G S
Sbjct: 128 SRGRDRRSRSRSRSKRVSGFDAPPPQAMGSPFPVIPTPS-QLPGTS 172
>ref|XP_006346939.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Solanum tuberosum]
Length = 560
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Frame = -2
Query: 289 RSDWNRDGERDRYHKQDGQRTA-RYHGGRSKNEDYGDRRNQESSRYYKHGGDGEKHRQRS 113
R +RD RDR +++ +RT R R + DY +R+ + R +H +HR RS
Sbjct: 86 RDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDYDKQRDHDKDRESRH-----RHRSRS 140
Query: 112 PSQSDDKSYS--------KRTSGFDVAPPATGALP---SPSEQVAGVS 2
+S+ KS S KR SGFD+APP T LP + + QV G S
Sbjct: 141 RGRSEHKSRSRSRSRSKSKRISGFDMAPPTTAMLPGATAAAGQVPGTS 188
>ref|XP_006346938.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Solanum tuberosum]
Length = 561
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Frame = -2
Query: 289 RSDWNRDGERDRYHKQDGQRTA-RYHGGRSKNEDYGDRRNQESSRYYKHGGDGEKHRQRS 113
R +RD RDR +++ +RT R R + DY +R+ + R +H +HR RS
Sbjct: 86 RDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDYDKQRDHDKDRESRH-----RHRSRS 140
Query: 112 PSQSDDKSYS--------KRTSGFDVAPPATGALP---SPSEQVAGVS 2
+S+ KS S KR SGFD+APP T LP + + QV G S
Sbjct: 141 RGRSEHKSRSRSRSRSKSKRISGFDMAPPTTAMLPGATAAAGQVPGTS 188
>ref|XP_004233511.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
lycopersicum]
Length = 560
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Frame = -2
Query: 289 RSDWNRDGERDRYHKQDGQRTA-RYHGGRSKNEDYGDRRNQESSRYYKHGGDGEKHRQRS 113
R +RD RDR +++ +RT R R + DY +R+ + R +H +HR RS
Sbjct: 86 RDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDYDKQRDHDKDRESRH-----RHRSRS 140
Query: 112 PSQSDDKSYS--------KRTSGFDVAPPATGALP---SPSEQVAGVS 2
+S+ KS S KR SGFD+APP T LP + + QV G S
Sbjct: 141 RGRSEHKSRSRSRSRSKSKRISGFDMAPPTTAMLPGATAAAGQVPGTS 188