BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00012296
         (1352 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   579   e-163
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       488   e-135
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   461   e-127
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   461   e-127
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   461   e-127
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   461   e-127
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   460   e-127
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   459   e-126
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   457   e-126
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   453   e-125
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   451   e-124
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   447   e-123
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        441   e-121
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   441   e-121
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   441   e-121
ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phas...   441   e-121
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   437   e-120
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   436   e-120
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...   430   e-118

>gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 435

 Score =  579 bits (1493), Expect = e-163
 Identities = 284/434 (65%), Positives = 333/434 (76%), Gaps = 3/434 (0%)
 Frame = -1

Query: 1334 MIKQPGTAAV-LRLGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRV 1158
            MIKQP  AA  LRL NLME+ APPPP+ Y+ YQH DACSL RW A+ESY+FMY +PW +V
Sbjct: 1    MIKQPAAAAAGLRLRNLMENSAPPPPKGYIHYQHNDACSLSRWNAKESYQFMYEKPWQKV 60

Query: 1157 NDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIIDESDKPESECVPAKGRTGRWERVTFKIL 981
            NDFYLD VNGRRS+ +LF +E    +DGAE I++ DKP+   V AK R+GRW RVTFKI 
Sbjct: 61   NDFYLDVVNGRRSVSELFERETYAVHDGAETIEDCDKPDLMSVRAKDRSGRWARVTFKIR 120

Query: 980  ISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKG 801
            +SY+G+SFDGWQKQP LNTVQGL+E +LGKFVDE KAQ+LKEKKLP++ C  VAGRTDKG
Sbjct: 121  LSYHGSSFDGWQKQPGLNTVQGLIEKSLGKFVDEDKAQMLKEKKLPVDCCVTVAGRTDKG 180

Query: 800  VTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYI 621
            VTAL Q C+FYTWRKD+K +DIEDA+   APGKIR  SVSQV+RDFHPNFSAKWR Y YI
Sbjct: 181  VTALEQFCSFYTWRKDIKTVDIEDAINGVAPGKIRAISVSQVTRDFHPNFSAKWRRYLYI 240

Query: 620  FPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYVETQ-QSGTKPFTF 444
            FPF+DEN DDE S+C+K+ LD  +CHD  YGE    + C +  DDY +T+ Q+G KP +F
Sbjct: 241  FPFDDENVDDEASQCEKNVLDSDVCHDGRYGELPGVENCGNEIDDYEQTETQTGHKPLSF 300

Query: 443  EVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSK 264
            +VS VN LLH LEGKLLSFRMFARDTKASRNIGPPTECF+ H+RA+EAY+ CPK G  SK
Sbjct: 301  DVSCVNRLLHHLEGKLLSFRMFARDTKASRNIGPPTECFIFHSRASEAYIRCPKEGTRSK 360

Query: 263  VMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLV 84
            +MC+ELVANRFLRKMVRVLV              AL+KL+D            PDGLCLV
Sbjct: 361  IMCIELVANRFLRKMVRVLVATAIREAAAGADEDALLKLIDATCRRATAPPAPPDGLCLV 420

Query: 83   DVGYTEFDKKFCLI 42
            DVGY EFD+K C I
Sbjct: 421  DVGYAEFDRKNCFI 434


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  488 bits (1255), Expect = e-135
 Identities = 256/425 (60%), Positives = 302/425 (71%), Gaps = 4/425 (0%)
 Frame = -1

Query: 1304 LRLGNLMESPAPP---PPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAV 1134
            +RL NLME  A P   P +DYV YQH DA SL RWTA+ESY+FMY RPW RVN FYL+ V
Sbjct: 1    MRLRNLMEGAALPSHTPAKDYVHYQHNDAFSLCRWTAKESYQFMYSRPWQRVNCFYLELV 60

Query: 1133 NGRRSLPQLFGKEVNT-NDGAEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSF 957
            NGRR+L +LF KE +  +D    +D  + P S  +P + RTGRW R+TFKI++SY+G SF
Sbjct: 61   NGRRTLSELFPKEKHAIHDTDRTLDVYNYP-SASLPNEQRTGRWARLTFKIILSYHGYSF 119

Query: 956  DGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVC 777
            DGWQKQP LNTVQGL+E++LG F+DEKKA  LKEK LP +GCA+VAGRTDKGV+ALGQVC
Sbjct: 120  DGWQKQPGLNTVQGLIENSLGVFIDEKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVC 179

Query: 776  AFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENE 597
            +FYTWRK+V+A DI +A+  +APGK+RVTSVSQVSR+FHPNFSAKWR Y YIFP N E  
Sbjct: 180  SFYTWRKEVEAEDIMEAINDSAPGKLRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYR 239

Query: 596  DDEVSECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLL 417
            D E  + +K++     C DD  G                   Q+G KP  FEVSRV+ LL
Sbjct: 240  DREAFKSEKNDFCGDNCLDDQSG------------------MQTGCKPLNFEVSRVSQLL 281

Query: 416  HQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVAN 237
              LEGKLLSFRMFARDTKASR+IGPPTECF+ HARAAEAYLPC +    SK+MCVELVA+
Sbjct: 282  LHLEGKLLSFRMFARDTKASRSIGPPTECFIFHARAAEAYLPCSEEETKSKIMCVELVAD 341

Query: 236  RFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDK 57
            RFLRKMVRVLV               L++LM             PDGLCLVDVGYTEFD+
Sbjct: 342  RFLRKMVRVLVATAIREAAAGADEDMLLQLMGATCRRATAPPAPPDGLCLVDVGYTEFDR 401

Query: 56   KFCLI 42
            K CLI
Sbjct: 402  KVCLI 406


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  461 bits (1187), Expect = e-127
 Identities = 249/453 (54%), Positives = 301/453 (66%), Gaps = 21/453 (4%)
 Frame = -1

Query: 1334 MIKQPGTAAVLRLGNLMESPAPPPPRDYVQ--YQHTDACSLHRWTARESYEFMYLRPWHR 1161
            M++ P T   LR  NLME+ +P   +  V   Y HTD+C   RWT+RE YEFMY RPWH+
Sbjct: 1    MLRYPTTVRTLR--NLMENSSPTATQQKVHFHYNHTDSCKFSRWTSRECYEFMYARPWHK 58

Query: 1160 VNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDESDKPESECVPAKGRT----GRWERV 996
            V DFY D V G  SL  LFGKE   + + AEI ++ +K E   +P K ++    GRW R 
Sbjct: 59   VVDFYADMVKGHISLSGLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARA 118

Query: 995  TFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAG 816
             F I++SY+G SFDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE CALVAG
Sbjct: 119  NFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAG 178

Query: 815  RTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWR 636
            RTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAPGKIRV S+++VSR+FHPNFSAKWR
Sbjct: 179  RTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWR 238

Query: 635  HYFYIFPFND---ENEDDEV-----------SECKKHNLDKTICHDDPYGERLSEQTCED 498
            HY YIFP +D   E +  ++           +EC K ++DK+  ++             +
Sbjct: 239  HYLYIFPIDDVLGEKQGGQIWIDDSTNVHQQNECDKSDVDKSNVNE-----------INN 287

Query: 497  GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHH 318
             +D  V     G KP  FEV +VN LL QLEGKLLS++MFARDTKASRNIGPPTECFV H
Sbjct: 288  ENDKLVH----GNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFH 343

Query: 317  ARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDX 138
            ARA E  +PC K G   K MC+ELVANRFLRKMVRVLV              AL+KLMD 
Sbjct: 344  ARAIETSIPCAKDGSHMKTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDA 403

Query: 137  XXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 39
                       PDGLCLVDVGYT++D + CLIP
Sbjct: 404  TCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  461 bits (1187), Expect = e-127
 Identities = 239/415 (57%), Positives = 288/415 (69%), Gaps = 10/415 (2%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVN-TNDG 1077
            Y  Y HTD+C   RWTARES++FMY RPW  V+DFY + VNGR S  +LF  +++   D 
Sbjct: 34   YFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRSQMHFVRDD 93

Query: 1076 AEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESAL 897
            A+I ++S+K E E    + R GRW RV FKI +SY+G SFDGWQKQP LNTVQGLVE +L
Sbjct: 94   AKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSL 153

Query: 896  GKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKA 717
            GKFVDEKKAQ LKE   PLEGCA+VAGRTDKGV+AL QVC+FYTWRKDV+  +IEDA+ +
Sbjct: 154  GKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINS 213

Query: 716  AAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--------ENED-DEVSECKKHN 564
            +APGKIRV SVS+VSR FHPNFSAKWR Y YIFP ND        ++ED + +   +K++
Sbjct: 214  SAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSYEKYD 273

Query: 563  LDKTICHDDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFR 384
              +  C +    E + E    D D+      +   KP  F + RVN LL QLEGKLLS++
Sbjct: 274  EQRNGCAELTSEEHVEELITSDKDE-----LEGAKKPRIFSICRVNQLLQQLEGKLLSYK 328

Query: 383  MFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 204
            +FARDTKASRN+GPPTECF++HARA EA LPCP  G G KVMCVELVANRFLRKMVRVLV
Sbjct: 329  IFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMVRVLV 388

Query: 203  XXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 39
                          AL+KLMD            PDGLCL DVGYTEFD + C++P
Sbjct: 389  ATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIVP 443


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  461 bits (1186), Expect = e-127
 Identities = 254/440 (57%), Positives = 294/440 (66%), Gaps = 7/440 (1%)
 Frame = -1

Query: 1340 RGMIKQPGTAAVLRLGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHR 1161
            R  +  P +A    L  LME+ A    +DY+ Y HTD C   RWTARESY+FMY RPW  
Sbjct: 6    RARLVSPSSAG-FGLKILMENRAQR--KDYLHYNHTDRCRSARWTARESYQFMYGRPWQE 62

Query: 1160 VNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDESDKPESECVPAKGRTGRWERVTFKI 984
            V DFY  AVNGR SL  L G E+   +D AE     +  E      K +TGRW R TFKI
Sbjct: 63   VLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKI 122

Query: 983  LISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDK 804
            ++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEKKAQ+LK+K LPLEGCALVAGRTDK
Sbjct: 123  VLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDK 182

Query: 803  GVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFY 624
            GVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R +SVSQVSR FHPNFSAKWR Y Y
Sbjct: 183  GVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLY 242

Query: 623  IFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYV------ETQQSG 462
            I P ND  E+ E       N++     +    E  + + C DG  D +      E   S 
Sbjct: 243  ILPLND-GENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSA 301

Query: 461  TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPK 282
             KP TF ++RVN LL +LEGKLLS++MFARDTKASRN GPPTECFV+HARAAE  LPC +
Sbjct: 302  DKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLE 361

Query: 281  GGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXP 102
             GVG  VMCVELVANRFLRKMVRVLV              AL++LMD            P
Sbjct: 362  QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPP 421

Query: 101  DGLCLVDVGYTEFDKKFCLI 42
            DGL LVDVGYT+FD + C I
Sbjct: 422  DGLSLVDVGYTDFDSQICFI 441


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  461 bits (1185), Expect = e-127
 Identities = 242/413 (58%), Positives = 288/413 (69%), Gaps = 9/413 (2%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGA 1074
            YV Y HT      RWTARES++FMY RPW +V DFY + V GR SL  L G E +     
Sbjct: 23   YVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDG 82

Query: 1073 EIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALG 894
            EI++ SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG
Sbjct: 83   EIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLG 142

Query: 893  KFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAA 714
            +FVDE+KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  A
Sbjct: 143  RFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGA 202

Query: 713  APGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLD-KTICHDD 537
            APGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE   + +D + I  ++
Sbjct: 203  APGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE---NEMDIQKISFNE 259

Query: 536  PYGERLSEQTCEDGDDDYVETQ--------QSGTKPFTFEVSRVNHLLHQLEGKLLSFRM 381
             YGE+ SE   +    +  E          +S  KP TF +SRV+ LL QLEGKLLS+++
Sbjct: 260  KYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKI 319

Query: 380  FARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVX 201
            FARDTKASRNIGPPTECFV HARA EA L     G G+KVMC+ELVANRFLRKMVRVLV 
Sbjct: 320  FARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVA 379

Query: 200  XXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
                         AL+KLMD            PDGLCL+DVG+TEFD + C I
Sbjct: 380  TSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 432


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  460 bits (1183), Expect = e-127
 Identities = 253/440 (57%), Positives = 294/440 (66%), Gaps = 7/440 (1%)
 Frame = -1

Query: 1340 RGMIKQPGTAAVLRLGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHR 1161
            R  +  P +A    L  LME+ A    +DY+ Y HTD C   RWTARESY+FMY RPW  
Sbjct: 6    RARLVSPSSAG-FGLKILMENRAQR--KDYLHYNHTDRCRSARWTARESYQFMYGRPWQE 62

Query: 1160 VNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDESDKPESECVPAKGRTGRWERVTFKI 984
            V DFY  AVNGR SL  L G E+   +D AE     +  E      K +TGRW R TFKI
Sbjct: 63   VLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKI 122

Query: 983  LISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDK 804
            ++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEKKAQ+LK+K LPLEGCALVAGRTDK
Sbjct: 123  VLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDK 182

Query: 803  GVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFY 624
            GVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R +SVSQVSR FHPNFSAKWR Y Y
Sbjct: 183  GVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLY 242

Query: 623  IFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYV------ETQQSG 462
            I P ND  E+ E       N++     +    E  + + C DG  D +      +   S 
Sbjct: 243  ILPLND-GENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVSA 301

Query: 461  TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPK 282
             KP TF ++RVN LL +LEGKLLS++MFARDTKASRN GPPTECFV+HARAAE  LPC +
Sbjct: 302  DKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLE 361

Query: 281  GGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXP 102
             GVG  VMCVELVANRFLRKMVRVLV              AL++LMD            P
Sbjct: 362  QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPP 421

Query: 101  DGLCLVDVGYTEFDKKFCLI 42
            DGL LVDVGYT+FD + C I
Sbjct: 422  DGLSLVDVGYTDFDSQICFI 441


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  459 bits (1182), Expect = e-126
 Identities = 247/453 (54%), Positives = 300/453 (66%), Gaps = 21/453 (4%)
 Frame = -1

Query: 1334 MIKQPGTAAVLRLGNLMESPAPPPPRDYVQ--YQHTDACSLHRWTARESYEFMYLRPWHR 1161
            M++ P T   LR  NLME+P+    +  V   Y HTD+C   RWT+RE YEFMY R WH+
Sbjct: 1    MLRYPTTVRTLR--NLMENPSQTAAQQKVHFHYNHTDSCKFSRWTSRECYEFMYARLWHK 58

Query: 1160 VNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDESDKPESECVPAKGRT----GRWERV 996
            V DFY D V G  SL +LFGKE   + + AEI ++ +K E   +P K ++    GRW R 
Sbjct: 59   VVDFYADMVKGHTSLSRLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARA 118

Query: 995  TFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAG 816
             F I++SY+G SFDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE CALVAG
Sbjct: 119  NFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAG 178

Query: 815  RTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWR 636
            RTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAPGKIRV S+++VSR+FHPNFSAKWR
Sbjct: 179  RTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWR 238

Query: 635  HYFYIFPFND--------------ENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCED 498
            HY YIFP +D                +  + +EC K ++DK+  ++             D
Sbjct: 239  HYLYIFPIDDVLGEKQRGQIWIDGSTDVHQQNECGKSDIDKSNVNE-----------IND 287

Query: 497  GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHH 318
             +++ V     G KP  FEV +VN LL QLEGKLLS++MFARDTKASRNIGPPTECFV H
Sbjct: 288  ENNELVH----GNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFH 343

Query: 317  ARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDX 138
            ARA E  +PC K G   K MC+ELVANRFLRKMVRVLV              AL+KLMD 
Sbjct: 344  ARAIETSIPCAKDGSLMKTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDA 403

Query: 137  XXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 39
                       PDGLCLVDVGYT++D + CLIP
Sbjct: 404  TCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508784930|gb|EOY32186.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 444

 Score =  457 bits (1177), Expect = e-126
 Identities = 244/427 (57%), Positives = 295/427 (69%), Gaps = 8/427 (1%)
 Frame = -1

Query: 1298 LGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRS 1119
            + ++ME+ A    + YV Y H+D+CS  RWTARESY FMY R W  V DFY + VNGR +
Sbjct: 29   ISSVMENEAEN--KVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLT 86

Query: 1118 LPQLFGKEVNTNDGAEIIDESDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQK 942
            L  LFG E + +D +E ++ SD+        KG R+GRWERVTFKI+ISYNG +FDGWQK
Sbjct: 87   LSTLFGTETSIHDDSETVEVSDE--------KGERSGRWERVTFKIIISYNGGAFDGWQK 138

Query: 941  QPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTW 762
            QP LNTVQ +VE +LG+FVDEKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTW
Sbjct: 139  QPGLNTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTW 198

Query: 761  RKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVS 582
            RKDVK  DIEDA+ + APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E  
Sbjct: 199  RKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQ 256

Query: 581  ECKKHNLDKTICHDDPYGER----LSEQTCEDGDDDYVETQ---QSGTKPFTFEVSRVNH 423
             C+     +    D  Y E+    L     E+ ++  +      ++  KP  F V RVN 
Sbjct: 257  SCENKKEVENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQ 316

Query: 422  LLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELV 243
            LL QLE KLLS++MFARDTKASRNIGPPTECF++HARAAEA +PC   G G +VMCVELV
Sbjct: 317  LLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELV 376

Query: 242  ANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEF 63
            ANRFLRKMVRVLV              AL+KLM             PDGLCLVDVGYTEF
Sbjct: 377  ANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEF 436

Query: 62   DKKFCLI 42
            D + CL+
Sbjct: 437  DPQNCLL 443


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
            gi|508784931|gb|EOY32187.1| Pseudouridine synthase
            isoform 2 [Theobroma cacao]
          Length = 446

 Score =  453 bits (1165), Expect = e-125
 Identities = 244/429 (56%), Positives = 295/429 (68%), Gaps = 10/429 (2%)
 Frame = -1

Query: 1298 LGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRS 1119
            + ++ME+ A    + YV Y H+D+CS  RWTARESY FMY R W  V DFY + VNGR +
Sbjct: 29   ISSVMENEAEN--KVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLT 86

Query: 1118 LPQLFGKEVNTNDGAEIIDESDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQK 942
            L  LFG E + +D +E ++ SD+        KG R+GRWERVTFKI+ISYNG +FDGWQK
Sbjct: 87   LSTLFGTETSIHDDSETVEVSDE--------KGERSGRWERVTFKIIISYNGGAFDGWQK 138

Query: 941  QPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTW 762
            QP LNTVQ +VE +LG+FVDEKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTW
Sbjct: 139  QPGLNTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTW 198

Query: 761  RKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVS 582
            RKDVK  DIEDA+ + APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E  
Sbjct: 199  RKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQ 256

Query: 581  ECKKHNLDKTICHDDPYGER----LSEQTCEDGDDDYVETQ---QSGTKPFTFEVSRVNH 423
             C+     +    D  Y E+    L     E+ ++  +      ++  KP  F V RVN 
Sbjct: 257  SCENKKEVENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQ 316

Query: 422  LLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVE 249
            LL QLE KLLS++MFARDTKASRNIGPPTECF++HARAAEA +PC     G G +VMCVE
Sbjct: 317  LLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVE 376

Query: 248  LVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYT 69
            LVANRFLRKMVRVLV              AL+KLM             PDGLCLVDVGYT
Sbjct: 377  LVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYT 436

Query: 68   EFDKKFCLI 42
            EFD + CL+
Sbjct: 437  EFDPQNCLL 445


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  451 bits (1160), Expect = e-124
 Identities = 236/413 (57%), Positives = 282/413 (68%), Gaps = 8/413 (1%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGA 1074
            YVQY HTD+C   RWTARES++FM+ RPW  V DFY  +VNG+ SL +LFG + +     
Sbjct: 38   YVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQAHDVHCD 97

Query: 1073 EIIDESDKPES--ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESA 900
            + I+E        E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGLVE +
Sbjct: 98   DKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKS 157

Query: 899  LGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALK 720
            LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IEDA+ 
Sbjct: 158  LGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAIN 217

Query: 719  AAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHD 540
              APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    +  ++    H+
Sbjct: 218  DVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEGGIENFSSHE 275

Query: 539  ------DPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMF 378
                  +  GE  SE+  E+      +  Q   KP +F V RVN LL QLEGKLLS++MF
Sbjct: 276  NCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMF 335

Query: 377  ARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXX 198
            ARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKMVRVLV  
Sbjct: 336  ARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVAT 395

Query: 197  XXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 39
                        AL+KLMD            PDGLCLVDVGYTEFD + CLIP
Sbjct: 396  SVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 448


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  451 bits (1159), Expect = e-124
 Identities = 234/404 (57%), Positives = 275/404 (68%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGA 1074
            YV Y HT      RWTARES++FMY RPW +V DFY + V GR SL  L G E +     
Sbjct: 23   YVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDG 82

Query: 1073 EIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALG 894
            EI++ SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG
Sbjct: 83   EIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLG 142

Query: 893  KFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAA 714
            +FVDE+KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  A
Sbjct: 143  RFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGA 202

Query: 713  APGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDP 534
            APGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE               
Sbjct: 203  APGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE--------------- 247

Query: 533  YGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASR 354
                       + D   +   ++  KP TF +SRV+ LL QLEGKLLS+++FARDTKASR
Sbjct: 248  ----------NEMDIQKISFNENRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASR 297

Query: 353  NIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXX 174
            NIGPPTECFV HARA EA L     G G+KVMC+ELVANRFLRKMVRVLV          
Sbjct: 298  NIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAG 357

Query: 173  XXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
                AL+KLMD            PDGLCL+DVG+TEFD + C I
Sbjct: 358  AEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 401


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  447 bits (1151), Expect = e-123
 Identities = 239/422 (56%), Positives = 283/422 (67%), Gaps = 17/422 (4%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN--- 1083
            YVQY HTD+C   RWTARES++FM+ RPW  V DFY  +VNG+ SL +LFG +V      
Sbjct: 38   YVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFTMEL 97

Query: 1082 DGAEIIDESDKPES--------ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLN 927
              A  +   DK E         E V    ++GRW RVTFKI++SY+G SFDGWQKQP LN
Sbjct: 98   KKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLN 157

Query: 926  TVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVK 747
            TVQGLVE +LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK
Sbjct: 158  TVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVK 217

Query: 746  ALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKH 567
              +IEDA+   APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    + 
Sbjct: 218  PHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEG 275

Query: 566  NLDKTICHD------DPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLE 405
             ++    H+      +  GE  SE+  E+      +  Q   KP +F V RVN LL QLE
Sbjct: 276  GIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLE 335

Query: 404  GKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLR 225
            GKLLS++MFARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLR
Sbjct: 336  GKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLR 395

Query: 224  KMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCL 45
            KMVRVLV              AL+KLMD            PDGLCLVDVGYTEFD + CL
Sbjct: 396  KMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCL 455

Query: 44   IP 39
            IP
Sbjct: 456  IP 457


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  441 bits (1134), Expect = e-121
 Identities = 239/426 (56%), Positives = 285/426 (66%), Gaps = 4/426 (0%)
 Frame = -1

Query: 1307 VLRLGNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNG 1128
            + R+G ++E       +DYV Y H+D C   RWTARESY+FMY RPW +V DFY + VNG
Sbjct: 20   IRRVGVVVEMETHSTNKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNG 79

Query: 1127 RRSLPQLFGK----EVNTNDGAEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNS 960
              S   LF      +V+ +D    I E    + +   ++ R+GRW R TFK+++ Y+G S
Sbjct: 80   TTSFSSLFPLHKKYQVDDDDYDAEIPEISDDKVKLKKSEERSGRWARATFKVVLGYHGAS 139

Query: 959  FDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQV 780
            FDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE C +VAGRTDKGVTAL QV
Sbjct: 140  FDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQV 199

Query: 779  CAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDEN 600
            C+FYTWRKD+   DIE+A+  AA GK++  SVS+VSR FHPNFSAKWR Y YIFPFNDE 
Sbjct: 200  CSFYTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDE- 258

Query: 599  EDDEVSECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHL 420
            ED+E S     NL+     +   GE   E       DD  E  +SG KP +F VSRV+ L
Sbjct: 259  EDEEQSNKNGENLETYEKIESGCGEWNDESFGNLIIDD-SEELESGKKPSSFSVSRVDQL 317

Query: 419  LHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVA 240
            L  LEGKLLS++MFARDTKASRN GPPTECF++HARAAEA LP      G K+MCVELVA
Sbjct: 318  LRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVELVA 377

Query: 239  NRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFD 60
            NRFLRKMVRVLV              AL+KLMD            PDGLCLVDVGY+EF 
Sbjct: 378  NRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSEFK 437

Query: 59   KKFCLI 42
               CLI
Sbjct: 438  PNNCLI 443


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  441 bits (1134), Expect = e-121
 Identities = 243/428 (56%), Positives = 286/428 (66%), Gaps = 12/428 (2%)
 Frame = -1

Query: 1286 MESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQL 1107
            MES +    + YV Y HTD+C   RWTA+ESYEFM  RPW  V DFY D V+GR +L  L
Sbjct: 34   MESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDL 93

Query: 1106 FGKEVNTNDGAEIIDESDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQ 939
            FG E  T   +   DE++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQ
Sbjct: 94   FGTE-RTRTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQ 152

Query: 938  PSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWR 759
            P LNTVQGLVE  LG FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWR
Sbjct: 153  PDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWR 212

Query: 758  KDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEV 585
            KDVK  +IEDA+ +AAPGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    
Sbjct: 213  KDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSID 272

Query: 584  SECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLL 417
            SE +  N   +    +  G++     C +  ++ +   + G     KP  F + RVN LL
Sbjct: 273  SEVEVENFHTS----NNVGKQ--SNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLL 326

Query: 416  HQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELV 243
             +LEGKLLS++ FARDTKASRNIGPPTECF++HARA EA LPCP    G G KVMCVELV
Sbjct: 327  QRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELV 386

Query: 242  ANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEF 63
            ANRFLRKMVRVLV              AL+KL+D            P+GLCLVDVGYT F
Sbjct: 387  ANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNF 446

Query: 62   DKKFCLIP 39
            D +  LIP
Sbjct: 447  DPQNSLIP 454


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  441 bits (1134), Expect = e-121
 Identities = 243/428 (56%), Positives = 286/428 (66%), Gaps = 12/428 (2%)
 Frame = -1

Query: 1286 MESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQL 1107
            MES +    + YV Y HTD+C   RWTA+ESYEFM  RPW  V DFY D V+GR +L  L
Sbjct: 27   MESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDL 86

Query: 1106 FGKEVNTNDGAEIIDESDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQ 939
            FG E  T   +   DE++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQ
Sbjct: 87   FGTE-RTRTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQ 145

Query: 938  PSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWR 759
            P LNTVQGLVE  LG FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWR
Sbjct: 146  PDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWR 205

Query: 758  KDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEV 585
            KDVK  +IEDA+ +AAPGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    
Sbjct: 206  KDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSID 265

Query: 584  SECKKHNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLL 417
            SE +  N   +    +  G++     C +  ++ +   + G     KP  F + RVN LL
Sbjct: 266  SEVEVENFHTS----NNVGKQ--SNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLL 319

Query: 416  HQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELV 243
             +LEGKLLS++ FARDTKASRNIGPPTECF++HARA EA LPCP    G G KVMCVELV
Sbjct: 320  QRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELV 379

Query: 242  ANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEF 63
            ANRFLRKMVRVLV              AL+KL+D            P+GLCLVDVGYT F
Sbjct: 380  ANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNF 439

Query: 62   DKKFCLIP 39
            D +  LIP
Sbjct: 440  DPQNSLIP 447


>ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
            gi|561033630|gb|ESW32209.1| hypothetical protein
            PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  441 bits (1133), Expect = e-121
 Identities = 235/405 (58%), Positives = 279/405 (68%), Gaps = 1/405 (0%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDG 1077
            +V Y HTD     RWTARES++FMY RPW RVNDFY + V    SL  LFG + +  ++ 
Sbjct: 48   HVHYNHTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHND 107

Query: 1076 AEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESAL 897
              I   SD+ E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQG+VE++L
Sbjct: 108  TGIAALSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASL 167

Query: 896  GKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKA 717
            GKFVDEKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  
Sbjct: 168  GKFVDEKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQ 227

Query: 716  AAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDD 537
            AA GK+RV SVS+VSR FHPNFSAKWRHY YIFP  +   D       + N +   C   
Sbjct: 228  AALGKLRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRD-------QSNSNGESCDIS 280

Query: 536  PYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKAS 357
             Y E + + + +DG    +E Q+   K + F VS+VN LL +LEGKLLS++MFARDTKAS
Sbjct: 281  KYNE-MHDSSSKDG----IENQE---KSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKAS 332

Query: 356  RNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXX 177
            RN GPPTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV         
Sbjct: 333  RNDGPPTECFVYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLVATSIREAAA 392

Query: 176  XXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
                 ALIKLMD            PDGLCLVDVGYTEFD + C I
Sbjct: 393  GAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  437 bits (1125), Expect = e-120
 Identities = 232/406 (57%), Positives = 277/406 (68%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1256 DYVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTND 1080
            ++V Y HT      RW ARES+EFMY RPW  VNDFYL+AV G  SLP LFG + V  +D
Sbjct: 29   NHVHYNHTHPSKYTRWNARESFEFMYARPWQLVNDFYLNAVRGNSSLPLLFGVQTVPDHD 88

Query: 1079 GAEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESA 900
             + I   SDK E E   +K R GRW R+ FKI++SY+G SFDGWQKQPSLNTVQ +VE++
Sbjct: 89   DSGISVLSDKTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEAS 148

Query: 899  LGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALK 720
            LGKFVDE K Q+LKEK LP+EGCA VAGRTDKGVTAL QVC+FYTW+KD+   DIEDA+ 
Sbjct: 149  LGKFVDEMKTQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAIN 208

Query: 719  AAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHD 540
              APGK+RV SV +VSR FHPNFSAKWR Y YIFP  DE + D+ S   + + D+ I + 
Sbjct: 209  DGAPGKLRVISVHEVSRAFHPNFSAKWRRYLYIFPLTDEGDKDQ-SGSNEESCDRFIYN- 266

Query: 539  DPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKA 360
                     + C+    D +E +    K + F V +VN LL +LEGKLLS++MFARDTKA
Sbjct: 267  ---------EVCDSVSKDELENEM---KSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKA 314

Query: 359  SRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXX 180
            SRN GPPTECFV+HARA EA LP    G  ++VMC+ELVANRFLRKMVRVLV        
Sbjct: 315  SRNDGPPTECFVYHARAMEARLPTTDNG-EARVMCIELVANRFLRKMVRVLVATTIREAA 373

Query: 179  XXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
                  AL++LMD            PDGLCLVDVGY EFD+K C I
Sbjct: 374  AGAEDDALLRLMDATCRRATAPPAPPDGLCLVDVGYAEFDQKKCFI 419


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  436 bits (1122), Expect = e-120
 Identities = 232/407 (57%), Positives = 274/407 (67%), Gaps = 3/407 (0%)
 Frame = -1

Query: 1253 YVQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTN 1083
            +V Y HT      RWTARES+EFMY RPW RVNDFYL+ V    SLP LFG +   V+ N
Sbjct: 50   HVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGAQTLVVDHN 109

Query: 1082 DGAEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVES 903
            D   I   S   E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQ +VE 
Sbjct: 110  DTG-IAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEG 168

Query: 902  ALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDAL 723
            +LGKFVDEKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+
Sbjct: 169  SLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAI 228

Query: 722  KAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICH 543
              AAPGK+RV SVS+VSR FHPNFSAKWR Y YIFP  +    D+ S+           +
Sbjct: 229  NHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSSD-----------N 277

Query: 542  DDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTK 363
             + Y      +  +    D +E ++   K + F +S+VN LL +LEGKLLS++MFARDTK
Sbjct: 278  GEFYDSFKYNEIHDSASKDELENEK---KSYAFSISKVNRLLRKLEGKLLSYKMFARDTK 334

Query: 362  ASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXX 183
            ASRN GPPTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV       
Sbjct: 335  ASRNDGPPTECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLVATSIREA 394

Query: 182  XXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
                   ALIKLMD            PDGLCLVDVGYTEF+ + C I
Sbjct: 395  AAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
            gi|462419663|gb|EMJ23926.1| hypothetical protein
            PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  430 bits (1106), Expect = e-118
 Identities = 228/415 (54%), Positives = 279/415 (67%), Gaps = 12/415 (2%)
 Frame = -1

Query: 1250 VQYQHTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGK----EVNTN 1083
            +QY HTD CS  RWT +E ++FM  RPW +V DFY D V  R+ L  L GK    + N N
Sbjct: 7    IQYNHTDPCSFARWTTKECFQFMSARPWQQVMDFYSDVVKDRKPLSALLGKACLSKSNIN 66

Query: 1082 DGAEIIDESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVES 903
            +  E +           P++ + GRW R+TFKI++SY+G SFDGWQ+QP LNTVQ +VE 
Sbjct: 67   NRLESLP----------PSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEK 116

Query: 902  ALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDAL 723
            +LGKFVDE+KAQ+LK+K LPLEG ALVAGRTDKGVTA+ QVC+FYTWRKDVK+ DI DA+
Sbjct: 117  SLGKFVDERKAQMLKDKGLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAI 176

Query: 722  KAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICH 543
             +AAPGK+RV SV++VSR FHPNF+AKWRHY YIFPFNDE ED E S     N       
Sbjct: 177  NSAAPGKLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDE-EDMEQSNQSGENAQNFKSL 235

Query: 542  DDPYGERLSEQTCED--------GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSF 387
            ++ +  +     C +         D++ +ET     KP  F VSRVN LL +LEGKLLS+
Sbjct: 236  ENYHEHKNGCDQCNEANVGNLVINDNEDLET----LKPREFTVSRVNQLLQKLEGKLLSY 291

Query: 386  RMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVL 207
            +MFARDTK SRN GPPTECF++HARA E+ LPC +   G +VMC+ELVANRFLR+MVRVL
Sbjct: 292  KMFARDTKPSRNEGPPTECFLYHARAKESKLPCSEHEKGRRVMCIELVANRFLRRMVRVL 351

Query: 206  VXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 42
            V              AL+KLMD            PDGLCLVDVGY EFD + CLI
Sbjct: 352  VATSIREAAAGADEDALLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406