BLASTX nr result
ID: Mentha27_contig00011729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00011729
(2968 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 1095 0.0
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1046 0.0
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 1030 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 1026 0.0
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 1024 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 1021 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 1009 0.0
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 1002 0.0
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 1001 0.0
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 999 0.0
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 999 0.0
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] 997 0.0
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 997 0.0
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 989 0.0
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 973 0.0
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 960 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 952 0.0
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 944 0.0
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 941 0.0
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 938 0.0
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
Length = 883
Score = 1095 bits (2832), Expect = 0.0
Identities = 578/850 (68%), Positives = 651/850 (76%), Gaps = 17/850 (2%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNA 2325
M VEA + + M+D+DD+D AP+VFKR PE K S QKH+ Q+GR + +
Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLS-SQKHNAQVGRQSSDV 59
Query: 2324 RPQNGQNNSFQKSKM--GPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTG 2151
RPQNG N + QK K SS PP R L+SPK SNS + +KS +S PSTS+ G
Sbjct: 60 RPQNGTNANAQKGKSVTSSSSMKPPVRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVG 119
Query: 2150 ELNSVKRQIAGENSLNKSTSGPXXXXXXXXXDKPLSARF---SKLNSGNGSKGADALNSG 1980
E SVK I ENS + KPLSAR S N+ N + +A N G
Sbjct: 120 ESKSVKSTIKEENSEDSEDD------------KPLSARQVAGSSKNNPNQTNKPNAPNLG 167
Query: 1979 QNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWA-ECGQNGSASGERKP 1830
+ S +PK EDSDD++P A EKKPL A + +NGSAS ERKP
Sbjct: 168 KKSNVPKPEDSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVARKPDKNGSASTERKP 227
Query: 1829 STVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKK 1650
STVL+KR D V S+ K+PKLS+ S+ K+K++S K E+K EDDED VP+SQR KK
Sbjct: 228 STVLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKK 286
Query: 1649 TVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVH 1473
+ EKK S +K K K NKK ++V K++ YS+SSK+PPSSG+GQKWTTLVH
Sbjct: 287 STTPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKWTTLVH 346
Query: 1472 NGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRK 1293
NGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AVML+T+Y+ KP+FKENFM DW+K
Sbjct: 347 NGVIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKK 406
Query: 1292 ILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAVLDGV 1113
ILGKNH+IQSLEHCDFTPIYEWH KYMWAVLDGV
Sbjct: 407 ILGKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKALKEEKLKLEEKYMWAVLDGV 466
Query: 1112 KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIR 933
+EKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGRDAPIPECPI GE WKEIR
Sbjct: 467 REKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGRDAPIPECPIEGERWKEIR 526
Query: 932 HDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRD 753
HDNTVTWLAYW+DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYIQGIR AYTRD
Sbjct: 527 HDNTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRD 586
Query: 752 FTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 573
F SKDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL
Sbjct: 587 FVSKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 646
Query: 572 GKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFR 393
GKDSIRYQNEVEVE AVF+AIQQFR+GKKGGDD+FDKLDTSKLNAHLKELMPGLTAKVFR
Sbjct: 647 GKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFR 706
Query: 392 TYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRTVSKSHSAQMTRLNEKI 213
TYNASITLDD L+RETKGG++AEK+V Y HANKEVAIICNHQRTVSK+HSAQM RL+EKI
Sbjct: 707 TYNASITLDDKLSRETKGGDLAEKVVTYNHANKEVAIICNHQRTVSKTHSAQMLRLDEKI 766
Query: 212 DELKSVLEELRTDLARAKKGKPPLKSSDGKVKRNLNPESLEKKISQTTAKIEKMERDKET 33
DELK VLEEL+TDL RA+KGKP L +DGK KRN+NPE+LE+KI+QTTAKIEKMERDKET
Sbjct: 767 DELKGVLEELKTDLGRARKGKPLLAGADGKAKRNINPEALERKIAQTTAKIEKMERDKET 826
Query: 32 KEDLKTVALG 3
KEDLKTVALG
Sbjct: 827 KEDLKTVALG 836
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 1046 bits (2704), Expect = 0.0
Identities = 556/868 (64%), Positives = 643/868 (74%), Gaps = 35/868 (4%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC DD+D++D P+VFKR N ET+K QK D Q R ++R
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 2321 PQNGQNNSFQKSKMGPSSR---------TPPDR-----SPLMSPKLSNSPTRGLAVKSAM 2184
P NG+++S QK +M P S+ +PP + SPL SPK+S S + V S
Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120
Query: 2183 PDSIPSTSMTGELNSVKRQIAG------ENSLNKSTSGPXXXXXXXXXDKPLSARFSKLN 2022
+S PSTS + ++ + + ++S + S KPLS R +
Sbjct: 121 ANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR----H 176
Query: 2021 SGNGSKGADALNSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAE 1869
S + SKG S + SK P++EDSDD+ P + KPL +
Sbjct: 177 SASSSKGNTNQVSKEGSK-PENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKK 235
Query: 1868 CGQNGSASGERKP---STVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIK 1698
NGSA + +P S + KR D+K ++ S K+PKLS + K++S K E K
Sbjct: 236 LQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPK 295
Query: 1697 -EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSK 1521
E+DD+DH+PISQR+KK+ E KS+ +KK TK + KK NKK +KV+KNSKYS+SSK
Sbjct: 296 AEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSK 355
Query: 1520 VPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEY 1341
VPPSSGEG+KW L HNGVIFPPPYKPHG+K+LYKGKPV LTPEQEEVATMFAVMLDT+Y
Sbjct: 356 VPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDY 415
Query: 1340 MDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXX 1161
M+KP+FKENF DW+KILGKNH+IQ+LE+CDF+PIYEWH
Sbjct: 416 MNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEE 475
Query: 1160 XXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDA 981
KYMWA +DG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIG+DA
Sbjct: 476 KLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDA 535
Query: 980 PIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 801
PIPECP+PGE WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR
Sbjct: 536 PIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKAR 595
Query: 800 LLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 621
LLKDYIQGIR AYT+DF SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 596 LLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 655
Query: 620 ENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLN 441
ENVEPVPPNILKFDFLGKDSIRYQNEVEVE AVF+AIQQFR+GK+G D+FD LDTSKLN
Sbjct: 656 ENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLN 715
Query: 440 AHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRT 261
AHLKELMPGLTAKVFRTYNASITLDDML+RETKGG+VAEK+VVYQHANKEVAIICNHQRT
Sbjct: 716 AHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRT 775
Query: 260 VSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKS--SDGKVKRNLNPESLEK 87
VSKSHSAQM RLNEKI+ELK+V+EEL++DL+R KKGKPPLKS +DGK KRNLNPESLEK
Sbjct: 776 VSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEK 835
Query: 86 KISQTTAKIEKMERDKETKEDLKTVALG 3
KI+QT AKIEKMERDKETKEDLKTVALG
Sbjct: 836 KIAQTNAKIEKMERDKETKEDLKTVALG 863
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 1030 bits (2664), Expect = 0.0
Identities = 556/860 (64%), Positives = 637/860 (74%), Gaps = 27/860 (3%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAV+AC K+K MD++D++D P+VFKR N +TKKS Q++D Q GR +
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNS-----PTRGLAVKSAMPDSIPSTSM 2157
NGQ++S K K +++ +SP+ SPK S S P V S+ D +S
Sbjct: 60 STNGQSSSASKGK---TTKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSK 116
Query: 2156 TGELNSVKRQIAGENSLNKSTSGPXXXXXXXXXDKPLSARF----SKLNSGNGSKGADAL 1989
+N VK E L + P KPLSAR +K +S N +KG +
Sbjct: 117 QNTINVVKE----EKELVNPAAEPYGDSEDE---KPLSARLFTGLTKGSSNNANKGL--I 167
Query: 1988 NSGQNS-KIPK------SEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQN 1857
NS S +PK S+DSDD++P + K L + QN
Sbjct: 168 NSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQN 227
Query: 1856 GSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEED-DED 1680
GS + K S + KR + +VK + SS K+PKLS+ S NK++S KAE K +D D+D
Sbjct: 228 GSINRGSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDD 287
Query: 1679 HVPISQRMKKTVLLEKKSAVVK-KMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSG 1503
HVPISQRMKK+ KS+ K K+TK + KK +KK +KV+K SKYS+SSKVPPSSG
Sbjct: 288 HVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSG 347
Query: 1502 EGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKF 1323
EG+KW TLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATMFAVMLDT+YM K KF
Sbjct: 348 EGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKF 407
Query: 1322 KENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXX 1143
KENFMDDWRKILGKNH+IQ+LE CDFTPIYEWH
Sbjct: 408 KENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEE 467
Query: 1142 KYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECP 963
KYMWA+++GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDITINIG+DAPIPECP
Sbjct: 468 KYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECP 527
Query: 962 IPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 783
IPGESWKEIRHDNTVTWLA+WNDPI P+EFKYVFLAASSSLKGQSDKEKYEKARLLKD+I
Sbjct: 528 IPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFI 587
Query: 782 QGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPV 603
QGIR AYT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP
Sbjct: 588 QGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPK 647
Query: 602 PPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKEL 423
PP+ILKFDFLGKDSIRYQNEVEVE+ V++AIQQFRTGK+GGDD+FDKLDTSKLNAHLK L
Sbjct: 648 PPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGL 707
Query: 422 MPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRTVSKSHS 243
MPGLTAKVFRTYNASITLD+ML+RETKGG VAEKIVVYQHANKEVAIICNHQRTVSKSH
Sbjct: 708 MPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHP 767
Query: 242 AQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKVKRNLNPESLEKKISQTTAK 63
AQMTRLN KIDELK +L+ L+TDLARAKKGKPPL+ +DGK KRNL PE+LE+KI QT AK
Sbjct: 768 AQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAK 827
Query: 62 IEKMERDKETKEDLKTVALG 3
IEKMERDKETKE LKT+ALG
Sbjct: 828 IEKMERDKETKEGLKTIALG 847
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 1026 bits (2654), Expect = 0.0
Identities = 545/879 (62%), Positives = 631/879 (71%), Gaps = 46/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK Q+H Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+N+S QK ++ PS++TPP +SPL SPK SNS + + SA +S PS S T
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARF----SKLNSGNGSKGADALN 1986
+ + S P KPLSAR SK S + +K
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180
Query: 1985 SGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE-- 1839
S + I +SEDS+D+ P EKKPL A+ NGSAS +
Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSP 240
Query: 1838 -RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQ 1662
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+SQ
Sbjct: 241 MNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 300
Query: 1661 RMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPEK 1557
R KK+ + K SA VKK + KK NKK +K
Sbjct: 301 RGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360
Query: 1556 VLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEV 1377
V+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEV
Sbjct: 361 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 420
Query: 1376 ATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXX 1197
ATMFAVMLDT+YM+KP+FKENF DW+K+LGKNH IQ+LE CDF PIYEWH
Sbjct: 421 ATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQ 480
Query: 1196 XXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1017
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR
Sbjct: 481 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540
Query: 1016 PSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLK 837
P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS+LK
Sbjct: 541 PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLK 600
Query: 836 GQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKDD 660
GQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKDD
Sbjct: 601 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660
Query: 659 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGG 480
DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 661 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGS 720
Query: 479 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHA 300
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML+++T GGEVAEK+VVYQHA
Sbjct: 721 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHA 780
Query: 299 NKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKV 120
NKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKP K +DGK
Sbjct: 781 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKP 840
Query: 119 KRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVALG 3
KRNLNPE+LE+KI+QT AKIEKMERDKETKEDLKTVALG
Sbjct: 841 KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALG 879
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 1024 bits (2647), Expect = 0.0
Identities = 544/879 (61%), Positives = 629/879 (71%), Gaps = 46/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+N+S QK ++ PS++TPP +SPL SPK SNS + + S +S PS S T
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARF----SKLNSGNGSKGADALN 1986
+ + S P KPLSAR SK S + +K
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180
Query: 1985 SGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE-- 1839
S + I +SEDS+D+ P EKKPL A+ NGSAS +
Sbjct: 181 SIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSP 240
Query: 1838 -RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQ 1662
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+SQ
Sbjct: 241 MNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 300
Query: 1661 RMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPEK 1557
R KK+ + K SA VKK + KK NKK +K
Sbjct: 301 RGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360
Query: 1556 VLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEV 1377
V+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEV
Sbjct: 361 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 420
Query: 1376 ATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXX 1197
ATMFAVMLDT+YM+KP+FKENF DW+K+LGKNH IQ+LE CDF PIYEWH
Sbjct: 421 ATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQ 480
Query: 1196 XXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1017
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR
Sbjct: 481 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540
Query: 1016 PSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLK 837
P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS+LK
Sbjct: 541 PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLK 600
Query: 836 GQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKDD 660
GQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKDD
Sbjct: 601 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660
Query: 659 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGG 480
DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVF+AI QFR+GK+G
Sbjct: 661 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGS 720
Query: 479 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHA 300
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML+++T GGEVAEK+VVYQHA
Sbjct: 721 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHA 780
Query: 299 NKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKV 120
NKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKP K +DGK
Sbjct: 781 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKP 840
Query: 119 KRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVALG 3
KRNLNPE+LE+KI+QT AKIEKMERDKETKEDLKTVALG
Sbjct: 841 KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALG 879
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 1021 bits (2640), Expect = 0.0
Identities = 544/879 (61%), Positives = 628/879 (71%), Gaps = 46/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D+ P++FKR N E KK QK D Q + R
Sbjct: 1 MAVEACTTNL-MEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVR 59
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS++TPP +SPL SPK SNS + + S +S PS S T
Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARF----SKLNSGNGSKGADALN 1986
+ + S P KPLSAR SK S + +K
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179
Query: 1985 SGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE-- 1839
S + I +SEDS+D+ P EKKPL A+ QNGSAS +
Sbjct: 180 SIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGP 239
Query: 1838 -RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQ 1662
K +++ KR + K + SS K+PKLS NK+++ K E K EDD+D++P+SQ
Sbjct: 240 MNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQ 299
Query: 1661 RMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPEK 1557
R KK+ + K S VKK + + KK NK +K
Sbjct: 300 RGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKK 359
Query: 1556 VLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEV 1377
V+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEV
Sbjct: 360 VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEV 419
Query: 1376 ATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXX 1197
ATMFAVMLDT+YM+KP FKENF DW+KILGKNH+IQ+LE CDF PIYEWH
Sbjct: 420 ATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQ 479
Query: 1196 XXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1017
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR
Sbjct: 480 MTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 539
Query: 1016 PSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLK 837
P DITINIG+DAPIPECPIPGE WKE+R+ NTVTWLAYWNDPIN KEFKYVFLAASS+LK
Sbjct: 540 PRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLK 599
Query: 836 GQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKDD 660
GQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKDD
Sbjct: 600 GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 659
Query: 659 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGG 480
DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGS 719
Query: 479 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHA 300
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGGEVAE +VVYQHA
Sbjct: 720 EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHA 779
Query: 299 NKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKV 120
NKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K +DGK
Sbjct: 780 NKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKA 839
Query: 119 KRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVALG 3
KRNLNPE+LE+KI+QT AKIEKMERDKETKEDLKTVALG
Sbjct: 840 KRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALG 878
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 1009 bits (2609), Expect = 0.0
Identities = 540/881 (61%), Positives = 627/881 (71%), Gaps = 48/881 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTPNL-MEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 59
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS++TPP +SPL SPK SNS + + S +S PS S T
Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARF----SKLNSGNGSKGADALN 1986
+ + S P KPLSAR SK S + +K
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179
Query: 1985 SGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE-- 1839
S + I +SEDS+D+ P EKKPL A+ QNGS S +
Sbjct: 180 SIRRRVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGP 239
Query: 1838 -RKPSTVLKKRNVDDVKPTDASSSKRPKLSE--TSILHKNKESSTKAEIKEEDDEDHVPI 1668
K +++ KR +VK + SS K+PKLS TSI +K + E K EDD+D++P+
Sbjct: 240 MNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPL 299
Query: 1667 SQRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKP 1563
SQR KK+ + K SA VKK + KK NK
Sbjct: 300 SQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNS 359
Query: 1562 EKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQE 1383
+KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPY PHGVK+LYK +P+ LTPEQE
Sbjct: 360 KKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQE 419
Query: 1382 EVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXX 1203
EVATMFAVMLDT+YM+KP+FKENF DW+K+LGKNH IQ+LE CDF PIYEWH
Sbjct: 420 EVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKK 479
Query: 1202 XXXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 1023
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR
Sbjct: 480 KQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 539
Query: 1022 IRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSS 843
IRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLA+W DPIN KEFKYVFLAASS+
Sbjct: 540 IRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASST 599
Query: 842 LKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEK 666
LKGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEK
Sbjct: 600 LKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 659
Query: 665 DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKK 486
DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVF+AIQQFR+GK+
Sbjct: 660 DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKE 719
Query: 485 GGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQ 306
G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGGEVAEK+VVYQ
Sbjct: 720 GSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQ 779
Query: 305 HANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDG 126
HANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ +EEL+TDL+R KKGKPP K +DG
Sbjct: 780 HANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADG 839
Query: 125 KVKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVALG 3
K KRNLNPE+LE+K++Q AKIEKMERDKETKEDLKTVALG
Sbjct: 840 KPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALG 880
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 1002 bits (2591), Expect = 0.0
Identities = 534/879 (60%), Positives = 625/879 (71%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + I +SEDS+D+ P EKKPL A+ QNGSAS +
Sbjct: 181 -SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS T NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFA MLDT+YM+KP+FKENF DW+KILGKNH IQ+LE CDF PIYEWH
Sbjct: 420 VATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
RP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLAASS+L
Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQ+AVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQ
Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQR 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPE+LE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 1001 bits (2589), Expect = 0.0
Identities = 534/879 (60%), Positives = 626/879 (71%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + I +SEDS+D+ P EKKPL A+ QNGSAS E
Sbjct: 181 -SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASPEG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ V + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKKASTVVSTSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV++ + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFAVMLDT+YM+KP+FKENF DW+KILGKNH IQ+LE CDF PIYEWH
Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
RP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLAASS+L
Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNIKECKYVFLAASSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQS KEKYEKAR+LKDYI GIR AYT+ FT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSVKEKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG++AEK+ VYQH
Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKIAEKVAVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K +DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKDADGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPESLE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 999 bits (2584), Expect = 0.0
Identities = 532/879 (60%), Positives = 624/879 (70%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + + +SEDS+D+ P EKKPL A+ QNGSAS +
Sbjct: 181 -SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFAVMLDT+YM+KP+FKENF DW+K+LGKNH IQ+LE CDF PIYEWH
Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEREKKK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKDERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SS+L
Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTL+VENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLRVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQH
Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPE+LE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 999 bits (2583), Expect = 0.0
Identities = 532/879 (60%), Positives = 623/879 (70%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + + +SEDS+D+ P EKKPL A+ QNGSAS +
Sbjct: 181 -SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFA MLDT+YM+KP+FKENF DW+KILGKNH IQ+LE CDF PIYEWH
Sbjct: 420 VATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SS+L
Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQH
Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPE+LE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
Length = 920
Score = 997 bits (2578), Expect = 0.0
Identities = 533/879 (60%), Positives = 622/879 (70%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + I +SEDS+D+ P EKKPL A+ NGSAS +
Sbjct: 181 -SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFAVMLDT+YM+KP+FKENF DW+K+LGKNH IQ+LE CDF PIYEWH
Sbjct: 420 VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMW ++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKEERLQQEEKYMWVIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
RP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDPIN KE KYVFL ASS+L
Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKERKYVFLGASSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQH
Sbjct: 720 SADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K +DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGADGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPE+LE+KI+QT AKIEKME DK+TKEDLK VAL
Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMEGDKKTKEDLKAVAL 878
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 997 bits (2578), Expect = 0.0
Identities = 534/879 (60%), Positives = 623/879 (70%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + I +SEDS+D+ P EKKPL + QNGSAS +
Sbjct: 181 -SIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++L KR +VK + SS K+ KLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFAVMLDT+YM KP+FKENF DW+K+LGKNH +Q+LE CDF PIYEWH
Sbjct: 420 VATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
Sbjct: 480 QMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
RP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLA+WNDPIN KE KYVFLAASS+L
Sbjct: 540 RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQH
Sbjct: 720 CADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K +DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPESLE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 989 bits (2557), Expect = 0.0
Identities = 529/879 (60%), Positives = 621/879 (70%), Gaps = 47/879 (5%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVEAC M+D++D++ P++FKR N E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 2142
P NG+++S QK ++ PS+ TPP +SPL SPK SNS + + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 2141 SVKRQIAGENSLNKSTSGPXXXXXXXXXD----KPLSARFSKLNSGNGS-----KGADAL 1989
+ + S P KPL AR S +S S +G D+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 1988 NSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGE- 1839
S + + +SEDS+D+ P EKKPL A+ QNGSAS +
Sbjct: 181 -SIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDG 239
Query: 1838 --RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPIS 1665
K +++ KR +VK + SS K+PKLS NK+++ K E K EDD+D++P+S
Sbjct: 240 PMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299
Query: 1664 QRMKKT-------------------------VLLEKKSAVVKKMTKPTPAITKKFNKKPE 1560
QR KK+ + K SA VKK + KK NKK +
Sbjct: 300 QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359
Query: 1559 KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 1380
KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGVK+LYK +P+ LTPEQEE
Sbjct: 360 KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKQQPLTLTPEQEE 419
Query: 1379 VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 1200
VATMFAVMLDT+YM KP+FKENF DW+K+LGKNH +Q+LE CDF PIYEWH
Sbjct: 420 VATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRK 479
Query: 1199 XXXXXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1020
KYM A++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI
Sbjct: 480 QMTTEEKKALKEERLQQEEKYMRAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRI 539
Query: 1019 RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 840
P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLA SS+L
Sbjct: 540 HPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTL 599
Query: 839 KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTS-KDPTKKQIAVATYLIDKLALRAGNEKD 663
KGQSDKEKYEKARLLKDYI GIR AYT+DFT+ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659
Query: 662 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKG 483
DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVF+AIQQFR+GK+G
Sbjct: 660 DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719
Query: 482 GDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQH 303
+D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ETKGG+VAEK+ VYQH
Sbjct: 720 SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779
Query: 302 ANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGK 123
ANKEVAIICNHQRTVSKSHSAQM+RLNEKIDELK+ LEEL+TDL+RAKKGKPP K DG+
Sbjct: 780 ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGE 839
Query: 122 VKRNLNPESLEKKISQTTAKIEKMERDKETKEDLKTVAL 6
KRNLNPE+LE+KI+QT AKIEKMERDK+TKEDLK VAL
Sbjct: 840 PKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVAL 878
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 973 bits (2516), Expect = 0.0
Identities = 518/859 (60%), Positives = 620/859 (72%), Gaps = 26/859 (3%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXN-PETKKSLPQKHDQQLGRPALNA 2325
MAVEA K D DD+D P+VFKR E KK+ Q+ D Q GR +
Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60
Query: 2324 RPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGEL 2145
R NGQ+++ K+K SS++PP +SP++SPK S S T+ L VKS + + STS+ +
Sbjct: 61 RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120
Query: 2144 NSVKRQ-----IAGENSLNKSTSGPXXXXXXXXXDKPLSARFSKLNSGNGSKGADALNSG 1980
+Q + S K T+ P PLSAR + S G+KGA
Sbjct: 121 KQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGI-SNQGNKGASTSAPA 179
Query: 1979 QNSK-IPKSE------DSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSA 1848
Q+ + +PK+E D DD+ P EKKPL ++ QNGS
Sbjct: 180 QSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSI 239
Query: 1847 --SGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHV 1674
++ ST+ KR +D +D SS+K+PK S+ K K+ + KAE K ++D+DH+
Sbjct: 240 MKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAE-KADEDDDHM 298
Query: 1673 PISQRMKKTVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEG 1497
PI+QRMKK+ K S++ +K TK + KK NKK +K +K+SKY +S+KVPPSSG+G
Sbjct: 299 PIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDG 358
Query: 1496 QK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFK 1320
QK W+TLVHNGVIFP PY PHGVK+LY G+PV LTPEQEEVATMFAVM DT+YM K +FK
Sbjct: 359 QKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFK 418
Query: 1319 ENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXK 1140
+NF +DW K+LGKNH I+ L+ CDFTPIYEWH K
Sbjct: 419 KNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEK 478
Query: 1139 YMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPI 960
+MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINIG+DAPIPECPI
Sbjct: 479 FMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPI 538
Query: 959 PGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQ 780
PGE WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI+
Sbjct: 539 PGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIK 598
Query: 779 GIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 600
IR AYT+DFT+KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +P
Sbjct: 599 NIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIP 658
Query: 599 PNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELM 420
PN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGK DD+FDKLDTSKLNAHLKELM
Sbjct: 659 PNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELM 718
Query: 419 PGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRTVSKSHSA 240
PGLTAKVFRTYNASITLD+MLN+ETK G+VAEK+VVYQ ANKEVAIICNHQR++SKSHSA
Sbjct: 719 PGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRSISKSHSA 778
Query: 239 QMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKVKRNLNPESLEKKISQTTAKI 60
QM+RL EKI ELK VL+EL+ DL RAKKGKPPLK +DGK KRNL P++++KKI QT AKI
Sbjct: 779 QMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKIDQTNAKI 838
Query: 59 EKMERDKETKEDLKTVALG 3
EKMERD +TKEDLKTVALG
Sbjct: 839 EKMERDMQTKEDLKTVALG 857
>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 960 bits (2481), Expect = 0.0
Identities = 531/858 (61%), Positives = 605/858 (70%), Gaps = 25/858 (2%)
Frame = -3
Query: 2501 MAVEACDKQK---EMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPAL 2331
MAVEA K K E+DD DD+D P+VFKR S QK D + GR A
Sbjct: 1 MAVEAFSKTKLMAEVDD-DDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQAS 54
Query: 2330 NARPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTG 2151
+ R NGQ++S +K K G SS+ SP SPK S S R S P+S PS S
Sbjct: 55 DVRSPNGQSSSAEKVKAGTSSKASRAVSPFTSPKASPSSGR----TSPAPNSRPSASAGN 110
Query: 2150 ELNSVKRQ---IAGE-NSLNKSTSGPXXXXXXXXXDKPLSARFS----KLNSGNGSKGAD 1995
+ V +Q + E + S P DKPLSAR S K NS + +K
Sbjct: 111 QAKDVNQQSKIVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLG 170
Query: 1994 ALNSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASG 1842
S Q S+ PK EDSDD++P A E KP + QNG S
Sbjct: 171 TSASVQKSRPPKKEDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKP---KIRQNGLPS- 226
Query: 1841 ERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSIL-----HKNKESSTKAEIKEEDDEDH 1677
+TVL KR P D S R +L L + E+S K E K EDD+D
Sbjct: 227 ----TTVLSKR-----PPGDVSLLLRLQLKSLGFLMHLHLFRVSEASVKPEKKTEDDDDD 277
Query: 1676 VPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEG 1497
VPISQR+KK+V K + KK TK + + K +K LK SKYS+SSK+ PSSGEG
Sbjct: 278 VPISQRIKKSVASASKLSSAKKATKVVSS-----SMKTKKKLKKSKYSKSSKLQPSSGEG 332
Query: 1496 QKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKE 1317
QKWTTLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AVMLDT+YM K +FKE
Sbjct: 333 QKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTDYMSKLQFKE 392
Query: 1316 NFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKY 1137
NFM+DWRKILGKNH+IQ+L+ CDFTPIYE KY
Sbjct: 393 NFMNDWRKILGKNHVIQNLDDCDFTPIYERPSSEKEKKKQMSTKRKRPLREEKLKQEEKY 452
Query: 1136 MWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIP 957
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITINIG+ APIPECPIP
Sbjct: 453 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGAPIPECPIP 512
Query: 956 GESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQG 777
GE WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+G
Sbjct: 513 GERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEG 572
Query: 776 IRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP 597
IR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP
Sbjct: 573 IRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP 632
Query: 596 NILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMP 417
NILKFDFLGKDSIRYQNEV V VF+AIQ FR+GKKGGDD+FDKLDTSKLNAHLKELMP
Sbjct: 633 NILKFDFLGKDSIRYQNEVAVYKPVFKAIQLFRSGKKGGDDLFDKLDTSKLNAHLKELMP 692
Query: 416 GLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRTVSKSHSAQ 237
GLTAKVFRTYNAS+TL+ L + T+GGE+AEK+ VY ANKEVAIICNHQR+VSKSHS Q
Sbjct: 693 GLTAKVFRTYNASVTLEQQLTKLTQGGELAEKVAVYNLANKEVAIICNHQRSVSKSHSVQ 752
Query: 236 MTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKVKRNLNPESLEKKISQTTAKIE 57
+++LNEKIDELK++LEE + DLARAKKGKPPLK +DGK KRNL PE+L+KKI QT KIE
Sbjct: 753 ISKLNEKIDELKALLEEFKVDLARAKKGKPPLKGADGKAKRNLAPEALQKKIDQTNVKIE 812
Query: 56 KMERDKETKEDLKTVALG 3
+E+ ETKE+LKTVALG
Sbjct: 813 NIEKQIETKEELKTVALG 830
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 952 bits (2461), Expect = 0.0
Identities = 523/876 (59%), Positives = 600/876 (68%), Gaps = 43/876 (4%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNA 2325
MAVEA K M+D+DD+D P+VFKR S QK D + GR +
Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQVPDV 55
Query: 2324 RPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKL--------------------SNSPTRG 2205
R NGQ++S K K SS+ P SPL SPK S +P
Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAP 115
Query: 2204 LAVKSAMPDSIPSTSMTGELNSVKRQ--IAGENSLN--KSTSGPXXXXXXXXXDKPLSAR 2037
+ S P+S PS+S + +V +Q IA + S + S P DKPLSAR
Sbjct: 116 NSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSAR 175
Query: 2036 ----FSKLNSGNGSKGADALNSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA-------- 1893
SK NS + + S Q S+ PK EDSDD++P A
Sbjct: 176 VPSGLSKSNSIHANNVLGTSTSVQKSRPPKKEDSDDEIPLASRFQMKSSAGASTSKFSSS 235
Query: 1892 -EKKPLWAECGQNGSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSIL-HKN--- 1728
E KP + QNG S +TVL KR P + S R +L L H +
Sbjct: 236 EEVKP---KIRQNGLPS-----ATVLSKR-----PPGEVSLLLRLQLKSLDFLMHLHLFL 282
Query: 1727 -KESSTKAEIKEEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVL 1551
S K E K EDD+D VP+SQR+KK V SA K + KK +K L
Sbjct: 283 VSNXSVKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKL 342
Query: 1550 KNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVAT 1371
K KYS+SSK+ PSSG+GQKWTTL HNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVAT
Sbjct: 343 KKPKYSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVAT 402
Query: 1370 MFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXX 1191
M+AVMLDTEY+ K +FKENFM+DWRKILGKNH+IQ LE C+FTPIYEWH
Sbjct: 403 MYAVMLDTEYLTKQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMS 462
Query: 1190 XXXXXXXXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1011
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+
Sbjct: 463 SEEKKALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPN 522
Query: 1010 DITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQ 831
DITINIG+ P+PECPIPG+ WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSLKGQ
Sbjct: 523 DITINIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQ 582
Query: 830 SDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEA 651
SDKEKYEKAR LKDYI+GIR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 583 SDKEKYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEA 642
Query: 650 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDM 471
DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV V VF+AIQQFR+GKKGGDD+
Sbjct: 643 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDL 702
Query: 470 FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKE 291
FDKLDTSKLNAHLKELMPGLTAKVFRTYNAS TL+ L + T+GGE+A+K+ VY ANKE
Sbjct: 703 FDKLDTSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLTQGGELADKVAVYNVANKE 762
Query: 290 VAIICNHQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPLKSSDGKVKRN 111
VAIICNHQRTVSKSHS Q++RLNEKIDELK++LEE + DLARAKKGKPP+K +DGK KRN
Sbjct: 763 VAIICNHQRTVSKSHSVQISRLNEKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRN 822
Query: 110 LNPESLEKKISQTTAKIEKMERDKETKEDLKTVALG 3
L PE+L+KKI QT KI+ +ER ETKE+LKTVALG
Sbjct: 823 LTPEALQKKIDQTNVKIDNIERQIETKEELKTVALG 858
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 944 bits (2441), Expect = 0.0
Identities = 523/871 (60%), Positives = 613/871 (70%), Gaps = 38/871 (4%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDD-EDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNA 2325
MAVEA K + D DD ED P VFKR NPE K+ ++
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRP--------------SS 46
Query: 2324 RPQNGQNNSFQKSKMG-PSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPS------ 2166
NGQN++ K K SS+ P +SP S K + S + +KS M + S
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPV 106
Query: 2165 ------TSMTGELNSVKRQIAGENSLN-------KSTSGPXXXXXXXXXDKPLSARFS-- 2031
+ + L+ +Q+ N+L K +G DKPLSAR
Sbjct: 107 KSPVANSKESSPLDDRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGN 166
Query: 2030 --KLNSGNGSKGADALNSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA--------EKKP 1881
+N G G+ ADA S N K EDSDD+VP ++ EKKP
Sbjct: 167 TKNVNQGIGASKADAAISEVNVKTDP-EDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKP 225
Query: 1880 LWAECGQNGSASGE--RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKA 1707
L ++ QNGS S E +K S+V KR + + ASS+K+PK+S+TS K K+ + K
Sbjct: 226 LASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKV 285
Query: 1706 EIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKYSE 1530
E K+ DD+DH+PISQRMK + KKS K TK + +KK NKK +KV+KNS+YS+
Sbjct: 286 E-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSK 344
Query: 1529 SSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVML 1353
S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYKGK V LTPEQEEVATMFAVML
Sbjct: 345 STKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVML 404
Query: 1352 DTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXX 1173
DT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PIY+WH
Sbjct: 405 DTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKA 464
Query: 1172 XXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 993
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINI
Sbjct: 465 LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINI 524
Query: 992 GRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKY 813
G+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSD+EKY
Sbjct: 525 GKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKY 584
Query: 812 EKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 633
EKAR LKDYI IR AYT+DF S+D T++QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585 EKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644
Query: 632 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDT 453
TLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGKK DD+FDKLDT
Sbjct: 645 TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 704
Query: 452 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICN 273
+KLNAHLKELMPGLTAKVFRTYNASITLD MLN+ T G+VA KI VYQ ANKEVAIICN
Sbjct: 705 AKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICN 764
Query: 272 HQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPL-KSSDGKVKRNLNPES 96
HQRTVSK+HSAQM+RL EKI++LK VL++LR DL RAKKGKPPL K SDGK KRNL PE+
Sbjct: 765 HQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824
Query: 95 LEKKISQTTAKIEKMERDKETKEDLKTVALG 3
LE+K++QT AKIEKMERD +TKEDLKTVALG
Sbjct: 825 LERKMAQTNAKIEKMERDMKTKEDLKTVALG 855
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 941 bits (2432), Expect = 0.0
Identities = 523/871 (60%), Positives = 610/871 (70%), Gaps = 38/871 (4%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDD-EDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNA 2325
MAVEA K + D DD ED P VFKR NPE K+ ++
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRP--------------SS 46
Query: 2324 RPQNGQNNSFQKSKMG-PSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPS------ 2166
NGQN++ K K SS+ P +SP S K + S + KS M + S
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASPSKSPMRSPVKSPVRSPV 106
Query: 2165 ------TSMTGELNSVKRQIAGENSLN-------KSTSGPXXXXXXXXXDKPLSARFS-- 2031
+ + L+ +Q N+L K +G DKPLSAR
Sbjct: 107 KSPVANSKESSPLDDRLKQSPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKGN 166
Query: 2030 --KLNSGNGSKGADALNSGQNSKIPKSEDSDDKVPXXXXXXXXXXXSA--------EKKP 1881
+N G G+ ADA S N K EDSDD+VP ++ EKKP
Sbjct: 167 SKNVNQGIGASKADAAISEVNVKTDP-EDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKP 225
Query: 1880 LWAECGQNGSASGE--RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKA 1707
L ++ QNGS S E +K S+V KR + + ASS+K+PK+S+TS K K+ + K
Sbjct: 226 LASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKV 285
Query: 1706 EIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKYSE 1530
E K+ DD+DH+PISQRMK + KKS K TK + + K NKK +KV+KNS+YS+
Sbjct: 286 E-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSK 344
Query: 1529 SSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVML 1353
S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYKGK V LTPEQEEVATMFAVML
Sbjct: 345 STKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVML 404
Query: 1352 DTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXX 1173
DT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PIY+WH
Sbjct: 405 DTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKA 464
Query: 1172 XXXXXXXXXXKYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 993
KYMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINI
Sbjct: 465 LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINI 524
Query: 992 GRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKY 813
G+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSDKEKY
Sbjct: 525 GKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 584
Query: 812 EKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 633
EKAR LKDYI IR AYT+DF S+D T++QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585 EKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644
Query: 632 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDT 453
TLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGKK DD+FDKLDT
Sbjct: 645 TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 704
Query: 452 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICN 273
+KLNAHLKELMPGLTAKVFRTYNASITLD MLN+ T G+VA KI VYQ ANKEVAIICN
Sbjct: 705 AKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICN 764
Query: 272 HQRTVSKSHSAQMTRLNEKIDELKSVLEELRTDLARAKKGKPPL-KSSDGKVKRNLNPES 96
HQRTVSK+HSAQM+RL EKI++LK VL++LR DL RAKKGKPPL K SDGK KRNL PE+
Sbjct: 765 HQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824
Query: 95 LEKKISQTTAKIEKMERDKETKEDLKTVALG 3
LE+K++QT AKIEKMERD +TKEDLKTVALG
Sbjct: 825 LERKMAQTNAKIEKMERDMKTKEDLKTVALG 855
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 938 bits (2425), Expect = 0.0
Identities = 516/851 (60%), Positives = 613/851 (72%), Gaps = 18/851 (2%)
Frame = -3
Query: 2501 MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXNPETKKSLPQKHDQQLGRPALNAR 2322
MAVE K DD D+++ P+VFKR + E K S Q+ + GR +
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDS-EIKHSQAQRLSKLPGRQGSDLC 59
Query: 2321 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLS-NSPTRGLAVKSAMPDSIPSTSMTGEL 2145
NGQ+++ QK +M +T P RS + S K S +SP KS S SM
Sbjct: 60 STNGQSSNNQK-RMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRP 118
Query: 2144 NSVKRQIAGENSLNKSTSGPXXXXXXXXXDKPLSARFSKLNSGNGSKGADALNSGQNSKI 1965
S+ + E +++ + P DKPLS R K N +KG +++ +K+
Sbjct: 119 KSLVNAVVKEENVSIN---PSQENSDSEDDKPLSIRL-KGNPNQPNKGL--VSTVPKNKV 172
Query: 1964 PKS-EDSDDKVPXXXXXXXXXXXSA---------EKKPLWAECGQNGSASGER--KPSTV 1821
KS DSDD+VP EKKPL + QNGS S ++ KP+ +
Sbjct: 173 KKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVL 232
Query: 1820 LKKR---NVDDVKPTDASSSKRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKK 1650
KR N D P+ + K+PKL+++S +K S KA+ + +DD+D +PISQRMKK
Sbjct: 233 SSKRPLPNEDSHSPSQFPT-KKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKK 291
Query: 1649 -TVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQK-WTTLV 1476
+ + K S+ ++K + KK KK +K +K SKY +S+K+ PS+G+GQK WTTLV
Sbjct: 292 VSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLV 351
Query: 1475 HNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWR 1296
HNGVIFPPPY+ HGVK+LYKGKPV LTP QEEVATMFAVM DT+YM KPKFKENF +DWR
Sbjct: 352 HNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWR 411
Query: 1295 KILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAVLDG 1116
K+LGKNH+IQ+L+ CDFTPIY+W+ KYMWA+LDG
Sbjct: 412 KLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDG 471
Query: 1115 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEI 936
VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIG+ APIPECPIPGE WKE+
Sbjct: 472 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEV 531
Query: 935 RHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTR 756
RHDNTVTWLA+WNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI+ IR AYT+
Sbjct: 532 RHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTK 591
Query: 755 DFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDF 576
DFTSKDPT++QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ VPPN+L+F+F
Sbjct: 592 DFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNF 651
Query: 575 LGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVF 396
LGKDSIRY+N VEVE+ VF+AI QF++GK G DD+FDKLDTSKLNAHLK+LMPGLTAKVF
Sbjct: 652 LGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVF 711
Query: 395 RTYNASITLDDMLNRETKGGEVAEKIVVYQHANKEVAIICNHQRTVSKSHSAQMTRLNEK 216
RTYNASITLDDMLNR TK GEV+EKIV YQHANKEVAIICNHQRTVSKSH AQMTRLNEK
Sbjct: 712 RTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEK 771
Query: 215 IDELKSVLEELRTDLARAKKGKPPLKSSDGKVKRNLNPESLEKKISQTTAKIEKMERDKE 36
I EL+ +L+EL+ DL RAKKGKPPLK SDGK KRNL PE+LEKKISQT AKIEK+ERD +
Sbjct: 772 ISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMK 831
Query: 35 TKEDLKTVALG 3
TKEDLKTVALG
Sbjct: 832 TKEDLKTVALG 842