BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00011516
         (1912 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU23711.1| hypothetical protein MIMGU_mgv1a001275mg [Mimulus...   627   e-177
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   572   e-160
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              572   e-160
ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containi...   565   e-158
ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containi...   562   e-157
ref|XP_007034933.1| Tetratricopeptide repeat (TPR)-like superfam...   547   e-153
ref|XP_006420082.1| hypothetical protein CICLE_v10004292mg [Citr...   544   e-152
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   541   e-151
ref|XP_006489493.1| PREDICTED: pentatricopeptide repeat-containi...   540   e-150
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   526   e-146
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...   526   e-146
ref|XP_007227046.1| hypothetical protein PRUPE_ppa001385mg [Prun...   525   e-146
gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis]     517   e-144
ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containi...   507   e-141
ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Popu...   501   e-139
ref|NP_188942.1| pentatricopeptide repeat-containing protein [Ar...   497   e-138
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   496   e-137
ref|XP_006300104.1| hypothetical protein CARUB_v10016333mg [Caps...   491   e-136
ref|XP_002863007.1| pentatricopeptide repeat-containing protein ...   486   e-134
ref|XP_007148598.1| hypothetical protein PHAVU_006G222000g [Phas...   483   e-133

>gb|EYU23711.1| hypothetical protein MIMGU_mgv1a001275mg [Mimulus guttatus]
          Length = 848

 Score =  627 bits (1617), Expect = e-177
 Identities = 306/406 (75%), Positives = 357/406 (87%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDE+ +EIDEFTQSSLTRMYIEAGL+++SW WF RFH  G M+SECYSA IDA+GERG+
Sbjct: 429  EMDEKGLEIDEFTQSSLTRMYIEAGLVEKSWAWFQRFHLGGNMTSECYSATIDAFGERGH 488

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AEK F CC++V KL+VLEFNVMIK+YGISKKF+ AC LFDSM++HGL+ D+CGYNSL
Sbjct: 489  ILQAEKVFECCLQVKKLSVLEFNVMIKSYGISKKFDRACHLFDSMEKHGLVSDRCGYNSL 548

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQMLASADLPE AI YLR+M+E  L+IDCVPYCAVISSYAKLGR+EMAVE+Y EMI   +
Sbjct: 549  VQMLASADLPEKAIFYLRKMRELDLVIDCVPYCAVISSYAKLGRMEMAVEVYKEMIGCGI 608

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            KPDVIVYGVLINA+AETGNV EATYY+ TMRNLGL MN VV KSLIKLYTKVG+LKEA+E
Sbjct: 609  KPDVIVYGVLINAYAETGNVYEATYYIETMRNLGLPMNGVVCKSLIKLYTKVGYLKEAQE 668

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
            + + LQ  ETG+DVYSSNCMIDLYSERSMV+EAEEIFE LK+NG+ANEFT+AMML MYKR
Sbjct: 669  SYKNLQLFETGIDVYSSNCMIDLYSERSMVSEAEEIFENLKRNGDANEFTYAMMLCMYKR 728

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N R VEAFWIA++MRELGLMT+LL+YN VLG YASDGRYK+AVATF EM+ SLV PD+ T
Sbjct: 729  NGRFVEAFWIARKMRELGLMTDLLSYNHVLGLYASDGRYKEAVATFEEMVKSLVRPDNST 788

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLGI+LLKCGVPK A+++LE  RKKD  SG++ W + L+SVV+M
Sbjct: 789  FKSLGIILLKCGVPKVAIDRLETERKKDQESGVRAWASILTSVVDM 834



 Score =  110 bits (275), Expect = 2e-21
 Identities = 103/391 (26%), Positives = 172/391 (43%), Gaps = 35/391 (8%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHRE------GR------------- 128
            M+ER ME DE T   + +MY +AG    +  +F ++         GR             
Sbjct: 226  MNEREMEPDEVTMGIVVQMYKKAGDFKTAEEFFKKWSSRNSAVVVGRGGTSSRSRSKTGV 285

Query: 129  -----------MSSECYSANIDAYGERGYVLLAEKAFYCCV-KVLKLTVLEFNVMIKAYG 272
                       +S+  Y+  ID YG+ G +  A + F   + K +    + FN MI  YG
Sbjct: 286  NGDSSSASNVCLSNYTYNTMIDTYGKAGKLKEASETFERMLQKGVVPNTVTFNTMIHMYG 345

Query: 273  ISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCV 452
             + +  +   L + M+     PD   YN L+ + A  D  E A  YL++M+E+ L  D V
Sbjct: 346  NNGQLAKVASLMEKMEGAKCSPDTRTYNILISLHAKHDDIELAARYLKKMKESSLEPDAV 405

Query: 453  PYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTM 632
             Y  ++ +++    V  A EL  EM    ++ D      L   + E G V+++  + +  
Sbjct: 406  SYRTLLYAFSIRCMVSEAEELIAEMDEKGLEIDEFTQSSLTRMYIEAGLVEKSWAWFQRF 465

Query: 633  RNLGLLMNSVVLKSLIKLYTKVGHLKEAE---EACRMLQSLETGLDVYSSNCMIDLYSER 803
             +LG  M S    + I  + + GH+ +AE   E C  ++     L V   N MI  Y   
Sbjct: 466  -HLGGNMTSECYSATIDAFGERGHILQAEKVFECCLQVKK----LSVLEFNVMIKSYGIS 520

Query: 804  SMVAEAEEIFERLKKNGEANEFTHAMMLSMYKRNWRLVE-AFWIAKRMRELGLMTELLTY 980
                 A  +F+ ++K+G  ++      L     +  L E A +  ++MREL L+ + + Y
Sbjct: 521  KKFDRACHLFDSMEKHGLVSDRCGYNSLVQMLASADLPEKAIFYLRKMRELDLVIDCVPY 580

Query: 981  NLVLGFYASDGRYKDAVATFREMLDSLVSPD 1073
              V+  YA  GR + AV  ++EM+   + PD
Sbjct: 581  CAVISSYAKLGRMEMAVEVYKEMIGCGIKPD 611



 Score = 79.0 bits (193), Expect = 7e-12
 Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
 Frame = +3

Query: 513  LYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYT 692
            L+ EM    +KP    YG LI+ + + G+ D+A  ++  M    +  + V +  ++++Y 
Sbjct: 187  LWGEMEKKRIKPINSTYGTLIDVYCKGGHRDKAMKWLELMNEREMEPDEVTMGIVVQMYK 246

Query: 693  KVGHLKEAEEACRMLQSLETGLDV-----------------------------YSSNCMI 785
            K G  K AEE  +   S  + + V                             Y+ N MI
Sbjct: 247  KAGDFKTAEEFFKKWSSRNSAVVVGRGGTSSRSRSKTGVNGDSSSASNVCLSNYTYNTMI 306

Query: 786  DLYSERSMVAEAEEIFERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLM 962
            D Y +   + EA E FER+ + G   N  T   M+ MY  N +L +   + ++M      
Sbjct: 307  DTYGKAGKLKEASETFERMLQKGVVPNTVTFNTMIHMYGNNGQLAKVASLMEKMEGAKCS 366

Query: 963  TELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVL-LKCGVPKSAVE 1139
             +  TYN+++  +A     + A    ++M +S + PD  ++++L     ++C V ++   
Sbjct: 367  PDTRTYNILISLHAKHDDIELAARYLKKMKESSLEPDAVSYRTLLYAFSIRCMVSEAEEL 426

Query: 1140 KLEKTRKKDMVSGLQMWTATLSSVVNM 1220
              E   K     GL++   T SS+  M
Sbjct: 427  IAEMDEK-----GLEIDEFTQSSLTRM 448


>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
            [Vitis vinifera]
          Length = 881

 Score =  572 bits (1475), Expect = e-160
 Identities = 279/406 (68%), Positives = 338/406 (83%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFTQS+LTRMYIEAG++ +SWLWF RFH EG MSSECYSANIDAYGERG+
Sbjct: 455  EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGH 514

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AEKAF CC +  KL+VLEFNVMIKAYGIS ++E+AC L DSM+ HG++PDK  YNSL
Sbjct: 515  ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSL 574

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LASADLP  A  YL +MQE  L+ DC+PYCAVISS+ KLG++EMA  L+ EMI ++V
Sbjct: 575  IQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNV 634

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYG+LINAFA+ GNV EA  YV  +RN GL MN+V+  SLIKLYTKVG+L+EA+E
Sbjct: 635  QPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQE 694

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
            A +MLQ+ E G DVYSSNCMIDLYSERSMV +AEEIFE LK+ G+ANEF+ AMML MYKR
Sbjct: 695  AYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKR 754

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              +L EAF I ++MRELGL+T+LL+YN VLGFYA DGR+KDAV TF+EM+++ + PDDCT
Sbjct: 755  IGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCT 814

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLG+VL+KCG+PK AV KLE TRKKD  SGLQ W + L SVV +
Sbjct: 815  FKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVEV 860



 Score =  107 bits (266), Expect = 2e-20
 Identities = 106/435 (24%), Positives = 181/435 (41%), Gaps = 28/435 (6%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSEC-YSANIDAYGERG 179
            EM  R +     T  +L  +Y + GL +E+  W  R +++G    E      +  Y + G
Sbjct: 221  EMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAG 280

Query: 180  YVLLAEKAF--YCCVKVLK-----------------------LTVLEFNVMIKAYGISKK 284
                AE+ F  +   K LK                       L+   +N +I  YG + +
Sbjct: 281  EFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQ 340

Query: 285  FEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCA 464
              EA   F  M + G+IP+   +N+++ +  +    E A   +++M+E     D   Y  
Sbjct: 341  LREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNI 400

Query: 465  VISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLG 644
            +IS +AK   ++ A   + +M    ++PD++ Y  L+ AF+    V EA   V  M   G
Sbjct: 401  LISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG 460

Query: 645  LLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGL--DVYSSNCMIDLYSERSMVAE 818
            L ++     +L ++Y + G LK++    R    LE  +  + YS+N  ID Y ER  + E
Sbjct: 461  LEIDEFTQSALTRMYIEAGMLKKSWLWFRRFH-LEGNMSSECYSAN--IDAYGERGHILE 517

Query: 819  AEEIFERLKKNGEANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGF 998
            AE                               +AF   K  R+L     +L +N+++  
Sbjct: 518  AE-------------------------------KAFLCCKESRKL----SVLEFNVMIKA 542

Query: 999  YASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSG 1178
            Y    RY+ A      M +  V PD  ++ SL  +L    +P  A   L K ++  +VS 
Sbjct: 543  YGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSD 602

Query: 1179 LQMWTATLSSVVNMG 1223
               + A +SS + +G
Sbjct: 603  CIPYCAVISSFIKLG 617



 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            ++ + Y  ++    K  +      L++EM+S  + P    YG LI+ +++ G  +EA ++
Sbjct: 194  LNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHW 253

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE------------------------AC 728
            +  M   G+  + V +  +++ Y K G  K+AE+                        A 
Sbjct: 254  LDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAV 313

Query: 729  RMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEA-NEFTHAMMLSMYKRN 905
                     L  Y+ N +ID Y +   + EA + F  + + G   N  T   M+ +   +
Sbjct: 314  ESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNH 373

Query: 906  WRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTF 1085
             +L EA  + ++M EL    +  TYN+++  +A       A + F++M ++ + PD  ++
Sbjct: 374  GQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSY 433

Query: 1086 KSL 1094
            ++L
Sbjct: 434  RTL 436


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  572 bits (1475), Expect = e-160
 Identities = 279/406 (68%), Positives = 338/406 (83%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFTQS+LTRMYIEAG++ +SWLWF RFH EG MSSECYSANIDAYGERG+
Sbjct: 436  EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGH 495

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AEKAF CC +  KL+VLEFNVMIKAYGIS ++E+AC L DSM+ HG++PDK  YNSL
Sbjct: 496  ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSL 555

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LASADLP  A  YL +MQE  L+ DC+PYCAVISS+ KLG++EMA  L+ EMI ++V
Sbjct: 556  IQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNV 615

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYG+LINAFA+ GNV EA  YV  +RN GL MN+V+  SLIKLYTKVG+L+EA+E
Sbjct: 616  QPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQE 675

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
            A +MLQ+ E G DVYSSNCMIDLYSERSMV +AEEIFE LK+ G+ANEF+ AMML MYKR
Sbjct: 676  AYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKR 735

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              +L EAF I ++MRELGL+T+LL+YN VLGFYA DGR+KDAV TF+EM+++ + PDDCT
Sbjct: 736  IGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCT 795

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLG+VL+KCG+PK AV KLE TRKKD  SGLQ W + L SVV +
Sbjct: 796  FKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVEV 841



 Score =  110 bits (274), Expect = 3e-21
 Identities = 103/416 (24%), Positives = 178/416 (42%), Gaps = 9/416 (2%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSEC-YSANIDAYGERG 179
            EM  R +     T  +L  +Y + GL +E+  W  R +++G    E      +  Y + G
Sbjct: 221  EMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAG 280

Query: 180  YVLLAEKAFY------CCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPD 341
                AE+ F            + L+   +N +I  YG + +  EA   F  M + G+IP+
Sbjct: 281  EFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPN 340

Query: 342  KCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYN 521
               +N+++ +  +    E A   +++M+E     D   Y  +IS +AK   ++ A   + 
Sbjct: 341  TVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFK 400

Query: 522  EMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVG 701
            +M    ++PD++ Y  L+ AF+    V EA   V  M   GL ++     +L ++Y + G
Sbjct: 401  KMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAG 460

Query: 702  HLKEAEEACRMLQSLETGL--DVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTH 875
             LK++    R    LE  +  + YS+N  ID Y ER  + EAE                 
Sbjct: 461  MLKKSWLWFRRFH-LEGNMSSECYSAN--IDAYGERGHILEAE----------------- 500

Query: 876  AMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLD 1055
                          +AF   K  R+L     +L +N+++  Y    RY+ A      M +
Sbjct: 501  --------------KAFLCCKESRKL----SVLEFNVMIKAYGISNRYEKACQLIDSMEN 542

Query: 1056 SLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
              V PD  ++ SL  +L    +P  A   L K ++  +VS    + A +SS + +G
Sbjct: 543  HGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLG 598



 Score =  103 bits (256), Expect = 4e-19
 Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 9/414 (2%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGR------MSSECYSANIDAY 167
            M+++ ME DE T   + + Y +AG   ++  +F  +  E        +SS  Y+  ID Y
Sbjct: 257  MNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTY 316

Query: 168  GERGYVLLAEKAFYCCVK--VLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPD 341
            G+ G +  A   F   ++  ++  TV  FN MI   G   + EEA  L   M++    PD
Sbjct: 317  GKAGQLREASDTFAWMLREGIIPNTVT-FNTMIHICGNHGQLEEAASLMQKMEELRCPPD 375

Query: 342  KCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYN 521
               YN L+ + A  +  + A  Y ++M+EA L  D V Y  ++ +++    V  A  L +
Sbjct: 376  TRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVS 435

Query: 522  EMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVG 701
            EM    ++ D      L   + E G + ++  + R     G  M+S    + I  Y + G
Sbjct: 436  EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGN-MSSECYSANIDAYGERG 494

Query: 702  HLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEA-NEFTHA 878
            H+ EAE+A    +     L V   N MI  Y   +   +A ++ + ++ +G   ++F++ 
Sbjct: 495  HILEAEKAFLCCKESRK-LSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYN 553

Query: 879  MMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDS 1058
             ++ +        +A +   +M+E  L+++ + Y  V+  +   G+ + A   F+EM+  
Sbjct: 554  SLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGY 613

Query: 1059 LVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
             V PD   +  L       G  + AV  +   R     +GL M     +S++ +
Sbjct: 614  NVQPDVVVYGILINAFADVGNVREAVNYVNALRN----AGLPMNAVIYNSLIKL 663


>ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Solanum tuberosum]
          Length = 959

 Score =  565 bits (1455), Expect = e-158
 Identities = 274/406 (67%), Positives = 337/406 (83%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD++ ++IDEFTQS+LTRMY+EAG+++ SW WF RFH  G+MSSECYSANIDAYGERG+
Sbjct: 543  EMDKKDLQIDEFTQSALTRMYLEAGMVEMSWSWFQRFHLAGKMSSECYSANIDAYGERGH 602

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+AF CC +  +LTVLEFNVMIKAYGISKK+ EAC+LFDSM++HGL PDKC Y+SL
Sbjct: 603  ISEAERAFNCCSEGKRLTVLEFNVMIKAYGISKKYNEACYLFDSMEKHGLSPDKCSYSSL 662

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +QMLA ADLP  A  Y+R M+EAGL+ DC+PYCAVISS+ K+G++EMAV L++EMI   +
Sbjct: 663  IQMLAGADLPLKAASYVREMKEAGLVDDCIPYCAVISSFVKVGQLEMAVSLFDEMIVFGI 722

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            KPDV+VYGVLINAFA+ G+V +AT Y+  MRN GL  N+V+  SLIKLYTKVG+L+EA+E
Sbjct: 723  KPDVVVYGVLINAFADMGSVKDATKYLVEMRNSGLEANAVIYTSLIKLYTKVGYLREAQE 782

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              +MLQS E GLDVYSSNCMIDLYSERSMV +AEEIFE LKK G ANEF++AMML MY+R
Sbjct: 783  TYKMLQSFEEGLDVYSSNCMIDLYSERSMVKQAEEIFEHLKKKGNANEFSYAMMLCMYRR 842

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N    EA   A++M+ELGL+T+LL+YN VLG  ASDGRYK+A+AT++EML S + PDD T
Sbjct: 843  NGMFKEAIQNARKMKELGLLTDLLSYNNVLGLCASDGRYKEALATYKEMLSSAIQPDDST 902

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLGIVLLKCGVPK A+ KLE  RKKD  SG+Q WT+ LSSV+ +
Sbjct: 903  FKSLGIVLLKCGVPKEAISKLESMRKKDPQSGVQEWTSALSSVIGV 948



 Score =  113 bits (282), Expect = 3e-22
 Identities = 113/433 (26%), Positives = 187/433 (43%), Gaps = 27/433 (6%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLID--ESWL--WFL-RFHREGR-------------- 128
            M+ER M  DE T   + +MY  AG     E +L  W L +   E R              
Sbjct: 345  MNERGMVPDEVTMGIVVQMYKMAGEFKKAEEFLKKWSLCKCQVEERVNGGPRSGIRVNGS 404

Query: 129  ------MSSECYSANIDAYGERGYVLLAEKAFYCCVKVLKL-TVLEFNVMIKAYGISKKF 287
                  +SS  Y+  ID YG+ G V  A + F+  ++   L T + FN MI   G + + 
Sbjct: 405  SGSSVCLSSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNNGRM 464

Query: 288  EEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAV 467
            EE   L   M+     PD   YN L+ + A  D  E A  Y + M++A L  D V Y  +
Sbjct: 465  EEVASLMRKMEGLQCHPDTRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTYRTL 524

Query: 468  ISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGL 647
            + +++    V  A +L  EM   D++ D      L   + E G V+ +  + +     G 
Sbjct: 525  LYAFSIRNMVSEAEKLILEMDKKDLQIDEFTQSALTRMYLEAGMVEMSWSWFQRFHLAG- 583

Query: 648  LMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEE 827
             M+S    + I  Y + GH+ EAE A     S    L V   N MI  Y       EA  
Sbjct: 584  KMSSECYSANIDAYGERGHISEAERAFNCC-SEGKRLTVLEFNVMIKAYGISKKYNEACY 642

Query: 828  IFERLKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYA 1004
            +F+ ++K+G   ++ +++ ++ M       ++A    + M+E GL+ + + Y  V+  + 
Sbjct: 643  LFDSMEKHGLSPDKCSYSSLIQMLAGADLPLKAASYVREMKEAGLVDDCIPYCAVISSFV 702

Query: 1005 SDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQ 1184
              G+ + AV+ F EM+   + PD   +  L       G  K A + L + R   + +   
Sbjct: 703  KVGQLEMAVSLFDEMIVFGIKPDVVVYGVLINAFADMGSVKDATKYLVEMRNSGLEANAV 762

Query: 1185 MWTATLSSVVNMG 1223
            ++T+ +     +G
Sbjct: 763  IYTSLIKLYTKVG 775


>ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Solanum lycopersicum]
          Length = 966

 Score =  562 bits (1448), Expect = e-157
 Identities = 272/406 (66%), Positives = 337/406 (83%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD++ ++IDEFTQS+LTRMY+EAG+++ SW WF RFH  G+MSSECYSANIDA+GERG+
Sbjct: 550  EMDKKDLQIDEFTQSALTRMYLEAGMVEMSWSWFQRFHFGGKMSSECYSANIDAFGERGH 609

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+AF CC +  +LTVLEFNVMIKAYGISKK+ EAC+LFDSM++HGL PDKC Y+SL
Sbjct: 610  ISEAERAFNCCSEGKRLTVLEFNVMIKAYGISKKYNEACYLFDSMEKHGLSPDKCSYSSL 669

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +QMLA ADLP  A  Y+R MQEAGL+ DC+PYCAVISS+ K+G++EMAV L++EMI   +
Sbjct: 670  IQMLAGADLPLKAASYVREMQEAGLVNDCIPYCAVISSFVKVGQLEMAVSLFDEMIVFGI 729

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            KPDV++YGVLINAFA+ G+V +AT Y+  MRN GL  N+V+  SLIKLYTKVG+L+EA+E
Sbjct: 730  KPDVVLYGVLINAFADMGSVKDATKYLVEMRNSGLEANAVIYTSLIKLYTKVGYLREAQE 789

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              +MLQS E GLDVYSSNCMIDLYSERSMV +AEEIFE LKK G ANEF++AMML MY+R
Sbjct: 790  TYKMLQSFEAGLDVYSSNCMIDLYSERSMVKQAEEIFEHLKKKGNANEFSYAMMLCMYRR 849

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N    EA   A++M+ELGL+T+LL+YN VLG  A+DGRYK+A+AT++EML S + PDD T
Sbjct: 850  NGMFKEAIQNARKMKELGLLTDLLSYNNVLGLCATDGRYKEALATYKEMLSSAIQPDDST 909

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLGIVLLKCGVPK A+ KLE  RKKD  SG+Q WT+ LSSV+ +
Sbjct: 910  FKSLGIVLLKCGVPKEAINKLESMRKKDPQSGVQEWTSALSSVIGV 955



 Score =  114 bits (286), Expect = 1e-22
 Identities = 112/433 (25%), Positives = 189/433 (43%), Gaps = 27/433 (6%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLID--ESWL--WFL-RFHREGR-------------- 128
            M+ER M  DE T   + +MY  AG     E +L  W L +F  E R              
Sbjct: 352  MNERGMVPDEVTMGIVVQMYKMAGEFKKAEEFLKKWSLCKFQVEERVNGGPRSGIRVNGS 411

Query: 129  ------MSSECYSANIDAYGERGYVLLAEKAFYCCVKVLKL-TVLEFNVMIKAYGISKKF 287
                  +SS  Y+  ID YG+ G V  A + F+  ++   L T + FN MI   G + + 
Sbjct: 412  SGSSVCLSSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNNGRM 471

Query: 288  EEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAV 467
            EE   L   M+     PD   YN L+ + A  D  E A  Y + M++A L  D V Y  +
Sbjct: 472  EEVASLMRKMEGLQCHPDTRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTYRTL 531

Query: 468  ISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGL 647
            + +++    V  A +L  EM   D++ D      L   + E G V+ +  + +   + G 
Sbjct: 532  LYAFSIRNMVSEAEKLILEMDKKDLQIDEFTQSALTRMYLEAGMVEMSWSWFQRF-HFGG 590

Query: 648  LMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEE 827
             M+S    + I  + + GH+ EAE A       +  L V   N MI  Y       EA  
Sbjct: 591  KMSSECYSANIDAFGERGHISEAERAFNCCSEGKR-LTVLEFNVMIKAYGISKKYNEACY 649

Query: 828  IFERLKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYA 1004
            +F+ ++K+G   ++ +++ ++ M       ++A    + M+E GL+ + + Y  V+  + 
Sbjct: 650  LFDSMEKHGLSPDKCSYSSLIQMLAGADLPLKAASYVREMQEAGLVNDCIPYCAVISSFV 709

Query: 1005 SDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQ 1184
              G+ + AV+ F EM+   + PD   +  L       G  K A + L + R   + +   
Sbjct: 710  KVGQLEMAVSLFDEMIVFGIKPDVVLYGVLINAFADMGSVKDATKYLVEMRNSGLEANAV 769

Query: 1185 MWTATLSSVVNMG 1223
            ++T+ +     +G
Sbjct: 770  IYTSLIKLYTKVG 782



 Score = 79.7 bits (195), Expect = 4e-12
 Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 25/268 (9%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            ++ + Y  V+    K  R +    L++EM    V+P    YG LI+ +++ G  ++A  +
Sbjct: 289  LNVIHYNIVLRILGKSQRWDEIQRLWDEMRKRRVEPINSTYGTLIDVYSKGGRREQAMEW 348

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEAC------------RMLQSLETGLDV 764
            ++ M   G++ + V +  ++++Y   G  K+AEE              R+     +G+ V
Sbjct: 349  LKLMNERGMVPDEVTMGIVVQMYKMAGEFKKAEEFLKKWSLCKFQVEERVNGGPRSGIRV 408

Query: 765  YSS------------NCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYKRN 905
              S            N +ID Y +   V EA E F ++ + G      T   M+ M   N
Sbjct: 409  NGSSGSSVCLSSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNN 468

Query: 906  WRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTF 1085
             R+ E   + ++M  L    +  TYN+++  +A     + A   F+ M D+ + PD  T+
Sbjct: 469  GRMEEVASLMRKMEGLQCHPDTRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTY 528

Query: 1086 KSLGIVLLKCGVPKSAVEKLEKTRKKDM 1169
            ++L        +   A + + +  KKD+
Sbjct: 529  RTLLYAFSIRNMVSEAEKLILEMDKKDL 556


>ref|XP_007034933.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508713962|gb|EOY05859.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 856

 Score =  547 bits (1409), Expect = e-153
 Identities = 270/404 (66%), Positives = 327/404 (80%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD++ +EIDE+TQS+LTRMYIEAG++++SWLWF RFH  G MSSE YSANIDA+GERG+
Sbjct: 442  EMDDQLLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGNMSSEGYSANIDAFGERGH 501

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            V  AEK F CC +   LTVLEFNVMIKAYGI K FE+AC+LFDSM  HG++PDKC YNSL
Sbjct: 502  VFEAEKVFVCCQERETLTVLEFNVMIKAYGIGKSFEKACWLFDSMQGHGVVPDKCSYNSL 561

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LASADLP  A  YL++MQEAG I DC+PYCAVISS+ KLG +EMA  LY EMI + V
Sbjct: 562  IQILASADLPHVAKCYLKKMQEAGFISDCIPYCAVISSFVKLGELEMAEGLYGEMIQYKV 621

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYGVLINAFA+ G+V EAT YV  M++ GL  N+V+  SLIKLYTKVG+LKEA+E
Sbjct: 622  EPDVVVYGVLINAFADLGSVKEATSYVNAMKSAGLPGNAVIYNSLIKLYTKVGYLKEAQE 681

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
               +LQ      DVYSSNCMIDLYS+RSMV++AE IF+ LK+ G+ANEFT+AMML MYKR
Sbjct: 682  VYELLQLSGFHPDVYSSNCMIDLYSKRSMVSQAEAIFKNLKQKGDANEFTYAMMLCMYKR 741

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N R  EA  IAK+MR+LGL+T+LL+YN VLG YA DGR+K+AV TF+EM+ + + PDD T
Sbjct: 742  NGRFEEAIHIAKQMRDLGLLTDLLSYNNVLGLYAMDGRFKEAVGTFKEMMSACIQPDDST 801

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVV 1214
            FKSLG VL+KCGVPK AV +L+ T KKD  SGLQ W +TLSSVV
Sbjct: 802  FKSLGFVLMKCGVPKRAVNRLQVTWKKDAQSGLQAWISTLSSVV 845



 Score =  105 bits (261), Expect = 9e-20
 Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 19/426 (4%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREG-----------------RM 131
            +M+++ ME DE T   + ++Y +AG    +  +F ++   G                  +
Sbjct: 251  KMNKQGMEPDEVTMGIVVQLYKKAGEFQNAEEFFKKWSLNGSLKHDGSETFSAVGSDLHL 310

Query: 132  SSECYSANIDAYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKKFEEACFLF 308
            SS  Y+  ID YG+ G +  A + F   ++  +  T + FN MI   G   K EE   L 
Sbjct: 311  SSYTYNTLIDTYGKAGQLQEASETFEMMLREGIVPTTVTFNTMIHICGNHGKLEEVASLM 370

Query: 309  DSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKL 488
              M++   +PD   YN L+ + A  D  + A  Y  +M+E  L  D V Y  ++ +Y+  
Sbjct: 371  KKMEEVQCLPDTRTYNILISLHAKHDDIKMAAGYFAKMKEVCLEPDLVSYRTLLYAYSIR 430

Query: 489  GRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVL 668
              V  A +L NEM    ++ D      L   + E G ++++  + R     G  M+S   
Sbjct: 431  QMVSEAEDLINEMDDQLLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGN-MSSEGY 489

Query: 669  KSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKK 848
             + I  + + GH+ EAE+     Q  ET L V   N MI  Y       +A  +F+ ++ 
Sbjct: 490  SANIDAFGERGHVFEAEKVFVCCQERET-LTVLEFNVMIKAYGIGKSFEKACWLFDSMQG 548

Query: 849  NGEANEFTHAMMLSMYKRNWRLVE-AFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKD 1025
            +G   +      L     +  L   A    K+M+E G +++ + Y  V+  +   G  + 
Sbjct: 549  HGVVPDKCSYNSLIQILASADLPHVAKCYLKKMQEAGFISDCIPYCAVISSFVKLGELEM 608

Query: 1026 AVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLS 1205
            A   + EM+   V PD   +  L       G  K A   +   +   +     ++ + + 
Sbjct: 609  AEGLYGEMIQYKVEPDVVVYGVLINAFADLGSVKEATSYVNAMKSAGLPGNAVIYNSLIK 668

Query: 1206 SVVNMG 1223
                +G
Sbjct: 669  LYTKVG 674



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 17/227 (7%)
 Frame = +3

Query: 465  VISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLG 644
            ++    K G VE    L+NEM    +KP    YG LI+ +++ G   +A  ++  M   G
Sbjct: 200  ILGKAHKWGYVE---RLWNEMTFRGIKPINSTYGTLIDVYSKGGKKQQALCWLGKMNKQG 256

Query: 645  LLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQ----------------SLETGLDVYSSN 776
            +  + V +  +++LY K G  + AEE  +                     +  L  Y+ N
Sbjct: 257  MEPDEVTMGIVVQLYKKAGEFQNAEEFFKKWSLNGSLKHDGSETFSAVGSDLHLSSYTYN 316

Query: 777  CMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMREL 953
             +ID Y +   + EA E FE + + G      T   M+ +   + +L E   + K+M E+
Sbjct: 317  TLIDTYGKAGQLQEASETFEMMLREGIVPTTVTFNTMIHICGNHGKLEEVASLMKKMEEV 376

Query: 954  GLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSL 1094
              + +  TYN+++  +A     K A   F +M +  + PD  ++++L
Sbjct: 377  QCLPDTRTYNILISLHAKHDDIKMAAGYFAKMKEVCLEPDLVSYRTL 423


>ref|XP_006420082.1| hypothetical protein CICLE_v10004292mg [Citrus clementina]
            gi|557521955|gb|ESR33322.1| hypothetical protein
            CICLE_v10004292mg [Citrus clementina]
          Length = 864

 Score =  544 bits (1401), Expect = e-152
 Identities = 268/404 (66%), Positives = 329/404 (81%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD   +EIDE+TQS+LTRMYIEAG++++SWLWF RFH  G MSSE YSANIDAYGERG+
Sbjct: 451  EMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDAYGERGH 510

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            VL AE+AF CC +  KLTVL FNVM+KAYG+ + +++AC LFDSM  HG++PDKC YNSL
Sbjct: 511  VLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGVVPDKCSYNSL 570

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LA ADLP  A  YLR+MQEAGL+ DC+PYCAVISSY KLG++EMA E+Y +MI  +V
Sbjct: 571  VQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYVKLGQLEMAEEVYKDMIRFNV 630

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYGVLINAFA+ GNV +A  Y   M + GL  N+V+  SLIKLYTKVG+LKEA+E
Sbjct: 631  EPDVVVYGVLINAFADVGNVKQAQSYFDAMESSGLPPNAVIYNSLIKLYTKVGYLKEAQE 690

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++L+SLE   DVY+SNCMIDLYSERSMV +AEEIFE +KK G+ NEFT+AMML MYKR
Sbjct: 691  TYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDTNEFTYAMMLIMYKR 750

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N R  EA  IAK+MRE GL+++LL+YN VLG YA DGR+KD + TF++M+++ V PDD T
Sbjct: 751  NGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAVQPDDFT 810

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVV 1214
            FKSLG VL+KCGVPK AV+KLE TRKK+  SGLQ W +TLSSV+
Sbjct: 811  FKSLGAVLMKCGVPKRAVKKLELTRKKNAQSGLQAWMSTLSSVI 854



 Score =  107 bits (266), Expect = 2e-20
 Identities = 93/423 (21%), Positives = 162/423 (38%), Gaps = 91/423 (21%)
 Frame = +3

Query: 228  KLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIV 407
            +L V+ +N++++  G ++K+     L+D M   G++P    Y +L+ + +   L E A+ 
Sbjct: 191  ELNVIHYNIILRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250

Query: 408  YLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELY-----NEMISHDVKPDVIV---- 560
            +L RM E G+  D V    V+  Y K G  + A E +      E + H     +++    
Sbjct: 251  WLERMNERGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKMMIGKVE 310

Query: 561  -------------YGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVG 701
                         Y  LI+ + + G + EA+     M   G++  +V   ++I +Y    
Sbjct: 311  NGSQVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNND 370

Query: 702  HLKEAEEACRMLQSLETGLDVYSSNCMIDL------------------------------ 791
             L E +   + ++ L    D  + N +I L                              
Sbjct: 371  QLVEVDSLIKKMEELRCPPDTRTYNILIFLHAKNNKISMASRYFWKMKEANLEPDIVSYR 430

Query: 792  -----YSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY------KRNWRLVEAFWIA 935
                 YS R MV EAEE+   +   G E +E+T + +  MY      +++W     F +A
Sbjct: 431  TLLYAYSIRCMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA 490

Query: 936  KRMRELGLMTEL---------------------------LTYNLVLGFYASDGRYKDAVA 1034
              M   G    +                           L +N+++  Y     Y  A  
Sbjct: 491  GDMSSEGYSANIDAYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550

Query: 1035 TFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVV 1214
             F  M    V PD C++ SL  +L    +P  A   L K ++  +VS    + A +SS V
Sbjct: 551  LFDSMTSHGVVPDKCSYNSLVQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYV 610

Query: 1215 NMG 1223
             +G
Sbjct: 611  KLG 613


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  541 bits (1393), Expect = e-151
 Identities = 267/406 (65%), Positives = 328/406 (80%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDE+ +EIDE+TQS+LTRMYIEAG++++SWLWF RFH  G MSSECYSANIDAYGERG+
Sbjct: 460  EMDEKGIEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSECYSANIDAYGERGH 519

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            V  A + F C ++  KLTVLEFNVMIKAYG  K +E+AC LFDSM+ HG++PDKC Y+SL
Sbjct: 520  VKEAARVFACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSL 579

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASADLP+ A  YL++MQEAGL+ DCV YCAVISS+ KLG++EMA E+Y EM+  DV
Sbjct: 580  VQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDV 639

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            KPD+IVYGVLINAFA++G V EA  Y+  M+  GL  N+V+  SLIKLYTKVG+L+EA+E
Sbjct: 640  KPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQE 699

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++LQS + G + YSSNCMIDLYSE+SMV  AEEIFE +K+ G+ANEFT+AMML MYKR
Sbjct: 700  TYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRKGDANEFTYAMMLCMYKR 759

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
                 +A  IAK+MRELGL+T LL+YN VLG YA DGR+K+AV TF+EM+ + + PDDCT
Sbjct: 760  LGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCT 819

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLGIVL+KCG+ K AV KLE T KKD  SGLQ W A LS+VV +
Sbjct: 820  FKSLGIVLVKCGISKQAVGKLEATTKKDRHSGLQTWLAALSAVVEV 865



 Score =  103 bits (257), Expect = 3e-19
 Identities = 101/433 (23%), Positives = 188/433 (43%), Gaps = 26/433 (6%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWF------------------LRFHREGR 128
            +M+++ ME DE T   + +MY +AG   ++  +F                  +R   E +
Sbjct: 264  KMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREALRHKVTGKASVRVENERQ 323

Query: 129  M----SSECYSANIDAYGERGYVLLAEKAFYCCVKVLKL-TVLEFNVMIKAYGISKKFEE 293
            M    SS  Y+  ID YG+ G +  A   F   ++   L T + FN MI   G   + EE
Sbjct: 324  MDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEE 383

Query: 294  ACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVIS 473
               L   M++    PD   YN L+ + A  +    A  Y +RM++  L  D V Y  ++ 
Sbjct: 384  VALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLY 443

Query: 474  SYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLM 653
            +++    V  A  L +EM    ++ D      L   + E G ++++  +       G  M
Sbjct: 444  AFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAG-NM 502

Query: 654  NSVVLKSLIKLYTKVGHLKEAEE--ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEE 827
            +S    + I  Y + GH+KEA    ACR+ Q+    L V   N MI  Y       +A +
Sbjct: 503  SSECYSANIDAYGERGHVKEAARVFACRLEQN---KLTVLEFNVMIKAYGFGKNYEKACD 559

Query: 828  IFERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYA 1004
            +F+ ++ +G   ++ +++ ++ +        +A    K+M+E GL+++ + Y  V+  + 
Sbjct: 560  LFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFV 619

Query: 1005 SDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQ 1184
              G+ + A   ++EM+   V PD   +  L       G  K A+  ++  +   +     
Sbjct: 620  KLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTV 679

Query: 1185 MWTATLSSVVNMG 1223
            ++ + +     +G
Sbjct: 680  IYNSLIKLYTKVG 692



 Score = 87.8 bits (216), Expect = 2e-14
 Identities = 78/381 (20%), Positives = 154/381 (40%), Gaps = 55/381 (14%)
 Frame = +3

Query: 246  FNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASAD------------- 386
            +  +I  Y      E+A    + M++ G+ PD+     +VQM   A              
Sbjct: 242  YGTLIDVYSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS 301

Query: 387  --------LPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
                    +   A V +   ++  + +    Y  +I +Y K G+++ A +++ EM+   +
Sbjct: 302  LREALRHKVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRI 361

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
             P  + +  +I+     G ++E    ++ M  L    ++     LI ++ K   +  A  
Sbjct: 362  LPTTVTFNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAAS 421

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY- 896
              + ++  +   D+ S   ++  +S R MV +AE +   + + G E +E+T + +  MY 
Sbjct: 422  YFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYI 481

Query: 897  -----KRNWRLVEAFWIAKRMR------------ELGLMTE---------------LLTY 980
                 +++W     F +A  M             E G + E               +L +
Sbjct: 482  EAGMLEKSWLWFWRFHLAGNMSSECYSANIDAYGERGHVKEAARVFACRLEQNKLTVLEF 541

Query: 981  NLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRK 1160
            N+++  Y     Y+ A   F  M    V PD C++ SL  +L    +P  A   L+K ++
Sbjct: 542  NVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYLKKMQE 601

Query: 1161 KDMVSGLQMWTATLSSVVNMG 1223
              +VS    + A +SS V +G
Sbjct: 602  AGLVSDCVQYCAVISSFVKLG 622



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
 Frame = +3

Query: 513  LYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYT 692
            L NEM    + P    YG LI+ +++ G  ++A  ++  M   G+  + V +  ++++Y 
Sbjct: 226  LCNEMSFKRISPINSTYGTLIDVYSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYK 285

Query: 693  KVGHLKEAEEACRML---------------------QSLETGLDVYSSNCMIDLYSERSM 809
            K G  ++AEE  +                       + ++  L  ++ N MID Y +   
Sbjct: 286  KAGEFQKAEEFFKKWSLREALRHKVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQ 345

Query: 810  VAEAEEIF-ERLKKNGEANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNL 986
            + EA +IF E L+K       T   M+ +     +L E   + ++M EL    +  TYN+
Sbjct: 346  IKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNI 405

Query: 987  VLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSL 1094
            ++  +A       A + F+ M    + PD  ++++L
Sbjct: 406  LIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTL 441


>ref|XP_006489493.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Citrus sinensis]
          Length = 864

 Score =  540 bits (1390), Expect = e-150
 Identities = 264/404 (65%), Positives = 326/404 (80%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD   +EIDE+TQS+LTRMYIEAG++++SWLWF RFH  G MSSE YSANID YGERG+
Sbjct: 451  EMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGH 510

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            VL AE+AF CC +  KLTVL FNVM+KAYG+ + +++AC LFDSM  HG +PDKC YNSL
Sbjct: 511  VLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSL 570

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LA ADLP  A  YLR+MQEAGL+ DC+PYCAVISSY KLG++EMA E+Y +MI  +V
Sbjct: 571  IQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNV 630

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYG+LINAFA+ GNV +A  Y   M + GL  N+V+  SLIKLYTKVG+LKEA+E
Sbjct: 631  EPDVVVYGILINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQE 690

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++L+SLE   DVY+SNCMIDLYSERSMV +AEEIFE +KK G+ANEFT+AMML MYKR
Sbjct: 691  TYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYKR 750

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            N R  EA  IAK+MRE GL+++LL+YN VLG YA DGR+KD + TF++M+++ + PDD T
Sbjct: 751  NGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFT 810

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVV 1214
            FKSLG VL+KCGVPK AV KLE  RKK+  SGLQ W +TLSSV+
Sbjct: 811  FKSLGAVLMKCGVPKRAVNKLELARKKNAQSGLQAWMSTLSSVI 854



 Score =  103 bits (258), Expect = 2e-19
 Identities = 92/423 (21%), Positives = 160/423 (37%), Gaps = 91/423 (21%)
 Frame = +3

Query: 228  KLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIV 407
            +L V+ +N++++  G ++K+     L+D M   G++P    Y +L+ + +   L E A+ 
Sbjct: 191  ELNVIHYNIILRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250

Query: 408  YLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMIS-------HDVKPDV---- 554
            +L RM E G+  D V    V+  Y K G  + A E + +  S        D K  +    
Sbjct: 251  WLERMNERGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVE 310

Query: 555  -----------IVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVG 701
                         Y  LI+ + + G + EA+     M   G++  +V   ++I +Y    
Sbjct: 311  NGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNND 370

Query: 702  HLKEAEEACRMLQSLETGLDVYSSNCMIDL------------------------------ 791
             L E +   + ++ L    D  + N +I L                              
Sbjct: 371  QLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYR 430

Query: 792  -----YSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY------KRNWRLVEAFWIA 935
                 YS R MV EAEE+   +   G E +E+T + +  MY      +++W     F +A
Sbjct: 431  TLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA 490

Query: 936  KRMRELGLMTEL---------------------------LTYNLVLGFYASDGRYKDAVA 1034
              M   G    +                           L +N+++  Y     Y  A  
Sbjct: 491  GDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550

Query: 1035 TFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVV 1214
             F  M      PD C++ SL  +L    +P  A   L K ++  +VS    + A +SS +
Sbjct: 551  LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610

Query: 1215 NMG 1223
             +G
Sbjct: 611  KLG 613


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  526 bits (1354), Expect = e-146
 Identities = 255/406 (62%), Positives = 321/406 (79%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFTQS+LTRMYI+AG+++ESW WF RFH  G MSSECYSANIDAYGERG+
Sbjct: 447  EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGF 506

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AE+ F  C +  K TVLEFNVMIKAYG+ K + +A  +FDSM  +G++PDKC Y+SL
Sbjct: 507  ILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSL 566

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+L  AD+P  A+ YL++MQ AGL+ DC+PY  VISS++KLG +EMA +LY EM+ H V
Sbjct: 567  IQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGV 626

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PD+IVYGVLINAFA+ G+V EA  YV  M+  GL  N+V+  SLIKLYTKVG+LKEA E
Sbjct: 627  QPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHE 686

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
            A +ML+  + G  +YSSNCMIDLYSERSMV EAEEIFE LKK GEANEFT AMML MYK+
Sbjct: 687  AYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKK 746

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R+ EA  +A++M+E GL+++LL++N ++  YA DGR+K+AV+ F+EM+ + V PD+CT
Sbjct: 747  IGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECT 806

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            +KSLG+VLLKCGV K AV KLE T KKD  SGLQ W + LSSVV M
Sbjct: 807  YKSLGVVLLKCGVSKQAVSKLEVTXKKDAQSGLQAWVSVLSSVVGM 852



 Score =  113 bits (282), Expect = 3e-22
 Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 28/419 (6%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSEC-------------- 143
            M+E+ ME DE T   + ++Y +AG   ++  +F ++     M  E               
Sbjct: 248  MNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESS 307

Query: 144  ------------YSANIDAYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKK 284
                        Y+  ID YG+ G +  A   F   +K  +  T + FN MI   G   +
Sbjct: 308  LHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQ 367

Query: 285  FEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCA 464
             +E  FL   M++    PD   YN L+ + A  D  + A  Y   M+EAGL  D V Y  
Sbjct: 368  LKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRT 427

Query: 465  VISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLG 644
            ++ +Y+    V  A +L  EM    ++ D      L   + + G ++E+  +       G
Sbjct: 428  LLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAG 487

Query: 645  LLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAE 824
              M+S    + I  Y + G + EAE      Q  E    V   N MI  Y      A+A+
Sbjct: 488  H-MSSECYSANIDAYGERGFILEAERVFVSCQE-EKKCTVLEFNVMIKAYGVVKDYAKAQ 545

Query: 825  EIFERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFY 1001
            +IF+ +K NG   ++ +++ ++ +         A    K+M+  GL+++ + Y++V+  +
Sbjct: 546  KIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSF 605

Query: 1002 ASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSG 1178
            +  G  + A   +REM+   V PD   +  L       G  K A+  +    K+D +SG
Sbjct: 606  SKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYV-NAMKRDGLSG 663



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            ++ + Y  V+ +  K  +  +   L+ EM    +KP    YG LI+ +++ G  +EA  +
Sbjct: 185  VNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVW 244

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLET---------------- 752
            +  M   G+  + V +  +++LY K G  ++AE   +   S  +                
Sbjct: 245  LERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKV 304

Query: 753  ---------GLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYKR 902
                      L  Y+ N +ID Y +   + EA   FE + K G      T   M+ +   
Sbjct: 305  ESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGN 364

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            + +L E  ++ ++M EL    +  TYN+++  YA       A   F EM ++ + PD  +
Sbjct: 365  HGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVS 424

Query: 1083 FKSL 1094
            +++L
Sbjct: 425  YRTL 428


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Cucumis sativus]
          Length = 858

 Score =  526 bits (1354), Expect = e-146
 Identities = 255/406 (62%), Positives = 321/406 (79%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFTQS+LTRMYI+AG+++ESW WF RFH  G MSSECYSANIDAYGERG+
Sbjct: 446  EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGF 505

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AE+ F  C +  K TVLEFNVMIKAYG+ K + +A  +FDSM  +G++PDKC Y+SL
Sbjct: 506  ILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSL 565

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+L  AD+P  A+ YL++MQ AGL+ DC+PY  VISS++KLG +EMA +LY EM+ H V
Sbjct: 566  IQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGV 625

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PD+IVYGVLINAFA+ G+V EA  YV  M+  GL  N+V+  SLIKLYTKVG+LKEA E
Sbjct: 626  QPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHE 685

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
            A +ML+  + G  +YSSNCMIDLYSERSMV EAEEIFE LKK GEANEFT AMML MYK+
Sbjct: 686  AYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKK 745

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R+ EA  +A++M+E GL+++LL++N ++  YA DGR+K+AV+ F+EM+ + V PD+CT
Sbjct: 746  IGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECT 805

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            +KSLG+VLLKCGV K AV KLE T KKD  SGLQ W + LSSVV M
Sbjct: 806  YKSLGVVLLKCGVSKQAVSKLEVTAKKDAQSGLQAWVSVLSSVVGM 851



 Score =  113 bits (282), Expect = 3e-22
 Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 28/419 (6%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSEC-------------- 143
            M+E+ ME DE T   + ++Y +AG   ++  +F ++     M  E               
Sbjct: 247  MNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESS 306

Query: 144  ------------YSANIDAYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKK 284
                        Y+  ID YG+ G +  A   F   +K  +  T + FN MI   G   +
Sbjct: 307  LHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQ 366

Query: 285  FEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCA 464
             +E  FL   M++    PD   YN L+ + A  D  + A  Y   M+EAGL  D V Y  
Sbjct: 367  LKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRT 426

Query: 465  VISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLG 644
            ++ +Y+    V  A +L  EM    ++ D      L   + + G ++E+  +       G
Sbjct: 427  LLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAG 486

Query: 645  LLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAE 824
              M+S    + I  Y + G + EAE      Q  E    V   N MI  Y      A+A+
Sbjct: 487  H-MSSECYSANIDAYGERGFILEAERVFVSCQE-EKKCTVLEFNVMIKAYGVVKDYAKAQ 544

Query: 825  EIFERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFY 1001
            +IF+ +K NG   ++ +++ ++ +         A    K+M+  GL+++ + Y++V+  +
Sbjct: 545  KIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSF 604

Query: 1002 ASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSG 1178
            +  G  + A   +REM+   V PD   +  L       G  K A+  +    K+D +SG
Sbjct: 605  SKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYV-NAMKRDGLSG 662



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            ++ + Y  V+ +  K  +  +   L+ EM    +KP    YG LI+ +++ G  +EA  +
Sbjct: 184  VNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVW 243

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLET---------------- 752
            +  M   G+  + V +  +++LY K G  ++AE   +   S  +                
Sbjct: 244  LERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKV 303

Query: 753  ---------GLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYKR 902
                      L  Y+ N +ID Y +   + EA   FE + K G      T   M+ +   
Sbjct: 304  ESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGN 363

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            + +L E  ++ ++M EL    +  TYN+++  YA       A   F EM ++ + PD  +
Sbjct: 364  HGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVS 423

Query: 1083 FKSL 1094
            +++L
Sbjct: 424  YRTL 427


>ref|XP_007227046.1| hypothetical protein PRUPE_ppa001385mg [Prunus persica]
            gi|462423982|gb|EMJ28245.1| hypothetical protein
            PRUPE_ppa001385mg [Prunus persica]
          Length = 841

 Score =  525 bits (1351), Expect = e-146
 Identities = 256/406 (63%), Positives = 323/406 (79%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFTQS+LTRMYIE+G++++SW WF+RFH  G+MSSEC SANIDAYGERG+
Sbjct: 430  EMDERGLEIDEFTQSALTRMYIESGMLEKSWFWFMRFHLSGKMSSECCSANIDAYGERGH 489

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AEK F+CC +V KL+VLEFNVMIKAYG+ K +++AC LF+SM+ HG++PDKC Y+SL
Sbjct: 490  ILEAEKVFFCCQEVKKLSVLEFNVMIKAYGVGKHYDKACELFNSMESHGVVPDKCSYSSL 549

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+L+SA++P  A  YLR+MQEA L+ DC+PYCAVISS+AKLG++EMA  LY EM+   V
Sbjct: 550  IQILSSANMPHIAKPYLRKMQEARLVSDCIPYCAVISSFAKLGQLEMAEGLYKEMVGFSV 609

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDVIV+GVLINAFA+ G+V EA  Y   M+  GL  N+V+  SLIKLYTKVG LKEAEE
Sbjct: 610  QPDVIVFGVLINAFADVGSVKEALSYADAMKKAGLPGNTVIYNSLIKLYTKVGFLKEAEE 669

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              R++QS E G  +Y+SNCMIDLYSE+SMV  AEEIF+ LK+ G ANEF+ AMML MYK+
Sbjct: 670  TYRLIQSSEDGPSIYASNCMIDLYSEQSMVKPAEEIFDGLKRKGNANEFSCAMMLCMYKK 729

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R  EA  IA++MREL L+T+LL+YN VLG Y   GR+K+ V TF+EM+ + + PDDCT
Sbjct: 730  MGRFEEAIQIAEQMRELRLLTDLLSYNNVLGLYVMYGRFKEVVETFKEMMRAAIQPDDCT 789

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLG+VL+K G+ K AV KLE + KKD  SGLQ W + L SVV M
Sbjct: 790  FKSLGLVLVKSGISKQAVAKLEVSVKKDAQSGLQAWMSALYSVVRM 835



 Score =  107 bits (268), Expect = 1e-20
 Identities = 99/432 (22%), Positives = 187/432 (43%), Gaps = 25/432 (5%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDES------WLWFLRFHREGR------------ 128
            +M+++ M+ DE T   +  +Y +AG   ++      W   L F +EG             
Sbjct: 233  KMNKQGMKPDEVTMGIVVHLYKKAGEFQKAEDFFDKWSLSLSFRQEGTSTTAAGGLGSSL 292

Query: 129  -----MSSECYSANIDAYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKKFE 290
                 +SS  Y+  ID YG+ G +  A + F   ++  +  T + FN M+   G   + E
Sbjct: 293  HSHVSLSSHTYNTLIDTYGKAGQLKEASEIFATMLREGIAPTTVTFNTMMHICGNHGRLE 352

Query: 291  EACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVI 470
            E   L   M++     D   YN L+ + A  D  + A  Y  +M+EA L  D V Y  ++
Sbjct: 353  EVASLMQKMEEIRCPADTRTYNILISLHAKHDNIDMATKYFTKMKEAHLEPDHVSYRILL 412

Query: 471  SSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLL 650
             +Y+    V  A +L +EM    ++ D      L   + E+G ++++ ++       G  
Sbjct: 413  YAYSLRHMVSEAEDLISEMDERGLEIDEFTQSALTRMYIESGMLEKSWFWFMRFHLSGK- 471

Query: 651  MNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEI 830
            M+S    + I  Y + GH+ EAE+     Q ++  L V   N MI  Y       +A E+
Sbjct: 472  MSSECCSANIDAYGERGHILEAEKVFFCCQEVKK-LSVLEFNVMIKAYGVGKHYDKACEL 530

Query: 831  FERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYAS 1007
            F  ++ +G   ++ +++ ++ +         A    ++M+E  L+++ + Y  V+  +A 
Sbjct: 531  FNSMESHGVVPDKCSYSSLIQILSSANMPHIAKPYLRKMQEARLVSDCIPYCAVISSFAK 590

Query: 1008 DGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQM 1187
             G+ + A   ++EM+   V PD   F  L       G  K A+   +  +K  +     +
Sbjct: 591  LGQLEMAEGLYKEMVGFSVQPDVIVFGVLINAFADVGSVKEALSYADAMKKAGLPGNTVI 650

Query: 1188 WTATLSSVVNMG 1223
            + + +     +G
Sbjct: 651  YNSLIKLYTKVG 662


>gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis]
          Length = 857

 Score =  517 bits (1331), Expect = e-144
 Identities = 259/406 (63%), Positives = 316/406 (77%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            E D R +EIDE+TQS+LTRMYIEAG +++SWLWF RFH  G M+SECYSANIDAYGERG+
Sbjct: 446  ETDCRGLEIDEYTQSALTRMYIEAGNLEKSWLWFRRFHLAGNMTSECYSANIDAYGERGH 505

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE  F CC +  KL+VLEFNVMIKAYG++K + +AC LFDSM++HG+ PDKC Y+SL
Sbjct: 506  IREAENVFRCCQEGNKLSVLEFNVMIKAYGLAKCYHQACELFDSMERHGVFPDKCSYSSL 565

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASAD+P  A  YLR+MQ++GL+ DC+PYC VISS+ KLGR+EMA  LY EM+  DV
Sbjct: 566  VQILASADMPHEAKSYLRKMQDSGLVRDCIPYCTVISSFVKLGRLEMAEGLYKEMVGFDV 625

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDVIV+G+LINAFA+ G V EA  YV  M+  GL  N+V+  SLIKLYTKVG LKEA+E
Sbjct: 626  QPDVIVFGILINAFADVGCVKEALGYVDAMKKAGLPGNTVIYNSLIKLYTKVGFLKEAQE 685

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++LQS E G  VYSSNCMIDLYSERSMV  AEEIFE LK+   ANEFT AMML MYK+
Sbjct: 686  TYKLLQSSEEGPAVYSSNCMIDLYSERSMVQPAEEIFESLKRKRAANEFTFAMMLCMYKK 745

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R  EA  IA++MRE GL+T+LL+YN +LG YA  GR+KD VATF EM+++ V PDDCT
Sbjct: 746  LGRFEEAIAIARQMREQGLLTDLLSYNNILGLYAMCGRFKDVVATFNEMIEASVEPDDCT 805

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
             KSL +VL+K GVPK AV KLE   KKD  +GL+ W + LSSVV +
Sbjct: 806  LKSLAVVLVKSGVPKKAVAKLEVETKKDARNGLRKWVSALSSVVGV 851



 Score =  119 bits (297), Expect = 6e-24
 Identities = 107/432 (24%), Positives = 190/432 (43%), Gaps = 25/432 (5%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRF------HREGR------------ 128
            +M+E+ ME DE T   + +MY +AG   ++  +F ++       +EG             
Sbjct: 249  KMNEQGMEPDEVTMGIVVQMYKKAGEFQKAEDFFKKWSLGEVLRKEGDAMNGTTKVEGAL 308

Query: 129  -----MSSECYSANIDAYGERGYVLLAEKAFYCCVKVLKL-TVLEFNVMIKAYGISKKFE 290
                 +SS  Y+  ID YG+ G +  A + F   ++  K  T + FN MI   G + + E
Sbjct: 309  NSNVCLSSHTYNMLIDTYGKAGQLKEASEVFAQMLREGKAPTTVTFNTMIHICGNNGQLE 368

Query: 291  EACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVI 470
            E   L   M++    PD   YN L+ + A  D    A  Y R+M+EA L  D V Y  ++
Sbjct: 369  EVNSLMRKMEELRCPPDTRTYNILISLHAKHDNINMATNYFRKMKEASLEPDLVSYRTLL 428

Query: 471  SSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLL 650
             +Y+    V  A +L  E     ++ D      L   + E GN++++  + R     G  
Sbjct: 429  YAYSIRQMVHEAEDLIAETDCRGLEIDEYTQSALTRMYIEAGNLEKSWLWFRRFHLAG-N 487

Query: 651  MNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEI 830
            M S    + I  Y + GH++EAE   R  Q     L V   N MI  Y       +A E+
Sbjct: 488  MTSECYSANIDAYGERGHIREAENVFRCCQE-GNKLSVLEFNVMIKAYGLAKCYHQACEL 546

Query: 831  FERLKKNGE-ANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYAS 1007
            F+ ++++G   ++ +++ ++ +        EA    ++M++ GL+ + + Y  V+  +  
Sbjct: 547  FDSMERHGVFPDKCSYSSLVQILASADMPHEAKSYLRKMQDSGLVRDCIPYCTVISSFVK 606

Query: 1008 DGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQM 1187
             GR + A   ++EM+   V PD   F  L       G  K A+  ++  +K  +     +
Sbjct: 607  LGRLEMAEGLYKEMVGFDVQPDVIVFGILINAFADVGCVKEALGYVDAMKKAGLPGNTVI 666

Query: 1188 WTATLSSVVNMG 1223
            + + +     +G
Sbjct: 667  YNSLIKLYTKVG 678



 Score = 84.3 bits (207), Expect = 2e-13
 Identities = 78/382 (20%), Positives = 144/382 (37%), Gaps = 56/382 (14%)
 Frame = +3

Query: 246  FNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQ 425
            +  +I  Y      +EA      M++ G+ PD+     +VQM   A   + A  + ++  
Sbjct: 227  YGTLIDVYSKGGLKKEALVWLAKMNEQGMEPDEVTMGIVVQMYKKAGEFQKAEDFFKKWS 286

Query: 426  ----------------------EAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHD 539
                                   + + +    Y  +I +Y K G+++ A E++ +M+   
Sbjct: 287  LGEVLRKEGDAMNGTTKVEGALNSNVCLSSHTYNMLIDTYGKAGQLKEASEVFAQMLREG 346

Query: 540  VKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAE 719
              P  + +  +I+     G ++E    +R M  L    ++     LI L+ K  ++  A 
Sbjct: 347  KAPTTVTFNTMIHICGNNGQLEEVNSLMRKMEELRCPPDTRTYNILISLHAKHDNINMAT 406

Query: 720  EACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY 896
               R ++      D+ S   ++  YS R MV EAE++       G E +E+T + +  MY
Sbjct: 407  NYFRKMKEASLEPDLVSYRTLLYAYSIRQMVHEAEDLIAETDCRGLEIDEYTQSALTRMY 466

Query: 897  ------KRNWRLVEAFWIAKRMR---------------------------ELGLMTELLT 977
                  +++W     F +A  M                            + G    +L 
Sbjct: 467  IEAGNLEKSWLWFRRFHLAGNMTSECYSANIDAYGERGHIREAENVFRCCQEGNKLSVLE 526

Query: 978  YNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTR 1157
            +N+++  Y     Y  A   F  M    V PD C++ SL  +L    +P  A   L K +
Sbjct: 527  FNVMIKAYGLAKCYHQACELFDSMERHGVFPDKCSYSSLVQILASADMPHEAKSYLRKMQ 586

Query: 1158 KKDMVSGLQMWTATLSSVVNMG 1223
               +V     +   +SS V +G
Sbjct: 587  DSGLVRDCIPYCTVISSFVKLG 608


>ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Fragaria vesca subsp. vesca]
          Length = 840

 Score =  507 bits (1306), Expect = e-141
 Identities = 245/406 (60%), Positives = 318/406 (78%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDER +EIDEFT S+LTRMYIEAG++++SW+WF+RFH  G+M S+CY+ANIDAYGERG+
Sbjct: 429  EMDERGLEIDEFTHSALTRMYIEAGMLEKSWVWFMRFHLSGKMGSDCYAANIDAYGERGH 488

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AEK F CC +V KL+V+EFNVMIKAYG+ K++  AC LFDSM+ HG+IPD+C Y+SL
Sbjct: 489  ISEAEKVFNCCREVNKLSVVEFNVMIKAYGVGKQYSRACQLFDSMESHGVIPDRCSYSSL 548

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LAS D+P TA  YL++M E+GL+ DC+PYCAVISS+AKLG++E A E+Y +M+   V
Sbjct: 549  IQILASGDMPHTARPYLKKMHESGLVHDCIPYCAVISSFAKLGQLEKAEEVYKQMVGFSV 608

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDVIV+GVLINAFAE G V EA  Y   M+  G   N+V+  +LIKLYTKVG LKEAEE
Sbjct: 609  QPDVIVFGVLINAFAEVGCVKEALSYADAMKRAGFPGNTVIYNTLIKLYTKVGLLKEAEE 668

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++L + E G  +Y+SNCMIDLYSER MV  AEE+F+ LK  G+ANEFT AMM+ MYKR
Sbjct: 669  TYKLLLASEDGPAIYASNCMIDLYSERCMVKPAEELFDSLKSKGDANEFTFAMMVCMYKR 728

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R  EA  IAK+MREL L++++L+YN V+G YA+ GR+K+ V TF+EM  + + PD+CT
Sbjct: 729  MGRFEEAIQIAKQMRELRLLSDVLSYNNVIGLYATYGRFKEVVGTFKEMTKAGIQPDECT 788

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLG+VL+K G+ K AV KLE + KKD  SGLQ W + LS+VV +
Sbjct: 789  FKSLGLVLVKSGLSKQAVGKLEVSVKKDAQSGLQAWMSALSAVVRV 834



 Score = 94.4 bits (233), Expect = 2e-16
 Identities = 87/413 (21%), Positives = 170/413 (41%), Gaps = 6/413 (1%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANI-DAYGERG 179
            EM+  R+E    T  +L  +Y + G   E+ +W  R  ++G    E   A +   Y + G
Sbjct: 215  EMNVERIEPINSTYGTLIDVYSKGGFEKEALVWLQRMTKQGMKPDEVTMAIVLQLYKKAG 274

Query: 180  YVLLAEKAFYCCVKVL-----KLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDK 344
                AE+ F    +        L+   +N +I  +G + + +EA  +F  M + G+ P  
Sbjct: 275  EYRKAEEFFEKWSESALHSHGSLSSHTYNTLIDTHGKAGRLKEASEIFALMLREGIAPTT 334

Query: 345  CGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNE 524
              +N+++                                 +  ++ +L  V+  ++   E
Sbjct: 335  VTFNTMIH--------------------------------ICGNHGQLSEVDSLMQKMEE 362

Query: 525  MISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGH 704
            +      PD   Y +LI+  A   N+D AT Y   M+   L  + V  ++L+  Y+    
Sbjct: 363  V---RCPPDTRTYNILISLHARHDNIDMATNYFAKMKEACLEPDPVSYRTLLYAYSVRHM 419

Query: 705  LKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMM 884
            + +AEE    +      +D ++ + +  +Y E  M+ ++   F R   +G+     +A  
Sbjct: 420  VSKAEELVSEMDERGLEIDEFTHSALTRMYIEAGMLEKSWVWFMRFHLSGKMGSDCYAAN 479

Query: 885  LSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLV 1064
            +  Y     + EA  +    RE+  ++ ++ +N+++  Y    +Y  A   F  M    V
Sbjct: 480  IDAYGERGHISEAEKVFNCCREVNKLS-VVEFNVMIKAYGVGKQYSRACQLFDSMESHGV 538

Query: 1065 SPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
             PD C++ SL  +L    +P +A   L+K  +  +V     + A +SS   +G
Sbjct: 539  IPDRCSYSSLIQILASGDMPHTARPYLKKMHESGLVHDCIPYCAVISSFAKLG 591



 Score = 72.8 bits (177), Expect = 5e-10
 Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            +  + Y  V+    K  +      +++EM    ++P    YG LI+ +++ G   EA  +
Sbjct: 188  VHVIHYNIVLRILGKAKKWRHLRSVWDEMNVERIEPINSTYGTLIDVYSKGGFEKEALVW 247

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQS----LETGLDVYSSNCMID 788
            ++ M   G+  + V +  +++LY K G  ++AEE               L  ++ N +ID
Sbjct: 248  LQRMTKQGMKPDEVTMAIVLQLYKKAGEYRKAEEFFEKWSESALHSHGSLSSHTYNTLID 307

Query: 789  LYSERSMVAEAEEIFERLKKNGEA-NEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMT 965
             + +   + EA EIF  + + G A    T   M+ +   + +L E   + ++M E+    
Sbjct: 308  THGKAGRLKEASEIFALMLREGIAPTTVTFNTMIHICGNHGQLSEVDSLMQKMEEVRCPP 367

Query: 966  ELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKL 1145
            +  TYN+++  +A       A   F +M ++ + PD  ++++    LL     +  V K 
Sbjct: 368  DTRTYNILISLHARHDNIDMATNYFAKMKEACLEPDPVSYRT----LLYAYSVRHMVSKA 423

Query: 1146 EKTRKKDMVSGLQMWTATLSSVVNM 1220
            E+   +    GL++   T S++  M
Sbjct: 424  EELVSEMDERGLEIDEFTHSALTRM 448


>ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Populus trichocarpa]
            gi|550329405|gb|ERP56161.1| hypothetical protein
            POPTR_0010s08940g [Populus trichocarpa]
          Length = 845

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/406 (62%), Positives = 313/406 (77%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMDE+ +EIDE+TQS+LTRMYIEAG++++SWLWF RFH  G MSSECYSA+IDAYGERG+
Sbjct: 448  EMDEKGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLMGNMSSECYSASIDAYGERGH 507

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +L AEK F  C +   LTVL FNVMIKAYG+++K+++A               +C Y+S+
Sbjct: 508  ILEAEKVFMSCQEGKMLTVLVFNVMIKAYGLAQKYDKAY--------------RCSYSSI 553

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            +Q+LA ADLP+ A  YL++MQEAGL+ DC+ YCAVISS+ K G++E A  LYNEMI  DV
Sbjct: 554  IQILAGADLPDKARHYLKKMQEAGLVSDCISYCAVISSFVKFGKLEKAEGLYNEMIGFDV 613

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            KPDVIVYGVLINAFA+ G+V EA  YV  M+  GL  N+V+  SLIKLYTKVG+LKEAEE
Sbjct: 614  KPDVIVYGVLINAFADAGSVKEALGYVDAMKRAGLPGNTVIYNSLIKLYTKVGYLKEAEE 673

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++LQS ++G D YSSNCMIDLYSE+SMV +AE+IFE LK+ G  NEFT AMML MYKR
Sbjct: 674  TYQLLQSSDSGPDAYSSNCMIDLYSEQSMVKQAEKIFESLKRKGNTNEFTFAMMLCMYKR 733

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              R  EA  IAK+MR+LGL+T+LL+YN VLG YA DGR+K+AV TF+EM+++ V PDDCT
Sbjct: 734  LGRFEEATQIAKQMRDLGLLTDLLSYNNVLGLYALDGRFKEAVGTFKEMVEASVQPDDCT 793

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            FKSLGIVL+KCG+ K AV KLE T K D   GLQ W   LS+V ++
Sbjct: 794  FKSLGIVLVKCGISKKAVSKLEATTKNDYQKGLQAWMLALSTVADI 839



 Score = 97.1 bits (240), Expect = 3e-17
 Identities = 90/429 (20%), Positives = 183/429 (42%), Gaps = 22/429 (5%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            +M++R M  DE T   + +MY +AG   ++  +F  +     +  E  S    + G +  
Sbjct: 252  KMNDRGMVPDEVTMGIVIQMYKKAGEFQKAEEFFKNWTLGESIKHEGTSKA--SAGVQNG 309

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            V ++          + L+   +N +I  YG + + +EA   F  M + G++P    +N++
Sbjct: 310  VQVS----------VSLSSYTYNTLIDTYGKAGQLKEASETFAKMLREGIVPTTVTFNTM 359

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            + +  +    E A   +++M+E     D   Y  +IS +AK   + MA   +  M    +
Sbjct: 360  IHICGNHGQLEEAGSLMQKMEELRCPPDTRTYNILISLHAKHDNISMAASYFKRMKEARL 419

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
             PD + Y  L+ AF+    V +A   V  M   GL ++     +L ++Y + G L+++  
Sbjct: 420  VPDHVSYRTLLYAFSIRHMVSDAEDLVSEMDEKGLEIDEYTQSALTRMYIEAGMLEKSWL 479

Query: 723  ACRMLQSL-ETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYK 899
              R    +     + YS++  ID Y ER  + EAE++F   ++          +M+  Y 
Sbjct: 480  WFRRFHLMGNMSSECYSAS--IDAYGERGHILEAEKVFMSCQEGKMLTVLVFNVMIKAYG 537

Query: 900  RNWRLVEAFWIA---------------------KRMRELGLMTELLTYNLVLGFYASDGR 1016
               +  +A+  +                     K+M+E GL+++ ++Y  V+  +   G+
Sbjct: 538  LAQKYDKAYRCSYSSIIQILAGADLPDKARHYLKKMQEAGLVSDCISYCAVISSFVKFGK 597

Query: 1017 YKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTA 1196
             + A   + EM+   V PD   +  L       G  K A+  ++  ++  +     ++ +
Sbjct: 598  LEKAEGLYNEMIGFDVKPDVIVYGVLINAFADAGSVKEALGYVDAMKRAGLPGNTVIYNS 657

Query: 1197 TLSSVVNMG 1223
             +     +G
Sbjct: 658  LIKLYTKVG 666



 Score = 80.1 bits (196), Expect = 3e-12
 Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
 Frame = +3

Query: 513  LYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYT 692
            L NEM    + P    YG LI+ +++ G  +EA ++++ M + G++ + V +  +I++Y 
Sbjct: 214  LCNEMRIKQILPVNSTYGTLIDVYSKGGLKEEALHWLKKMNDRGMVPDEVTMGIVIQMYK 273

Query: 693  KVGHLKEAEE---------------ACRMLQSLETGLDV------YSSNCMIDLYSERSM 809
            K G  ++AEE                 +    ++ G+ V      Y+ N +ID Y +   
Sbjct: 274  KAGEFQKAEEFFKNWTLGESIKHEGTSKASAGVQNGVQVSVSLSSYTYNTLIDTYGKAGQ 333

Query: 810  VAEAEEIFERLKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNL 986
            + EA E F ++ + G      T   M+ +   + +L EA  + ++M EL    +  TYN+
Sbjct: 334  LKEASETFAKMLREGIVPTTVTFNTMIHICGNHGQLEEAGSLMQKMEELRCPPDTRTYNI 393

Query: 987  VLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSL 1094
            ++  +A       A + F+ M ++ + PD  ++++L
Sbjct: 394  LISLHAKHDNISMAASYFKRMKEARLVPDHVSYRTL 429



 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 74/368 (20%), Positives = 147/368 (39%), Gaps = 42/368 (11%)
 Frame = +3

Query: 246  FNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQ 425
            +  +I  Y      EEA      M+  G++PD+     ++QM   A   + A  + +   
Sbjct: 230  YGTLIDVYSKGGLKEEALHWLKKMNDRGMVPDEVTMGIVIQMYKKAGEFQKAEEFFKNWT 289

Query: 426  ---------------------EAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
                                 +  + +    Y  +I +Y K G+++ A E + +M+   +
Sbjct: 290  LGESIKHEGTSKASAGVQNGVQVSVSLSSYTYNTLIDTYGKAGQLKEASETFAKMLREGI 349

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
             P  + +  +I+     G ++EA   ++ M  L    ++     LI L+ K  ++  A  
Sbjct: 350  VPTTVTFNTMIHICGNHGQLEEAGSLMQKMEELRCPPDTRTYNILISLHAKHDNISMAAS 409

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYK 899
              + ++      D  S   ++  +S R MV++AE++   + + G E +E+T + +  MY 
Sbjct: 410  YFKRMKEARLVPDHVSYRTLLYAFSIRHMVSDAEDLVSEMDEKGLEIDEYTQSALTRMYI 469

Query: 900  RNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFR-----EMLDSLV 1064
                L +++   +R   +G M+    Y+  +  Y   G   +A   F      +ML  LV
Sbjct: 470  EAGMLEKSWLWFRRFHLMGNMSS-ECYSASIDAYGERGHILEAEKVFMSCQEGKMLTVLV 528

Query: 1065 ---------------SPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTAT 1199
                               C++ S+  +L    +P  A   L+K ++  +VS    + A 
Sbjct: 529  FNVMIKAYGLAQKYDKAYRCSYSSIIQILAGADLPDKARHYLKKMQEAGLVSDCISYCAV 588

Query: 1200 LSSVVNMG 1223
            +SS V  G
Sbjct: 589  ISSFVKFG 596


>ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g23020 gi|9294191|dbj|BAB02093.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643185|gb|AEE76706.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  497 bits (1280), Expect = e-138
 Identities = 246/410 (60%), Positives = 319/410 (77%), Gaps = 3/410 (0%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD+  +EIDE+TQS+LTRMY+EA ++++SW WF RFH  G MSSE YSANIDAYGERGY
Sbjct: 427  EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 486

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+ F CC +V K TV+E+NVMIKAYGISK  E+AC LF+SM  +G+ PDKC YN+L
Sbjct: 487  LSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASAD+P     YL +M+E G + DC+PYCAVISS+ KLG++ MA E+Y EM+ +++
Sbjct: 547  VQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNI 606

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYGVLINAFA+TGNV +A  YV  M+  G+  NSV+  SLIKLYTKVG+L EAE 
Sbjct: 607  EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEA 666

Query: 723  ACR-MLQSLETGL--DVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSM 893
              R +LQS       DVY+SNCMI+LYSERSMV +AE IF+ +K+ GEANEFT AMML M
Sbjct: 667  IYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCM 726

Query: 894  YKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPD 1073
            YK+N R  EA  IAK+MRE+ ++T+ L+YN VLG +A DGR+K+AV TF+EM+ S + PD
Sbjct: 727  YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786

Query: 1074 DCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
            D TFKSLG +L+K G+ K AV K+E+ RKK++  GL++W +TLSS+V +G
Sbjct: 787  DSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836



 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 88/415 (21%), Positives = 168/415 (40%), Gaps = 8/415 (1%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANI-DAYGERG 179
            EM  + ++    T  +L  +Y + GL   +  W  +  + G    E  +  +   Y +  
Sbjct: 212  EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271

Query: 180  YVLLAEKAF--YCCVKV-----LKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIP 338
                AE+ F  + C +      + L+   +N MI  YG S + +EA   F  M + G++P
Sbjct: 272  EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331

Query: 339  DKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELY 518
                +N+++ +                                   Y   G++     L 
Sbjct: 332  TTVTFNTMIHI-----------------------------------YGNNGQLGEVTSLM 356

Query: 519  NEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKV 698
              M  H   PD   Y +LI+   +  +++ A  Y + M++ GL  + V  ++L+  ++  
Sbjct: 357  KTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415

Query: 699  GHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHA 878
              ++EAE     +      +D Y+ + +  +Y E  M+ ++   F+R    G  +   ++
Sbjct: 416  HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475

Query: 879  MMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDS 1058
              +  Y     L EA  +    +E+   T ++ YN+++  Y      + A   F  M+  
Sbjct: 476  ANIDAYGERGYLSEAERVFICCQEVNKRT-VIEYNVMIKAYGISKSCEKACELFESMMSY 534

Query: 1059 LVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
             V+PD CT+ +L  +L    +P      LEK R+   VS    + A +SS V +G
Sbjct: 535  GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589



 Score = 82.8 bits (203), Expect = 5e-13
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
 Frame = +3

Query: 441  IDCVPYCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
            ++ + Y  ++    K  +      L++EMI   +KP    YG LI+ +++ G    A  +
Sbjct: 185  LNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCW 244

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLD------VYSSNCM 782
            +  M  +G+  + V    ++++Y K    ++AEE  +     E   D       Y+ N M
Sbjct: 245  LGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTM 304

Query: 783  IDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGL 959
            ID Y +   + EA E F+R+ + G      T   M+ +Y  N +L E   + K M+ L  
Sbjct: 305  IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHC 363

Query: 960  MTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSL 1094
              +  TYN+++  +  +   + A A F+EM D  + PD  ++++L
Sbjct: 364  APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTL 408


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331380|gb|EFH61799.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 841

 Score =  496 bits (1277), Expect = e-137
 Identities = 248/409 (60%), Positives = 318/409 (77%), Gaps = 3/409 (0%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD+  +EIDE+TQS+LTRMYIEA ++++SW WF RFH  G MSSE YSANIDAYGERGY
Sbjct: 426  EMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 485

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+ F CC +V K TVLE+NVMIKAYGISK  E+AC LF+SM  +G+ PDKC YN+L
Sbjct: 486  LSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 545

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASAD+P+ A  YL +M+E G + DC+PYCAVISS+ KLG++ MA E+Y EM+ +++
Sbjct: 546  VQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNI 605

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYGVLINAFA+TGNV +A  YV  M+  G+  NSV+  SLIKLYTKVG+L EAE 
Sbjct: 606  EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEA 665

Query: 723  ACRML--QSLETGL-DVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSM 893
              R L     ET   DVY+SNCMI+LYS+RSMV +AE IFE +K+  EANEFT AMML M
Sbjct: 666  IYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQRREANEFTFAMMLCM 725

Query: 894  YKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPD 1073
            YK+N R  EA  IAK+MRE+ ++T+ L+YN VLG YA DGR+K+AV TF+EM+ S + PD
Sbjct: 726  YKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPD 785

Query: 1074 DCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            D TFKSLG +L+K G+ K AV K+E+ RKK++  GL++W +TLSS+V +
Sbjct: 786  DSTFKSLGTILIKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGI 834



 Score =  106 bits (265), Expect = 3e-20
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 75/407 (18%)
 Frame = +3

Query: 228  KLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIV 407
            +L V+ +N+M++  G + K+     L+D M + G+ P    Y +L+ + +   L   A+ 
Sbjct: 183  ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 242

Query: 408  YLRRMQEAGLIIDCVP-----------------------------------------YCA 464
            +L +M + G+  D V                                          Y  
Sbjct: 243  WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 302

Query: 465  VISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLG 644
            +I +Y K G+++ A E +  M+   + P  + +  +I+ +   G   E T  ++TM+   
Sbjct: 303  MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMK-FH 361

Query: 645  LLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAE 824
               ++     LI L+TK   ++ A    + ++      D  S   ++  +S R MV EAE
Sbjct: 362  CAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAE 421

Query: 825  EIFERLKKNG-EANEFTHAMMLSMY------KRNWRLVEAFWIAKRMR------------ 947
            E+   +  N  E +E+T + +  MY      +++W   + F +A  M             
Sbjct: 422  ELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG 481

Query: 948  ELGLMTE---------------LLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
            E G ++E               +L YN+++  Y      + A   F  M+   V+PD CT
Sbjct: 482  ERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 541

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
            + +L  +L    +P  A   LEK R+   VS    + A +SS V +G
Sbjct: 542  YNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLG 588



 Score =  100 bits (248), Expect = 3e-18
 Identities = 97/416 (23%), Positives = 182/416 (43%), Gaps = 9/416 (2%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGR-------MSSECYSANID 161
            +M +  M+ DE T   + +MY +A    ++  +F ++  +         +SS  Y+  ID
Sbjct: 246  KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 305

Query: 162  AYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIP 338
             YG+ G +  A + F   ++  +  T + FN MI  YG + +F E   L  +M  H   P
Sbjct: 306  TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFH-CAP 364

Query: 339  DKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELY 518
            D   YN L+ +    +  E A  Y + M+ AGL  D V Y  ++ +++    V+ A EL 
Sbjct: 365  DTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELI 424

Query: 519  NEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKV 698
             EM  +DV+ D      L   + E   ++++  + +     G  M+S    + I  Y + 
Sbjct: 425  AEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGN-MSSEGYSANIDAYGER 483

Query: 699  GHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEA-NEFTH 875
            G+L EAE      Q +     V   N MI  Y       +A E+FE +   G   ++ T+
Sbjct: 484  GYLSEAERVFICCQEVNKRT-VLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 542

Query: 876  AMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLD 1055
              ++ +        +A    ++MRE G +++ + Y  V+  +   G+   A   ++EM++
Sbjct: 543  NTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 602

Query: 1056 SLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
              + PD   +  L       G  + A+  +E  ++  +     ++ + +     +G
Sbjct: 603  YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVG 658


>ref|XP_006300104.1| hypothetical protein CARUB_v10016333mg [Capsella rubella]
            gi|482568813|gb|EOA33002.1| hypothetical protein
            CARUB_v10016333mg [Capsella rubella]
          Length = 850

 Score =  491 bits (1264), Expect = e-136
 Identities = 244/409 (59%), Positives = 316/409 (77%), Gaps = 3/409 (0%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD+  +EIDE+TQS+LTRMY+EA ++++SW WF RFH  G MSSE YSANIDAYGERGY
Sbjct: 435  EMDDNNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHIAGNMSSEGYSANIDAYGERGY 494

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+ F CC +V K TV+E+NVMIKAYGISK  E+AC LF+SM  +G+ PDKC YN+L
Sbjct: 495  ISEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACVLFESMMCYGVTPDKCTYNTL 554

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASAD+P  A  YL +M+E G + DC+PYCAVISS+ KLG++ MA E+Y EM+ + +
Sbjct: 555  VQILASADMPHKARCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYYI 614

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+V+GVLINAFA+TGNV +A  YV  M+  G+  NSV+  SLIKLYTKVG+L EAE 
Sbjct: 615  EPDVVVFGVLINAFADTGNVQQAMSYVEAMKKAGIPGNSVIHNSLIKLYTKVGYLNEAEA 674

Query: 723  ACR-MLQSLETGL--DVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSM 893
              R +LQS       DVY+SNCMI+LYSERSMV +AE IFE +K+  EANEFT AMML M
Sbjct: 675  IYRELLQSCNKAQYPDVYTSNCMINLYSERSMVRKAEAIFENMKQRREANEFTFAMMLCM 734

Query: 894  YKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPD 1073
            YK+N R  EA  IAK+MRE+ ++T+ L+YN VLG YA DGR+K+AV TF+EM+ S + PD
Sbjct: 735  YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGLQPD 794

Query: 1074 DCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            D TFKSLG +L+K G+ K AV K+E+ R+ ++  GL++W +TLSS+V +
Sbjct: 795  DSTFKSLGTILMKLGMSKKAVRKIEEIRRNEIKRGLELWISTLSSLVGI 843



 Score =  102 bits (253), Expect = 8e-19
 Identities = 91/416 (21%), Positives = 168/416 (40%), Gaps = 84/416 (20%)
 Frame = +3

Query: 228  KLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIV 407
            +L V+ +N+M++  G + K+     L+D M + G+ P    Y +L+ + +   L   A+ 
Sbjct: 183  ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 242

Query: 408  YLRRMQEAGLIIDCVP-------------------------------------------- 455
            +L +M + G+  D V                                             
Sbjct: 243  WLGKMSKIGMQPDEVTTGIVLQMYKKAKEFQKAEEFFKKWSCDKSFGMLSMTDNKVDSHV 302

Query: 456  ------YCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATY 617
                  Y  +I +Y K G+++ A+E +  M+   + P  + +  +I+ +   G + E T 
Sbjct: 303  CLSSYTYNTMIDTYGKSGQIKEALETFKRMLDEGIVPTTVTFNTMIHIYGNNGQLGEVTS 362

Query: 618  YVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYS 797
             ++TM+ L    ++     LI L+TK   ++ A    + ++      D  S   ++  +S
Sbjct: 363  LMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDAGLKPDPVSYRTLLYAFS 421

Query: 798  ERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY------KRNWRLVEAFWIAKRMR--- 947
             R MV EAE +   +  N  E +E+T + +  MY      +++W   + F IA  M    
Sbjct: 422  IRHMVEEAEGLIAEMDDNNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHIAGNMSSEG 481

Query: 948  ---------ELGLMTE---------------LLTYNLVLGFYASDGRYKDAVATFREMLD 1055
                     E G ++E               ++ YN+++  Y      + A   F  M+ 
Sbjct: 482  YSANIDAYGERGYISEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACVLFESMMC 541

Query: 1056 SLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
              V+PD CT+ +L  +L    +P  A   LEK R+   VS    + A +SS V +G
Sbjct: 542  YGVTPDKCTYNTLVQILASADMPHKARCYLEKMRETGYVSDCIPYCAVISSFVKLG 597


>ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297308804|gb|EFH39266.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 842

 Score =  486 bits (1251), Expect = e-134
 Identities = 245/409 (59%), Positives = 315/409 (77%), Gaps = 3/409 (0%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD+  +EIDE+TQS+LTRMYIEA ++++SW WF R H  G MSSE YSANIDAYGERGY
Sbjct: 427  EMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFRRVHVAGNMSSEGYSANIDAYGERGY 486

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
            +  AE+ F CC +V K TVLE+NVMIKAYGISK  E+AC LF+SM  +G+ PDKC YN+L
Sbjct: 487  LSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            VQ+LASAD+P+ A  YL +M+E G + DC+PYCAVISS+ KLG++ MA E+Y EM+ +++
Sbjct: 547  VQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNI 606

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDV+VYGVLINAFA+TGNV +A  YV  M+  G+  NSV+  SLIKLYTKVG+L EAE 
Sbjct: 607  EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEA 666

Query: 723  ACRML--QSLETGL-DVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSM 893
              R L     ET   DVY+S+CM +L SERSMV +AE IFE +K+  EANEFT AMML M
Sbjct: 667  IYRKLLRSCNETQYPDVYTSHCMNNLCSERSMVRKAEAIFESMKQRREANEFTFAMMLCM 726

Query: 894  YKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPD 1073
            YK+N R  EA  IAK+MRE+ ++T+ L+YN VLG YA DGR+K+AV TF+EM+ S + PD
Sbjct: 727  YKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPD 786

Query: 1074 DCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNM 1220
            D TFKSLG +L+K G+ K AV K+E+ RKK++  GL++W +TLSS+V +
Sbjct: 787  DSTFKSLGTILIKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGI 835



 Score =  104 bits (260), Expect = 1e-19
 Identities = 97/430 (22%), Positives = 172/430 (40%), Gaps = 75/430 (17%)
 Frame = +3

Query: 159  DAYGERGYVLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIP 338
            DA GE G      K+  C     +L V+ +N+M++  G + K+     L+D M + G+ P
Sbjct: 165  DAVGESGGDFEWFKSKGC----YELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKP 220

Query: 339  DKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVP--------------------- 455
                Y +L+ + +   L   A+ +L +M + G+  D V                      
Sbjct: 221  INSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFF 280

Query: 456  --------------------YCAVISSYAKLGRVEMAVELYNEMISHDVKPDVIVYGVLI 575
                                Y  +I +Y K G+++ A E +  M+   + P  + +  +I
Sbjct: 281  KKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI 340

Query: 576  NAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETG 755
            + +   G   E T  ++TM+      ++     LI L+TK   ++ A    + ++     
Sbjct: 341  HVYGNNGQFGEVTSLMKTMK-FHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLK 399

Query: 756  LDVYSSNCMIDLYSERSMVAEAEEIFERLKKNG-EANEFTHAMMLSMY------KRNWRL 914
             D  S   ++  +S R MV EAEE+   +  N  E +E+T + +  MY      +++W  
Sbjct: 400  PDPVSYRTLLYAFSIRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSW 459

Query: 915  VEAFWIAKRMR------------ELGLMTE---------------LLTYNLVLGFYASDG 1013
                 +A  M             E G ++E               +L YN+++  Y    
Sbjct: 460  FRRVHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISK 519

Query: 1014 RYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWT 1193
              + A   F  M+   V+PD CT+ +L  +L    +P  A   LEK R+   VS    + 
Sbjct: 520  SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYC 579

Query: 1194 ATLSSVVNMG 1223
            A +SS V +G
Sbjct: 580  AVISSFVKLG 589



 Score =  101 bits (252), Expect = 1e-18
 Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 9/416 (2%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGR-------MSSECYSANID 161
            +M +  M+ DE T   + +MY +A    ++  +F ++  +         +SS  Y+  ID
Sbjct: 247  KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306

Query: 162  AYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIP 338
             YG+ G +  A + F   ++  +  T + FN MI  YG + +F E   L  +M  H   P
Sbjct: 307  TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFH-CAP 365

Query: 339  DKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELY 518
            D   YN L+ +    +  E A  Y + M+ AGL  D V Y  ++ +++    V+ A EL 
Sbjct: 366  DTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELI 425

Query: 519  NEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKV 698
             EM  +DV+ D      L   + E   ++++  + R +   G  M+S    + I  Y + 
Sbjct: 426  AEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFRRVHVAGN-MSSEGYSANIDAYGER 484

Query: 699  GHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEA-NEFTH 875
            G+L EAE      Q +     V   N MI  Y       +A E+FE +   G   ++ T+
Sbjct: 485  GYLSEAERVFICCQEVNKRT-VLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543

Query: 876  AMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLD 1055
              ++ +        +A    ++MRE G +++ + Y  V+  +   G+   A   ++EM++
Sbjct: 544  NTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603

Query: 1056 SLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLSSVVNMG 1223
              + PD   +  L       G  + A+  +E  ++  +     ++ + +     +G
Sbjct: 604  YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659


>ref|XP_007148598.1| hypothetical protein PHAVU_006G222000g [Phaseolus vulgaris]
            gi|561021821|gb|ESW20592.1| hypothetical protein
            PHAVU_006G222000g [Phaseolus vulgaris]
          Length = 804

 Score =  483 bits (1244), Expect = e-133
 Identities = 242/401 (60%), Positives = 300/401 (74%)
 Frame = +3

Query: 3    EMDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRFHREGRMSSECYSANIDAYGERGY 182
            EMD R + IDEFTQS+LTRMY+E+G++++SWLWF RFH  G +SS CYSANIDAYGERGY
Sbjct: 393  EMDARNLAIDEFTQSALTRMYVESGMLEQSWLWFTRFHIAGYISSGCYSANIDAYGERGY 452

Query: 183  VLLAEKAFYCCVKVLKLTVLEFNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSL 362
             L AEK F CC +  KLTVLEFNVMIKAYGI K +++AC LFD M + G++ DKC Y+SL
Sbjct: 453  TLEAEKVFLCCKEKKKLTVLEFNVMIKAYGIGKCYDKACQLFDCMKKFGVVADKCSYSSL 512

Query: 363  VQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSYAKLGRVEMAVELYNEMISHDV 542
            + +LASAD P  A  YL RMQ+AGL+ DCVPYC VI S+ KLG+++MA ELY EM+ + V
Sbjct: 513  IHILASADKPHDAKSYLERMQDAGLVSDCVPYCVVIKSFVKLGQLKMAEELYEEMLGYAV 572

Query: 543  KPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEE 722
            +PDVI+YGV INAFA+TG+V EA  YV  M+  GL  N  +  SLIKLYTKVG+LKEAEE
Sbjct: 573  QPDVIIYGVFINAFADTGSVKEAINYVNEMQKAGLQGNLTIYNSLIKLYTKVGYLKEAEE 632

Query: 723  ACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKR 902
              ++LQS   G  ++SSNCMIDLY+ER MV +A+EIFE LKKN  ANEF++AMML MYK+
Sbjct: 633  TYKLLQSSGEGPSIFSSNCMIDLYTERLMVEQAKEIFESLKKNEVANEFSYAMMLCMYKK 692

Query: 903  NWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGRYKDAVATFREMLDSLVSPDDCT 1082
              RL EA  IA +MR L L+T++L+YN VLG Y+ D R +DA  TF EM+ S + PDD T
Sbjct: 693  IGRLDEAIQIATQMRRLALLTDVLSYNNVLGLYSMDRRLRDATETFNEMIKSGIQPDDFT 752

Query: 1083 FKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTATLS 1205
            F++L  +LL CGV K AV +LE   K+D   GLQ W   LS
Sbjct: 753  FRALANILLNCGVSKGAVGRLEVMVKRDAHHGLQGWMLALS 793



 Score =  111 bits (278), Expect = 1e-21
 Identities = 98/429 (22%), Positives = 186/429 (43%), Gaps = 23/429 (5%)
 Frame = +3

Query: 6    MDERRMEIDEFTQSSLTRMYIEAGLIDESWLWFLRF---------------------HRE 122
            M  + ME DE T   +  +Y  AG   ++  +F R+                     H  
Sbjct: 199  MQSQGMEPDEVTMGIIVLLYKRAGEFRKAEEFFRRWIRGASFRLGVNHNFSVDDKGSHAN 258

Query: 123  GRMSSECYSANIDAYGERGYVLLAEKAFYCCVKV-LKLTVLEFNVMIKAYGISKKFEEAC 299
              +SS  Y+  I+ YG+ G      + F   ++  + L  +  N+MI  YG   + ++AC
Sbjct: 259  VCLSSNTYNTLINTYGKGGQFRAVCETFARMIRQGIALNTVTLNLMIHLYGNCGRLQQAC 318

Query: 300  FLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRMQEAGLIIDCVPYCAVISSY 479
             LF  M +   +PD   YN L+      +    A  YL RM++A L  D + Y  ++ +Y
Sbjct: 319  LLFQKMGEFRCLPDTWTYNILISAHIKNNNVNIAAKYLARMKQACLEPDILSYRILLYAY 378

Query: 480  AKLGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYYVRTMRNLGLLMNS 659
            +    V+ A EL  EM + ++  D      L   + E+G ++++  +       G + +S
Sbjct: 379  STRKMVQEAEELVREMDARNLAIDEFTQSALTRMYVESGMLEQSWLWFTRFHIAGYI-SS 437

Query: 660  VVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSERSMVAEAEEIFER 839
                + I  Y + G+  EAE+     +  +  L V   N MI  Y       +A ++F+ 
Sbjct: 438  GCYSANIDAYGERGYTLEAEKVFLCCKE-KKKLTVLEFNVMIKAYGIGKCYDKACQLFDC 496

Query: 840  LKKNG-EANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTYNLVLGFYASDGR 1016
            +KK G  A++ +++ ++ +     +  +A    +RM++ GL+++ + Y +V+  +   G+
Sbjct: 497  MKKFGVVADKCSYSSLIHILASADKPHDAKSYLERMQDAGLVSDCVPYCVVIKSFVKLGQ 556

Query: 1017 YKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRKKDMVSGLQMWTA 1196
             K A   + EML   V PD   +          G  K A+  + + +K  +   L ++ +
Sbjct: 557  LKMAEELYEEMLGYAVQPDVIIYGVFINAFADTGSVKEAINYVNEMQKAGLQGNLTIYNS 616

Query: 1197 TLSSVVNMG 1223
             +     +G
Sbjct: 617  LIKLYTKVG 625



 Score = 69.3 bits (168), Expect = 6e-09
 Identities = 77/381 (20%), Positives = 139/381 (36%), Gaps = 55/381 (14%)
 Frame = +3

Query: 246  FNVMIKAYGISKKFEEACFLFDSMDQHGLIPDKCGYNSLVQMLASADLPETAIVYLRRM- 422
            +  +I  Y      EEA      M   G+ PD+     +V +   A     A  + RR  
Sbjct: 176  YGTLIDVYSKGGLKEEALAWLQRMQSQGMEPDEVTMGIIVLLYKRAGEFRKAEEFFRRWI 235

Query: 423  -------------------QEAGLIIDCVPYCAVISSYAK-------------------- 485
                                 A + +    Y  +I++Y K                    
Sbjct: 236  RGASFRLGVNHNFSVDDKGSHANVCLSSNTYNTLINTYGKGGQFRAVCETFARMIRQGIA 295

Query: 486  ---------------LGRVEMAVELYNEMISHDVKPDVIVYGVLINAFAETGNVDEATYY 620
                            GR++ A  L+ +M      PD   Y +LI+A  +  NV+ A  Y
Sbjct: 296  LNTVTLNLMIHLYGNCGRLQQACLLFQKMGEFRCLPDTWTYNILISAHIKNNNVNIAAKY 355

Query: 621  VRTMRNLGLLMNSVVLKSLIKLYTKVGHLKEAEEACRMLQSLETGLDVYSSNCMIDLYSE 800
            +  M+   L  + +  + L+  Y+    ++EAEE  R + +    +D ++ + +  +Y E
Sbjct: 356  LARMKQACLEPDILSYRILLYAYSTRKMVQEAEELVREMDARNLAIDEFTQSALTRMYVE 415

Query: 801  RSMVAEAEEIFERLKKNGEANEFTHAMMLSMYKRNWRLVEAFWIAKRMRELGLMTELLTY 980
              M+ ++   F R    G  +   ++  +  Y      +EA  +    +E   +T +L +
Sbjct: 416  SGMLEQSWLWFTRFHIAGYISSGCYSANIDAYGERGYTLEAEKVFLCCKEKKKLT-VLEF 474

Query: 981  NLVLGFYASDGRYKDAVATFREMLDSLVSPDDCTFKSLGIVLLKCGVPKSAVEKLEKTRK 1160
            N+++  Y     Y  A   F  M    V  D C++ SL  +L     P  A   LE+ + 
Sbjct: 475  NVMIKAYGIGKCYDKACQLFDCMKKFGVVADKCSYSSLIHILASADKPHDAKSYLERMQD 534

Query: 1161 KDMVSGLQMWTATLSSVVNMG 1223
              +VS    +   + S V +G
Sbjct: 535  AGLVSDCVPYCVVIKSFVKLG 555